Example usage for com.google.common.collect Range contains

Introduction

In this page you can find the example usage for com.google.common.collect Range contains.

Prototype

public boolean contains(C value) 

Source Link

Document

Returns true if value is within the bounds of this range.

Usage

From source file:org.obm.push.mail.bean.MessageSet.java

public boolean contains(long uid) {
    for (Range<Long> range : ranges) {
        if (range.contains(uid)) {
            return true;
        }/* ww w. j  a va2s . c  o m*/
    }
    return false;
}

---

From source file:net.sf.mzmine.modules.visualization.spectra.datasets.ScanDataSet.java

/**
 * This function finds highest data point intensity in given m/z range. It
 * is important for normalizing isotope patterns.
 *//*from   w w w.  j  a  va 2 s .com*/
public double getHighestIntensity(Range<Double> mzRange) {

    double maxIntensity = 0;
    for (DataPoint dp : dataPoints) {
        if ((mzRange.contains(dp.getMZ())) && (dp.getIntensity() > maxIntensity))
            maxIntensity = dp.getIntensity();
    }

    return maxIntensity;
}

---

From source file:net.sf.mzmine.modules.peaklistmethods.alignment.path.scorer.RTScore.java

public boolean matches(AlignmentPath path, PeakListRow peak, ParameterSet parameters) {
    rtTolerance = parameters.getParameter(PathAlignerParameters.RTTolerance).getValue();
    mzTolerance = parameters.getParameter(PathAlignerParameters.MZTolerance).getValue();
    Range<Double> rtRange = rtTolerance.getToleranceRange(path.getRT());
    Range<Double> mzRange = mzTolerance.getToleranceRange(path.getMZ());

    if (!rtRange.contains(peak.getAverageRT()) || !mzRange.contains(peak.getAverageMZ())) {
        return false;
    }/*  w  w w . j  a v a 2s. c o m*/
    return true;
}

---

From source file:com.google.errorprone.bugpatterns.ParameterName.java

private void checkArguments(Tree tree, List<? extends ExpressionTree> arguments, VisitorState state) {
    if (arguments.isEmpty()) {
        return;/*from  w  ww.  j ava 2  s  .co  m*/
    }
    MethodSymbol sym = (MethodSymbol) ASTHelpers.getSymbol(tree);
    if (NamedParameterComment.containsSyntheticParameterName(sym)) {
        return;
    }
    int start = ((JCTree) tree).getStartPosition();
    int end = state.getEndPosition(getLast(arguments));
    if (start == Position.NOPOS || end == Position.NOPOS) {
        // best effort work-around for https://github.com/google/error-prone/issues/780
        return;
    }
    String source = state.getSourceCode().subSequence(start, end).toString();
    if (!source.contains("/*")) {
        // fast path if the arguments don't contain anything that looks like a comment
        return;
    }
    Deque<ErrorProneToken> tokens = new ArrayDeque<>(ErrorProneTokens.getTokens(source, state.context));
    forEachPair(sym.getParameters().stream(), arguments.stream(), (p, a) -> {
        while (!tokens.isEmpty() && ((start + tokens.peekFirst().pos()) < ((JCTree) a).getStartPosition())) {
            tokens.removeFirst();
        }
        if (tokens.isEmpty()) {
            return;
        }
        Range<Integer> argRange = Range.closedOpen(((JCTree) a).getStartPosition(), state.getEndPosition(a));
        if (!argRange.contains(start + tokens.peekFirst().pos())) {
            return;
        }
        checkArgument(p, a, start, tokens.removeFirst(), state);
    });
}

---

From source file:com.google.errorprone.bugpatterns.BooleanParameter.java

private void checkParameter(VarSymbol paramSym, ExpressionTree a, int start, Deque<ErrorProneToken> tokens,
        VisitorState state) {/*  ww w . j av a 2 s  .  c  om*/
    if (!isBooleanLiteral(a)) {
        return;
    }
    if (state.getTypes().unboxedTypeOrType(paramSym.type).getTag() != TypeTag.BOOLEAN) {
        // don't suggest on non-boolean (e.g., generic) parameters)
        return;
    }
    String name = paramSym.getSimpleName().toString();
    if (name.length() < 2) {
        // single-character parameter names aren't helpful
        return;
    }
    if (EXCLUDED_NAMES.contains(name)) {
        return;
    }
    while (!tokens.isEmpty() && ((start + tokens.peekFirst().pos()) < ((JCTree) a).getStartPosition())) {
        tokens.removeFirst();
    }
    if (tokens.isEmpty()) {
        return;
    }
    Range<Integer> argRange = Range.closedOpen(((JCTree) a).getStartPosition(), state.getEndPosition(a));
    if (!argRange.contains(start + tokens.peekFirst().pos())) {
        return;
    }
    if (hasParameterComment(tokens.removeFirst())) {
        return;
    }
    state.reportMatch(
            describeMatch(a, SuggestedFix.prefixWith(a, String.format("/* %s= */", paramSym.getSimpleName()))));
}

---

From source file:io.horizondb.model.core.blocks.AbstractDataBlock.java

/**
 * {@inheritDoc}//w w w.j  ava 2  s  .c o  m
 */
@Override
public final RangeMap<Field, DataBlock> split(TimeSeriesDefinition definition) throws IOException {

    Range<Field> range = BlockHeaderUtils.getRange(getHeader());

    Range<Field> partitionRange = definition.getPartitionTimeRange(range.lowerEndpoint());

    if (partitionRange.contains(range.upperEndpoint())) {
        return ImmutableRangeMap.<Field, DataBlock>of(partitionRange, this);
    }

    TimeSeriesRecord[] records = definition.newRecords();

    ImmutableRangeMap.Builder<Field, DataBlock> builder = ImmutableRangeMap.builder();

    RecordAppender appender = new RecordAppender(definition, Buffers.getDefaultAllocator(), records);

    Field[] timestamps = new Field[records.length];
    for (int i = 0; i < timestamps.length; i++) {
        timestamps[i] = definition.newField(Record.TIMESTAMP_FIELD_NAME);
    }

    try (BinaryTimeSeriesRecordIterator iterator = new BinaryTimeSeriesRecordIterator(definition,
            singleton(this))) {

        while (iterator.hasNext()) {

            Record record = iterator.next();
            Field timestamp = timestamps[record.getType()];
            if (record.isDelta()) {
                timestamp.add(record.getField(Record.TIMESTAMP_FIELD_INDEX));
            } else {
                record.getField(Record.TIMESTAMP_FIELD_INDEX).copyTo(timestamp);
            }

            if (!partitionRange.contains(timestamp)) {

                builder.put(partitionRange, appender.getDataBlock());
                partitionRange = definition.getPartitionTimeRange(timestamp);
                appender = new RecordAppender(definition, Buffers.getDefaultAllocator(), records);
            }
            appender.append(record);
        }
        builder.put(partitionRange, appender.getDataBlock());
    }

    return builder.build();
}

---

From source file:net.sf.mzmine.modules.peaklistmethods.identification.complexsearch.ComplexSearchTask.java

/**
 * Check if candidate peak may be a possible complex of given two peaks
 * /*from   w ww .j a v a2 s . c  om*/
 */
private boolean checkComplex(PeakListRow complexRow, PeakListRow row1, PeakListRow row2) {

    // Check retention time condition
    Range<Double> rtRange = rtTolerance.getToleranceRange(complexRow.getAverageRT());
    if (!rtRange.contains(row1.getAverageRT()))
        return false;
    if (!rtRange.contains(row2.getAverageRT()))
        return false;

    // Check mass condition
    double expectedMass = row1.getAverageMZ() + row2.getAverageMZ() - (2 * ionType.getAddedMass());
    double detectedMass = complexRow.getAverageMZ() - ionType.getAddedMass();
    Range<Double> mzRange = mzTolerance.getToleranceRange(detectedMass);
    if (!mzRange.contains(expectedMass))
        return false;

    // Check height condition
    if ((complexRow.getAverageHeight() > row1.getAverageHeight() * maxComplexHeight)
            || (complexRow.getAverageHeight() > row2.getAverageHeight() * maxComplexHeight))
        return false;

    return true;

}

---

From source file:com.bigdata.dastor.dht.BootStrapper.java

/** get potential sources for each range, ordered by proximity (as determined by EndPointSnitch) */
Multimap<Range, InetAddress> getRangesWithSources(String table) {
    assert tokenMetadata.sortedTokens().size() > 0;
    final AbstractReplicationStrategy strat = StorageService.instance.getReplicationStrategy(table);
    Collection<Range> myRanges = strat.getPendingAddressRanges(tokenMetadata, token, address, table);

    Multimap<Range, InetAddress> myRangeAddresses = ArrayListMultimap.create();
    Multimap<Range, InetAddress> rangeAddresses = strat.getRangeAddresses(tokenMetadata, table);
    for (Range myRange : myRanges) {
        for (Range range : rangeAddresses.keySet()) {
            if (range.contains(myRange)) {
                List<InetAddress> preferred = DatabaseDescriptor.getEndPointSnitch(table)
                        .getSortedListByProximity(address, rangeAddresses.get(range));
                myRangeAddresses.putAll(myRange, preferred);
                break;
            }//  w  w w.j a  va  2s.c  o m
        }
        assert myRangeAddresses.keySet().contains(myRange);
    }
    return myRangeAddresses;
}

---

From source file:org.eclipse.fx.ui.controls.styledtext.internal.LineHelper.java

public int getCaret(int index) {
    int globalCaret = getCaretOffset();
    Range<Integer> range = getRange(index);
    if (range.contains(Integer.valueOf(globalCaret))) {
        return mapToLocal(index, globalCaret);
    } else {/*from  w ww  .  j  a v a  2 s  . c  om*/
        return -1;
    }
}

---

From source file:net.sf.mzmine.modules.peaklistmethods.identification.glycerophospholipidsearch.GPLipidSearchTask.java

/**
 * Check if candidate peak may be a possible adduct of a given main peak
 * //from w w  w  . ja  va  2s .c o m
 * @param mainPeak
 * @param possibleFragment
 */
private void findPossibleGPL(GPLipidIdentity lipid, PeakListRow rows[]) {

    final double lipidIonMass = lipid.getMass() + ionizationType.getAddedMass();

    logger.finest("Searching for lipid " + lipid.getDescription() + ", " + lipidIonMass + " m/z");

    for (int rowIndex = 0; rowIndex < rows.length; rowIndex++) {

        if (isCanceled())
            return;

        Range<Double> mzTolRange = mzTolerance.getToleranceRange(rows[rowIndex].getAverageMZ());

        if (mzTolRange.contains(lipidIonMass)) {
            rows[rowIndex].addPeakIdentity(lipid, false);

            // Notify the GUI about the change in the project
            MZmineCore.getProjectManager().getCurrentProject().notifyObjectChanged(rows[rowIndex], false);
        }

    }

}

---

• «
• 1
• 2
• 3
• 4
• 5
• 6
• 7
• 8
• 9
• 10
• 11
• »