Ensembl Data Access Module v1.09
© Roslin Institute 2010. GNU General Public License, version3
uk.ac.roslin.ensembl.dao.database.coreaccess
Class DBAssemblyDAO
java.lang.Object
uk.ac.roslin.ensembl.dao.database.DBBaseDAO
uk.ac.roslin.ensembl.dao.database.coreaccess.DBCoreObjectDAO
uk.ac.roslin.ensembl.dao.database.coreaccess.DBAssemblyDAO
- All Implemented Interfaces:
- uk.ac.roslin.ensembl.dao.coreaccess.AssemblyDAO
public class DBAssemblyDAO
- extends DBCoreObjectDAO
- implements uk.ac.roslin.ensembl.dao.coreaccess.AssemblyDAO
- Author:
- paterson
Constructor Summary |
DBAssemblyDAO()
|
DBAssemblyDAO(uk.ac.roslin.ensembl.dao.factory.DAOCollectionCoreFactory factory)
|
DBAssemblyDAO(uk.ac.roslin.ensembl.dao.factory.DAOSingleSpeciesCoreFactory factory)
|
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
DBAssemblyDAO
public DBAssemblyDAO()
DBAssemblyDAO
public DBAssemblyDAO(uk.ac.roslin.ensembl.dao.factory.DAOSingleSpeciesCoreFactory factory)
DBAssemblyDAO
public DBAssemblyDAO(uk.ac.roslin.ensembl.dao.factory.DAOCollectionCoreFactory factory)
getComponentMappingsByStartStop
public uk.ac.roslin.ensembl.model.MappingSet getComponentMappingsByStartStop(uk.ac.roslin.ensembl.model.core.DNASequence assembledSequence,
Integer begin,
Integer stop)
throws uk.ac.roslin.ensembl.exception.DAOException
- Specified by:
getComponentMappingsByStartStop
in interface uk.ac.roslin.ensembl.dao.coreaccess.AssemblyDAO
- Throws:
uk.ac.roslin.ensembl.exception.DAOException
Ensembl Data Access Module v1.09
© Roslin Institute 2010. GNU General Public License, version3