|
Ensembl Model v1.09 |
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |
java.lang.Objectuk.ac.roslin.ensembl.config.EnsemblType
uk.ac.roslin.ensembl.config.EnsemblDBType
public class EnsemblDBType
Concrete implementation of DatabaseType interface for representing static Ensembl DatabaseTypes. Implements static strings representing each of the current enesmbl database types, and concrete DatabaseTypes for each of these string types.
Field Summary | |
---|---|
static EnsemblDBType |
ancestral
A concrete instantiation of an DatabaseType object representing the ensembl ancestral database sType |
static EnsemblDBType |
cdna
A concrete instantiation of an DatabaseType object representing the ensembl species cDNA database sType |
static EnsemblDBType |
collection_core
A concrete instantiation of an DatabaseType object representing the ensemblgenomes collection core database sType |
static EnsemblDBType |
collection_funcgen
A concrete instantiation of an DatabaseType object representing the ensemblgenomes collection funcgen database sType |
static EnsemblDBType |
collection_variation
A concrete instantiation of an DatabaseType object representing the ensemblgenomes collection variation database sType |
static EnsemblDBType |
compara
A concrete instantiation of an DatabaseType object representing the ensembl compara database sType |
static EnsemblDBType |
core
A concrete instantiation of an DatabaseType object representing the ensembl species core database sType |
static EnsemblDBType |
coreexpressionest
A concrete instantiation of an DatabaseType object representing the ensembl species coreexpressioncdna database sType |
static EnsemblDBType |
coreexpressiongnf
A concrete instantiation of an DatabaseType object representing the ensembl species coreexpressiongnf database sType |
static EnsemblDBType |
funcgen
A concrete instantiation of an DatabaseType object representing the ensembl species funcgen database sType |
static EnsemblDBType |
go
A concrete instantiation of an DatabaseType object representing the ensembl go database sType |
static EnsemblDBType |
ontology
A concrete instantiation of an DatabaseType object representing the ensembl ontology database sType |
static EnsemblDBType |
otherfeatures
A concrete instantiation of an DatabaseType object representing the ensembl species otherfeatures database sType |
static EnsemblDBType |
variation
A concrete instantiation of an DatabaseType object representing the ensembl species variation database sType |
static EnsemblDBType |
vega
A concrete instantiation of an DatabaseType object representing the ensembl species vega database sType |
static EnsemblDBType |
website
A concrete instantiation of an DatabaseType object representing the ensembl website database sType |
Fields inherited from class uk.ac.roslin.ensembl.config.EnsemblType |
---|
label |
Method Summary | |
---|---|
int |
compareTo(EnsemblDBType other)
|
boolean |
equals(Object obj)
Overrides the Object method to test for equality |
static Collection<EnsemblDBType> |
getAllDatabaseTypes()
|
static TreeSet<EnsemblDBType> |
getCollectionDatabaseTypes()
|
static EnsemblDBType |
getDBTypeForName(String typeName)
Public Method to return the static EnsemblDBType for a typeName. |
static TreeSet<EnsemblDBType> |
getSingleSpeciesDatabaseTypes()
|
static TreeSet<EnsemblDBType> |
getSpeciesComparisonDatabaseTypes()
|
int |
hashCode()
Overrides Object method to generate a hashCode |
String |
toString()
We often use the constants in a String context, so this routine allows us to do that easily |
Methods inherited from class java.lang.Object |
---|
clone, finalize, getClass, notify, notifyAll, wait, wait, wait |
Field Detail |
---|
public static EnsemblDBType cdna
public static EnsemblDBType core
public static EnsemblDBType coreexpressionest
public static EnsemblDBType coreexpressiongnf
public static EnsemblDBType funcgen
public static EnsemblDBType otherfeatures
public static EnsemblDBType variation
public static EnsemblDBType vega
public static EnsemblDBType ancestral
public static EnsemblDBType compara
public static EnsemblDBType go
public static EnsemblDBType ontology
public static EnsemblDBType website
public static EnsemblDBType collection_core
public static EnsemblDBType collection_funcgen
public static EnsemblDBType collection_variation
Method Detail |
---|
public String toString()
toString
in class EnsemblType
public boolean equals(Object obj)
equals
in class Object
obj
- the reference object with which to compare.
true
if this object is the same as the obj
argument; false
otherwise.public int hashCode()
hashCode
in class Object
public static EnsemblDBType getDBTypeForName(String typeName)
typeName
- String
public static TreeSet<EnsemblDBType> getSpeciesComparisonDatabaseTypes()
public static TreeSet<EnsemblDBType> getSingleSpeciesDatabaseTypes()
public static TreeSet<EnsemblDBType> getCollectionDatabaseTypes()
public static Collection<EnsemblDBType> getAllDatabaseTypes()
public int compareTo(EnsemblDBType other)
compareTo
in interface Comparable<EnsemblDBType>
|
Ensembl Model v1.09 |
|||||||||
PREV CLASS NEXT CLASS | FRAMES NO FRAMES | |||||||||
SUMMARY: NESTED | FIELD | CONSTR | METHOD | DETAIL: FIELD | CONSTR | METHOD |