Ensembl Data Access Interface v1.09
© Roslin Institute 2010. GNU General Public License, version3
uk.ac.roslin.ensembl.dao.coreaccess
Interface GeneDAO
- All Superinterfaces:
- ReInitializationDAO
public interface GeneDAO
- extends ReInitializationDAO
getGeneByID
uk.ac.roslin.ensembl.model.core.Gene getGeneByID(Integer id)
throws uk.ac.roslin.ensembl.exception.DAOException
- Throws:
uk.ac.roslin.ensembl.exception.DAOException
addGeneByIDOnParent
uk.ac.roslin.ensembl.model.core.Gene addGeneByIDOnParent(Integer id,
uk.ac.roslin.ensembl.model.core.DNASequence parent)
throws uk.ac.roslin.ensembl.exception.DAOException
- Throws:
uk.ac.roslin.ensembl.exception.DAOException
getGeneByStableID
uk.ac.roslin.ensembl.model.core.Gene getGeneByStableID(String stableId)
throws uk.ac.roslin.ensembl.exception.DAOException
- Throws:
uk.ac.roslin.ensembl.exception.DAOException
addGeneByStableIDOnParent
uk.ac.roslin.ensembl.model.core.Gene addGeneByStableIDOnParent(String stableID,
uk.ac.roslin.ensembl.model.core.DNASequence parent)
throws uk.ac.roslin.ensembl.exception.DAOException
- Throws:
uk.ac.roslin.ensembl.exception.DAOException
getGeneMappingsOnRegion
List<? extends uk.ac.roslin.ensembl.model.Mapping> getGeneMappingsOnRegion(uk.ac.roslin.ensembl.model.core.DNASequence region,
uk.ac.roslin.ensembl.model.Coordinate coords)
throws uk.ac.roslin.ensembl.exception.DAOException
- Throws:
uk.ac.roslin.ensembl.exception.DAOException
Ensembl Data Access Interface v1.09
© Roslin Institute 2010. GNU General Public License, version3