List of usage examples for javax.xml.transform OutputKeys OMIT_XML_DECLARATION
String OMIT_XML_DECLARATION
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From source file:org.ojbc.util.camel.processor.audit.FederatedQueryAuditLogger.java
private String getStringFromDocument(Document doc) { try {//from w ww. j a v a 2s .c o m DOMSource domSource = new DOMSource(doc); StringWriter writer = new StringWriter(); StreamResult result = new StreamResult(writer); TransformerFactory tf = TransformerFactory.newInstance(); Transformer transformer = tf.newTransformer(); transformer.setOutputProperty(OutputKeys.INDENT, "yes"); transformer.setOutputProperty("{http://xml.apache.org/xslt}indent-amount", "4"); transformer.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "yes"); transformer.transform(domSource, result); return writer.toString(); } catch (TransformerException ex) { ex.printStackTrace(); return null; } }
From source file:org.ojbc.web.WebUtils.java
public static String returnStringFromFilePath(InputStream is) throws Exception { DocumentBuilderFactory docFactory = DocumentBuilderFactory.newInstance(); docFactory.setNamespaceAware(true);//from w w w. ja v a 2s . c o m DocumentBuilder docBuilder = docFactory.newDocumentBuilder(); Document doc = docBuilder.parse(is); // set up a transformer TransformerFactory transfac = TransformerFactory.newInstance(); Transformer trans = transfac.newTransformer(); trans.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "yes"); trans.setOutputProperty(OutputKeys.INDENT, "yes"); // create string from xml tree StringWriter sw = new StringWriter(); StreamResult result = new StreamResult(sw); DOMSource source = new DOMSource(doc); trans.transform(source, result); String xmlString = sw.toString(); return xmlString; }
From source file:org.okbqa.disambiguation.client.DBpediaSpotlightClient.java
public TemplateInterpretations extract(PseudoSPARQLTemplate pst) throws SpotlightException { TemplateInterpretations ret = new TemplateInterpretations(); TemplateInterpretation ti = new TemplateInterpretation(); ret.getInterpretations().add(ti);//w ww .jav a 2s . co m List<EntityBinding> bindings = ti.getEntityBindings(); // obtain variables that are rdf:Resource and their verbalizations List<String> resourceVariables = new ArrayList<String>(); for (EntitySlot es : pst.getSlots()) { if (es.getPredicate().equals("is") && es.getObject().equals("rdf:Resource")) resourceVariables.add(es.getSubject()); } Map<String, String> varToVerbalization = new HashMap<String, String>(); for (EntitySlot es : pst.getSlots()) { if (es.getPredicate().equals("verbalization") && resourceVariables.contains(es.getSubject())) { varToVerbalization.put(es.getSubject(), es.getObject()); } } // build a query for just the rdf:Resource variables String query = null; DocumentBuilderFactory docFactory = DocumentBuilderFactory.newInstance(); try { DocumentBuilder docBuilder = docFactory.newDocumentBuilder(); // root element Document doc = docBuilder.newDocument(); Element annotation = doc.createElement("annotation"); doc.appendChild(annotation); annotation.setAttribute("text", pst.getQuestion().replace("\"", """)); // surface forms for (String verbalization : varToVerbalization.values()) { Element surfaceForm = doc.createElement("surfaceForm"); annotation.appendChild(surfaceForm); surfaceForm.setAttribute("name", verbalization); surfaceForm.setAttribute("offset", String.valueOf(pst.getQuestion().indexOf(verbalization))); } Transformer transformer = TransformerFactory.newInstance().newTransformer(); transformer.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "yes"); StreamResult result = new StreamResult(new StringWriter()); transformer.transform(new DOMSource(doc), result); query = result.getWriter().toString(); } catch (Exception e) { e.printStackTrace(); query = ""; } try { String spotlightResponse = getResponse(API_URL + "rest/annotate/?" + "spotter=SpotXmlParser" + "&text=" + URLEncoder.encode(query, "utf-8")); JSONObject resultJSON = null; JSONArray entities = null; try { resultJSON = new JSONObject(spotlightResponse); ti.setScore(resultJSON.getDouble("@confidence")); entities = resultJSON.getJSONArray("Resources"); } catch (JSONException e) { throw new AnnotationException(e); } for (int i = 0; i < entities.length(); i++) { JSONObject entityJSON = entities.getJSONObject(i); Entity entity = Entity.fromJSON(entityJSON); bindings.add(new EntityBinding(entityJSON.getString("@surfaceForm"), entity)); } } catch (Exception e) { e.printStackTrace(); } return ret; }
From source file:org.opencastproject.metadata.dublincore.DublinCoreCatalogList.java
/** * Serialize a node to an input stream/*from ww w. j a va2 s . c om*/ * * @param node * the node to serialize * @return the serialized input stream */ private static InputStream nodeToString(Node node) { ByteArrayOutputStream outputStream = new ByteArrayOutputStream(); try { Transformer t = TransformerFactory.newInstance().newTransformer(); t.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "yes"); t.setOutputProperty(OutputKeys.INDENT, "yes"); t.transform(new DOMSource(node), new StreamResult(outputStream)); return new ByteArrayInputStream(outputStream.toByteArray()); } catch (TransformerException te) { System.out.println("nodeToString Transformer Exception"); } return null; }
From source file:org.opencastproject.metadata.dublincore.DublinCoreTest.java
/** * Test method for saving the catalog.//w ww. j ava2s.co m */ @Test public void testNewInstance() { try { // Read the sample catalog FileInputStream in = new FileInputStream(catalogFile); DublinCoreCatalog dcSample = new DublinCoreCatalogImpl(in); IOUtils.closeQuietly(in); // Create a new catalog and fill it with a few fields DublinCoreCatalog dcNew = DublinCoreCatalogImpl.newInstance(); dcTempFile1 = new File(FileSupport.getTempDirectory(), Long.toString(System.currentTimeMillis())); // Add the required fields dcNew.add(PROPERTY_IDENTIFIER, dcSample.getFirst(PROPERTY_IDENTIFIER)); dcNew.add(PROPERTY_TITLE, dcSample.getFirst(PROPERTY_TITLE, DublinCore.LANGUAGE_UNDEFINED), DublinCore.LANGUAGE_UNDEFINED); // Add an additional field dcNew.add(PROPERTY_PUBLISHER, dcSample.getFirst(PROPERTY_PUBLISHER)); // Add a null-value field try { dcNew.add(PROPERTY_CONTRIBUTOR, (String) null); fail(); } catch (IllegalArgumentException e) { } // Add a field with an encoding scheme dcNew.add(PROPERTY_LICENSE, new DublinCoreValue("http://www.opencastproject.org/license", DublinCore.LANGUAGE_UNDEFINED, ENC_SCHEME_URI)); // Don't forget to bind the namespace... dcNew.bindPrefix("octest", "http://www.opencastproject.org/octest"); dcNew.add(PROPERTY_PROMOTED, new DublinCoreValue("true", DublinCore.LANGUAGE_UNDEFINED, new EName("http://www.opencastproject.org/octest", "Boolean"))); try { dcNew.add(PROPERTY_PROMOTED, new DublinCoreValue("true", DublinCore.LANGUAGE_UNDEFINED, new EName("http://www.opencastproject.org/enc-scheme", "Boolean"))); fail(); } catch (NamespaceBindingException e) { // Ok. This exception is expected to occur } // Store the catalog TransformerFactory transfac = TransformerFactory.newInstance(); Transformer trans = transfac.newTransformer(); trans.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "yes"); trans.setOutputProperty(OutputKeys.METHOD, "xml"); FileWriter sw = new FileWriter(dcTempFile1); StreamResult result = new StreamResult(sw); DOMSource source = new DOMSource(dcNew.toXml()); trans.transform(source, result); // Re-read the saved catalog and test for its content DublinCoreCatalog dcNewFromDisk = new DublinCoreCatalogImpl(dcTempFile1.toURI().toURL().openStream()); assertEquals(dcSample.getFirst(PROPERTY_IDENTIFIER), dcNewFromDisk.getFirst(PROPERTY_IDENTIFIER)); assertEquals(dcSample.getFirst(PROPERTY_TITLE, "en"), dcNewFromDisk.getFirst(PROPERTY_TITLE, "en")); assertEquals(dcSample.getFirst(PROPERTY_PUBLISHER), dcNewFromDisk.getFirst(PROPERTY_PUBLISHER)); } catch (IOException e) { fail("Error creating the catalog: " + e.getMessage()); } catch (ParserConfigurationException e) { fail("Error creating a parser for the catalog: " + e.getMessage()); } catch (TransformerException e) { fail("Error saving the catalog: " + e.getMessage()); } }
From source file:org.opencastproject.metadata.dublincore.DublinCoreTest.java
/** * Test method for {@link org.opencastproject.metadata.dublincore.DublinCoreCatalogImpl#save()} . *//* ww w .j a v a2 s .c o m*/ @Test(expected = IllegalStateException.class) public void testRequiredFields() { try { // Read the sample catalog FileInputStream in = new FileInputStream(catalogFile); DublinCoreCatalog dcSample = new DublinCoreCatalogImpl(in); IOUtils.closeQuietly(in); // Create a new catalog and fill it with a few fields dcTempFile2 = new File(FileSupport.getTempDirectory(), Long.toString(System.currentTimeMillis())); DublinCoreCatalog dcNew = new DublinCoreCatalogImpl(); // Add the required fields but the title dcNew.set(PROPERTY_IDENTIFIER, dcSample.getFirst(PROPERTY_IDENTIFIER)); // Add an additional field dcNew.set(PROPERTY_PUBLISHER, dcSample.getFirst(PROPERTY_PUBLISHER)); // Store the catalog TransformerFactory transfac = TransformerFactory.newInstance(); Transformer trans = transfac.newTransformer(); trans.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "yes"); trans.setOutputProperty(OutputKeys.METHOD, "xml"); FileWriter sw = new FileWriter(dcTempFile2); StreamResult result = new StreamResult(sw); DOMSource source = new DOMSource(dcNew.toXml()); trans.transform(source, result); fail("Required field was missing but not reported!"); } catch (IOException e) { fail("Error creating the catalog: " + e.getMessage()); } catch (ParserConfigurationException e) { fail("Error creating a parser for the catalog: " + e.getMessage()); } catch (TransformerException e) { fail("Error saving the catalog: " + e.getMessage()); } }
From source file:org.opendatakit.services.submissions.provider.SubmissionProvider.java
/** * The incoming URI is of the form:/* ww w . ja va 2 s.c o m*/ * ..../appName/tableId/instanceId?formId=&formVersion= * * where instanceId is the DataTableColumns._ID */ @SuppressWarnings("unchecked") @Override public ParcelFileDescriptor openFile(@NonNull Uri uri, @NonNull String mode) throws FileNotFoundException { possiblyWaitForContentProviderDebugger(); final boolean asXml = uri.getAuthority().equalsIgnoreCase(ProviderConsts.XML_SUBMISSION_AUTHORITY); if (mode != null && !mode.equals("r")) { throw new IllegalArgumentException("Only read access is supported"); } // URI == ..../appName/tableId/instanceId?formId=&formVersion= List<String> segments = uri.getPathSegments(); if (segments.size() != 4) { throw new IllegalArgumentException("Unknown URI (incorrect number of path segments!) " + uri); } PropertyManager propertyManager = new PropertyManager(getContext()); final String appName = segments.get(0); ODKFileUtils.verifyExternalStorageAvailability(); ODKFileUtils.assertDirectoryStructure(appName); WebLoggerIf logger = WebLogger.getLogger(appName); final String tableId = segments.get(1); final String instanceId = segments.get(2); final String submissionInstanceId = segments.get(3); PropertiesSingleton props = CommonToolProperties.get(getContext(), appName); String userEmail = props.getProperty(CommonToolProperties.KEY_ACCOUNT); String username = props.getProperty(CommonToolProperties.KEY_USERNAME); String activeUser = props.getActiveUser(); String rolesList = props.getProperty(CommonToolProperties.KEY_ROLES_LIST); String currentLocale = props.getLocale(); DbHandle dbHandleName = OdkConnectionFactorySingleton.getOdkConnectionFactoryInterface() .generateInternalUseDbHandle(); OdkConnectionInterface db = null; try { // +1 referenceCount if db is returned (non-null) db = OdkConnectionFactorySingleton.getOdkConnectionFactoryInterface().getConnection(appName, dbHandleName); boolean success = false; try { success = ODKDatabaseImplUtils.get().hasTableId(db, tableId); } catch (Exception e) { logger.printStackTrace(e); throw new SQLException("Unknown URI (exception testing for tableId) " + uri); } if (!success) { throw new SQLException("Unknown URI (missing data table for tableId) " + uri); } // Get the table properties specific to XML submissions String xmlInstanceName = null; String xmlRootElementName = null; String xmlDeviceIdPropertyName = null; String xmlUserIdPropertyName = null; String xmlBase64RsaPublicKey = null; try { Cursor c = null; try { c = db.query(DatabaseConstants.KEY_VALUE_STORE_ACTIVE_TABLE_NAME, new String[] { KeyValueStoreColumns.KEY, KeyValueStoreColumns.VALUE }, KeyValueStoreColumns.TABLE_ID + "=? AND " + KeyValueStoreColumns.PARTITION + "=? AND " + KeyValueStoreColumns.ASPECT + "=? AND " + KeyValueStoreColumns.KEY + " IN (?,?,?,?,?)", new String[] { tableId, KeyValueStoreConstants.PARTITION_TABLE, KeyValueStoreConstants.ASPECT_DEFAULT, KeyValueStoreConstants.XML_INSTANCE_NAME, KeyValueStoreConstants.XML_ROOT_ELEMENT_NAME, KeyValueStoreConstants.XML_DEVICE_ID_PROPERTY_NAME, KeyValueStoreConstants.XML_USER_ID_PROPERTY_NAME, KeyValueStoreConstants.XML_BASE64_RSA_PUBLIC_KEY }, null, null, null, null); c.moveToFirst(); if (c.getCount() > 0) { int idxKey = c.getColumnIndex(KeyValueStoreColumns.KEY); int idxValue = c.getColumnIndex(KeyValueStoreColumns.VALUE); do { String key = c.getString(idxKey); String value = c.getString(idxValue); if (KeyValueStoreConstants.XML_INSTANCE_NAME.equals(key)) { xmlInstanceName = value; } else if (KeyValueStoreConstants.XML_ROOT_ELEMENT_NAME.equals(key)) { xmlRootElementName = value; } else if (KeyValueStoreConstants.XML_DEVICE_ID_PROPERTY_NAME.equals(key)) { xmlDeviceIdPropertyName = value; } else if (KeyValueStoreConstants.XML_USER_ID_PROPERTY_NAME.equals(key)) { xmlUserIdPropertyName = value; } else if (KeyValueStoreConstants.XML_BASE64_RSA_PUBLIC_KEY.equals(key)) { xmlBase64RsaPublicKey = value; } } while (c.moveToNext()); } } finally { c.close(); c = null; } OrderedColumns orderedDefns = ODKDatabaseImplUtils.get().getUserDefinedColumns(db, tableId); // Retrieve the values of the record to be emitted... HashMap<String, Object> values = new HashMap<String, Object>(); // issue query to retrieve the most recent non-checkpoint data record // for the instanceId StringBuilder b = new StringBuilder(); b.append("SELECT * FROM ").append(tableId).append(" as T WHERE ").append(DataTableColumns.ID) .append("=?").append(" AND ").append(DataTableColumns.SAVEPOINT_TYPE) .append(" IS NOT NULL AND ").append(DataTableColumns.SAVEPOINT_TIMESTAMP) .append("=(SELECT max(V.").append(DataTableColumns.SAVEPOINT_TIMESTAMP).append(") FROM ") .append(tableId).append(" as V WHERE V.").append(DataTableColumns.ID).append("=T.") .append(DataTableColumns.ID).append(" AND V.").append(DataTableColumns.SAVEPOINT_TYPE) .append(" IS NOT NULL").append(")"); String[] selectionArgs = new String[] { instanceId }; FileSet freturn = new FileSet(appName); String datestamp = null; try { ODKDatabaseImplUtils.AccessContext accessContext = ODKDatabaseImplUtils.get() .getAccessContext(db, tableId, activeUser, rolesList); c = ODKDatabaseImplUtils.get().rawQuery(db, b.toString(), selectionArgs, null, accessContext); b.setLength(0); if (c.moveToFirst() && c.getCount() == 1) { String rowETag = null; String filterType = null; String filterValue = null; String formId = null; String locale = null; String savepointType = null; String savepointCreator = null; String savepointTimestamp = null; String instanceName = null; // OK. we have the record -- work through all the terms for (int i = 0; i < c.getColumnCount(); ++i) { ColumnDefinition defn = null; String columnName = c.getColumnName(i); try { defn = orderedDefns.find(columnName); } catch (IllegalArgumentException e) { // ignore... } if (defn != null && !c.isNull(i)) { if (xmlInstanceName != null && defn.getElementName().equals(xmlInstanceName)) { instanceName = CursorUtils.getIndexAsString(c, i); } // user-defined column ElementType type = defn.getType(); ElementDataType dataType = type.getDataType(); logger.i(t, "element type: " + defn.getElementType()); if (dataType == ElementDataType.integer) { Integer value = CursorUtils.getIndexAsType(c, Integer.class, i); putElementValue(values, defn, value); } else if (dataType == ElementDataType.number) { Double value = CursorUtils.getIndexAsType(c, Double.class, i); putElementValue(values, defn, value); } else if (dataType == ElementDataType.bool) { Integer tmp = CursorUtils.getIndexAsType(c, Integer.class, i); Boolean value = tmp == null ? null : (tmp != 0); putElementValue(values, defn, value); } else if (type.getElementType().equals("date")) { String value = CursorUtils.getIndexAsString(c, i); String jrDatestamp = (value == null) ? null : (new SimpleDateFormat(ISO8601_DATE_ONLY_FORMAT, Locale.US)) .format(new Date(TableConstants.milliSecondsFromNanos(value))); putElementValue(values, defn, jrDatestamp); } else if (type.getElementType().equals("dateTime")) { String value = CursorUtils.getIndexAsString(c, i); String jrDatestamp = (value == null) ? null : (new SimpleDateFormat(ISO8601_DATE_FORMAT, Locale.US)) .format(new Date(TableConstants.milliSecondsFromNanos(value))); putElementValue(values, defn, jrDatestamp); } else if (type.getElementType().equals("time")) { String value = CursorUtils.getIndexAsString(c, i); putElementValue(values, defn, value); } else if (dataType == ElementDataType.array) { ArrayList<Object> al = CursorUtils.getIndexAsType(c, ArrayList.class, i); putElementValue(values, defn, al); } else if (dataType == ElementDataType.string) { String value = CursorUtils.getIndexAsString(c, i); putElementValue(values, defn, value); } else /* unrecognized */ { throw new IllegalStateException( "unrecognized data type: " + defn.getElementType()); } } else if (columnName.equals(DataTableColumns.SAVEPOINT_TIMESTAMP)) { savepointTimestamp = CursorUtils.getIndexAsString(c, i); } else if (columnName.equals(DataTableColumns.ROW_ETAG)) { rowETag = CursorUtils.getIndexAsString(c, i); } else if (columnName.equals(DataTableColumns.FILTER_TYPE)) { filterType = CursorUtils.getIndexAsString(c, i); } else if (columnName.equals(DataTableColumns.FILTER_VALUE)) { filterValue = CursorUtils.getIndexAsString(c, i); } else if (columnName.equals(DataTableColumns.FORM_ID)) { formId = CursorUtils.getIndexAsString(c, i); } else if (columnName.equals(DataTableColumns.LOCALE)) { locale = CursorUtils.getIndexAsString(c, i); } else if (columnName.equals(DataTableColumns.FORM_ID)) { formId = CursorUtils.getIndexAsString(c, i); } else if (columnName.equals(DataTableColumns.SAVEPOINT_TYPE)) { savepointType = CursorUtils.getIndexAsString(c, i); } else if (columnName.equals(DataTableColumns.SAVEPOINT_CREATOR)) { savepointCreator = CursorUtils.getIndexAsString(c, i); } } // OK got all the values into the values map -- emit // contents b.setLength(0); File submissionXml = new File(ODKFileUtils.getInstanceFolder(appName, tableId, instanceId), (asXml ? "submission.xml" : "submission.json")); File manifest = new File(ODKFileUtils.getInstanceFolder(appName, tableId, instanceId), "manifest.json"); submissionXml.delete(); manifest.delete(); freturn.instanceFile = submissionXml; if (asXml) { // Pre-processing -- collapse all geopoints into a // string-valued representation for (ColumnDefinition defn : orderedDefns.getColumnDefinitions()) { ElementType type = defn.getType(); ElementDataType dataType = type.getDataType(); if (dataType == ElementDataType.object && (type.getElementType().equals("geopoint") || type.getElementType().equals("mimeUri"))) { Map<String, Object> parent = null; List<ColumnDefinition> parents = new ArrayList<ColumnDefinition>(); ColumnDefinition d = defn.getParent(); while (d != null) { parents.add(d); d = d.getParent(); } parent = values; for (int i = parents.size() - 1; i >= 0; --i) { Object o = parent.get(parents.get(i).getElementName()); if (o == null) { parent = null; break; } parent = (Map<String, Object>) o; } if (parent != null) { Object o = parent.get(defn.getElementName()); if (o != null) { if (type.getElementType().equals("geopoint")) { Map<String, Object> geopoint = (Map<String, Object>) o; // OK. we have geopoint -- get the // lat, long, alt, etc. Double latitude = (Double) geopoint.get("latitude"); Double longitude = (Double) geopoint.get("longitude"); Double altitude = (Double) geopoint.get("altitude"); Double accuracy = (Double) geopoint.get("accuracy"); String gpt = "" + latitude + " " + longitude + " " + altitude + " " + accuracy; parent.put(defn.getElementName(), gpt); } else if (type.getElementType().equals("mimeUri")) { Map<String, Object> mimeuri = (Map<String, Object>) o; String uriFragment = (String) mimeuri.get("uriFragment"); String contentType = (String) mimeuri.get("contentType"); if (uriFragment != null) { File f = ODKFileUtils.getAsFile(appName, uriFragment); if (f.equals(manifest)) { throw new IllegalStateException( "Unexpected collision with manifest.json"); } freturn.addAttachmentFile(f, contentType); parent.put(defn.getElementName(), f.getName()); } } else { throw new IllegalStateException("Unhandled transform case"); } } } } } datestamp = (new SimpleDateFormat(ISO8601_DATE_FORMAT, Locale.US)) .format(new Date(TableConstants.milliSecondsFromNanos(savepointTimestamp))); // For XML, we traverse the map to serialize it DocumentBuilderFactory dbf = DocumentBuilderFactory.newInstance(); DocumentBuilder docBuilder = dbf.newDocumentBuilder(); Document d = docBuilder.newDocument(); d.setXmlStandalone(true); Element e = d.createElement((xmlRootElementName == null) ? "data" : xmlRootElementName); d.appendChild(e); e.setAttribute("id", tableId); DynamicPropertiesCallback cb = new DynamicPropertiesCallback(appName, tableId, instanceId, activeUser, currentLocale, username, userEmail); int idx = 0; Element meta = d.createElementNS(XML_OPENROSA_NAMESPACE, "meta"); meta.setPrefix("jr"); Element v = d.createElementNS(XML_OPENROSA_NAMESPACE, "instanceID"); Text txtNode = d.createTextNode(submissionInstanceId); v.appendChild(txtNode); meta.appendChild(v); if (xmlDeviceIdPropertyName != null) { String deviceId = propertyManager.getSingularProperty(xmlDeviceIdPropertyName, cb); if (deviceId != null) { v = d.createElementNS(XML_OPENROSA_NAMESPACE, "deviceID"); txtNode = d.createTextNode(deviceId); v.appendChild(txtNode); meta.appendChild(v); } } if (xmlUserIdPropertyName != null) { String userId = propertyManager.getSingularProperty(xmlUserIdPropertyName, cb); if (userId != null) { v = d.createElementNS(XML_OPENROSA_NAMESPACE, "userID"); txtNode = d.createTextNode(userId); v.appendChild(txtNode); meta.appendChild(v); } } v = d.createElementNS(XML_OPENROSA_NAMESPACE, "timeEnd"); txtNode = d.createTextNode(datestamp); v.appendChild(txtNode); meta.appendChild(v); // these are extra metadata tags... if (instanceName != null) { v = d.createElement("instanceName"); txtNode = d.createTextNode(instanceName); v.appendChild(txtNode); meta.appendChild(v); } else { v = d.createElement("instanceName"); txtNode = d.createTextNode(savepointTimestamp); v.appendChild(txtNode); meta.appendChild(v); } // these are extra metadata tags... // rowID v = d.createElement("rowID"); txtNode = d.createTextNode(instanceId); v.appendChild(txtNode); meta.appendChild(v); // rowETag v = d.createElement("rowETag"); if (rowETag != null) { txtNode = d.createTextNode(rowETag); v.appendChild(txtNode); } meta.appendChild(v); // filterType v = d.createElement("filterType"); if (filterType != null) { txtNode = d.createTextNode(filterType); v.appendChild(txtNode); } meta.appendChild(v); // filterValue v = d.createElement("filterValue"); if (filterValue != null) { txtNode = d.createTextNode(filterValue); v.appendChild(txtNode); } meta.appendChild(v); // formID v = d.createElement("formID"); txtNode = d.createTextNode(formId); v.appendChild(txtNode); meta.appendChild(v); // locale v = d.createElement("locale"); txtNode = d.createTextNode(locale); v.appendChild(txtNode); meta.appendChild(v); // savepointType v = d.createElement("savepointType"); txtNode = d.createTextNode(savepointType); v.appendChild(txtNode); meta.appendChild(v); // savepointCreator v = d.createElement("savepointCreator"); if (savepointCreator != null) { txtNode = d.createTextNode(savepointCreator); v.appendChild(txtNode); } meta.appendChild(v); // savepointTimestamp v = d.createElement("savepointTimestamp"); txtNode = d.createTextNode(savepointTimestamp); v.appendChild(txtNode); meta.appendChild(v); // and insert the meta block into the XML e.appendChild(meta); idx = 3; ArrayList<String> entryNames = new ArrayList<String>(); entryNames.addAll(values.keySet()); Collections.sort(entryNames); for (String name : entryNames) { idx = generateXmlHelper(d, e, idx, name, values, logger); } TransformerFactory factory = TransformerFactory.newInstance(); Transformer transformer = factory.newTransformer(); Properties outFormat = new Properties(); outFormat.setProperty(OutputKeys.INDENT, "no"); outFormat.setProperty(OutputKeys.METHOD, "xml"); outFormat.setProperty(OutputKeys.OMIT_XML_DECLARATION, "yes"); outFormat.setProperty(OutputKeys.VERSION, "1.0"); outFormat.setProperty(OutputKeys.ENCODING, "UTF-8"); transformer.setOutputProperties(outFormat); ByteArrayOutputStream out = new ByteArrayOutputStream(); DOMSource domSource = new DOMSource(d.getDocumentElement()); StreamResult result = new StreamResult(out); transformer.transform(domSource, result); out.flush(); out.close(); b.append(out.toString(CharEncoding.UTF_8)); // OK we have the document in the builder (b). String doc = b.toString(); freturn.instanceFile = submissionXml; // see if the form is encrypted and we can // encrypt it... EncryptedFormInformation formInfo = EncryptionUtils.getEncryptedFormInformation(appName, tableId, xmlBase64RsaPublicKey, instanceId); if (formInfo != null) { File submissionXmlEnc = new File(submissionXml.getParentFile(), submissionXml.getName() + ".enc"); submissionXmlEnc.delete(); // if we are encrypting, the form cannot be // reopened afterward // and encrypt the submission (this is a // one-way operation)... if (!EncryptionUtils.generateEncryptedSubmission(freturn, doc, submissionXml, submissionXmlEnc, formInfo)) { return null; } // at this point, the freturn object has // been re-written with the encrypted media // and xml files. } else { exportFile(doc, submissionXml, logger); } } else { // Pre-processing -- collapse all mimeUri into filename for (ColumnDefinition defn : orderedDefns.getColumnDefinitions()) { ElementType type = defn.getType(); ElementDataType dataType = type.getDataType(); if (dataType == ElementDataType.object && type.getElementType().equals("mimeUri")) { Map<String, Object> parent = null; List<ColumnDefinition> parents = new ArrayList<ColumnDefinition>(); ColumnDefinition d = defn.getParent(); while (d != null) { parents.add(d); d = d.getParent(); } parent = values; for (int i = parents.size() - 1; i >= 0; --i) { Object o = parent.get(parents.get(i).getElementName()); if (o == null) { parent = null; break; } parent = (Map<String, Object>) o; } if (parent != null) { Object o = parent.get(defn.getElementName()); if (o != null) { if (dataType == ElementDataType.object && type.getElementType().equals("mimeUri")) { Map<String, Object> mimeuri = (Map<String, Object>) o; String uriFragment = (String) mimeuri.get("uriFragment"); String contentType = (String) mimeuri.get("contentType"); File f = ODKFileUtils.getAsFile(appName, uriFragment); if (f.equals(manifest)) { throw new IllegalStateException( "Unexpected collision with manifest.json"); } freturn.addAttachmentFile(f, contentType); parent.put(defn.getElementName(), f.getName()); } else { throw new IllegalStateException("Unhandled transform case"); } } } } } // For JSON, we construct the model, then emit model + // meta + data HashMap<String, Object> wrapper = new HashMap<String, Object>(); wrapper.put("tableId", tableId); wrapper.put("instanceId", instanceId); HashMap<String, Object> formDef = new HashMap<String, Object>(); formDef.put("table_id", tableId); formDef.put("model", orderedDefns.getDataModel()); wrapper.put("formDef", formDef); wrapper.put("data", values); wrapper.put("metadata", new HashMap<String, Object>()); HashMap<String, Object> elem = (HashMap<String, Object>) wrapper.get("metadata"); if (instanceName != null) { elem.put("instanceName", instanceName); } elem.put("saved", "COMPLETE"); elem.put("timestamp", datestamp); b.append(ODKFileUtils.mapper.writeValueAsString(wrapper)); // OK we have the document in the builder (b). String doc = b.toString(); exportFile(doc, submissionXml, logger); } exportFile(freturn.serializeUriFragmentList(getContext()), manifest, logger); return ParcelFileDescriptor.open(manifest, ParcelFileDescriptor.MODE_READ_ONLY); } } finally { if (c != null && !c.isClosed()) { c.close(); c = null; } } } catch (ParserConfigurationException e) { logger.printStackTrace(e); } catch (TransformerException e) { logger.printStackTrace(e); } catch (JsonParseException e) { logger.printStackTrace(e); } catch (JsonMappingException e) { logger.printStackTrace(e); } catch (IOException e) { logger.printStackTrace(e); } } finally { if (db != null) { try { // release the reference... // this does not necessarily close the db handle // or terminate any pending transaction db.releaseReference(); } finally { // this will release the final reference and close the database OdkConnectionFactorySingleton.getOdkConnectionFactoryInterface().removeConnection(appName, dbHandleName); } } } return null; }
From source file:org.opendatakit.services.utilities.EncryptionUtils.java
private static boolean writeSubmissionManifest(EncryptedFormInformation formInfo, File submissionXml, File submissionXmlEnc, List<MimeFile> mediaFiles) { FileOutputStream out = null;//from w ww . j a va 2s .co m try { DocumentBuilderFactory dbf = DocumentBuilderFactory.newInstance(); DocumentBuilder db = dbf.newDocumentBuilder(); Document d = db.newDocument(); d.setXmlStandalone(true); Element e = d.createElementNS(XML_ENCRYPTED_TAG_NAMESPACE, DATA); e.setPrefix(null); e.setAttribute(ID, formInfo.tableId); e.setAttribute(ENCRYPTED, "yes"); d.appendChild(e); Element c; c = d.createElementNS(XML_ENCRYPTED_TAG_NAMESPACE, BASE64_ENCRYPTED_KEY); Text txtNode; txtNode = d.createTextNode(formInfo.base64RsaEncryptedSymmetricKey); c.appendChild(txtNode); e.appendChild(c); c = d.createElementNS(XML_OPENROSA_NAMESPACE, META); c.setPrefix("orx"); { Element instanceTag = d.createElementNS(XML_OPENROSA_NAMESPACE, INSTANCE_ID); txtNode = d.createTextNode(formInfo.instanceId); instanceTag.appendChild(txtNode); c.appendChild(instanceTag); } e.appendChild(c); for (MimeFile file : mediaFiles) { c = d.createElementNS(XML_ENCRYPTED_TAG_NAMESPACE, MEDIA); Element fileTag = d.createElementNS(XML_ENCRYPTED_TAG_NAMESPACE, FILE); txtNode = d.createTextNode(file.file.getName()); fileTag.appendChild(txtNode); c.appendChild(fileTag); e.appendChild(c); } c = d.createElementNS(XML_ENCRYPTED_TAG_NAMESPACE, ENCRYPTED_XML_FILE); txtNode = d.createTextNode(submissionXmlEnc.getName()); c.appendChild(txtNode); e.appendChild(c); c = d.createElementNS(XML_ENCRYPTED_TAG_NAMESPACE, BASE64_ENCRYPTED_ELEMENT_SIGNATURE); txtNode = d.createTextNode(formInfo.getBase64EncryptedElementSignature()); c.appendChild(txtNode); e.appendChild(c); out = new FileOutputStream(submissionXml); TransformerFactory factory = TransformerFactory.newInstance(); Transformer transformer = factory.newTransformer(); Properties outFormat = new Properties(); outFormat.setProperty(OutputKeys.INDENT, "no"); outFormat.setProperty(OutputKeys.METHOD, "xml"); outFormat.setProperty(OutputKeys.OMIT_XML_DECLARATION, "yes"); outFormat.setProperty(OutputKeys.VERSION, "1.0"); outFormat.setProperty(OutputKeys.ENCODING, "UTF-8"); transformer.setOutputProperties(outFormat); DOMSource domSource = new DOMSource(d.getDocumentElement()); StreamResult result = new StreamResult(out); transformer.transform(domSource, result); out.flush(); out.close(); } catch (FileNotFoundException ex) { WebLogger.getLogger(formInfo.appName).printStackTrace(ex); WebLogger.getLogger(formInfo.appName).e(t, "Error writing submission.xml for encrypted submission: " + submissionXml.getParentFile().getName()); return false; } catch (UnsupportedEncodingException ex) { WebLogger.getLogger(formInfo.appName).printStackTrace(ex); WebLogger.getLogger(formInfo.appName).e(t, "Error writing submission.xml for encrypted submission: " + submissionXml.getParentFile().getName()); return false; } catch (IOException ex) { WebLogger.getLogger(formInfo.appName).printStackTrace(ex); WebLogger.getLogger(formInfo.appName).e(t, "Error writing submission.xml for encrypted submission: " + submissionXml.getParentFile().getName()); return false; } catch (TransformerConfigurationException ex) { WebLogger.getLogger(formInfo.appName).printStackTrace(ex); WebLogger.getLogger(formInfo.appName).e(t, "Error writing submission.xml for encrypted submission: " + submissionXml.getParentFile().getName()); return false; } catch (TransformerException ex) { WebLogger.getLogger(formInfo.appName).printStackTrace(ex); WebLogger.getLogger(formInfo.appName).e(t, "Error writing submission.xml for encrypted submission: " + submissionXml.getParentFile().getName()); return false; } catch (ParserConfigurationException ex) { WebLogger.getLogger(formInfo.appName).printStackTrace(ex); WebLogger.getLogger(formInfo.appName).e(t, "Error writing submission.xml for encrypted submission: " + submissionXml.getParentFile().getName()); return false; } finally { if (out != null) { try { out.close(); } catch (IOException e) { // ignore } } } return true; }
From source file:org.openestate.io.core.XmlUtils.java
/** * Write a {@link Document} to an {@link OutputStream}. * * @param doc/*from w ww . jav a 2 s . c o m*/ * the document to write * * @param output * the output, where the document is written to * * @param prettyPrint * if pretty printing is enabled for the generated XML code * * @throws TransformerException * if XML transformation failed */ public static void write(Document doc, OutputStream output, boolean prettyPrint) throws TransformerException { XmlUtils.clean(doc); Transformer transformer = TransformerFactory.newInstance().newTransformer(); transformer.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "no"); transformer.setOutputProperty(OutputKeys.METHOD, "xml"); transformer.setOutputProperty(OutputKeys.ENCODING, "UTF-8"); transformer.setOutputProperty(OutputKeys.STANDALONE, "yes"); transformer.setOutputProperty(OutputKeys.INDENT, (prettyPrint) ? "yes" : "no"); if (prettyPrint) { transformer.setOutputProperty("{http://xml.apache.org/xslt}indent-amount", "2"); } transformer.transform(new DOMSource(doc), new StreamResult(output)); }
From source file:org.openestate.io.core.XmlUtils.java
/** * Write a {@link Document} to a {@link Writer}. * * @param doc/* w w w.j a va2s .co m*/ * the document to write * * @param output * the output, where the document is written to * * @param prettyPrint * if pretty printing is enabled for the generated XML code * * @throws TransformerException * if XML transformation failed */ public static void write(Document doc, Writer output, boolean prettyPrint) throws TransformerException { XmlUtils.clean(doc); Transformer transformer = TransformerFactory.newInstance().newTransformer(); transformer.setOutputProperty(OutputKeys.OMIT_XML_DECLARATION, "no"); transformer.setOutputProperty(OutputKeys.METHOD, "xml"); transformer.setOutputProperty(OutputKeys.ENCODING, "UTF-8"); transformer.setOutputProperty(OutputKeys.STANDALONE, "yes"); transformer.setOutputProperty(OutputKeys.INDENT, (prettyPrint) ? "yes" : "no"); if (prettyPrint) { transformer.setOutputProperty("{http://xml.apache.org/xslt}indent-amount", "2"); } transformer.transform(new DOMSource(doc), new StreamResult(output)); }