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about
- Variable in class org.opentox.ontology.meta.
DCMeta
AbsOntClass
- Class in
org.opentox.ontology.namespaces
Superclass for all Namespaces introduced in opentox such as
AlgorithmTypes
,
OTProperties
and
OTClass
AbsOntClass()
- Constructor for class org.opentox.ontology.namespaces.
AbsOntClass
AbsOntClass(Resource)
- Constructor for class org.opentox.ontology.namespaces.
AbsOntClass
AbsOntClass.Class
- Class in
org.opentox.ontology.namespaces
Class Resources of the AbsOntClass.
AbsOntClass.Class()
- Constructor for class org.opentox.ontology.namespaces.
AbsOntClass.Class
AbsOntClass.Class(Resource)
- Constructor for class org.opentox.ontology.namespaces.
AbsOntClass.Class
AbstractAlgorithmFormatter
- Class in
org.opentox.formatters
AbstractAlgorithmFormatter()
- Constructor for class org.opentox.formatters.
AbstractAlgorithmFormatter
Constructor of the Abstract Formater.
AbstractModelFormatter
- Class in
org.opentox.formatters
AbstractModelFormatter(int)
- Constructor for class org.opentox.formatters.
AbstractModelFormatter
AbstractTrainer
- Class in
org.opentox.algorithm.trainer
Abstract Algorithm Trainer.
AbstractTrainer(Form, ServerResource)
- Constructor for class org.opentox.algorithm.trainer.
AbstractTrainer
Constructor.
AbstractTrainer.Classification
- Annotation Type in
org.opentox.algorithm.trainer
AbstractTrainer.Regression
- Annotation Type in
org.opentox.algorithm.trainer
addUser(String, String, Priviledges)
- Method in class org.opentox.database.
UsersTable
This method is used to add a new user to the USERS table.
ADMIN
- Static variable in class org.opentox.auth.
Priviledges
Administrators.
Algorithm
- Static variable in class org.opentox.ontology.namespaces.
OTClass
algorithm
- Static variable in class org.opentox.ontology.namespaces.
OTProperties
Algorithm
- Class in
org.opentox.resource
Algorithm()
- Constructor for class org.opentox.resource.
Algorithm
algorithm
- Variable in class org.opentox.resource.
Algorithm
The id of the regression algorithm.
algorithm
- Variable in class org.opentox.resource.
ModelResource
ALGORITHM_TYPE_QUERY
- Static variable in class org.opentox.resource.
ListModels
searchAlgorithm can be any keyword related to algorithms such as classification, regression, learning, svm, svc, mlr, knn.
AlgorithmEnum
- Enum in
org.opentox.algorithm
Enumeration of all available algorithms on the server.
AlgorithmEnum(String)
- Constructor for enum org.opentox.algorithm.
AlgorithmEnum
Private Constructor.
AlgorithmEnum.IteratorImpl
- Class in
org.opentox.algorithm
AlgorithmEnum.IteratorImpl()
- Constructor for class org.opentox.algorithm.
AlgorithmEnum.IteratorImpl
AlgorithmJsonFormatter
- Class in
org.opentox.formatters
AlgorithmJsonFormatter(AlgorithmMeta)
- Constructor for class org.opentox.formatters.
AlgorithmJsonFormatter
AlgorithmMeta
- Class in
org.opentox.ontology.meta
Meta-Information about an algorithm.
AlgorithmMeta()
- Constructor for class org.opentox.ontology.meta.
AlgorithmMeta
AlgorithmMeta(String)
- Constructor for class org.opentox.ontology.meta.
AlgorithmMeta
AlgorithmParameter
<
E
> - Class in
org.opentox.algorithm
Algorithm Parameter.
AlgorithmParameter(String, XSDDatatype, E, String)
- Constructor for class org.opentox.algorithm.
AlgorithmParameter
algorithmParameters
- Variable in class org.opentox.ontology.meta.
ModelMeta
List of parameters of the algorithm used to train the model.
AlgorithmRdfFormatter
- Class in
org.opentox.formatters
Build an RDF representation for an Algorithm.
AlgorithmRdfFormatter(AlgorithmMeta)
- Constructor for class org.opentox.formatters.
AlgorithmRdfFormatter
Class Constructor.
AlgorithmReporter
- Class in
org.opentox.algorithm.reporting
AlgorithmReporter()
- Constructor for class org.opentox.algorithm.reporting.
AlgorithmReporter
algorithmType
- Variable in class org.opentox.ontology.meta.
AlgorithmMeta
AlgorithmTypes
- Class in
org.opentox.ontology.namespaces
AlgorithmTypes()
- Constructor for class org.opentox.ontology.namespaces.
AlgorithmTypes
AlgorithmURI
- Variable in class org.opentox.ontology.meta.
ModelMeta
URI of the algorithm used to train the model.
algorithmURI
- Static variable in class org.opentox.resource.
OTResource.URIs
URI for all algorithms.
AlgorithmXmlFormatter
- Class in
org.opentox.formatters
AlgorithmXmlFormatter(AlgorithmMeta)
- Constructor for class org.opentox.formatters.
AlgorithmXmlFormatter
AlgorithmYamlFormatter
- Class in
org.opentox.formatters
AlgorithmYamlFormatter(AlgorithmMeta)
- Constructor for class org.opentox.formatters.
AlgorithmYamlFormatter
append(ErrorRepresentation)
- Method in class org.opentox.error.
ErrorRepresentation
Concatenates two Error Representations by mixing together their explanatory messages and their lists of Throwables.
append(Throwable, String, Status)
- Method in class org.opentox.error.
ErrorRepresentation
Adds a
Throwable
and an explanatory message for it to the current ErrorRepresentation.
application
- Variable in class org.opentox.auth.
CredentialsVerifier
APPLICATION_YAML
- Static variable in class org.opentox.media.
OpenToxMediaType
atof(String)
- Static method in class org.opentox.util.libSVM.
svm_predict
atof(String)
- Static method in class org.opentox.util.libSVM.
svm_train
atoi(String)
- Static method in class org.opentox.util.libSVM.
svm_predict
atoi(String)
- Static method in class org.opentox.util.libSVM.
svm_train
audience
- Variable in class org.opentox.ontology.meta.
DCMeta
authenticate(Request, Response)
- Method in class org.opentox.auth.
GuardDog.ChallengeAuthenticatorImpl
authorizationLevel
- Variable in class org.opentox.auth.
CredentialsVerifier
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