Ensembl Model v1.09
© Roslin Institute 2010. GNU General Public License, version3
Ensembl Model
v1.09

uk.ac.roslin.ensembl.model.core
Interface Gene

All Superinterfaces:
Feature, IdentifiableObject, MappableObject, Serializable

public interface Gene
extends Feature


Method Summary
 Analysis getAnalysis()
           
 String getBiotype()
           
 Transcript getCanonicalTranscript()
           
 Translation getCanonicalTranslation()
           
 String getDescription()
           
 List<? extends HomologyPairRelationship> getHomologies()
           
 List<? extends HomologyPairRelationship> getHomologies(EnsemblComparaDivision speciesGroup)
           
 List<? extends HomologyPairRelationship> getHomologies(EnsemblComparaDivision speciesGroup, Species sp)
           
 List<? extends HomologyPairRelationship> getHomologies(Species sp)
           
 List<? extends HomologyPairRelationship> getHomologiesWithoutLazyLoad()
           
 Collection<? extends Transcript> getTranscripts()
           
 
Methods inherited from interface uk.ac.roslin.ensembl.model.core.Feature
addMappedObjectType, getChromosomeMapping, isCurrent, isObjectTypeMapped
 
Methods inherited from interface uk.ac.roslin.ensembl.model.MappableObject
addMapping, clearAllMappings, getMappings, getMappings
 
Methods inherited from interface uk.ac.roslin.ensembl.model.IdentifiableObject
getDBVersion, getHashID, getId, getSchemaVersion, getType, setId
 

Method Detail

getDescription

String getDescription()

getAnalysis

Analysis getAnalysis()

getBiotype

String getBiotype()

getCanonicalTranscript

Transcript getCanonicalTranscript()

getCanonicalTranslation

Translation getCanonicalTranslation()

getTranscripts

Collection<? extends Transcript> getTranscripts()

getHomologies

List<? extends HomologyPairRelationship> getHomologies()

getHomologies

List<? extends HomologyPairRelationship> getHomologies(Species sp)

getHomologies

List<? extends HomologyPairRelationship> getHomologies(EnsemblComparaDivision speciesGroup)

getHomologies

List<? extends HomologyPairRelationship> getHomologies(EnsemblComparaDivision speciesGroup,
                                                       Species sp)

getHomologiesWithoutLazyLoad

List<? extends HomologyPairRelationship> getHomologiesWithoutLazyLoad()

Ensembl Model
v1.09

Ensembl Model v1.09
© Roslin Institute 2010. GNU General Public License, version3