Ensembl Model v1.09
© Roslin Institute 2010. GNU General Public License, version3
Ensembl Model
v1.09

uk.ac.roslin.ensembl.model.core
Interface AssembledDNASequence

All Superinterfaces:
org.biojava3.core.sequence.template.Accessioned, CoreObject, DNASequence, IdentifiableObject, Iterable<org.biojava3.core.sequence.compound.NucleotideCompound>, MappableObject, org.biojava3.core.sequence.template.Sequence<org.biojava3.core.sequence.compound.NucleotideCompound>, Serializable
All Known Subinterfaces:
Chromosome

public interface AssembledDNASequence
extends DNASequence

Author:
paterson

Method Summary
 Assembly getCompleteAssembly()
           
 
Methods inherited from interface uk.ac.roslin.ensembl.model.core.DNASequence
getCoordSystem, getDBSeqLength, getGenesOnRegion, getGenesOnRegion, getGenesOnRegion, getMappedRegions, getName, getObjectTypeMappings, getReverseComplementSequenceAsString, getReverseComplementSequenceAsString, getSequenceAsString, setCoordSystem, setDBSeqLength, setName
 
Methods inherited from interface uk.ac.roslin.ensembl.model.core.CoreObject
getAssembly, getSpecies, setSpecies
 
Methods inherited from interface uk.ac.roslin.ensembl.model.MappableObject
addMapping, clearAllMappings, getMappings, getMappings
 
Methods inherited from interface uk.ac.roslin.ensembl.model.IdentifiableObject
getDBVersion, getHashID, getId, getSchemaVersion, getType, setId
 
Methods inherited from interface org.biojava3.core.sequence.template.Sequence
countCompounds, getAsList, getCompoundAt, getCompoundSet, getIndexOf, getInverse, getLastIndexOf, getLength, getSequenceAsString, getSubSequence
 
Methods inherited from interface java.lang.Iterable
iterator
 
Methods inherited from interface org.biojava3.core.sequence.template.Accessioned
getAccession
 

Method Detail

getCompleteAssembly

Assembly getCompleteAssembly()

Ensembl Model
v1.09

Ensembl Model v1.09
© Roslin Institute 2010. GNU General Public License, version3