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Ensembl Model v1.09 |
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Packages that use Gene | |
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uk.ac.roslin.ensembl.model.compara | |
uk.ac.roslin.ensembl.model.core |
Uses of Gene in uk.ac.roslin.ensembl.model.compara |
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Classes in uk.ac.roslin.ensembl.model.compara with type parameters of type Gene | |
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interface |
HomologyPairRelationship<CLAZZ extends Gene>
extends HomologyRelationship for those Relationships that are binary |
interface |
HomologyRelationship<CLAZZ extends Gene>
Ensembl schema and PerlAPI claims that homology relationships are not necessarily only binary, i.e. the could have more than two members. |
Uses of Gene in uk.ac.roslin.ensembl.model.core |
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Methods in uk.ac.roslin.ensembl.model.core that return Gene | |
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Gene |
Transcript.getGene()
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Gene |
Species.getGeneByID(Integer id)
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Gene |
Species.getGeneByID(Integer id,
String dbVersion)
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Gene |
Species.getGeneByStableID(String stableID)
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Gene |
Species.getGeneByStableID(String stableID,
String dbVersion)
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Methods in uk.ac.roslin.ensembl.model.core that return types with arguments of type Gene | |
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List<? extends Gene> |
DNASequence.getGenesOnRegion(Coordinate coord)
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List<? extends Gene> |
DNASequence.getGenesOnRegion(Integer start,
Integer stop)
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List<? extends Gene> |
DNASequence.getGenesOnRegion(Integer start,
Integer stop,
Coordinate.Strand strand)
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Ensembl Model v1.09 |
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