Example usage for javax.imageio ImageReader getNumImages

List of usage examples for javax.imageio ImageReader getNumImages

Introduction

In this page you can find the example usage for javax.imageio ImageReader getNumImages.

Prototype

public abstract int getNumImages(boolean allowSearch) throws IOException;

Source Link

Document

Returns the number of images, not including thumbnails, available from the current input source.

Usage

From source file:Main.java

public Main(String filename) throws Exception {
    FileInputStream fin = new FileInputStream(filename);
    String suffix = filename.substring(filename.lastIndexOf('.') + 1);
    System.out.println("suf " + suffix);
    Iterator readers = ImageIO.getImageReadersBySuffix(suffix);
    ImageReader imageReader = (ImageReader) readers.next();
    ImageInputStream iis = ImageIO.createImageInputStream(fin);
    imageReader.setInput(iis, false);//from   w  w  w .  j  av  a  2s.c o  m
    int num = imageReader.getNumImages(true);
    images = new BufferedImage[num];
    for (int i = 0; i < num; ++i) {
        images[i] = imageReader.read(i);
    }
    fin.close();
}

From source file:com.gargoylesoftware.htmlunit.javascript.host.canvas.rendering.AwtRenderingBackend.java

/**
 * {@inheritDoc}/*  w  ww  . j av a  2s .c  o m*/
 */
public void drawImage(final ImageReader imageReader, final int dxI, final int dyI) throws IOException {
    if (imageReader.getNumImages(true) != 0) {
        final BufferedImage img = imageReader.read(0);
        graphics2D_.drawImage(img, dxI, dyI, null);
    }
}

From source file:Main.java

public Main() throws Exception {
    String filename = "a.png";
    FileInputStream inputStream = new FileInputStream(filename);
    String extensionName = filename.substring(filename.lastIndexOf('.') + 1);
    Iterator readers = ImageIO.getImageReadersBySuffix(extensionName);
    ImageReader imageReader = (ImageReader) readers.next();
    ImageInputStream imageInputStream = ImageIO.createImageInputStream(inputStream);
    imageReader.setInput(imageInputStream, false);
    int num = imageReader.getNumImages(true);
    images = new BufferedImage[num];
    for (int i = 0; i < num; ++i) {
        images[i] = imageReader.read(i);
    }/* w  w w  . ja v a  2  s .c  o  m*/
    inputStream.close();
}

From source file:net.filterlogic.util.imaging.ToTIFF.java

/**
 * Convert multipage TIFF to single page TIFF.
 * @param srcFiles Array of source files to convert.
 * @param destPath Folder to store single page TIFFs in.
 * @param archivePath Path to move source TIFF files to after single page TIFFs created.
 * @param pattern Pattern of single page TIFF file names.  Java NumberFormatter used with page number to create file name.
 * @param multipage Set to true if source TIFFs should be coverted to multi-page TIFF.
 * @param dpi DPI to set TIFFs to./*from   w w w .  ja  v  a 2s .co m*/
 * @return Returns a list of files in destination path.
 * @throws net.filterlogic.util.imaging.OpenCaptureImagingException
 */
public static List toTIFF(String[] srcFiles, String destPath, String archivePath, String pattern,
        boolean multipage, int dpi) throws OpenCaptureImagingException {
    String pathSep = System.getProperty("file.separator");
    boolean jaiSupport = true;

    int pageCount = 0;
    int fileNameCount = 0;

    byte[] imageData = null;

    // make sure destpath has trailing slash.
    if (destPath.lastIndexOf(pathSep) != destPath.length() - 1)
        destPath += pathSep;

    // create path if doesn't exist
    if (!Path.ValidatePath(destPath))
        if (!Path.createPath(destPath))
            throw new OpenCaptureImagingException(
                    "Unable to create destination path for imported images [" + destPath + "]");

    // make sure archivePath has trailing slash
    if (archivePath.lastIndexOf(pathSep) != archivePath.length() - 1)
        archivePath += pathSep;

    if (!Path.ValidatePath(archivePath))
        if (!Path.createPath(archivePath))
            throw new OpenCaptureImagingException(
                    "Unable to create archive path for imported images [" + archivePath + "]");

    // set a default pattern if one not passed.
    if (pattern.trim().length() < 1)
        pattern = "#";

    NumberFormat formatter = new DecimalFormat(pattern);

    ArrayList<String> list = new ArrayList<String>();

    for (int i = 0; i < srcFiles.length; i++) {
        try {

            File f = new File(srcFiles[i]);
            imageData = null;

            ImageIO.setUseCache(false);
            ImageInputStream imageInputStream = ImageIO.createImageInputStream(f);
            java.util.Iterator readers = ImageIO.getImageReaders(imageInputStream);

            ImageReader reader1 = null;

            if (readers.hasNext()) {
                reader1 = (ImageReader) readers.next();
                jaiSupport = true;
            } else
                jaiSupport = false;

            if (jaiSupport) {
                //ImageInputStream iis = ImageIO.createImageInputStream(new FileInputStream(f));
                reader1.setInput(imageInputStream);

                pageCount = reader1.getNumImages(true);
            } else {
                String newFileName = bigEndian2LittleEndian(f.getAbsolutePath());

                if (imageInputStream != null) {
                    imageInputStream.flush();
                    imageInputStream.close();

                    reader1.setInput(imageInputStream);
                    pageCount = reader1.getNumImages(true);

                }

                imageInputStream = ImageIO.createImageInputStream(new File(newFileName));

                readers = ImageIO.getImageReaders(imageInputStream);

            }
            //                Iterator writers = ImageIO.getImageWritersByFormatName("tiff");
            //                ImageWriter writer = (ImageWriter)writers.next();

            //ImageWriteParam param = writer.getDefaultWriteParam();

            //param.setCompressionMode(ImageWriteParam.MODE_EXPLICIT);

            //String[] legalTypes = param.getCompressionTypes();

            //param.setCompressionType("PackBits");

            //ByteArrayOutputStream byteOut = new ByteArrayOutputStream();
            ImageOutputStream ios = null;
            BufferedImage img = null;

            // break out each page to single file
            for (int t = 0; t < pageCount; t++) {

                // format filenumber
                String tifName = destPath + formatter.format(fileNameCount) + ".tif";

                while (new File(tifName).exists()) {
                    tifName = destPath + formatter.format(++fileNameCount) + ".tif";
                }

                FileOutputStream file = new FileOutputStream(new File(tifName));

                if (jaiSupport) {
                    img = reader1.read(t);
                    IIOImage iioimg = reader1.readAll(t, null);
                    //ios = ImageIO.createImageOutputStream(file);
                    //IIOMetadata iiom = getMetadata(writer, img, null, 200);
                } else {
                    img = loadTIFF(imageData, t);
                }
                TIFFEncodeParam tep = setEncoder(TIFFEncodeParam.COMPRESSION_PACKBITS, 200);

                ImageEncoder encoder = ImageCodec.createImageEncoder("TIFF", file, tep);

                encoder.encode(img);
                //boolean ok = ImageIO.write(img, "tiff", ios);
                //writer.setOutput(ios);
                //writer.write(iiom, iioimg, null);

                img.flush();

                //ios.flush();
                //ios.close();
                // ios = null;
                //iioimg = null;
                //iiom = null;
                img = null;
                //writer.dispose();
                //byteOut.flush();
                file.close();

                file = null;

                //System.out.println("Add file!");

                list.add(tifName);
            }

            if (jaiSupport) {
                reader1.dispose();
            }

            readers = null;

            //                writer.dispose();
            //                writers = null;

            imageInputStream.flush();
            imageInputStream.close();
            imageInputStream = null;

            f = null;

            // move file with overwrite
            if (!net.filterlogic.io.FileAccess.Move(srcFiles[i], archivePath, true))
                throw new Exception("Unable to move input file to archive path [" + srcFiles[i] + "] to ["
                        + archivePath + "]");

        } catch (Exception e) {
            throw new OpenCaptureImagingException(e.toString());
        }
    }

    return list;
}

From source file:ImageIOTest.java

/**
 * Open a file and load the images.//from  www. j  av  a  2s .c o  m
 */
public void openFile() {
    JFileChooser chooser = new JFileChooser();
    chooser.setCurrentDirectory(new File("."));
    String[] extensions = ImageIO.getReaderFileSuffixes();
    chooser.setFileFilter(new FileNameExtensionFilter("Image files", extensions));
    int r = chooser.showOpenDialog(this);
    if (r != JFileChooser.APPROVE_OPTION)
        return;
    File f = chooser.getSelectedFile();
    Box box = Box.createVerticalBox();
    try {
        String name = f.getName();
        String suffix = name.substring(name.lastIndexOf('.') + 1);
        Iterator<ImageReader> iter = ImageIO.getImageReadersBySuffix(suffix);
        ImageReader reader = iter.next();
        ImageInputStream imageIn = ImageIO.createImageInputStream(f);
        reader.setInput(imageIn);
        int count = reader.getNumImages(true);
        images = new BufferedImage[count];
        for (int i = 0; i < count; i++) {
            images[i] = reader.read(i);
            box.add(new JLabel(new ImageIcon(images[i])));
        }
    } catch (IOException e) {
        JOptionPane.showMessageDialog(this, e);
    }
    setContentPane(new JScrollPane(box));
    validate();
}

From source file:com.gargoylesoftware.htmlunit.javascript.host.canvas.CanvasRenderingContext2D.java

/**
 * Draws images onto the canvas.//from ww  w. j av a2 s .  c  o m
 *
 * @param image an element to draw into the context
 * @param sx the X coordinate of the top left corner of the sub-rectangle of the source image
 *        to draw into the destination context
 * @param sy the Y coordinate of the top left corner of the sub-rectangle of the source image
 *        to draw into the destination context
 * @param sWidth the width of the sub-rectangle of the source image to draw into the destination context
 * @param sHeight the height of the sub-rectangle of the source image to draw into the destination context
 * @param dx the X coordinate in the destination canvas at which to place the top-left corner of the source image
 * @param dy the Y coordinate in the destination canvas at which to place the top-left corner of the source image
 * @param dWidth the width to draw the image in the destination canvas. This allows scaling of the drawn image
 * @param dHeight the height to draw the image in the destination canvas. This allows scaling of the drawn image
 */
@JsxFunction
@SuppressWarnings("unused")
public void drawImage(final Object image, final int sx, final int sy, final Object sWidth, final Object sHeight,
        final Object dx, final Object dy, final Object dWidth, final Object dHeight) {
    Integer dxI;
    Integer dyI;
    Integer dWidthI = null;
    Integer dHeightI = null;
    Integer sWidthI = null;
    Integer sHeightI = null;
    if (dx != Undefined.instance) {
        dxI = ((Number) dx).intValue();
        dyI = ((Number) dy).intValue();
        dWidthI = ((Number) dWidth).intValue();
        dHeightI = ((Number) dHeight).intValue();
    } else {
        dxI = sx;
        dyI = sy;
    }
    if (sWidth != Undefined.instance) {
        sWidthI = ((Number) sWidth).intValue();
        sHeightI = ((Number) sHeight).intValue();
    }

    try {
        if (image instanceof HTMLImageElement) {
            final ImageReader imageReader = ((HtmlImage) ((HTMLImageElement) image).getDomNodeOrDie())
                    .getImageReader();
            if (imageReader.getNumImages(true) != 0) {
                final BufferedImage img = imageReader.read(0);
                graphics2D_.drawImage(img, dxI, dyI, null);
            }
        }
    } catch (final IOException ioe) {
        throw Context.throwAsScriptRuntimeEx(ioe);
    }
}

From source file:net.filterlogic.util.imaging.ToTIFF.java

/**
 * /*from www  .j av  a 2 s  . co  m*/
 * @param fileName
 */
public void test6(String fileName) {
    try {
        File f = new File(fileName);

        ImageInputStream imageInputStream = ImageIO.createImageInputStream(f);
        java.util.Iterator readers = ImageIO.getImageReaders(imageInputStream);
        ImageReader reader1 = (ImageReader) readers.next();
        ImageInputStream iis = ImageIO.createImageInputStream(new FileInputStream(f));
        reader1.setInput(iis);

        int number = reader1.getNumImages(true);
        Iterator writers = ImageIO.getImageWritersByFormatName("tiff");
        ImageWriter writer = (ImageWriter) writers.next();

        ByteArrayOutputStream byteOut = new ByteArrayOutputStream();
        ImageOutputStream ios = null;
        BufferedImage img = null;

        for (int i = 0; i < number; i++) {
            img = reader1.read(i);
            ios = ImageIO.createImageOutputStream(byteOut);
            writer.setOutput(ios);
            writer.write(img);
            ios.flush();
            img.flush();
            byteOut.flush();
        }

    } catch (Exception e) {
        System.out.println(e.toString());
    }

}

From source file:com.occamlab.te.parsers.ImageParser.java

private static Document parse(InputStream source, Element instruction, PrintWriter logger) throws Exception {
    ImageReader reader;
    try {/*from  w w  w .ja v a  2 s  .  c  om*/
        ImageInputStream iis = ImageIO.createImageInputStream(source);
        reader = ImageIO.getImageReaders(iis).next();
        reader.setInput(iis);
    } catch (Exception e) {
        logger.println("No image handlers available for the data stream. " + e.getMessage());
        throw e;
    }

    DocumentBuilderFactory dbf = DocumentBuilderFactory.newInstance();
    DocumentBuilder db = dbf.newDocumentBuilder();
    Document doc = db.newDocument();

    TransformerFactory tf = TransformerFactory.newInstance();
    Transformer t = tf.newTransformer();
    t.transform(new DOMSource(instruction), new DOMResult(doc));

    Element new_instruction = doc.getDocumentElement();

    int framesRead = 0;
    boolean containsFrames = false;
    Element framesElement = null;
    Element metadataElement = null;

    NodeList nodes = new_instruction.getChildNodes();
    for (int i = 0; i < nodes.getLength(); i++) {
        Node node = nodes.item(i);
        if (node.getNodeType() == Node.ELEMENT_NODE) {
            // System.out.println(node.getLocalName());
            if (node.getLocalName().equals("type")) {
                node.setTextContent(reader.getFormatName().toLowerCase());
            } else if (node.getLocalName().equals("frames")) {
                framesElement = (Element) node;
                containsFrames = true;
            } else if (node.getLocalName().equals("metadata")) {
                metadataElement = (Element) node;
            } else if (node.getLocalName().equals("frame")) {
                int frame;
                String frameStr = ((Element) node).getAttribute("num");
                if (frameStr.length() == 0) {
                    frame = framesRead;
                    framesRead++;
                    ((Element) node).setAttribute("num", Integer.toString(frame));
                } else {
                    frame = Integer.parseInt(frameStr);
                    framesRead = frame + 1;
                }
                processFrame(reader, frame, node.getChildNodes(), logger);
                containsFrames = true;
            }
        }
    }

    if (containsFrames) {
        if (metadataElement != null) {
            IIOMetadata metadata = reader.getStreamMetadata();
            if (metadata != null) {
                String format = metadataElement.getAttribute("format");
                if (format.length() == 0) {
                    format = metadata.getNativeMetadataFormatName();
                }
                Node tree = metadata.getAsTree(format);
                t.transform(new DOMSource(tree), new DOMResult(metadataElement));
            }
        }
        if (framesElement != null) {
            boolean allowSearch = !reader.isSeekForwardOnly();
            int frames = reader.getNumImages(allowSearch);
            if (frames == -1) {
                try {
                    while (true) {
                        reader.read(framesRead);
                        framesRead++;
                    }
                } catch (Exception e) {
                    jlogger.log(Level.SEVERE, "", e);

                    frames = framesRead + 1;
                }
            }
            framesElement.setTextContent(Integer.toString(frames));
        }
    } else {
        processFrame(reader, 0, nodes, logger);
        framesRead = 1;
    }

    // t.transform(new DOMSource(doc), new StreamResult(System.out));
    return doc;
}

From source file:org.geotools.gce.imagemosaic.GranuleDescriptor.java

private void init(final BoundingBox granuleBBOX, final URL granuleUrl, final ImageReaderSpi suggestedSPI,
        final MultiLevelROI roiProvider, final boolean heterogeneousGranules,
        final boolean handleArtifactsFiltering, final Hints hints) {
    this.granuleBBOX = ReferencedEnvelope.reference(granuleBBOX);
    this.granuleUrl = granuleUrl;
    this.roiProvider = roiProvider;
    this.handleArtifactsFiltering = handleArtifactsFiltering;
    filterMe = handleArtifactsFiltering && roiProvider != null;

    // create the base grid to world transformation
    ImageInputStream inStream = null;
    ImageReader reader = null;
    try {//from  www  . ja v a2s .co m
        //
        //get info about the raster we have to read
        //

        // get a stream
        if (cachedStreamSPI == null) {
            cachedStreamSPI = ImageIOExt.getImageInputStreamSPI(granuleUrl, true);
            if (cachedStreamSPI == null) {
                final File file = DataUtilities.urlToFile(granuleUrl);
                if (file != null) {
                    if (LOGGER.isLoggable(Level.WARNING)) {
                        LOGGER.log(Level.WARNING, Utils.getFileInfo(file));
                    }
                }
                throw new IllegalArgumentException(
                        "Unable to get an input stream for the provided granule " + granuleUrl.toString());
            }
        }
        assert cachedStreamSPI != null : "no cachedStreamSPI available!";
        inStream = cachedStreamSPI.createInputStreamInstance(granuleUrl, ImageIO.getUseCache(),
                ImageIO.getCacheDirectory());
        if (inStream == null) {
            final File file = DataUtilities.urlToFile(granuleUrl);
            if (file != null) {
                if (LOGGER.isLoggable(Level.WARNING)) {
                    LOGGER.log(Level.WARNING, Utils.getFileInfo(file));
                }
            }
            throw new IllegalArgumentException(
                    "Unable to get an input stream for the provided file " + granuleUrl.toString());
        }

        // get a reader and try to cache the suggested SPI first
        if (cachedReaderSPI == null) {
            inStream.mark();
            if (suggestedSPI != null && suggestedSPI.canDecodeInput(inStream)) {
                cachedReaderSPI = suggestedSPI;
                inStream.reset();
            } else {
                inStream.mark();
                reader = ImageIOExt.getImageioReader(inStream);
                if (reader != null)
                    cachedReaderSPI = reader.getOriginatingProvider();
                inStream.reset();
            }

        }
        if (reader == null) {
            if (cachedReaderSPI == null) {
                throw new IllegalArgumentException(
                        "Unable to get a ReaderSPI for the provided input: " + granuleUrl.toString());
            }
            reader = cachedReaderSPI.createReaderInstance();
        }

        if (reader == null)
            throw new IllegalArgumentException(
                    "Unable to get an ImageReader for the provided file " + granuleUrl.toString());
        boolean ignoreMetadata = customizeReaderInitialization(reader, hints);
        reader.setInput(inStream, false, ignoreMetadata);
        //get selected level and base level dimensions
        final Rectangle originalDimension = Utils.getDimension(0, reader);

        // build the g2W for this tile, in principle we should get it
        // somehow from the tile itself or from the index, but at the moment
        // we do not have such info, hence we assume that it is a simple
        // scale and translate
        this.geMapper = new GridToEnvelopeMapper(new GridEnvelope2D(originalDimension), granuleBBOX);
        geMapper.setPixelAnchor(PixelInCell.CELL_CENTER);//this is the default behavior but it is nice to write it down anyway
        this.baseGridToWorld = geMapper.createAffineTransform();

        // add the base level
        this.granuleLevels.put(Integer.valueOf(0),
                new GranuleOverviewLevelDescriptor(1, 1, originalDimension.width, originalDimension.height));

        ////////////////////// Setting overviewController ///////////////////////
        if (heterogeneousGranules) {
            // //
            //
            // Right now we are setting up overviewsController by assuming that
            // overviews are internal images as happens in TIFF images
            // We can improve this by leveraging on coverageReaders  
            //
            // //

            // Getting the first level descriptor
            final GranuleOverviewLevelDescriptor baseOverviewLevelDescriptor = granuleLevels.get(0);

            // Variables initialization
            final int numberOfOvervies = reader.getNumImages(true) - 1;
            final AffineTransform2D baseG2W = baseOverviewLevelDescriptor.getGridToWorldTransform();
            final int width = baseOverviewLevelDescriptor.getWidth();
            final int height = baseOverviewLevelDescriptor.getHeight();
            final double resX = AffineTransform2D.getScaleX0(baseG2W);
            final double resY = AffineTransform2D.getScaleY0(baseG2W);
            final double[] highestRes = new double[] { resX, resY };
            final double[][] overviewsResolution = new double[numberOfOvervies][2];

            // Populating overviews and initializing overviewsController
            for (int i = 0; i < numberOfOvervies; i++) {
                overviewsResolution[i][0] = (highestRes[0] * width) / reader.getWidth(i + 1);
                overviewsResolution[i][1] = (highestRes[1] * height) / reader.getHeight(i + 1);
            }
            overviewsController = new OverviewsController(highestRes, numberOfOvervies, overviewsResolution);
        }
        //////////////////////////////////////////////////////////////////////////

        if (hints != null && hints.containsKey(Utils.CHECK_AUXILIARY_METADATA)) {
            boolean checkAuxiliaryMetadata = (Boolean) hints.get(Utils.CHECK_AUXILIARY_METADATA);
            if (checkAuxiliaryMetadata) {
                checkPamDataset();
            }
        }

    } catch (IllegalStateException e) {
        throw new IllegalArgumentException(e);

    } catch (IOException e) {
        throw new IllegalArgumentException(e);
    } finally {
        // close/dispose stream and readers
        try {
            if (inStream != null) {
                inStream.close();
            }
        } catch (Throwable e) {
            throw new IllegalArgumentException(e);
        } finally {
            if (reader != null) {
                reader.dispose();
            }
        }
    }
}

From source file:org.geotools.utils.imagemosaic.MosaicIndexBuilder.java

/**
 * Main thread for the mosaic index builder.
 *//*from  ww  w.  j av a2s  .c  o  m*/
public void run() {

    // /////////////////////////////////////////////////////////////////////
    //
    // CREATING INDEX FILE
    //
    // /////////////////////////////////////////////////////////////////////

    // /////////////////////////////////////////////////////////////////////
    //
    // Create a file handler that write log record to a file called
    // my.log
    //
    // /////////////////////////////////////////////////////////////////////
    FileHandler handler = null;
    try {
        boolean append = true;
        handler = new FileHandler(new StringBuffer(locationPath).append("/error.txt").toString(), append);
        handler.setLevel(Level.SEVERE);
        // Add to the desired logger
        LOGGER.addHandler(handler);

        // /////////////////////////////////////////////////////////////////////
        //
        // Create a set of file names that have to be skipped since these are
        // our metadata files
        //
        // /////////////////////////////////////////////////////////////////////
        final Set<String> skipFiles = new HashSet<String>(
                Arrays.asList(new String[] { indexName + ".shp", indexName + ".dbf", indexName + ".shx",
                        indexName + ".prj", "error.txt", "error.txt.lck", indexName + ".properties" }));

        // /////////////////////////////////////////////////////////////////////
        //
        // Creating temp vars
        //
        // /////////////////////////////////////////////////////////////////////
        ShapefileDataStore index = null;
        Transaction t = new DefaultTransaction();
        // declaring a preciosion model to adhere the java double type
        // precision
        PrecisionModel precMod = new PrecisionModel(PrecisionModel.FLOATING);
        GeometryFactory geomFactory = new GeometryFactory(precMod);
        try {
            index = new ShapefileDataStore(
                    new File(locationPath + File.separator + indexName + ".shp").toURI().toURL());
        } catch (MalformedURLException ex) {
            if (LOGGER.isLoggable(Level.SEVERE))
                LOGGER.log(Level.SEVERE, ex.getLocalizedMessage(), ex);
            fireException(ex);
            return;
        }

        final List<File> files = new ArrayList<File>();
        recurse(files, locationPath);

        // /////////////////////////////////////////////////////////////////////
        //
        // Cycling over the files that have filtered out
        //
        // /////////////////////////////////////////////////////////////////////
        numFiles = files.size();
        String validFileName = null;
        final Iterator<File> filesIt = files.iterator();
        FeatureWriter<SimpleFeatureType, SimpleFeature> fw = null;
        boolean doneSomething = false;
        for (int i = 0; i < numFiles; i++) {

            StringBuffer message;
            // //
            //
            // Check that this file is actually good to go
            //
            // //         
            final File fileBeingProcessed = ((File) filesIt.next());
            if (!fileBeingProcessed.exists() || !fileBeingProcessed.canRead() || !fileBeingProcessed.isFile()) {
                // send a message
                message = new StringBuffer("Skipped file ").append(files.get(i))
                        .append(" snce it seems invalid.");
                if (LOGGER.isLoggable(Level.INFO))
                    LOGGER.info(message.toString());
                fireEvent(message.toString(), ((i * 99.0) / numFiles));
                continue;
            }

            // //
            //
            // Anyone has asked us to stop?
            //
            // //
            if (getStopThread()) {
                message = new StringBuffer("Stopping requested at file  ").append(i).append(" of ")
                        .append(numFiles).append(" files");
                if (LOGGER.isLoggable(Level.FINE)) {
                    LOGGER.fine(message.toString());
                }
                fireEvent(message.toString(), ((i * 100.0) / numFiles));
                return;
            } // replacing chars on input path
            try {
                validFileName = fileBeingProcessed.getCanonicalPath();
            } catch (IOException e1) {
                fireException(e1);
                return;
            }
            validFileName = validFileName.replace('\\', '/');
            validFileName = validFileName.substring(locationPath.length() + 1,
                    fileBeingProcessed.getAbsolutePath().length());
            if (skipFiles.contains(validFileName))
                continue;
            message = new StringBuffer("Now indexing file ").append(validFileName);

            if (LOGGER.isLoggable(Level.FINE)) {
                LOGGER.fine(message.toString());
            }
            fireEvent(message.toString(), ((i * 100.0) / numFiles));
            try {
                // ////////////////////////////////////////////////////////
                //
                //
                // STEP 1
                // Getting an ImageIO reader for this coverage.
                //
                //
                // ////////////////////////////////////////////////////////
                ImageInputStream inStream = ImageIO.createImageInputStream(fileBeingProcessed);
                if (inStream == null) {
                    if (LOGGER.isLoggable(Level.SEVERE))
                        LOGGER.severe(fileBeingProcessed
                                + " has been skipped since we could not get a stream for it");
                    continue;
                }
                inStream.mark();
                final Iterator<ImageReader> it = ImageIO.getImageReaders(inStream);
                ImageReader r = null;
                if (it.hasNext()) {
                    r = (ImageReader) it.next();
                    r.setInput(inStream);
                } else {
                    // release resources
                    try {
                        inStream.close();
                    } catch (Exception e) {
                        // ignore exception
                    }
                    //               try {
                    //                  r.dispose();
                    //               } catch (Exception e) {
                    //                  // ignore exception
                    //               }

                    // send a message
                    message = new StringBuffer("Skipped file ").append(files.get(i))
                            .append(":No ImageIO readeres avalaible.");
                    if (LOGGER.isLoggable(Level.INFO))
                        LOGGER.info(message.toString());
                    fireEvent(message.toString(), ((i * 99.0) / numFiles));
                    continue;
                }

                // ////////////////////////////////////////////////////////
                //
                // STEP 2
                // Getting a coverage reader for this coverage.
                //
                // ////////////////////////////////////////////////////////
                if (LOGGER.isLoggable(Level.FINE))
                    LOGGER.fine(new StringBuffer("Getting a reader").toString());
                final AbstractGridFormat format = (AbstractGridFormat) GridFormatFinder
                        .findFormat(files.get(i));
                if (format == null || !format.accepts(files.get(i))) {
                    // release resources
                    try {
                        inStream.close();
                    } catch (Exception e) {
                        // ignore exception
                    }
                    try {
                        r.dispose();
                    } catch (Exception e) {
                        // ignore exception
                    }

                    message = new StringBuffer("Skipped file ").append(files.get(i))
                            .append(": File format is not supported.");
                    if (LOGGER.isLoggable(Level.INFO))
                        LOGGER.info(message.toString());
                    fireEvent(message.toString(), ((i * 99.0) / numFiles));
                    continue;
                }
                final AbstractGridCoverage2DReader reader = (AbstractGridCoverage2DReader) format
                        .getReader(files.get(i));
                envelope = (GeneralEnvelope) reader.getOriginalEnvelope();
                actualCRS = reader.getCrs();

                // /////////////////////////////////////////////////////////////////////
                //
                // STEP 3
                // Get the type specifier for this image and the check that the
                // image has the correct sample model and color model.
                // If this is the first cycle of the loop we initialize
                // eveything.
                //
                // /////////////////////////////////////////////////////////////////////
                final ImageTypeSpecifier its = ((ImageTypeSpecifier) r.getImageTypes(0).next());
                boolean skipFeature = false;
                if (globEnvelope == null) {
                    // /////////////////////////////////////////////////////////////////////
                    //
                    // at the first step we initialize everything that we will
                    // reuse afterwards starting with color models, sample
                    // models, crs, etc....
                    //
                    // /////////////////////////////////////////////////////////////////////
                    defaultCM = its.getColorModel();
                    if (defaultCM instanceof IndexColorModel) {
                        IndexColorModel icm = (IndexColorModel) defaultCM;
                        int numBands = defaultCM.getNumColorComponents();
                        defaultPalette = new byte[3][icm.getMapSize()];
                        icm.getReds(defaultPalette[0]);
                        icm.getGreens(defaultPalette[0]);
                        icm.getBlues(defaultPalette[0]);
                        if (numBands == 4)
                            icm.getAlphas(defaultPalette[0]);

                    }
                    defaultSM = its.getSampleModel();
                    defaultCRS = actualCRS;
                    globEnvelope = new GeneralEnvelope(envelope);

                    // /////////////////////////////////////////////////////////////////////
                    //
                    // getting information about resolution
                    //
                    // /////////////////////////////////////////////////////////////////////

                    // //
                    //
                    // get the dimension of the hr image and build the model
                    // as well as
                    // computing the resolution
                    // //
                    // resetting reader and recreating stream, turnaround for a
                    // strange imageio bug
                    r.reset();
                    try {
                        inStream.reset();
                    } catch (IOException e) {
                        inStream = ImageIO.createImageInputStream(fileBeingProcessed);
                    }
                    //let's check if we got something now
                    if (inStream == null) {
                        //skip file
                        if (LOGGER.isLoggable(Level.WARNING))
                            LOGGER.warning("Skipping file " + fileBeingProcessed.toString());
                        continue;
                    }
                    r.setInput(inStream);
                    numberOfLevels = r.getNumImages(true);
                    resolutionLevels = new double[2][numberOfLevels];
                    double[] res = getResolution(envelope, new Rectangle(r.getWidth(0), r.getHeight(0)),
                            defaultCRS);
                    resolutionLevels[0][0] = res[0];
                    resolutionLevels[1][0] = res[1];

                    // resolutions levels
                    if (numberOfLevels > 1) {

                        for (int k = 0; k < numberOfLevels; k++) {
                            res = getResolution(envelope, new Rectangle(r.getWidth(k), r.getHeight(k)),
                                    defaultCRS);
                            resolutionLevels[0][k] = res[0];
                            resolutionLevels[1][k] = res[1];
                        }
                    }

                    // /////////////////////////////////////////////////////////////////////
                    //
                    // creating the schema
                    //
                    // /////////////////////////////////////////////////////////////////////
                    final SimpleFeatureTypeBuilder featureBuilder = new SimpleFeatureTypeBuilder();
                    featureBuilder.setName("Flag");
                    featureBuilder.setNamespaceURI("http://www.geo-solutions.it/");
                    featureBuilder.add("location", String.class);
                    featureBuilder.add("the_geom", Polygon.class, this.actualCRS);
                    featureBuilder.setDefaultGeometry("the_geom");
                    final SimpleFeatureType simpleFeatureType = featureBuilder.buildFeatureType();
                    // create the schema for the new shape file
                    index.createSchema(simpleFeatureType);

                    // get a feature writer
                    fw = index.getFeatureWriter(t);
                } else {
                    // ////////////////////////////////////////////////////////
                    // 
                    // comparing ColorModel
                    // comparing SampeModel
                    // comparing CRSs
                    // ////////////////////////////////////////////////////////
                    globEnvelope.add(envelope);
                    actualCM = its.getColorModel();
                    actualSM = its.getSampleModel();
                    skipFeature = (i > 0 ? !(CRS.equalsIgnoreMetadata(defaultCRS, actualCRS)) : false);
                    if (skipFeature)
                        LOGGER.warning(new StringBuffer("Skipping image ").append(files.get(i))
                                .append(" because CRSs do not match.").toString());
                    skipFeature = checkColorModels(defaultCM, defaultPalette, actualCM);
                    if (skipFeature)
                        LOGGER.warning(new StringBuffer("Skipping image ").append(files.get(i))
                                .append(" because color models do not match.").toString());
                    // defaultCM.getNumComponents()==actualCM.getNumComponents()&&
                    // defaultCM.getClass().equals(actualCM.getClass())
                    // && defaultSM.getNumBands() == actualSM
                    // .getNumBands()
                    // && defaultSM.getDataType() == actualSM
                    // .getDataType() &&
                    //
                    // if (skipFeature)
                    // LOGGER
                    // .warning(new StringBuffer("Skipping image ")
                    // .append(files.get(i))
                    // .append(
                    // " because cm or sm does not match.")
                    // .toString());
                    // res = getResolution(envelope, new
                    // Rectangle(r.getWidth(0),
                    // r.getHeight(0)), defaultCRS);
                    // if (Math.abs((resX - res[0]) / resX) > EPS
                    // || Math.abs(resY - res[1]) > EPS) {
                    // LOGGER.warning(new StringBuffer("Skipping image
                    // ").append(
                    // files.get(i)).append(
                    // " because resolutions does not match.")
                    // .toString());
                    // skipFeature = true;
                    // }
                }

                // ////////////////////////////////////////////////////////
                //
                // STEP 4
                //
                // create and store features
                //
                // ////////////////////////////////////////////////////////
                if (!skipFeature) {

                    final SimpleFeature feature = fw.next();
                    feature.setAttribute(1,
                            geomFactory.toGeometry(new ReferencedEnvelope((Envelope) envelope)));
                    feature.setAttribute(
                            0, absolute
                                    ? new StringBuilder(this.locationPath).append(File.separatorChar)
                                            .append(validFileName).toString()
                                    : validFileName);
                    fw.write();

                    message = new StringBuffer("Done with file ").append(files.get(i));
                    if (LOGGER.isLoggable(Level.FINE)) {
                        LOGGER.fine(message.toString());
                    }
                    message.append('\n');
                    fireEvent(message.toString(), (((i + 1) * 99.0) / numFiles));
                    doneSomething = true;
                } else
                    skipFeature = false;

                // ////////////////////////////////////////////////////////
                //
                // STEP 5
                //
                // release resources
                //
                // ////////////////////////////////////////////////////////
                try {
                    inStream.close();
                } catch (Exception e) {
                    // ignore exception
                }
                try {
                    r.dispose();
                } catch (Exception e) {
                    // ignore exception
                }
                // release resources
                reader.dispose();

            } catch (IOException e) {
                fireException(e);
                break;
            } catch (ArrayIndexOutOfBoundsException e) {
                fireException(e);
                break;
            }

        }
        try {
            if (fw != null)
                fw.close();
            t.commit();
            t.close();
            index.dispose();
        } catch (IOException e) {
            LOGGER.log(Level.SEVERE, e.getLocalizedMessage(), e);
        }
        createPropertiesFiles(globEnvelope, doneSomething);
    } catch (SecurityException el) {
        fireException(el);
        return;
    } catch (IOException el) {
        fireException(el);
        return;
    } finally {
        try {
            if (handler != null)
                handler.close();
        } catch (Throwable e) {
            // ignore
        }

    }

}