List of usage examples for javafx.scene.input KeyCode O
KeyCode O
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From source file:com.heliosdecompiler.helios.gui.controller.MenuBarController.java
@FXML private void initialize() { stage.addEventFilter(KeyEvent.KEY_RELEASED, event -> { if (event.isShortcutDown() && event.getCode() == KeyCode.O) { onOpen();/* ww w . j av a2 s.c o m*/ } }); stage.addEventFilter(KeyEvent.KEY_RELEASED, event -> { if (event.isShortcutDown() && event.getCode() == KeyCode.N) { onReset(); } }); stage.addEventFilter(KeyEvent.KEY_RELEASED, event -> { if (event.getCode() == KeyCode.F5) { getParentController().getFileTreeController().reload(); } }); try { GuiceFXMLLoader.Result result = loader.load(getClass().getResource("/views/pathEditor.fxml")); pathEditorController = result.getController(); } catch (IOException ex) { messageHandler.handleException(Message.ERROR_UNKNOWN_ERROR.format(), ex); } try { GuiceFXMLLoader.Result result = loader.load(getClass().getResource("/views/transformerSettings.fxml")); transformerSettingsController = result.getController(); } catch (IOException ex) { messageHandler.handleException(Message.ERROR_UNKNOWN_ERROR.format(), ex); } // for mac (and maybe linux once java supports it) // todo refactor into UIController root.setUseSystemMenuBar(true); }
From source file:jviewmda.JViewMda.java
@Override public void start(Stage primaryStage) { m_stage = primaryStage;/*from w ww. j a v a2s .com*/ String array_path = ""; Parameters params = getParameters(); List<String> unnamed_params = params.getUnnamed(); if (unnamed_params.size() > 0) { array_path = unnamed_params.get(0); } // FOR DEBUGING PURPOSES if (array_path.length() == 0) { //String debug_path = "/home/magland/wisdm/www/wisdmfileserver/files/fetalmri/sessions/SESSION1/crops/FNP001A-coronal.crop.mda"; String debug_path = "/home/magland/data/LesionProbe/Images/ID001_FLAIR.nii"; if ((new File(debug_path)).exists()) { array_path = debug_path; } } Menu menu; MenuItem item; MenuBar menubar = new MenuBar(); //file menu menu = new Menu("File"); menubar.getMenus().add(menu); item = new MenuItem("Open..."); item.setAccelerator(new KeyCodeCombination(KeyCode.O, KeyCombination.CONTROL_DOWN)); item.setOnAction(e -> on_file_open()); menu.getItems().add(item); item = new MenuItem("Save As..."); item.setAccelerator(new KeyCodeCombination(KeyCode.S, KeyCombination.CONTROL_DOWN)); item.setOnAction(e -> on_file_saveas()); menu.getItems().add(item); menu.getItems().add(new SeparatorMenuItem()); ///////////////////////////////////////////// item = new MenuItem("Exit"); item.setAccelerator(new KeyCodeCombination(KeyCode.X, KeyCombination.CONTROL_DOWN)); item.setOnAction(e -> on_file_exit()); menu.getItems().add(item); //view menu menu = new Menu("View"); menubar.getMenus().add(menu); item = new MenuItem("Zoom In"); item.setAccelerator(new KeyCodeCombination(KeyCode.Z, KeyCombination.CONTROL_DOWN)); item.setOnAction(e -> on_zoom_in()); menu.getItems().add(item); item = new MenuItem("Zoom Out"); item.setAccelerator( new KeyCodeCombination(KeyCode.Z, KeyCombination.CONTROL_DOWN, KeyCombination.SHIFT_DOWN)); item.setOnAction(e -> on_zoom_out()); menu.getItems().add(item); menu.getItems().add(new SeparatorMenuItem()); ///////////////////////////////////////////// { CheckMenuItem item0 = new CheckMenuItem("Top Controls"); item0.setSelected(true); item0.setOnAction(e -> { m_widget.setTopControlsVisible(item0.isSelected()); }); menu.getItems().add(item0); } { CheckMenuItem item0 = new CheckMenuItem("Bottom Controls"); item0.setSelected(true); item0.setOnAction(e -> { m_widget.setBottomControlsVisible(item0.isSelected()); }); menu.getItems().add(item0); } { CheckMenuItem item0 = new CheckMenuItem("Brightness/Contrast"); item0.setSelected(true); item0.setOnAction(e -> { m_widget.setBrightnessContrastVisible(item0.isSelected()); }); menu.getItems().add(item0); } { CheckMenuItem item0 = new CheckMenuItem("Slice Slider"); item0.setSelected(true); item0.setOnAction(e -> { m_widget.setSliceSliderVisible(item0.isSelected()); }); menu.getItems().add(item0); } //selection menu menu = new Menu("Selection"); menubar.getMenus().add(menu); Map<String, CheckMenuItem> mode_items = new HashMap<>(); m_selection_mode_items = mode_items; mode_items.put("rectangle", new CheckMenuItem("Rectangle")); mode_items.put("ellipse", new CheckMenuItem("Ellipse")); Set<String> keys = mode_items.keySet(); for (String key : keys) { CheckMenuItem item0 = mode_items.get(key); menu.getItems().add(item0); item0.setOnAction(evt -> { on_selection_mode_changed(key); }); } mode_items.get("rectangle").setSelected(true); VBox root = new VBox(); root.getChildren().addAll(menubar, m_widget); Scene scene = new Scene(root, 500, 450); primaryStage.setTitle("JViewMda"); primaryStage.setScene(scene); primaryStage.show(); if (array_path.length() > 0) { open_file(array_path); } m_prefs = Preferences.userNodeForPackage(this.getClass()); }
From source file:com.esri.geoevent.test.performance.ui.OrchestratorController.java
/** * Handle action related to input (in this case specifically only responds * to keyboard event CTRL-A)./*www. j av a2s .c om*/ * * @param event Input event. */ @FXML public void handleKeyInput(final InputEvent event) { if (event instanceof KeyEvent) { final KeyEvent keyEvent = (KeyEvent) event; if (keyEvent.isControlDown() && keyEvent.getCode() == KeyCode.A) { provideAboutFunctionality(); } else if (keyEvent.isControlDown() && keyEvent.getCode() == KeyCode.R) { showReportOptionsDialog(); } else if (keyEvent.isControlDown() && keyEvent.getCode() == KeyCode.O) { openFixturesFile(); } else if (keyEvent.isControlDown() && keyEvent.getCode() == KeyCode.S) { saveFixturesFile(); } else if (keyEvent.isControlDown() && keyEvent.getCode() == KeyCode.L) { showLoggerDialog(); } } }
From source file:editeurpanovisu.EditeurPanovisu.java
/** * * @param vbRacine panel d'installation du menu * @throws Exception Exceptions//ww w .j a va2s .c o m */ private static void creeMenu(VBox vbRacine) throws Exception { VBox vbMonPanneau = new VBox(); vbMonPanneau.setPrefHeight(80); vbMonPanneau.setPrefWidth(3000); mbarPrincipal.setMinHeight(29); mbarPrincipal.setPrefHeight(29); mbarPrincipal.setMaxHeight(29); mbarPrincipal.setPrefWidth(3000); if (isMac()) { mbarPrincipal.setUseSystemMenuBar(true); } /* Menu projets */ Menu mnuProjet = new Menu(rbLocalisation.getString("projets")); mbarPrincipal.getMenus().add(mnuProjet); mniNouveauProjet = new MenuItem(rbLocalisation.getString("nouveauProjet")); mniNouveauProjet.setAccelerator(new KeyCodeCombination(KeyCode.N, KeyCombination.SHORTCUT_DOWN)); mnuProjet.getItems().add(mniNouveauProjet); mniChargeProjet = new MenuItem(rbLocalisation.getString("ouvrirProjet")); mniChargeProjet.setAccelerator(new KeyCodeCombination(KeyCode.O, KeyCombination.SHORTCUT_DOWN)); mnuProjet.getItems().add(mniChargeProjet); mniSauveProjet = new MenuItem(rbLocalisation.getString("sauverProjet")); mniSauveProjet.setDisable(true); mniSauveProjet.setAccelerator(new KeyCodeCombination(KeyCode.S, KeyCombination.SHORTCUT_DOWN)); mnuProjet.getItems().add(mniSauveProjet); mniSauveSousProjet = new MenuItem(rbLocalisation.getString("sauverProjetSous")); mniSauveSousProjet.setDisable(true); mniSauveSousProjet.setAccelerator( new KeyCodeCombination(KeyCode.S, KeyCombination.SHORTCUT_DOWN, KeyCodeCombination.SHIFT_DOWN)); mnuProjet.getItems().add(mniSauveSousProjet); mnuDerniersProjets = new Menu(rbLocalisation.getString("derniersProjets")); mnuProjet.getItems().add(mnuDerniersProjets); fileHistoFichiers = new File(fileRepertConfig.getAbsolutePath() + File.separator + "derniersprojets.cfg"); nombreHistoFichiers = 0; if (fileHistoFichiers.exists()) { try (BufferedReader brHistoFichiers = new BufferedReader( new InputStreamReader(new FileInputStream(fileHistoFichiers), "UTF-8"))) { while ((strTexteHisto = brHistoFichiers.readLine()) != null) { MenuItem menuDerniersFichiers = new MenuItem(strTexteHisto); mnuDerniersProjets.getItems().add(menuDerniersFichiers); strHistoFichiers[nombreHistoFichiers] = strTexteHisto; nombreHistoFichiers++; menuDerniersFichiers.setOnAction((e) -> { MenuItem mniSousMenu = (MenuItem) e.getSource(); try { try { projetChargeNom(mniSousMenu.getText()); } catch (InterruptedException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); } } } SeparatorMenuItem sepMenu1 = new SeparatorMenuItem(); mnuProjet.getItems().add(sepMenu1); mniFermerProjet = new MenuItem(rbLocalisation.getString("quitterApplication")); mniFermerProjet.setAccelerator(new KeyCodeCombination(KeyCode.A, KeyCombination.SHORTCUT_DOWN)); mnuProjet.getItems().add(mniFermerProjet); /* Menu affichage */ Menu mnuAffichage = new Menu(rbLocalisation.getString("affichage")); mbarPrincipal.getMenus().add(mnuAffichage); mniAffichageVisite = new MenuItem(rbLocalisation.getString("main.creationVisite")); mniAffichageVisite.setAccelerator(new KeyCodeCombination(KeyCode.DIGIT1, KeyCombination.SHORTCUT_DOWN)); mnuAffichage.getItems().add(mniAffichageVisite); mniAffichageInterface = new MenuItem(rbLocalisation.getString("main.creationInterface")); mniAffichageInterface.setAccelerator(new KeyCodeCombination(KeyCode.DIGIT2, KeyCombination.SHORTCUT_DOWN)); mnuAffichage.getItems().add(mniAffichageInterface); setMniAffichagePlan(new MenuItem(rbLocalisation.getString("main.tabPlan"))); getMniAffichagePlan().setAccelerator(new KeyCodeCombination(KeyCode.DIGIT3, KeyCombination.SHORTCUT_DOWN)); getMniAffichagePlan().setDisable(true); mnuAffichage.getItems().add(getMniAffichagePlan()); mniOutilsLoupe = new MenuItem(rbLocalisation.getString("main.loupe")); mniOutilsLoupe.setAccelerator(new KeyCodeCombination(KeyCode.L, KeyCombination.SHORTCUT_DOWN)); mnuAffichage.getItems().add(mniOutilsLoupe); SeparatorMenuItem sep3 = new SeparatorMenuItem(); mnuAffichage.getItems().add(sep3); mniConfigTransformation = new MenuItem(rbLocalisation.getString("affichageConfiguration")); mnuAffichage.getItems().add(mniConfigTransformation); /* Menu panoramiques */ mnuPanoramique = new Menu(rbLocalisation.getString("panoramiques")); mnuPanoramique.setDisable(true); mbarPrincipal.getMenus().add(mnuPanoramique); mniAjouterPano = new MenuItem(rbLocalisation.getString("ajouterPanoramiques")); mniAjouterPano.setAccelerator(new KeyCodeCombination(KeyCode.A, KeyCombination.SHORTCUT_DOWN)); mnuPanoramique.getItems().add(mniAjouterPano); setMniAjouterPlan(new MenuItem(rbLocalisation.getString("ajouterPlan"))); getMniAjouterPlan().setAccelerator(new KeyCodeCombination(KeyCode.P, KeyCombination.SHORTCUT_DOWN)); mnuPanoramique.getItems().add(getMniAjouterPlan()); getMniAjouterPlan().setDisable(true); SeparatorMenuItem sep2 = new SeparatorMenuItem(); mnuPanoramique.getItems().add(sep2); mniVisiteGenere = new MenuItem(rbLocalisation.getString("genererVisite")); mniVisiteGenere.setDisable(true); mniVisiteGenere.setAccelerator(new KeyCodeCombination(KeyCode.V, KeyCombination.SHORTCUT_DOWN)); mnuPanoramique.getItems().add(mniVisiteGenere); /* Menu Modles */ mnuModeles = new Menu(rbLocalisation.getString("menuModele")); mbarPrincipal.getMenus().add(mnuModeles); mniChargerModele = new MenuItem(rbLocalisation.getString("modeleCharger")); mnuModeles.getItems().add(mniChargerModele); mniSauverModele = new MenuItem(rbLocalisation.getString("modeleSauver")); mnuModeles.getItems().add(mniSauverModele); /* Menu transformations */ mnuTransformation = new Menu(rbLocalisation.getString("outils")); mbarPrincipal.getMenus().add(mnuTransformation); mniEqui2CubeTransformation = new MenuItem(rbLocalisation.getString("outilsEqui2Cube")); mnuTransformation.getItems().add(mniEqui2CubeTransformation); mniCube2EquiTransformation = new MenuItem(rbLocalisation.getString("outilsCube2Equi")); mnuTransformation.getItems().add(mniCube2EquiTransformation); SeparatorMenuItem sep6 = new SeparatorMenuItem(); mnuTransformation.getItems().add(sep6); mniOutilsBarre = new MenuItem(rbLocalisation.getString("outilsBarre")); mniOutilsBarre.setAccelerator(new KeyCodeCombination(KeyCode.B, KeyCombination.SHORTCUT_DOWN)); mnuTransformation.getItems().add(mniOutilsBarre); mniOutilsDiaporama = new MenuItem(rbLocalisation.getString("outilsDiaporama")); mniOutilsDiaporama.setAccelerator(new KeyCodeCombination(KeyCode.D, KeyCombination.SHORTCUT_DOWN)); mnuTransformation.getItems().add(mniOutilsDiaporama); /* Menu Aide */ Menu mnuAide = new Menu(rbLocalisation.getString("aide")); mbarPrincipal.getMenus().add(mnuAide); mniAide = new MenuItem(rbLocalisation.getString("aideAide")); mniAide.setAccelerator(new KeyCodeCombination(KeyCode.H, KeyCombination.SHORTCUT_DOWN)); mnuAide.getItems().add(mniAide); SeparatorMenuItem sep4 = new SeparatorMenuItem(); mnuAide.getItems().add(sep4); mniAPropos = new MenuItem(rbLocalisation.getString("aideAPropos")); mnuAide.getItems().add(mniAPropos); // // } // /* barre de boutons */ hbBarreBouton = new HBox(); hbBarreBouton.getStyleClass().add("menuBarreOutils1"); hbBarreBouton.setPrefHeight(50); hbBarreBouton.setMinHeight(50); hbBarreBouton.setPrefWidth(3000); /* Bouton nouveau Projet */ ScrollPane spBtnNouvprojet = new ScrollPane(); spBtnNouvprojet.getStyleClass().add("menuBarreOutils"); spBtnNouvprojet.setHbarPolicy(ScrollPane.ScrollBarPolicy.NEVER); spBtnNouvprojet.setPrefHeight(35); spBtnNouvprojet.setMaxHeight(35); spBtnNouvprojet.setPadding(new Insets(2)); spBtnNouvprojet.setPrefWidth(35); HBox.setMargin(spBtnNouvprojet, new Insets(5, 15, 0, 15)); ivNouveauProjet = new ImageView( new Image("file:" + getStrRepertAppli() + File.separator + "images/nouveauProjet.png")); spBtnNouvprojet.setContent(ivNouveauProjet); Tooltip tltpNouveauProjet = new Tooltip(rbLocalisation.getString("nouveauProjet")); tltpNouveauProjet.setStyle(getStrTooltipStyle()); spBtnNouvprojet.setTooltip(tltpNouveauProjet); hbBarreBouton.getChildren().add(spBtnNouvprojet); /* Bouton ouvrir Projet */ ScrollPane spBtnOuvrirProjet = new ScrollPane(); spBtnOuvrirProjet.getStyleClass().add("menuBarreOutils"); spBtnOuvrirProjet.setHbarPolicy(ScrollPane.ScrollBarPolicy.NEVER); spBtnOuvrirProjet.setPrefHeight(35); spBtnOuvrirProjet.setMaxHeight(35); spBtnOuvrirProjet.setPadding(new Insets(2)); spBtnOuvrirProjet.setPrefWidth(35); HBox.setMargin(spBtnOuvrirProjet, new Insets(5, 15, 0, 0)); ivChargeProjet = new ImageView( new Image("file:" + getStrRepertAppli() + File.separator + "images/ouvrirProjet.png")); spBtnOuvrirProjet.setContent(ivChargeProjet); Tooltip tltpOuvrirProjet = new Tooltip(rbLocalisation.getString("ouvrirProjet")); tltpOuvrirProjet.setStyle(getStrTooltipStyle()); spBtnOuvrirProjet.setTooltip(tltpOuvrirProjet); hbBarreBouton.getChildren().add(spBtnOuvrirProjet); /* Bouton sauve Projet */ ScrollPane spBtnSauveProjet = new ScrollPane(); spBtnSauveProjet.getStyleClass().add("menuBarreOutils"); spBtnSauveProjet.setHbarPolicy(ScrollPane.ScrollBarPolicy.NEVER); spBtnSauveProjet.setPrefHeight(35); spBtnSauveProjet.setMaxHeight(35); spBtnSauveProjet.setPadding(new Insets(2)); spBtnSauveProjet.setPrefWidth(35); HBox.setMargin(spBtnSauveProjet, new Insets(5, 15, 0, 0)); ivSauveProjet = new ImageView( new Image("file:" + getStrRepertAppli() + File.separator + "images/sauveProjet.png")); spBtnSauveProjet.setContent(ivSauveProjet); Tooltip tltpSauverProjet = new Tooltip(rbLocalisation.getString("sauverProjet")); tltpSauverProjet.setStyle(getStrTooltipStyle()); spBtnSauveProjet.setTooltip(tltpSauverProjet); hbBarreBouton.getChildren().add(spBtnSauveProjet); Separator sepImages = new Separator(Orientation.VERTICAL); sepImages.prefHeight(200); hbBarreBouton.getChildren().add(sepImages); ivSauveProjet.setDisable(true); ivSauveProjet.setOpacity(0.3); /* Bouton Ajoute Panoramique */ ScrollPane spBtnAjoutePano = new ScrollPane(); spBtnAjoutePano.getStyleClass().add("menuBarreOutils"); spBtnAjoutePano.setHbarPolicy(ScrollPane.ScrollBarPolicy.NEVER); spBtnAjoutePano.setPrefHeight(35); spBtnAjoutePano.setMaxHeight(35); spBtnAjoutePano.setPadding(new Insets(2)); spBtnAjoutePano.setPrefWidth(35); HBox.setMargin(spBtnAjoutePano, new Insets(5, 15, 0, 15)); ivAjouterPano = new ImageView( new Image("file:" + getStrRepertAppli() + File.separator + "images/ajoutePanoramique.png")); spBtnAjoutePano.setContent(ivAjouterPano); Tooltip tltpAjouterPano = new Tooltip(rbLocalisation.getString("ajouterPanoramiques")); tltpAjouterPano.setStyle(getStrTooltipStyle()); spBtnAjoutePano.setTooltip(tltpAjouterPano); hbBarreBouton.getChildren().add(spBtnAjoutePano); ivAjouterPano.setDisable(true); ivAjouterPano.setOpacity(0.3); /* Bouton Ajoute Panoramique */ ScrollPane spBtnAjoutePlan = new ScrollPane(); spBtnAjoutePlan.getStyleClass().add("menuBarreOutils"); spBtnAjoutePlan.setHbarPolicy(ScrollPane.ScrollBarPolicy.NEVER); spBtnAjoutePlan.setPrefHeight(35); spBtnAjoutePlan.setMaxHeight(35); spBtnAjoutePlan.setPadding(new Insets(2)); spBtnAjoutePlan.setPrefWidth(35); HBox.setMargin(spBtnAjoutePlan, new Insets(5, 15, 0, 15)); setIvAjouterPlan( new ImageView(new Image("file:" + getStrRepertAppli() + File.separator + "images/ajoutePlan.png"))); spBtnAjoutePlan.setContent(getIvAjouterPlan()); Tooltip tltpAjouterPlan = new Tooltip(rbLocalisation.getString("ajouterPlan")); tltpAjouterPlan.setStyle(getStrTooltipStyle()); spBtnAjoutePlan.setTooltip(tltpAjouterPlan); hbBarreBouton.getChildren().add(spBtnAjoutePlan); getIvAjouterPlan().setDisable(true); getIvAjouterPlan().setOpacity(0.3); /* Bouton Gnre */ ScrollPane spBtnGenereVisite = new ScrollPane(); spBtnGenereVisite.getStyleClass().add("menuBarreOutils"); spBtnGenereVisite.setHbarPolicy(ScrollPane.ScrollBarPolicy.NEVER); spBtnGenereVisite.setPrefHeight(35); spBtnGenereVisite.setMaxHeight(35); spBtnGenereVisite.setPadding(new Insets(2)); spBtnGenereVisite.setPrefWidth(70); HBox.setMargin(spBtnGenereVisite, new Insets(5, 15, 0, 0)); ivVisiteGenere = new ImageView( new Image("file:" + getStrRepertAppli() + File.separator + "images/genereVisite.png")); spBtnGenereVisite.setContent(ivVisiteGenere); Tooltip tltpGenererVisite = new Tooltip(rbLocalisation.getString("genererVisite")); tltpGenererVisite.setStyle(getStrTooltipStyle()); spBtnGenereVisite.setTooltip(tltpGenererVisite); hbBarreBouton.getChildren().add(spBtnGenereVisite); ivVisiteGenere.setDisable(true); ivVisiteGenere.setOpacity(0.3); Separator sepImages1 = new Separator(Orientation.VERTICAL); sepImages1.prefHeight(200); hbBarreBouton.getChildren().add(sepImages1); /* Bouton equi -> faces de Cube */ ScrollPane spBtnEqui2Cube = new ScrollPane(); spBtnEqui2Cube.getStyleClass().add("menuBarreOutils"); spBtnEqui2Cube.setHbarPolicy(ScrollPane.ScrollBarPolicy.NEVER); spBtnEqui2Cube.setPrefHeight(35); spBtnEqui2Cube.setMaxHeight(35); spBtnEqui2Cube.setPadding(new Insets(2)); spBtnEqui2Cube.setPrefWidth(109); HBox.setMargin(spBtnEqui2Cube, new Insets(5, 15, 0, 250)); ivEqui2Cube = new ImageView( new Image("file:" + getStrRepertAppli() + File.separator + "images/equi2cube.png")); spBtnEqui2Cube.setContent(ivEqui2Cube); Tooltip tltpEqui2Cube = new Tooltip(rbLocalisation.getString("outilsEqui2Cube")); tltpEqui2Cube.setStyle(getStrTooltipStyle()); spBtnEqui2Cube.setTooltip(tltpEqui2Cube); hbBarreBouton.getChildren().add(spBtnEqui2Cube); /* Bouton faces de cube -> equi */ ScrollPane spBtnCube2Equi = new ScrollPane(); spBtnCube2Equi.getStyleClass().add("menuBarreOutils"); spBtnCube2Equi.setHbarPolicy(ScrollPane.ScrollBarPolicy.NEVER); spBtnCube2Equi.setPrefHeight(35); spBtnCube2Equi.setMaxHeight(35); spBtnCube2Equi.setPadding(new Insets(2)); spBtnCube2Equi.setPrefWidth(109); HBox.setMargin(spBtnCube2Equi, new Insets(5, 25, 0, 0)); ivCube2Equi = new ImageView( new Image("file:" + getStrRepertAppli() + File.separator + "images/cube2equi.png")); spBtnCube2Equi.setContent(ivCube2Equi); Tooltip tltpCube2Equi = new Tooltip(rbLocalisation.getString("outilsCube2Equi")); tltpCube2Equi.setStyle(getStrTooltipStyle()); spBtnCube2Equi.setTooltip(tltpCube2Equi); hbBarreBouton.getChildren().add(spBtnCube2Equi); if (isMac()) { mbarPrincipal.setMaxHeight(0); hbBarreBouton.setTranslateY(-30); } vbMonPanneau.getChildren().addAll(mbarPrincipal, hbBarreBouton); vbRacine.getChildren().add(vbMonPanneau); mniNouveauProjet.setOnAction((e) -> { projetsNouveau(); }); mniChargeProjet.setOnAction((e) -> { try { try { projetCharge(); } catch (InterruptedException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); mniSauveProjet.setOnAction((e) -> { try { projetSauve(); } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); mniSauveSousProjet.setOnAction((e) -> { try { projetSauveSous(); } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); mniVisiteGenere.setOnAction((e) -> { try { genereVisite(); } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); mniFermerProjet.setOnAction((e) -> { try { projetsFermer(); } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); mniAjouterPano.setOnAction((e) -> { try { panoramiquesAjouter(); } catch (InterruptedException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); getMniAjouterPlan().setOnAction((e) -> { planAjouter(); }); mniAPropos.setOnAction((e) -> { aideapropos(); }); mniAide.setOnAction((e) -> { AideDialogController.affiche(); }); mniChargerModele.setOnAction((e) -> { try { modeleCharger(); } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); mniSauverModele.setOnAction((e) -> { try { modeleSauver(); } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); mniCube2EquiTransformation.setOnAction((e) -> { transformationCube2Equi(); }); mniEqui2CubeTransformation.setOnAction((e) -> { transformationEqui2Cube(); }); mniOutilsBarre.setOnAction((e) -> { creerEditerBarre(""); }); mniOutilsDiaporama.setOnAction((e) -> { creerEditerDiaporama(""); }); mniOutilsLoupe.setOnAction((e) -> { e.consume(); setAfficheLoupe(!isAfficheLoupe()); apLoupe.setVisible(isAfficheLoupe()); Point p = MouseInfo.getPointerInfo().getLocation(); if (p.x < getiTailleLoupe() + 80 && p.y < getiTailleLoupe() + 160) { apLoupe.setLayoutX(ivImagePanoramique.getFitWidth() - getiTailleLoupe() + 5); apLoupe.setLayoutY(35); strPositLoupe = "droite"; } else { apLoupe.setLayoutX(35); apLoupe.setLayoutY(35); strPositLoupe = "gauche"; } }); mniAffichageVisite.setOnAction((e) -> { tpEnvironnement.getSelectionModel().select(0); }); mniAffichageInterface.setOnAction((e) -> { tpEnvironnement.getSelectionModel().select(1); }); getMniAffichagePlan().setOnAction((e) -> { if (!tabPlan.isDisabled()) { tpEnvironnement.getSelectionModel().select(2); } }); mniConfigTransformation.setOnAction((e) -> { try { ConfigDialogController cfg = new ConfigDialogController(); cfg.afficheFenetre(); } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); spBtnNouvprojet.setOnMouseClicked((t) -> { projetsNouveau(); }); spBtnOuvrirProjet.setOnMouseClicked((t) -> { try { try { projetCharge(); } catch (InterruptedException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); spBtnSauveProjet.setOnMouseClicked((t) -> { try { projetSauve(); } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); spBtnAjoutePano.setOnMouseClicked((t) -> { try { panoramiquesAjouter(); } catch (InterruptedException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); spBtnAjoutePlan.setOnMouseClicked((t) -> { planAjouter(); }); spBtnGenereVisite.setOnMouseClicked((t) -> { try { genereVisite(); } catch (IOException ex) { Logger.getLogger(EditeurPanovisu.class.getName()).log(Level.SEVERE, null, ex); } }); spBtnEqui2Cube.setOnMouseClicked((t) -> { transformationEqui2Cube(); }); spBtnCube2Equi.setOnMouseClicked((t) -> { transformationCube2Equi(); }); }
From source file:qupath.lib.gui.tma.TMASummaryViewer.java
private void initialize() { model = new TMATableModel(); groupByIDProperty.addListener((v, o, n) -> refreshTableData()); MenuBar menuBar = new MenuBar(); Menu menuFile = new Menu("File"); MenuItem miOpen = new MenuItem("Open..."); miOpen.setAccelerator(new KeyCodeCombination(KeyCode.O, KeyCombination.SHORTCUT_DOWN)); miOpen.setOnAction(e -> {//from w w w.jav a 2 s . co m File file = QuPathGUI.getDialogHelper(stage).promptForFile(null, null, "TMA data files", new String[] { "qptma" }); if (file == null) return; setInputFile(file); }); MenuItem miSave = new MenuItem("Save As..."); miSave.setAccelerator( new KeyCodeCombination(KeyCode.S, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); miSave.setOnAction( e -> SummaryMeasurementTableCommand.saveTableModel(model, null, Collections.emptyList())); MenuItem miImportFromImage = new MenuItem("Import from current image..."); miImportFromImage.setAccelerator( new KeyCodeCombination(KeyCode.I, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); miImportFromImage.setOnAction(e -> setTMAEntriesFromOpenImage()); MenuItem miImportFromProject = new MenuItem("Import from current project... (experimental)"); miImportFromProject.setAccelerator( new KeyCodeCombination(KeyCode.P, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); miImportFromProject.setOnAction(e -> setTMAEntriesFromOpenProject()); MenuItem miImportClipboard = new MenuItem("Import from clipboard..."); miImportClipboard.setOnAction(e -> { String text = Clipboard.getSystemClipboard().getString(); if (text == null) { DisplayHelpers.showErrorMessage("Import scores", "Clipboard is empty!"); return; } int n = importScores(text); if (n > 0) { setTMAEntries(new ArrayList<>(entriesBase)); } DisplayHelpers.showMessageDialog("Import scores", "Number of scores imported: " + n); }); Menu menuEdit = new Menu("Edit"); MenuItem miCopy = new MenuItem("Copy table to clipboard"); miCopy.setOnAction(e -> { SummaryMeasurementTableCommand.copyTableContentsToClipboard(model, Collections.emptyList()); }); combinedPredicate.addListener((v, o, n) -> { // We want any other changes triggered by this to have happened, // so that the data has already been updated Platform.runLater(() -> handleTableContentChange()); }); // Reset the scores for missing cores - this ensures they will be NaN and not influence subsequent results MenuItem miResetMissingScores = new MenuItem("Reset scores for missing cores"); miResetMissingScores.setOnAction(e -> { int changes = 0; for (TMAEntry entry : entriesBase) { if (!entry.isMissing()) continue; boolean changed = false; for (String m : entry.getMeasurementNames().toArray(new String[0])) { if (!TMASummaryEntry.isSurvivalColumn(m) && !Double.isNaN(entry.getMeasurementAsDouble(m))) { entry.putMeasurement(m, null); changed = true; } } if (changed) changes++; } if (changes == 0) { logger.info("No changes made when resetting scores for missing cores!"); return; } logger.info("{} change(s) made when resetting scores for missing cores!", changes); table.refresh(); updateSurvivalCurves(); if (scatterPane != null) scatterPane.updateChart(); if (histogramDisplay != null) histogramDisplay.refreshHistogram(); }); menuEdit.getItems().add(miResetMissingScores); QuPathGUI.addMenuItems(menuFile, miOpen, miSave, null, miImportClipboard, null, miImportFromImage, miImportFromProject); menuBar.getMenus().add(menuFile); menuEdit.getItems().add(miCopy); menuBar.getMenus().add(menuEdit); menuFile.setOnShowing(e -> { boolean imageDataAvailable = QuPathGUI.getInstance() != null && QuPathGUI.getInstance().getImageData() != null && QuPathGUI.getInstance().getImageData().getHierarchy().getTMAGrid() != null; miImportFromImage.setDisable(!imageDataAvailable); boolean projectAvailable = QuPathGUI.getInstance() != null && QuPathGUI.getInstance().getProject() != null && !QuPathGUI.getInstance().getProject().getImageList().isEmpty(); miImportFromProject.setDisable(!projectAvailable); }); // Double-clicking previously used for comments... but conflicts with tree table expansion // table.setOnMouseClicked(e -> { // if (!e.isPopupTrigger() && e.getClickCount() > 1) // promptForComment(); // }); table.setPlaceholder(new Text("Drag TMA data folder onto window, or choose File -> Open")); table.getSelectionModel().setSelectionMode(SelectionMode.MULTIPLE); BorderPane pane = new BorderPane(); pane.setTop(menuBar); menuBar.setUseSystemMenuBar(true); // Create options ToolBar toolbar = new ToolBar(); Label labelMeasurementMethod = new Label("Combination method"); labelMeasurementMethod.setLabelFor(comboMeasurementMethod); labelMeasurementMethod .setTooltip(new Tooltip("Method whereby measurements for multiple cores with the same " + TMACoreObject.KEY_UNIQUE_ID + " will be combined")); CheckBox cbHidePane = new CheckBox("Hide pane"); cbHidePane.setSelected(hidePaneProperty.get()); cbHidePane.selectedProperty().bindBidirectional(hidePaneProperty); CheckBox cbGroupByID = new CheckBox("Group by ID"); entriesBase.addListener((Change<? extends TMAEntry> event) -> { if (!event.getList().stream().anyMatch(e -> e.getMetadataValue(TMACoreObject.KEY_UNIQUE_ID) != null)) { cbGroupByID.setSelected(false); cbGroupByID.setDisable(true); } else { cbGroupByID.setDisable(false); } }); cbGroupByID.setSelected(groupByIDProperty.get()); cbGroupByID.selectedProperty().bindBidirectional(groupByIDProperty); CheckBox cbUseSelected = new CheckBox("Use selection only"); cbUseSelected.selectedProperty().bindBidirectional(useSelectedProperty); CheckBox cbSkipMissing = new CheckBox("Hide missing cores"); cbSkipMissing.selectedProperty().bindBidirectional(skipMissingCoresProperty); skipMissingCoresProperty.addListener((v, o, n) -> { table.refresh(); updateSurvivalCurves(); if (histogramDisplay != null) histogramDisplay.refreshHistogram(); updateSurvivalCurves(); if (scatterPane != null) scatterPane.updateChart(); }); toolbar.getItems().addAll(labelMeasurementMethod, comboMeasurementMethod, new Separator(Orientation.VERTICAL), cbHidePane, new Separator(Orientation.VERTICAL), cbGroupByID, new Separator(Orientation.VERTICAL), cbUseSelected, new Separator(Orientation.VERTICAL), cbSkipMissing); comboMeasurementMethod.getItems().addAll(MeasurementCombinationMethod.values()); comboMeasurementMethod.getSelectionModel().select(MeasurementCombinationMethod.MEDIAN); selectedMeasurementCombinationProperty.addListener((v, o, n) -> table.refresh()); ContextMenu popup = new ContextMenu(); MenuItem miSetMissing = new MenuItem("Set missing"); miSetMissing.setOnAction(e -> setSelectedMissingStatus(true)); MenuItem miSetAvailable = new MenuItem("Set available"); miSetAvailable.setOnAction(e -> setSelectedMissingStatus(false)); MenuItem miExpand = new MenuItem("Expand all"); miExpand.setOnAction(e -> { if (table.getRoot() == null) return; for (TreeItem<?> item : table.getRoot().getChildren()) { item.setExpanded(true); } }); MenuItem miCollapse = new MenuItem("Collapse all"); miCollapse.setOnAction(e -> { if (table.getRoot() == null) return; for (TreeItem<?> item : table.getRoot().getChildren()) { item.setExpanded(false); } }); popup.getItems().addAll(miSetMissing, miSetAvailable, new SeparatorMenuItem(), miExpand, miCollapse); table.setContextMenu(popup); table.setRowFactory(e -> { TreeTableRow<TMAEntry> row = new TreeTableRow<>(); // // Make rows invisible if they don't pass the predicate // row.visibleProperty().bind(Bindings.createBooleanBinding(() -> { // TMAEntry entry = row.getItem(); // if (entry == null || (entry.isMissing() && skipMissingCoresProperty.get())) // return false; // return entries.getPredicate() == null || entries.getPredicate().test(entry); // }, // skipMissingCoresProperty, // entries.predicateProperty())); // Style rows according to what they contain row.styleProperty().bind(Bindings.createStringBinding(() -> { if (row.isSelected()) return ""; TMAEntry entry = row.getItem(); if (entry == null || entry instanceof TMASummaryEntry) return ""; else if (entry.isMissing()) return "-fx-background-color:rgb(225,225,232)"; else return "-fx-background-color:rgb(240,240,245)"; }, row.itemProperty(), row.selectedProperty())); // row.itemProperty().addListener((v, o, n) -> { // if (n == null || n instanceof TMASummaryEntry || row.isSelected()) // row.setStyle(""); // else if (n.isMissing()) // row.setStyle("-fx-background-color:rgb(225,225,232)"); // else // row.setStyle("-fx-background-color:rgb(240,240,245)"); // }); return row; }); BorderPane paneTable = new BorderPane(); paneTable.setTop(toolbar); paneTable.setCenter(table); MasterDetailPane mdTablePane = new MasterDetailPane(Side.RIGHT, paneTable, createSidePane(), true); mdTablePane.showDetailNodeProperty().bind(Bindings.createBooleanBinding( () -> !hidePaneProperty.get() && !entriesBase.isEmpty(), hidePaneProperty, entriesBase)); mdTablePane.setDividerPosition(2.0 / 3.0); pane.setCenter(mdTablePane); model.getEntries().addListener(new ListChangeListener<TMAEntry>() { @Override public void onChanged(ListChangeListener.Change<? extends TMAEntry> c) { if (histogramDisplay != null) histogramDisplay.refreshHistogram(); updateSurvivalCurves(); if (scatterPane != null) scatterPane.updateChart(); } }); Label labelPredicate = new Label(); labelPredicate.setPadding(new Insets(5, 5, 5, 5)); labelPredicate.setAlignment(Pos.CENTER); // labelPredicate.setStyle("-fx-background-color: rgba(20, 120, 20, 0.15);"); labelPredicate.setStyle("-fx-background-color: rgba(120, 20, 20, 0.15);"); labelPredicate.textProperty().addListener((v, o, n) -> { if (n.trim().length() > 0) pane.setBottom(labelPredicate); else pane.setBottom(null); }); labelPredicate.setMaxWidth(Double.MAX_VALUE); labelPredicate.setMaxHeight(labelPredicate.getPrefHeight()); labelPredicate.setTextAlignment(TextAlignment.CENTER); predicateMeasurements.addListener((v, o, n) -> { if (n == null) labelPredicate.setText(""); else if (n instanceof TablePredicate) { TablePredicate tp = (TablePredicate) n; if (tp.getOriginalCommand().trim().isEmpty()) labelPredicate.setText(""); else labelPredicate.setText("Predicate: " + tp.getOriginalCommand()); } else labelPredicate.setText("Predicate: " + n.toString()); }); // predicate.set(new TablePredicate("\"Tumor\" > 100")); scene = new Scene(pane); scene.addEventHandler(KeyEvent.KEY_PRESSED, e -> { KeyCode code = e.getCode(); if ((code == KeyCode.SPACE || code == KeyCode.ENTER) && entrySelected != null) { promptForComment(); return; } }); }
From source file:snpviewer.SnpViewer.java
@Override public void initialize(URL url, ResourceBundle rb) { labelSplitPane.setDividerPositions(); chromSplitPane.setDividerPositions(); Pane lpane = (Pane) horizontalSplit.getItems().get(0); SplitPane.setResizableWithParent(lpane, false); //mnemonics/shortcuts for menus mainMenu.useSystemMenuBarProperty().set(true); fileMenu.setMnemonicParsing(true);/*from w ww. j ava 2s . c o m*/ sampleMenu.setMnemonicParsing(true); goMenu.setMnemonicParsing(true); helpMenu.setMnemonicParsing(true); newProjectMenu.setAccelerator(new KeyCodeCombination(KeyCode.N, KeyCombination.SHORTCUT_DOWN)); loadProjectMenu.setAccelerator(new KeyCodeCombination(KeyCode.L, KeyCombination.SHORTCUT_DOWN)); addAffSampleMenu.setAccelerator( new KeyCodeCombination(KeyCode.A, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); addUnSampleMenu.setAccelerator( new KeyCodeCombination(KeyCode.U, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); nextChromMenu.setAccelerator(new KeyCodeCombination(KeyCode.EQUALS, KeyCombination.SHORTCUT_DOWN)); prevChromMenu.setAccelerator(new KeyCodeCombination(KeyCode.MINUS, KeyCombination.SHORTCUT_DOWN)); firstChromMenu.setAccelerator(new KeyCodeCombination(KeyCode.DIGIT1, KeyCombination.SHORTCUT_DOWN)); lastChromMenu.setAccelerator(new KeyCodeCombination(KeyCode.DIGIT0, KeyCombination.SHORTCUT_DOWN)); redrawMenu.setAccelerator(new KeyCodeCombination(KeyCode.R, KeyCombination.SHORTCUT_DOWN)); cacheChromsMenu.setAccelerator( new KeyCodeCombination(KeyCode.C, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); saveToPngMenu.setAccelerator( new KeyCodeCombination(KeyCode.S, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); autoFindRegions.setAccelerator(new KeyCodeCombination(KeyCode.F, KeyCombination.SHORTCUT_DOWN)); //need to disable hideSavedRegionsMenu accelerator for linux - doesn't work for check menus hideSavedRegionsMenu.setAccelerator( new KeyCodeCombination(KeyCode.H, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); clearSavedRegionsMenu.setAccelerator( new KeyCodeCombination(KeyCode.X, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); displaySavedsRegionsMenu.setAccelerator(new KeyCodeCombination(KeyCode.T, KeyCombination.SHORTCUT_DOWN)); outputSavedRegionsMenu.setAccelerator(new KeyCodeCombination(KeyCode.O, KeyCombination.SHORTCUT_DOWN)); removeSampleMenu.setAccelerator( new KeyCodeCombination(KeyCode.R, KeyCombination.SHORTCUT_DOWN, KeyCombination.SHIFT_DOWN)); //set radio menu item toggle group ArrayList<RadioMenuItem> callQualityRadios = new ArrayList<>( Arrays.asList(noFilteringRadio, filter99, filter95, filter90, filter85)); ToggleGroup callQualityToggle = new ToggleGroup(); for (RadioMenuItem r : callQualityRadios) { r.setToggleGroup(callQualityToggle); } noFilteringRadio.setOnAction(new EventHandler() { @Override public void handle(Event ev) { setQualityFilter(null); } }); filter99.setOnAction(new EventHandler() { @Override public void handle(Event ev) { setQualityFilter(0.01); } }); filter95.setOnAction(new EventHandler() { @Override public void handle(Event ev) { setQualityFilter(0.05); } }); filter90.setOnAction(new EventHandler() { @Override public void handle(Event ev) { setQualityFilter(0.10); } }); filter85.setOnAction(new EventHandler() { @Override public void handle(Event ev) { setQualityFilter(0.15); } }); nextChromMenu.setOnAction(new EventHandler() { @Override public void handle(Event ev) { selectNextChromosome(true); } }); prevChromMenu.setOnAction(new EventHandler() { @Override public void handle(Event ev) { selectNextChromosome(false); } }); firstChromMenu.setOnAction(new EventHandler() { @Override public void handle(Event ev) { if (!cancelButton.isDisabled()) { cancelButton.fire(); } if (!chromosomeSelector.isDisabled()) { chromosomeSelector.getSelectionModel().selectFirst(); } } }); lastChromMenu.setOnAction(new EventHandler() { @Override public void handle(Event ev) { if (!cancelButton.isDisabled()) { cancelButton.fire(); } if (!chromosomeSelector.isDisabled()) { chromosomeSelector.getSelectionModel().selectLast(); } } }); hideSavedRegionsMenu.setOnAction(new EventHandler() { @Override public void handle(Event ev) { showHideSavedRegions(); } }); colorComp.addAll(Arrays.asList(colorComponants)); //selection context menu final ContextMenu scm = new ContextMenu(); final MenuItem scmItem1 = new MenuItem("Display Flanking SNP IDs"); scmItem1.setOnAction(new EventHandler<ActionEvent>() { @Override public void handle(ActionEvent e) { /* get coordinates of selection and report back * flanking snp ids and coordinates */ displayFlankingSnpIDs(dragSelectRectangle); } }); final MenuItem scmItem2 = new MenuItem("Write Selected Region to File"); scmItem2.setOnAction(new EventHandler<ActionEvent>() { @Override public void handle(ActionEvent e) { Platform.runLater(new Runnable() { @Override public void run() { /* get coordinates of selection and report back * write SNPs in region to file */ writeRegionToFile(dragSelectRectangle); } }); } }); final MenuItem scmItem3 = new MenuItem("Add To Saved Regions"); scmItem3.setOnAction(new EventHandler<ActionEvent>() { @Override public void handle(ActionEvent e) { /* get coordinates of selection and report back * write SNPs in region to file */ saveSelection(); } }); final MenuItem scmItem4 = new MenuItem("Show/Hide Saved Regions"); scmItem4.setOnAction(new EventHandler<ActionEvent>() { @Override public void handle(ActionEvent e) { /* get coordinates of selection and report back * write SNPs in region to file */ hideSavedRegionsMenu.selectedProperty().setValue(!hideSavedRegionsMenu.isSelected()); hideSavedRegionsMenu.fire(); } }); final MenuItem scmItem5 = new MenuItem("Zoom Region"); scmItem5.setOnAction(new EventHandler<ActionEvent>() { @Override public void handle(ActionEvent e) { Platform.runLater(new Runnable() { @Override public void run() { /* get coordinates of selection and report back * write SNPs in region to file */ zoomRegion(dragSelectRectangle); } }); } }); final MenuItem scmItem6 = new MenuItem("Write Saved Regions to File"); scmItem6.setOnAction(new EventHandler<ActionEvent>() { @Override public void handle(ActionEvent e) { Platform.runLater(new Runnable() { @Override public void run() { /* get coordinates of selection and report back * write SNPs in region to file */ writeSavedRegionsToFile(); } }); } }); scm.getItems().add(scmItem1); scm.getItems().add(scmItem2); scm.getItems().add(scmItem3); scm.getItems().add(scmItem4); scm.getItems().add(scmItem5); scm.getItems().add(scmItem6); //overlayPane context menu ocm = new ContextMenu(); final MenuItem ocmItem1 = new MenuItem("Save Image to File"); ocmItem1.setOnAction(new EventHandler<ActionEvent>() { @Override public void handle(ActionEvent e) { Platform.runLater(new Runnable() { @Override public void run() { drawPaneToPng(); } }); } }); ocm.getItems().add(ocmItem1); ocm.getItems().add(scmItem4); ocm.getItems().add(scmItem6); //color selections colorComponantSelector.getItems().clear(); colorComponantSelector.getItems().add("AA"); colorComponantSelector.getItems().add("BB"); colorComponantSelector.getItems().add("AB"); colorComponantSelector.getItems().add("Selection Outline"); colorComponantSelector.getItems().add("Selection Fill"); colorComponantSelector.getItems().add("Saved Region Outline"); colorComponantSelector.getItems().add("Saved Region Fill"); colorComponantSelector.getSelectionModel().selectFirst(); colorPicker.setValue(colorComponants[0]); colorComponantSelector.getSelectionModel().selectedIndexProperty() .addListener(new ChangeListener<Number>() { @Override public void changed(ObservableValue ov, Number value, Number new_value) { colorPicker.setValue(colorComp.get(new_value.intValue())); colorPicker.fireEvent(new ActionEvent()); } }); colorPicker.setOnAction(new EventHandler() { @Override public void handle(Event t) { if (!colorComp.get(colorComponantSelector.getSelectionModel().getSelectedIndex()) .equals(colorPicker.getValue())) { colorComp.set(colorComponantSelector.getSelectionModel().getSelectedIndex(), colorPicker.getValue()); saveProject(); //colorComponants[colorComponantSelector.getSelectionModel().getSelectedIndex()] = colorPicker.getValue(); if (colorComponantSelector.getSelectionModel().getSelectedIndex() == Colors.fill.value) { dragSelectRectangle.setFill(colorPicker.getValue()); } else if (colorComponantSelector.getSelectionModel().getSelectedIndex() == Colors.line.value) { dragSelectRectangle.setStroke(colorPicker.getValue()); } else if (colorComponantSelector.getSelectionModel() .getSelectedIndex() == Colors.saveLine.value) { for (Rectangle r : savedRegionsDisplay) { r.setStroke(colorPicker.getValue()); } } else if (colorComponantSelector.getSelectionModel() .getSelectedIndex() == Colors.saveFill.value) { for (Rectangle r : savedRegionsDisplay) { r.setFill(colorPicker.getValue()); } } else { removeSavedChromosomeImages(); if (redrawCheckBox.isSelected()) { refreshView(null, true); } } } } }); /*perform appropriate action when user selects a chromosome * from the chromosome choice box */ chromosomeSelector.getSelectionModel().selectedIndexProperty().addListener(new ChangeListener<Number>() { @Override public void changed(ObservableValue ov, Number value, Number new_value) { chromosomeBoxList = chromosomeSelector.getItems().toArray(); if (new_value.intValue() > -1) { chromosomeSelected((String) chromosomeBoxList[new_value.intValue()]); } } }); chromosomeSelector.addEventFilter(KeyEvent.ANY, new EventHandler<KeyEvent>() { @Override public void handle(KeyEvent ke) { if (ke.getCode() == KeyCode.UP) { ke.consume(); chromosomeSelector.show(); } } }); selectionOverlayPane.heightProperty().addListener(new ChangeListener<Number>() { @Override public void changed(ObservableValue<? extends Number> observableValue, Number oldSceneWidth, Number newSceneWidth) { windowResized(new ActionEvent()); } }); selectionOverlayPane.widthProperty().addListener(new ChangeListener<Number>() { @Override public void changed(ObservableValue<? extends Number> observableValue, Number oldSceneWidth, Number newSceneWidth) { windowResized(new ActionEvent()); } }); /*upon addition of a new affected file adjust components accordingly * i.e. ensure appropriate chromosomes are in the choice box * adjust the split panes to fit all files and redisplay */ affObserve.addListener(new ListChangeListener() { @Override public void onChanged(ListChangeListener.Change change) { change.next();/*from the javadoc * 'Go to the next change. In initial state is invalid a require * a call to next() before calling other methods. The first * next() call will make this object represent the first change. */ if (change.getRemovedSize() > 0) { List<SnpFile> both = new ArrayList<>(unFiles); both.addAll(affFiles); recheckChromosomeSelector(both);//need to check all files again, not just affFiles } else if (change.getAddedSize() > 0) { addToChromosomeSelector(affFiles); } } }); /*as above * but for unaffected files */ unObserve.addListener(new ListChangeListener() { @Override public void onChanged(ListChangeListener.Change change) { change.next(); if (change.getRemovedSize() > 0) { List<SnpFile> both = new ArrayList<>(unFiles); both.addAll(affFiles); recheckChromosomeSelector(both);//need to check all files again, not just unFiles } else if (change.getAddedSize() > 0) { addToChromosomeSelector(unFiles); } } }); selectionOverlayPane.addEventHandler(MouseEvent.MOUSE_MOVED, new EventHandler<MouseEvent>() { @Override public void handle(MouseEvent e) { if (!genomeVersion.equals("") && chromosomeSelector.getSelectionModel().getSelectedIndex() > -1) { try { ChromosomeLength chromLength = new ChromosomeLength(genomeVersion); String currentChrom = (String) chromosomeBoxList[chromosomeSelector.getSelectionModel() .getSelectedIndex()]; double coordinate = chromLength.getLength(currentChrom) / chromSplitPane.getWidth() * e.getX(); positionIndicator.setText(nf.format(coordinate)); } catch (Exception ex) { positionIndicator.setText("Build Error!"); } } } }); /*handle mouse dragging and effect on dragSelectRectangle * */ dragSelectRectangle.widthProperty().bind(dragSelectRectX.subtract(dragSelectRectInitX)); dragSelectRectangle.heightProperty().bind(selectionOverlayPane.heightProperty()); //dragSelectRectangle.strokeProperty().set(colorComponants[Colors.line.value]); dragSelectRectangle.setStrokeWidth(4.0); //dragSelectRectangle.setBlendMode(BlendMode.SCREEN); dragSelectRectangle.setOpacity(0.45); dragSelectRectangle.setVisible(false); selectionOverlayPane.getChildren().add(dragSelectRectangle); selectionOverlayPane.addEventHandler(MouseEvent.MOUSE_PRESSED, new EventHandler<MouseEvent>() { @Override public void handle(MouseEvent e) { if (scm.isShowing()) { scm.hide(); } if (!e.isPrimaryButtonDown()) { if (e.isSecondaryButtonDown()) { //check we're not overlapping selection if (e.getX() >= dragSelectRectangle.getX() && e.getX() <= (dragSelectRectangle.getX() + dragSelectRectangle.getWidth())) { return; } //check we're not overlapping saved regions for (Rectangle r : savedRegionsDisplay) { if (r.isVisible() && e.getX() >= r.getX() && e.getX() <= r.getX() + r.getWidth()) { return; } } if (chromosomeSelector.getSelectionModel().isEmpty()) { ocmItem1.setDisable(true); } else { ocmItem1.setDisable(false); } ocm.show(selectionOverlayPane, e.getScreenX(), e.getScreenY()); return; } } if (ocm.isShowing()) { ocm.hide(); } dragSelectRectangle.strokeProperty().set(colorComp.get(Colors.line.value)); dragSelectRectangle.fillProperty().set(colorComp.get(Colors.fill.value)); dragSelectRectX.set(0); dragSelectRectangle.setVisible(true); dragSelectRectangle.setX(e.getX()); dragSelectRectangle.setY(0); dragSelectRectInitX.set(e.getX()); anchorInitX.set(e.getX()); } }); selectionOverlayPane.addEventHandler(MouseEvent.MOUSE_DRAGGED, new EventHandler<MouseEvent>() { @Override public void handle(MouseEvent e) { if (!e.isPrimaryButtonDown()) { return; } dragSelectRectangle.setVisible(true); if (e.getX() > anchorInitX.doubleValue()) {//dragging to the right if (e.getX() <= selectionOverlayPane.getLayoutX() + selectionOverlayPane.getWidth()) { //mouse is before the edge of the pane dragSelectRectInitX.set(anchorInitX.doubleValue()); dragSelectRectX.set(e.getX()); } else { //mouse is over the edge dragSelectRectX.set(selectionOverlayPane.getWidth()); } } else { if (e.getX() > selectionOverlayPane.getLayoutX()) { dragSelectRectInitX.set(e.getX()); dragSelectRectangle.setX(e.getX()); dragSelectRectX.set(anchorInitX.doubleValue()); } else { dragSelectRectInitX.set(0); dragSelectRectangle.setX(0); /* the two lines below are just to trigger * dragSelectRectangle.widthProperty listener * so that start coordinate changes to 1 */ dragSelectRectX.set(anchorInitX.doubleValue() + 1); dragSelectRectX.set(anchorInitX.doubleValue() + 1); } } } }); selectionOverlayPane.addEventHandler(MouseEvent.MOUSE_RELEASED, new EventHandler<MouseEvent>() { @Override public void handle(MouseEvent e) { //dragSelectRectX.set(e.getX()); if (!e.isPrimaryButtonDown()) { return; } dragSelectRectangle.setVisible(true); if (dragSelectRectangle.getWidth() == 0) { clearDragSelectRectangle(); } } }); dragSelectRectangle.widthProperty().addListener(new ChangeListener() { @Override public void changed(ObservableValue observableValue, Object oldValue, Object newRectWidth) { if (!genomeVersion.equals("") && chromosomeSelector.getSelectionModel().getSelectedIndex() > -1 && dragSelectRectangle.getWidth() > 0) { try { ChromosomeLength chromLength = new ChromosomeLength(genomeVersion); String currentChrom = (String) chromosomeBoxList[chromosomeSelector.getSelectionModel() .getSelectedIndex()]; double startCoordinate = chromLength.getLength(currentChrom) / selectionOverlayPane.getWidth() * dragSelectRectangle.getX(); double selectionWidth = chromLength.getLength(currentChrom) / selectionOverlayPane.getWidth() * dragSelectRectangle.getWidth(); if (dragSelectRectangle.getX() == 0) { startCoordinate = 1; } selectionIndicator.setText("chr" + currentChrom + ":" + nf.format(startCoordinate) + "-" + nf.format(startCoordinate + selectionWidth)); } catch (Exception ex) { selectionIndicator.setText("Build Error!"); } } else { selectionIndicator.setText(""); } } }); dragSelectRectangle.addEventHandler(MouseEvent.MOUSE_CLICKED, new EventHandler<MouseEvent>() { @Override public void handle(MouseEvent e) { if (e.getButton() == MouseButton.SECONDARY) { if (chromosomeSelector.getSelectionModel().isEmpty()) { scmItem1.setDisable(true); scmItem2.setDisable(true); } else { scmItem1.setDisable(false); scmItem2.setDisable(false); } if (ocm.isShowing()) { ocm.hide(); } scm.show(selectionOverlayPane, e.getScreenX(), e.getScreenY()); } } }); }