Download magetabcheck-1.7-sources.jar
magetabcheck/magetabcheck-1.7-sources.jar.zip( 144 k)
The download jar file contains the following class files or Java source files.
META-INF/MANIFEST.MF
MageTabCheck-default.properties
log4j.xml
uk.ac.ebi.fg.annotare2.magetabcheck.CheckListGenerator.java
uk.ac.ebi.fg.annotare2.magetabcheck.CheckerModule.java
uk.ac.ebi.fg.annotare2.magetabcheck.MageTabCheckProperties.java
uk.ac.ebi.fg.annotare2.magetabcheck.MageTabChecker.java
uk.ac.ebi.fg.annotare2.magetabcheck.ServiceUnavailableException.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.AbstractCheckRunner.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.AllChecks.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.AllChecksImpl.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckApplicationType.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckDefinition.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckListProvider.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckModality.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckPosition.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckPositionKeeper.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckResult.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckResultStatus.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckResultType.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckRunner.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.Checker.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.CheckerFactory.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.ClassBasedCheckDefinition.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.ClassBasedCheckRunner.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.ClassInstanceProvider.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.ExperimentType.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.MethodBasedCheckDefinition.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.MethodBasedCheckRunner.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.UknownExperimentTypeException.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.annotation.Check.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.annotation.Context.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.annotation.MageTabCheck.java
uk.ac.ebi.fg.annotare2.magetabcheck.checker.annotation.Visit.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.EmptyRangeCheck.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.NonEmptyRangeCheck.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.RangeCheck.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.AeExperimentTypeCommentRequired.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.AtLeastOneContactMustBeSubmitter.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.AtLeastOneContactWithEmailRequired.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.AtLeastOneContactWithRolesRequired.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.AtLeastOneSubmitterMustHaveEmail.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.IdfConstants.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.IdfSimpleChecks.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.LibraryConstructionProtocolRequired.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.ListOfContactsMustBeNonEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.ListOfExperimentalDesignsShouldBeNonEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.ListOfExperimentalFactorsMustBeNonEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.ListOfNormalizationTypesShouldBeNonEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.ListOfProtocolsMustBeNonEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.ListOfQualityControlTypesShouldBeNonEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.ListOfReplicateTypesShouldBeNonEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.SequencingProtocolRequired.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.idf.TermSourcesMustBeUniqueByName.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.matchers.IsDateString.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.matchers.IsValidFileLocation.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.matchers.RegExpMatcher.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.sdrf.FactorValuesMustVary.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.sdrf.ListOfArrayDesignAttributesMustBeEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.sdrf.ListOfLabeledExtractNodesMustBeEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.sdrf.ListOfScanNodesMustNotBeEmpty.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.sdrf.NumberOfUniqueLabelsNotGraterThanChannels.java
uk.ac.ebi.fg.annotare2.magetabcheck.checks.sdrf.SdrfSimpleChecks.java
uk.ac.ebi.fg.annotare2.magetabcheck.efo.MageTabCheckEfo.java
uk.ac.ebi.fg.annotare2.magetabcheck.efo.MageTabCheckEfoImpl.java
uk.ac.ebi.fg.annotare2.magetabcheck.extension.KnownProtocolHardware.java
uk.ac.ebi.fg.annotare2.magetabcheck.extension.KnownTermSource.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.Cell.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.Experiment.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.FileLocation.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.Identity.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.Comment.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.ExperimentalDesign.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.ExperimentalFactor.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.ExperimentalFactorType.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.IdfData.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.Info.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.NormalizationType.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.Person.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.Protocol.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.ProtocolType.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.Publication.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.PublicationStatus.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.QualityControlType.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.ReplicateType.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.Term.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.TermList.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.idf.TermSource.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.HasAttributes.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.HasLocation.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.HasTermSource.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfArrayDataMatrixNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfArrayDataNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfArrayDesignAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfAssayNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfCharacteristicAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfDataNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfDerivedArrayDataMatrixNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfDerivedArrayDataNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfExtractNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfFactorValueAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfGraph.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfGraphAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfGraphEntity.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfGraphNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfLabelAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfLabeledExtractNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfMaterialNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfMaterialTypeAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfNormalizationNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfParameterValueAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfPerformerAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfProtocolNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfProviderAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfSampleNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfScanNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfSourceNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfTechnologyTypeAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.model.sdrf.SdrfUnitAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.LimpopoBasedChecker.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.LimpopoBasedExperiment.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.ResultLogger.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.IdfHelper.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.IdfTags.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedComment.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedExperimentalDesign.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedExperimentalFactor.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedIdfObject.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedInfo.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedNormalizationType.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedPerson.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedProtocol.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedPublication.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedQualityControlType.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedReplicateType.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoBasedTermSource.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.idf.LimpopoIdfDataProxy.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedArrayDataMatrixNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedArrayDataNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedArrayDesignAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedAssayNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedCharacteristicAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedDerivedArrayDataMatrixNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedDerivedArrayDataNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedExtractNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedFactorValueAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedHybridizationNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedLabelAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedLabeledExtractNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedMaterialNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedMaterialTypeAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedNormalizationNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedParameterValueAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedPerformerAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedProtocolNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedProviderAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedSampleNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedScanNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedSdrfAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedSdrfGraph.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedSdrfNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedSourceNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedTechnologyTypeAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedUnitAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedUnknownAttribute.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.LimpopoBasedUnknownNode.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.ObjectWithAttributes.java
uk.ac.ebi.fg.annotare2.magetabcheck.modelimpl.limpopo.sdrf.SdrfHelper.java
uk.ac.ebi.fg.annotare2.magetabcheck.utils.Urls.java
uk.ac.ebi.fg.annotare2.services.efo.ClassAnnotationVisitor.java
uk.ac.ebi.fg.annotare2.services.efo.EfoDag.java
uk.ac.ebi.fg.annotare2.services.efo.EfoLoader.java
uk.ac.ebi.fg.annotare2.services.efo.EfoNode.java
uk.ac.ebi.fg.annotare2.services.efo.EfoNodeImpl.java
uk.ac.ebi.fg.annotare2.services.efo.EfoService.java
uk.ac.ebi.fg.annotare2.services.efo.EfoServiceImpl.java
uk.ac.ebi.fg.annotare2.services.efo.EfoServiceProperties.java
uk.ac.ebi.fg.annotare2.services.efo.EfoServiceProvider.java
uk.ac.ebi.fg.annotare2.services.efo.EfoTerm.java
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