Ensembl Data Access Interface v1.09
© Roslin Institute 2010. GNU General Public License, version3
uk.ac.roslin.ensembl.dao.compara
Interface HomologyDAO
public interface HomologyDAO
Method Summary |
List<? extends uk.ac.roslin.ensembl.model.compara.HomologyPairRelationship> |
getHomologiesForGene(uk.ac.roslin.ensembl.model.core.Gene g)
|
HashMap<? extends uk.ac.roslin.ensembl.model.core.DNASequence,? extends uk.ac.roslin.ensembl.model.MappingSet> |
getRegionsOfConservedSynteny(uk.ac.roslin.ensembl.model.core.Chromosome source,
uk.ac.roslin.ensembl.model.Coordinate range,
uk.ac.roslin.ensembl.model.core.Species target)
|
getHomologiesForGene
List<? extends uk.ac.roslin.ensembl.model.compara.HomologyPairRelationship> getHomologiesForGene(uk.ac.roslin.ensembl.model.core.Gene g)
throws uk.ac.roslin.ensembl.exception.DAOException
- Throws:
uk.ac.roslin.ensembl.exception.DAOException
getRegionsOfConservedSynteny
HashMap<? extends uk.ac.roslin.ensembl.model.core.DNASequence,? extends uk.ac.roslin.ensembl.model.MappingSet> getRegionsOfConservedSynteny(uk.ac.roslin.ensembl.model.core.Chromosome source,
uk.ac.roslin.ensembl.model.Coordinate range,
uk.ac.roslin.ensembl.model.core.Species target)
throws uk.ac.roslin.ensembl.exception.DAOException
- Throws:
uk.ac.roslin.ensembl.exception.DAOException
Ensembl Data Access Interface v1.09
© Roslin Institute 2010. GNU General Public License, version3