Ensembl Model v1.09
© Roslin Institute 2010. GNU General Public License, version3
Ensembl Model
v1.09

uk.ac.roslin.ensembl.model.core
Interface Assembly


public interface Assembly

Author:
paterson

Method Summary
 Integer getAssemblyStart()
           
 Integer getAssemblyStop()
           
 MappingSet getMappings()
           
 AssembledDNASequence getParent()
           
 MappingSet getStitchedMappings()
           
 void setAssemblyStart(Integer assemblyStart)
           
 void setAssemblyStop(Integer assemblyStop)
           
 void setParent(AssembledDNASequence parent)
           
 

Method Detail

getParent

AssembledDNASequence getParent()

setParent

void setParent(AssembledDNASequence parent)

getAssemblyStart

Integer getAssemblyStart()

setAssemblyStart

void setAssemblyStart(Integer assemblyStart)

getAssemblyStop

Integer getAssemblyStop()

setAssemblyStop

void setAssemblyStop(Integer assemblyStop)

getMappings

MappingSet getMappings()
                       throws DAOException
Throws:
DAOException

getStitchedMappings

MappingSet getStitchedMappings()
                               throws DAOException
Throws:
DAOException

Ensembl Model
v1.09

Ensembl Model v1.09
© Roslin Institute 2010. GNU General Public License, version3