pid
Class PTMTerm
java.lang.Object
pid.PTMTerm
- All Implemented Interfaces:
- java.io.Serializable
public class PTMTerm
- extends java.lang.Object
- implements java.io.Serializable
A PTM for the current molecule.
- Author:
- Samuel Croset
- See Also:
- Serialized Form
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
protein
private java.lang.String protein
position
private int position
aminoAcid
private java.lang.String aminoAcid
modification
private java.lang.String modification
PTMTerm
public PTMTerm()
getProtein
public java.lang.String getProtein()
- Returns:
- a reference to the original protein (Uniprot).
setProtein
public void setProtein(java.lang.String protein)
getPosition
public int getPosition()
- Returns:
- position on the protein sequence where the PTM is located.
setPosition
public void setPosition(int position)
getAminoAcid
public java.lang.String getAminoAcid()
- Returns:
- the amino-acid that has been modified.
setAminoAcid
public void setAminoAcid(java.lang.String aminoAcid)
getModification
public java.lang.String getModification()
- Returns:
- the type of modification the amino-acid had.
setModification
public void setModification(java.lang.String modification)