A B C D E F G H I J K L M N O P R S T U V W X Y _

A

about - Variable in class org.opentox.ontology.meta.DCMeta
 
AbsOntClass - Class in org.opentox.ontology.namespaces
Superclass for all Namespaces introduced in opentox such as AlgorithmTypes, OTProperties and OTClass
AbsOntClass() - Constructor for class org.opentox.ontology.namespaces.AbsOntClass
 
AbsOntClass(Resource) - Constructor for class org.opentox.ontology.namespaces.AbsOntClass
 
AbsOntClass.Class - Class in org.opentox.ontology.namespaces
Class Resources of the AbsOntClass.
AbsOntClass.Class() - Constructor for class org.opentox.ontology.namespaces.AbsOntClass.Class
 
AbsOntClass.Class(Resource) - Constructor for class org.opentox.ontology.namespaces.AbsOntClass.Class
 
AbstractAlgorithmFormatter - Class in org.opentox.formatters
 
AbstractAlgorithmFormatter() - Constructor for class org.opentox.formatters.AbstractAlgorithmFormatter
Constructor of the Abstract Formater.
AbstractModelFormatter - Class in org.opentox.formatters
 
AbstractModelFormatter(int) - Constructor for class org.opentox.formatters.AbstractModelFormatter
 
AbstractTrainer - Class in org.opentox.algorithm.trainer
Abstract Algorithm Trainer.
AbstractTrainer(Form, ServerResource) - Constructor for class org.opentox.algorithm.trainer.AbstractTrainer
Constructor.
AbstractTrainer.Classification - Annotation Type in org.opentox.algorithm.trainer
 
AbstractTrainer.Regression - Annotation Type in org.opentox.algorithm.trainer
 
addUser(String, String, Priviledges) - Method in class org.opentox.database.UsersTable
This method is used to add a new user to the USERS table.
ADMIN - Static variable in class org.opentox.auth.Priviledges
Administrators.
Algorithm - Static variable in class org.opentox.ontology.namespaces.OTClass
 
algorithm - Static variable in class org.opentox.ontology.namespaces.OTProperties
 
Algorithm - Class in org.opentox.resource
 
Algorithm() - Constructor for class org.opentox.resource.Algorithm
 
algorithm - Variable in class org.opentox.resource.Algorithm
The id of the regression algorithm.
algorithm - Variable in class org.opentox.resource.ModelResource
 
ALGORITHM_TYPE_QUERY - Static variable in class org.opentox.resource.ListModels
searchAlgorithm can be any keyword related to algorithms such as classification, regression, learning, svm, svc, mlr, knn.
AlgorithmEnum - Enum in org.opentox.algorithm
Enumeration of all available algorithms on the server.
AlgorithmEnum(String) - Constructor for enum org.opentox.algorithm.AlgorithmEnum
Private Constructor.
AlgorithmEnum.IteratorImpl - Class in org.opentox.algorithm
 
AlgorithmEnum.IteratorImpl() - Constructor for class org.opentox.algorithm.AlgorithmEnum.IteratorImpl
 
AlgorithmJsonFormatter - Class in org.opentox.formatters
 
AlgorithmJsonFormatter(AlgorithmMeta) - Constructor for class org.opentox.formatters.AlgorithmJsonFormatter
 
AlgorithmMeta - Class in org.opentox.ontology.meta
Meta-Information about an algorithm.
AlgorithmMeta() - Constructor for class org.opentox.ontology.meta.AlgorithmMeta
 
AlgorithmMeta(String) - Constructor for class org.opentox.ontology.meta.AlgorithmMeta
 
AlgorithmParameter<E> - Class in org.opentox.algorithm
Algorithm Parameter.
AlgorithmParameter(String, XSDDatatype, E, String) - Constructor for class org.opentox.algorithm.AlgorithmParameter
 
algorithmParameters - Variable in class org.opentox.ontology.meta.ModelMeta
List of parameters of the algorithm used to train the model.
AlgorithmRdfFormatter - Class in org.opentox.formatters
Build an RDF representation for an Algorithm.
AlgorithmRdfFormatter(AlgorithmMeta) - Constructor for class org.opentox.formatters.AlgorithmRdfFormatter
Class Constructor.
AlgorithmReporter - Class in org.opentox.algorithm.reporting
 
AlgorithmReporter() - Constructor for class org.opentox.algorithm.reporting.AlgorithmReporter
 
algorithmType - Variable in class org.opentox.ontology.meta.AlgorithmMeta
 
AlgorithmTypes - Class in org.opentox.ontology.namespaces
 
AlgorithmTypes() - Constructor for class org.opentox.ontology.namespaces.AlgorithmTypes
 
AlgorithmURI - Variable in class org.opentox.ontology.meta.ModelMeta
URI of the algorithm used to train the model.
algorithmURI - Static variable in class org.opentox.resource.OTResource.URIs
URI for all algorithms.
AlgorithmXmlFormatter - Class in org.opentox.formatters
 
AlgorithmXmlFormatter(AlgorithmMeta) - Constructor for class org.opentox.formatters.AlgorithmXmlFormatter
 
AlgorithmYamlFormatter - Class in org.opentox.formatters
 
AlgorithmYamlFormatter(AlgorithmMeta) - Constructor for class org.opentox.formatters.AlgorithmYamlFormatter
 
append(ErrorRepresentation) - Method in class org.opentox.error.ErrorRepresentation
Concatenates two Error Representations by mixing together their explanatory messages and their lists of Throwables.
append(Throwable, String, Status) - Method in class org.opentox.error.ErrorRepresentation
Adds a Throwable and an explanatory message for it to the current ErrorRepresentation.
application - Variable in class org.opentox.auth.CredentialsVerifier
 
APPLICATION_YAML - Static variable in class org.opentox.media.OpenToxMediaType
 
atof(String) - Static method in class org.opentox.util.libSVM.svm_predict
 
atof(String) - Static method in class org.opentox.util.libSVM.svm_train
 
atoi(String) - Static method in class org.opentox.util.libSVM.svm_predict
 
atoi(String) - Static method in class org.opentox.util.libSVM.svm_train
 
audience - Variable in class org.opentox.ontology.meta.DCMeta
 
authenticate(Request, Response) - Method in class org.opentox.auth.GuardDog.ChallengeAuthenticatorImpl
 
authorizationLevel - Variable in class org.opentox.auth.CredentialsVerifier
 

A B C D E F G H I J K L M N O P R S T U V W X Y _