The administration interface allows you to upload your experimental to
the PubArray database.
Step 1: Upload Design Data
The design file describes which factors you observed during your
experiment (eg: sex, strain, diet) and what values those factors took
on for a particular microarray data set. See the help for detailed
information on how this file (as well as the other files) should be
structured.
Step 2: Upload Microarray Data
Your microarray data file should contain all of the intensity
data from your microarray experiment (this could be normalized or
raw data). The first column should contain all of the probe ID's
(or probeset ID's) used in the microarray that you performed your
experiment on.
Step 3: Upload Annotation Data (Optional)
The first column of the annotation data file should contain all of
the same probe ID's that are found in the data file that was loaded
in Step 2. The remaining annotation columns can contain
arbitrary textual or numerical data, such as GO terms or gene IDs.
Eg: Affymetrix Annotations, MGI Annotations ...
Step 4: Upload Statistics Data (Optional)
The formatting rules are exactly the same as for the Annotation Data.
The first column of the statistics data file should contain all of
the same probe ID's that are found in the data file that was loaded
in Step 2. The remaining statistics columns can contain
arbitrary textual or numerical data such as such as precalculated
probe statistics.
Eg: Model 1 Statistics, B6 Statistics, Stats ...
Step 5: Save Changes
No file uploads or metadata edits will be available until they are
saved to the database