Example usage for org.apache.commons.cli OptionBuilder create

Introduction

In this page you can find the example usage for org.apache.commons.cli OptionBuilder create.

Prototype

public static Option create(String opt) throws IllegalArgumentException

Source Link

Document

Create an Option using the current settings and with the specified Option char.

Usage

From source file:org.dcm4che2.tool.dcmhpqr.DcmHPQR.java

private static CommandLine parse(String[] args) {
    Options opts = new Options();

    OptionBuilder.withArgName("name");
    OptionBuilder.hasArg();/*  ww w  . j  ava  2s.  c  o  m*/
    OptionBuilder.withDescription("set device name, use DCMHPQR by default");
    opts.addOption(OptionBuilder.create("device"));

    OptionBuilder.withArgName("aet[@host]");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "set AET and local address of local " + "Application Entity, use device name and pick up any valid "
                    + "local address to bind the socket by default");
    opts.addOption(OptionBuilder.create("L"));

    OptionBuilder.withArgName("username");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "enable User Identity Negotiation with specified username and " + " optional passcode");
    opts.addOption(OptionBuilder.create("username"));

    OptionBuilder.withArgName("passcode");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "optional passcode for User Identity Negotiation, " + "only effective with option -username");
    opts.addOption(OptionBuilder.create("passcode"));

    opts.addOption("uidnegrsp", false,
            "request positive User Identity Negotation response, " + "only effective with option -username");

    OptionBuilder.withArgName("NULL|3DES|AES");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("enable TLS connection without, 3DES or AES encryption");
    opts.addOption(OptionBuilder.create("tls"));

    OptionGroup tlsProtocol = new OptionGroup();
    tlsProtocol.addOption(new Option("tls1", "disable the use of SSLv3 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("ssl3", "disable the use of TLSv1 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("no_tls1", "disable the use of TLSv1 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl3", "disable the use of SSLv3 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl2", "disable the use of SSLv2 for TLS connections"));
    opts.addOptionGroup(tlsProtocol);

    opts.addOption("noclientauth", false, "disable client authentification for TLS");

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("file path or URL of P12 or JKS keystore, resource:tls/test_sys_1.p12 by default");
    opts.addOption(OptionBuilder.create("keystore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for keystore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("keystorepw"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("password for accessing the key in the keystore, keystore password by default");
    opts.addOption(OptionBuilder.create("keypw"));

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("file path or URL of JKS truststore, resource:tls/mesa_certs.jks by default");
    opts.addOption(OptionBuilder.create("truststore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for truststore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("truststorepw"));

    opts.addOption("ivrle", false, "offer only Implicit VR Little Endian Transfer Syntax.");
    opts.addOption("pdv1", false, "send only one PDV in one P-Data-TF PDU, pack command and data "
            + "PDV in one P-DATA-TF PDU by default.");
    opts.addOption("tcpdelay", false, "set TCP_NODELAY socket option to false, true by default");

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for TCP connect, no timeout by default");
    opts.addOption(OptionBuilder.create("connectTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("delay in ms for Socket close after sending A-ABORT, 50ms by default");
    opts.addOption(OptionBuilder.create("soclosedelay"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("period in ms to check for outstanding DIMSE-RSP, 10s by default");
    opts.addOption(OptionBuilder.create("reaper"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving DIMSE-RSP, 10s by default");
    opts.addOption(OptionBuilder.create("rspTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-ASSOCIATE-AC, 5s by default");
    opts.addOption(OptionBuilder.create("acceptTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-RELEASE-RP, 5s by default");
    opts.addOption(OptionBuilder.create("releaseTO"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of received P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("rcvpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of sent P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("sndpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_RCVBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sorcvbuf"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_SNDBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sosndbuf"));

    OptionBuilder.withArgName("[seq/]attr=value");
    OptionBuilder.hasArgs();
    OptionBuilder.withValueSeparator('=');
    OptionBuilder.withDescription(
            "specify matching key. attr can be " + "specified by name or tag value (in hex), e.g. PatientName "
                    + "or 00100010. Attributes in nested Datasets can "
                    + "be specified by preceding the name/tag value of "
                    + "the sequence attribute, e.g. 0072000C/00080060 "
                    + "for Modality in the Hanging Protocol Definition " + "Sequence.");
    opts.addOption(OptionBuilder.create("q"));

    OptionBuilder.withArgName("Modality");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("specify matching Modality. Shortcut " + "for -q0072000C/00080060=<modality>.");
    opts.addOption(OptionBuilder.create("mod"));

    OptionBuilder.withArgName("Laterality");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("specify matching Laterality. Shortcut for -q0072000C/00200060=<lat>.");
    opts.addOption(OptionBuilder.create("lat"));

    OptionBuilder.withArgName("AnatomicRegion");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "specify matching Anatomic Region Sequence Code Value and Coding Scheme Designator. "
                    + "Code Value and Coding Scheme Designer are separated by ':'. For example, T1234:DCM4CHE.");
    opts.addOption(OptionBuilder.create("ar"));

    OptionBuilder.withArgName("ProcedureCode");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "specify matching Procedure Code Sequence Code Value and Coding Scheme Designator. "
                    + "Code Value and Coding Scheme Designer are separated by ':'. For example, T1234:DCM4CHE.");
    opts.addOption(OptionBuilder.create("pc"));

    OptionBuilder.withArgName("ReasonCode");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "specify matching Reason for Requested Procedure Sequence Code Value and Coding Scheme Designator. "
                    + "Code Value and Coding Scheme Designer are separated by ':'. For example, T1234:DCM4CHE.");
    opts.addOption(OptionBuilder.create("rfrp"));

    OptionBuilder.withArgName("HPUserIDCode");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "specify matching HP User ID Code Sequence Code Value and Coding Scheme Designator. "
                    + "Code Value and Coding Scheme Designer are separated by ':'. For example, T1234:DCM4CHE.");
    opts.addOption(OptionBuilder.create("user"));

    OptionBuilder.withArgName("attr");
    OptionBuilder.hasArgs();
    OptionBuilder.withDescription(
            "specify additional return key. attr can be specified by name or tag value (in hex).");
    opts.addOption(OptionBuilder.create("r"));

    OptionBuilder.withArgName("num");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "cancel query after receive of specified number of responses, no cancel by default");
    opts.addOption(OptionBuilder.create("C"));

    OptionBuilder.withArgName("aet");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("retrieve matching objects to specified move destination.");
    opts.addOption(OptionBuilder.create("dest"));

    opts.addOption("lowprior", false, "LOW priority of the C-FIND/C-MOVE operation, MEDIUM by default");
    opts.addOption("highprior", false, "HIGH priority of the C-FIND/C-MOVE operation, MEDIUM by default");
    opts.addOption("h", "help", false, "print this message");
    opts.addOption("V", "version", false, "print the version information and exit");
    CommandLine cl = null;
    try {
        cl = new GnuParser().parse(opts, args);
    } catch (ParseException e) {
        exit("dcmhp: " + e.getMessage());
        throw new RuntimeException("unreachable");
    }
    if (cl.hasOption('V')) {
        Package p = DcmHPQR.class.getPackage();
        System.out.println("dcmhpqr v" + p.getImplementationVersion());
        System.exit(0);
    }
    if (cl.hasOption('h') || cl.getArgList().size() != 1) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(USAGE, DESCRIPTION, opts, EXAMPLE);
        System.exit(0);
    }

    return cl;
}

From source file:org.dcm4che2.tool.dcmmwl.DcmMWL.java

private static CommandLine parse(String[] args) {
    Options opts = new Options();

    OptionBuilder.withArgName("name");
    OptionBuilder.hasArg();/*from w w w  . j  a va 2 s  .  c o  m*/
    OptionBuilder.withDescription("set device name, use DCMMWL by default");
    opts.addOption(OptionBuilder.create("device"));

    OptionBuilder.withArgName("aet[@host]");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "set AET and local address of local " + "Application Entity, use device name and pick up any valid "
                    + "local address to bind the socket by default");
    opts.addOption(OptionBuilder.create("L"));

    OptionBuilder.withArgName("username");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "enable User Identity Negotiation with specified username and " + " optional passcode");
    opts.addOption(OptionBuilder.create("username"));

    OptionBuilder.withArgName("passcode");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "optional passcode for User Identity Negotiation, " + "only effective with option -username");
    opts.addOption(OptionBuilder.create("passcode"));

    opts.addOption("uidnegrsp", false,
            "request positive User Identity Negotation response, " + "only effective with option -username");

    OptionBuilder.withArgName("NULL|3DES|AES");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("enable TLS connection without, 3DES or AES encryption");
    opts.addOption(OptionBuilder.create("tls"));

    OptionGroup tlsProtocol = new OptionGroup();
    tlsProtocol.addOption(new Option("tls1", "disable the use of SSLv3 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("ssl3", "disable the use of TLSv1 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("no_tls1", "disable the use of TLSv1 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl3", "disable the use of SSLv3 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl2", "disable the use of SSLv2 for TLS connections"));
    opts.addOptionGroup(tlsProtocol);

    opts.addOption("noclientauth", false, "disable client authentification for TLS");

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("file path or URL of P12 or JKS keystore, resource:tls/test_sys_1.p12 by default");
    opts.addOption(OptionBuilder.create("keystore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for keystore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("keystorepw"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("password for accessing the key in the keystore, keystore password by default");
    opts.addOption(OptionBuilder.create("keypw"));

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("file path or URL of JKS truststore, resource:tls/mesa_certs.jks by default");
    opts.addOption(OptionBuilder.create("truststore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for truststore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("truststorepw"));

    opts.addOption("ivrle", false, "offer only Implicit VR Little Endian Transfer Syntax.");
    opts.addOption("fuzzy", false, "negotiate support of fuzzy semantic person name attribute matching.");
    opts.addOption("pdv1", false, "send only one PDV in one P-Data-TF PDU, pack command and data "
            + "PDV in one P-DATA-TF PDU by default.");
    opts.addOption("tcpdelay", false, "set TCP_NODELAY socket option to false, true by default");

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for TCP connect, no timeout by default");
    opts.addOption(OptionBuilder.create("connectTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("delay in ms for Socket close after sending A-ABORT, 50ms by default");
    opts.addOption(OptionBuilder.create("soclosedelay"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("period in ms to check for outstanding DIMSE-RSP, 10s by default");
    opts.addOption(OptionBuilder.create("reaper"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving DIMSE-RSP, 10s by default");
    opts.addOption(OptionBuilder.create("rspTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-ASSOCIATE-AC, 5s by default");
    opts.addOption(OptionBuilder.create("acceptTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-RELEASE-RP, 5s by default");
    opts.addOption(OptionBuilder.create("releaseTO"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of received P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("rcvpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of sent P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("sndpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_RCVBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sorcvbuf"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_SNDBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sosndbuf"));

    OptionBuilder.withArgName("[seq/]attr=value");
    OptionBuilder.hasArgs();
    OptionBuilder.withValueSeparator('=');
    OptionBuilder.withDescription(
            "specify matching key. attr can be " + "specified by name or tag value (in hex), e.g. PatientName "
                    + "or 00100010. Attributes in nested Datasets can "
                    + "be specified by preceding the name/tag value of "
                    + "the sequence attribute, e.g. 00400100/00400009 "
                    + "for Scheduled Procedure Step ID in the Scheduled " + "Procedure Step Sequence.");
    opts.addOption(OptionBuilder.create("q"));

    OptionBuilder.withArgName("date");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "specify matching SPS start date " + "(range). Shortcut for -q00400100/00400002=<date>.");
    opts.addOption(OptionBuilder.create("date"));

    OptionBuilder.withArgName("time");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "specify matching SPS start time " + "(range). Shortcut for -q00400100/00400003=<time>.");
    opts.addOption(OptionBuilder.create("time"));

    OptionBuilder.withArgName("modality");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("specify matching Modality. Shortcut " + "for -q00400100/00080060=<modality>.");
    opts.addOption(OptionBuilder.create("mod"));

    OptionBuilder.withArgName("aet");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "specify matching Scheduled Station AE " + "title. Shortcut for -q00400100/00400001=<aet>.");
    opts.addOption(OptionBuilder.create("aet"));

    OptionBuilder.withArgName("attr");
    OptionBuilder.hasArgs();
    OptionBuilder.withDescription(
            "specify additional return key. attr can " + "be specified by name or tag value (in hex).");
    opts.addOption(OptionBuilder.create("r"));

    OptionBuilder.withArgName("num");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "cancel query after receive of specified " + "number of responses, no cancel by default");
    opts.addOption(OptionBuilder.create("C"));

    opts.addOption("lowprior", false, "LOW priority of the C-FIND operation, MEDIUM by default");
    opts.addOption("highprior", false, "HIGH priority of the C-FIND operation, MEDIUM by default");
    opts.addOption("h", "help", false, "print this message");
    opts.addOption("V", "version", false, "print the version information and exit");
    CommandLine cl = null;
    try {
        cl = new GnuParser().parse(opts, args);
    } catch (ParseException e) {
        exit("dcmmwl: " + e.getMessage());
        throw new RuntimeException("unreachable");
    }
    if (cl.hasOption('V')) {
        Package p = DcmMWL.class.getPackage();
        System.out.println("dcmqr v" + p.getImplementationVersion());
        System.exit(0);
    }
    if (cl.hasOption('h') || cl.getArgList().size() != 1) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(USAGE, DESCRIPTION, opts, EXAMPLE);
        System.exit(0);
    }

    return cl;
}

From source file:org.dcm4che2.tool.dcmof.DcmOF.java

private static CommandLine parse(String[] args) {
    Options opts = new Options();

    OptionBuilder.withArgName("name");
    OptionBuilder.hasArg();/*  ww  w .jav  a 2s .c  om*/
    OptionBuilder.withDescription("set device name, use DCMOF by default");
    opts.addOption(OptionBuilder.create("device"));

    OptionBuilder.withArgName("NULL|3DES|AES");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("enable TLS connection without, 3DES or AES encryption");
    opts.addOption(OptionBuilder.create("tls"));

    OptionGroup tlsProtocol = new OptionGroup();
    tlsProtocol.addOption(new Option("tls1", "disable the use of SSLv3 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("ssl3", "disable the use of TLSv1 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("no_tls1", "disable the use of TLSv1 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl3", "disable the use of SSLv3 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl2", "disable the use of SSLv2 for TLS connections"));
    opts.addOptionGroup(tlsProtocol);

    opts.addOption("noclientauth", false, "disable client authentification for TLS");

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("file path or URL of P12 or JKS keystore, resource:tls/test_sys_2.p12 by default");
    opts.addOption(OptionBuilder.create("keystore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for keystore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("keystorepw"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("password for accessing the key in the keystore, keystore password by default");
    opts.addOption(OptionBuilder.create("keypw"));

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("file path or URL of JKS truststore, resource:tls/mesa_certs.jks by default");
    opts.addOption(OptionBuilder.create("truststore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for truststore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("truststorepw"));

    OptionBuilder.withArgName("dir");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Activate MWL SCP, providing MWL Items stored in specified directory.");
    opts.addOption(OptionBuilder.create("mwl"));

    OptionGroup mpps = new OptionGroup();
    OptionBuilder.withArgName("dir");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Activate MPPS SCP, storing received MPPS in specified directory.");
    mpps.addOption(OptionBuilder.create("mpps"));
    OptionBuilder.withArgName("dir");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "Activate MPPS SCP, storing XML received MPPS in specified directory in XML format.");
    mpps.addOption(OptionBuilder.create("mppsxml"));
    opts.addOptionGroup(mpps);

    OptionGroup ian = new OptionGroup();
    OptionBuilder.withArgName("dir");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Activate IAN SCP, storing received IAN in specified directory.");
    ian.addOption(OptionBuilder.create("ian"));
    OptionBuilder.withArgName("dir");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("Activate IAN SCP, storing received IAN in specified directory in XML format.");
    ian.addOption(OptionBuilder.create("ianxml"));
    opts.addOptionGroup(ian);

    OptionGroup scn = new OptionGroup();
    OptionBuilder.withArgName("dir");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Activate SCN SCP, storing received SCN in specified directory.");
    scn.addOption(OptionBuilder.create("scn"));
    OptionBuilder.withArgName("dir");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("Activate SCN SCP, storing received SCN in specified directory in XML format.");
    scn.addOption(OptionBuilder.create("scnxml"));
    opts.addOptionGroup(scn);

    opts.addOption("c", "compact", false, "suppress additional whitespaces in XML output");
    opts.addOption("C", "comments", false, "include attribute names as comments in XML output");

    OptionGroup ts = new OptionGroup();
    OptionBuilder.withDescription("accept only default Transfer Syntax.");
    ts.addOption(OptionBuilder.create("defts"));
    OptionBuilder.withDescription("accept Explict VR Big Endian Transfer Syntax.");
    ts.addOption(OptionBuilder.create("bigendian"));
    opts.addOptionGroup(ts);

    OptionBuilder.withArgName("maxops");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "maximum number of outstanding operations performed " + "asynchronously, unlimited by default.");
    opts.addOption(OptionBuilder.create("async"));

    opts.addOption("pdv1", false, "send only one PDV in one P-Data-TF PDU, "
            + "pack command and data PDV in one P-DATA-TF PDU by default.");
    opts.addOption("tcpdelay", false, "set TCP_NODELAY socket option to false, true by default");

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("delay in ms for Socket close after sending A-ABORT, 50ms by default");
    opts.addOption(OptionBuilder.create("soclosedelay"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving -ASSOCIATE-RQ, 5s by default");
    opts.addOption(OptionBuilder.create("requestTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-RELEASE-RP, 5s by default");
    opts.addOption(OptionBuilder.create("releaseTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("period in ms to check for outstanding DIMSE-RSP, 10s by default");
    opts.addOption(OptionBuilder.create("reaper"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving DIMSE-RQ, 60s by default");
    opts.addOption(OptionBuilder.create("idleTO"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of received P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("rcvpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of sent P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("sndpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_RCVBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sorcvbuf"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_SNDBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sosndbuf"));

    opts.addOption("h", "help", false, "print this message");
    opts.addOption("V", "version", false, "print the version information and exit");

    CommandLine cl = null;
    try {
        cl = new GnuParser().parse(opts, args);
    } catch (ParseException e) {
        exit("dcmof: " + e.getMessage());
        throw new RuntimeException("unreachable");
    }
    if (cl.hasOption("V")) {
        Package p = DcmOF.class.getPackage();
        System.out.println("dcmof v" + p.getImplementationVersion());
        System.exit(0);
    }
    if (cl.hasOption("h") || cl.getArgList().size() == 0) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(USAGE, DESCRIPTION, opts, EXAMPLE);
        System.exit(0);
    }
    return cl;
}

From source file:org.dcm4che2.tool.dcmqr.DcmQR.java

private static CommandLine parse(String[] args) {
    Options opts = new Options();

    OptionBuilder.withArgName("name");
    OptionBuilder.hasArg();//  ww w .j  ava 2  s .  co  m
    OptionBuilder.withDescription("set device name, use DCMQR by default");
    opts.addOption(OptionBuilder.create("device"));

    OptionBuilder.withArgName("aet[@host][:port]");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set AET, local address and listening port of local"
            + "Application Entity, use device name and pick up any valid "
            + "local address to bind the socket by default");
    opts.addOption(OptionBuilder.create("L"));

    OptionBuilder.withArgName("username");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "enable User Identity Negotiation with specified username and " + " optional passcode");
    opts.addOption(OptionBuilder.create("username"));

    OptionBuilder.withArgName("passcode");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "optional passcode for User Identity Negotiation, " + "only effective with option -username");
    opts.addOption(OptionBuilder.create("passcode"));

    opts.addOption("uidnegrsp", false,
            "request positive User Identity Negotation response, " + "only effective with option -username");

    OptionBuilder.withArgName("NULL|3DES|AES");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("enable TLS connection without, 3DES or AES encryption");
    opts.addOption(OptionBuilder.create("tls"));

    OptionGroup tlsProtocol = new OptionGroup();
    tlsProtocol.addOption(new Option("tls1", "disable the use of SSLv3 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("ssl3", "disable the use of TLSv1 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("no_tls1", "disable the use of TLSv1 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl3", "disable the use of SSLv3 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl2", "disable the use of SSLv2 for TLS connections"));
    opts.addOptionGroup(tlsProtocol);

    opts.addOption("noclientauth", false, "disable client authentification for TLS");

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("file path or URL of P12 or JKS keystore, resource:tls/test_sys_1.p12 by default");
    opts.addOption(OptionBuilder.create("keystore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for keystore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("keystorepw"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("password for accessing the key in the keystore, keystore password by default");
    opts.addOption(OptionBuilder.create("keypw"));

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("file path or URL of JKS truststore, resource:tls/mesa_certs.jks by default");
    opts.addOption(OptionBuilder.create("truststore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for truststore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("truststorepw"));

    OptionBuilder.withArgName("aet");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("retrieve instances of matching entities by C-MOVE to specified destination.");
    opts.addOption(OptionBuilder.create("cmove"));

    opts.addOption("nocfind", false,
            "retrieve instances without previous query - unique keys must be specified by -q options");

    opts.addOption("cget", false, "retrieve instances of matching entities by C-GET.");

    OptionBuilder.withArgName("cuid[:ts]");
    OptionBuilder.hasArgs();
    OptionBuilder.withDescription("negotiate support of specified Storage SOP Class and Transfer "
            + "Syntaxes. The Storage SOP Class may be specified by its UID "
            + "or by one of following key words:\n" + "CR  - Computed Radiography Image Storage\n"
            + "CT  - CT Image Storage\n" + "MR  - MRImageStorage\n" + "US  - Ultrasound Image Storage\n"
            + "NM  - Nuclear Medicine Image Storage\n" + "PET - PET Image Storage\n"
            + "SC  - Secondary Capture Image Storage\n" + "XA  - XRay Angiographic Image Storage\n"
            + "XRF - XRay Radiofluoroscopic Image Storage\n"
            + "DX  - Digital X-Ray Image Storage for Presentation\n"
            + "MG  - Digital Mammography X-Ray Image Storage for Presentation\n"
            + "PR  - Grayscale Softcopy Presentation State Storage\n"
            + "KO  - Key Object Selection Document Storage\n"
            + "SR  - Basic Text Structured Report Document Storage\n"
            + "The Transfer Syntaxes may be specified by a comma "
            + "separated list of UIDs or by one of following key " + "words:\n"
            + "IVRLE - offer only Implicit VR Little Endian " + "Transfer Syntax\n"
            + "LE - offer Explicit and Implicit VR Little Endian " + "Transfer Syntax\n"
            + "BE - offer Explicit VR Big Endian Transfer Syntax\n"
            + "DEFL - offer Deflated Explicit VR Little " + "Endian Transfer Syntax\n"
            + "JPLL - offer JEPG Loss Less Transfer Syntaxes\n" + "JPLY - offer JEPG Lossy Transfer Syntaxes\n"
            + "MPEG2 - offer MPEG2 Transfer Syntax\n" + "NOPX - offer No Pixel Data Transfer Syntax\n"
            + "NOPXD - offer No Pixel Data Deflate Transfer Syntax\n"
            + "If only the Storage SOP Class is specified, all "
            + "Transfer Syntaxes listed above except No Pixel Data "
            + "and No Pixel Data Delflate Transfer Syntax are " + "offered.");
    opts.addOption(OptionBuilder.create("cstore"));

    OptionBuilder.withArgName("dir");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("store received objects into files in specified directory <dir>."
            + " Do not store received objects by default.");
    opts.addOption(OptionBuilder.create("cstoredest"));

    opts.addOption("ivrle", false, "offer only Implicit VR Little Endian Transfer Syntax.");

    OptionBuilder.withArgName("maxops");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "maximum number of outstanding C-MOVE-RQ " + "it may invoke asynchronously, 1 by default.");
    opts.addOption(OptionBuilder.create("async"));

    OptionBuilder.withArgName("maxops");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximum number of outstanding storage operations performed "
            + "asynchronously, unlimited by default.");
    opts.addOption(OptionBuilder.create("storeasync"));

    opts.addOption("noextneg", false, "disable extended negotiation.");
    opts.addOption("rel", false, "negotiate support of relational queries and retrieval.");
    opts.addOption("datetime", false, "negotiate support of combined date and time attribute range matching.");
    opts.addOption("fuzzy", false, "negotiate support of fuzzy semantic person name attribute matching.");

    opts.addOption("retall", false,
            "negotiate private FIND SOP Classes " + "to fetch all available attributes of matching entities.");
    opts.addOption("blocked", false, "negotiate private FIND SOP Classes "
            + "to return attributes of several matching entities per FIND " + "response.");
    opts.addOption("vmf", false, "negotiate private FIND SOP Classes to "
            + "return attributes of legacy CT/MR images of one series as " + "virtual multiframe object.");
    opts.addOption("pdv1", false, "send only one PDV in one P-Data-TF PDU, pack command and data "
            + "PDV in one P-DATA-TF PDU by default.");
    opts.addOption("tcpdelay", false, "set TCP_NODELAY socket option to false, true by default");

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for TCP connect, no timeout by default");
    opts.addOption(OptionBuilder.create("connectTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("delay in ms for Socket close after sending A-ABORT, 50ms by default");
    opts.addOption(OptionBuilder.create("soclosedelay"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("period in ms to check for outstanding DIMSE-RSP, 10s by default");
    opts.addOption(OptionBuilder.create("reaper"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving C-FIND-RSP, 60s by default");
    opts.addOption(OptionBuilder.create("cfindrspTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving C-MOVE-RSP and C-GET RSP, 600s by default");
    opts.addOption(OptionBuilder.create("cmoverspTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving C-GET-RSP and C-MOVE RSP, 600s by default");
    opts.addOption(OptionBuilder.create("cgetrspTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-ASSOCIATE-AC, 5s by default");
    opts.addOption(OptionBuilder.create("acceptTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-RELEASE-RP, 5s by default");
    opts.addOption(OptionBuilder.create("releaseTO"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of received P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("rcvpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of sent P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("sndpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_RCVBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sorcvbuf"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_SNDBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sosndbuf"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("minimal buffer size to write received object to file, 1KB by default");
    opts.addOption(OptionBuilder.create("filebuf"));

    OptionGroup qrlevel = new OptionGroup();

    OptionBuilder.withDescription("perform patient level query, multiple "
            + "exclusive with -S and -I, perform study level query " + "by default.");
    OptionBuilder.withLongOpt("patient");
    opts.addOption(OptionBuilder.create("P"));

    OptionBuilder.withDescription("perform series level query, multiple "
            + "exclusive with -P and -I, perform study level query " + "by default.");
    OptionBuilder.withLongOpt("series");
    opts.addOption(OptionBuilder.create("S"));

    OptionBuilder.withDescription("perform instance level query, multiple "
            + "exclusive with -P and -S, perform study level query " + "by default.");
    OptionBuilder.withLongOpt("image");
    opts.addOption(OptionBuilder.create("I"));

    OptionBuilder.withArgName("cuid");
    OptionBuilder.hasArgs();
    OptionBuilder.withDescription("negotiate addition private C-FIND SOP " + "class with specified UID");
    opts.addOption(OptionBuilder.create("cfind"));

    opts.addOptionGroup(qrlevel);

    OptionBuilder.withArgName("[seq/]attr=value");
    OptionBuilder.hasArgs();
    OptionBuilder.withValueSeparator('=');
    OptionBuilder.withDescription(
            "specify matching key. attr can be " + "specified by name or tag value (in hex), e.g. PatientName "
                    + "or 00100010. Attributes in nested Datasets can "
                    + "be specified by including the name/tag value of "
                    + "the sequence attribute, e.g. 00400275/00400009 "
                    + "for Scheduled Procedure Step ID in the Request " + "Attributes Sequence");
    opts.addOption(OptionBuilder.create("q"));

    OptionBuilder.withArgName("attr");
    OptionBuilder.hasArgs();
    OptionBuilder.withDescription(
            "specify additional return key. attr can " + "be specified by name or tag value (in hex).");
    opts.addOption(OptionBuilder.create("r"));

    OptionBuilder.withArgName("num");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "cancel query after receive of specified " + "number of responses, no cancel by default");
    opts.addOption(OptionBuilder.create("C"));

    OptionBuilder.withArgName("aet");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("retrieve matching objects to specified " + "move destination.");
    opts.addOption(OptionBuilder.create("cmove"));

    opts.addOption("evalRetrieveAET", false, "Only Move studies not allready stored on destination AET");
    opts.addOption("lowprior", false, "LOW priority of the C-FIND/C-MOVE operation, MEDIUM by default");
    opts.addOption("highprior", false, "HIGH priority of the C-FIND/C-MOVE operation, MEDIUM by default");

    OptionBuilder.withArgName("num");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("repeat query (and retrieve) several times");
    opts.addOption(OptionBuilder.create("repeat"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("delay in ms between repeated query (and retrieve), no delay by default");
    opts.addOption(OptionBuilder.create("repeatdelay"));

    opts.addOption("reuseassoc", false, "Reuse association for repeated query (and retrieve)");
    opts.addOption("closeassoc", false, "Close association between repeated query (and retrieve)");

    opts.addOption("h", "help", false, "print this message");
    opts.addOption("V", "version", false, "print the version information and exit");
    CommandLine cl = null;
    try {
        cl = new GnuParser().parse(opts, args);
    } catch (ParseException e) {
        exit("dcmqr: " + e.getMessage());
        throw new RuntimeException("unreachable");
    }
    if (cl.hasOption('V')) {
        Package p = DcmQR.class.getPackage();
        System.out.println("dcmqr v" + p.getImplementationVersion());
        System.exit(0);
    }
    if (cl.hasOption('h') || cl.getArgList().size() != 1) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(USAGE, DESCRIPTION, opts, EXAMPLE);
        System.exit(0);
    }

    return cl;
}

From source file:org.dcm4che2.tool.dcmsnd.DcmSnd.java

private static CommandLine parse(String[] args) throws Exception {
    Options opts = new Options();

    OptionBuilder.withArgName("name");
    OptionBuilder.hasArg();// ww  w.  j  a  v a  2  s.com
    OptionBuilder.withDescription("set device name, use DCMSND by default");
    opts.addOption(OptionBuilder.create("device"));

    OptionBuilder.withArgName("aet[@host][:port]");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set AET, local address and listening port of local "
            + "Application Entity, use device name and pick up any valid "
            + "local address to bind the socket by default");
    opts.addOption(OptionBuilder.create("L"));

    opts.addOption("ts1", false,
            "offer Default Transfer Syntax in " + "separate Presentation Context. By default offered with "
                    + "Explicit VR Little Endian TS in one PC.");

    opts.addOption("fileref", false,
            "send objects without pixel data, but with a reference to "
                    + "the DICOM file using DCM4CHE URI Referenced Transfer Syntax "
                    + "to import DICOM objects on a given file system to a DCM4CHEE " + "archive.");

    OptionBuilder.withArgName("username");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "enable User Identity Negotiation with specified username and " + " optional passcode");
    opts.addOption(OptionBuilder.create("username"));

    OptionBuilder.withArgName("passcode");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "optional passcode for User Identity Negotiation, " + "only effective with option -username");
    opts.addOption(OptionBuilder.create("passcode"));

    opts.addOption("uidnegrsp", false,
            "request positive User Identity Negotation response, " + "only effective with option -username");

    OptionBuilder.withArgName("NULL|3DES|AES");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("enable TLS connection without, 3DES or AES encryption");
    opts.addOption(OptionBuilder.create("tls"));

    OptionGroup tlsProtocol = new OptionGroup();
    tlsProtocol.addOption(new Option("tls1", "disable the use of SSLv3 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("ssl3", "disable the use of TLSv1 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("no_tls1", "disable the use of TLSv1 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl3", "disable the use of SSLv3 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl2", "disable the use of SSLv2 for TLS connections"));
    opts.addOptionGroup(tlsProtocol);

    opts.addOption("noclientauth", false, "disable client authentification for TLS");

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("file path or URL of P12 or JKS keystore, resource:tls/test_sys_2.p12 by default");
    opts.addOption(OptionBuilder.create("keystore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for keystore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("keystorepw"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("password for accessing the key in the keystore, keystore password by default");
    opts.addOption(OptionBuilder.create("keypw"));

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("file path or URL of JKS truststore, resource:tls/mesa_certs.jks by default");
    opts.addOption(OptionBuilder.create("truststore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for truststore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("truststorepw"));

    OptionBuilder.withArgName("aet@host:port");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("request storage commitment of (successfully) sent objects "
            + "afterwards in new association to specified remote " + "Application Entity");
    opts.addOption(OptionBuilder.create("stgcmtae"));

    opts.addOption("stgcmt", false,
            "request storage commitment of (successfully) sent objects " + "afterwards in same association");

    OptionBuilder.withArgName("attr=value");
    OptionBuilder.hasArgs();
    OptionBuilder.withValueSeparator('=');
    OptionBuilder.withDescription("Replace value of specified attribute "
            + "with specified value in transmitted objects. attr can be "
            + "specified by name or tag value (in hex), e.g. PatientName " + "or 00100010.");
    opts.addOption(OptionBuilder.create("set"));

    OptionBuilder.withArgName("sx1[:sx2[:sx3]");
    OptionBuilder.hasArgs();
    OptionBuilder.withValueSeparator(':');
    OptionBuilder.withDescription(
            "Suffix SOP [,Series [,Study]] " + "Instance UID with specified value[s] in transmitted objects.");
    opts.addOption(OptionBuilder.create("setuid"));

    OptionBuilder.withArgName("maxops");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximum number of outstanding operations it may invoke "
            + "asynchronously, unlimited by default.");
    opts.addOption(OptionBuilder.create("async"));

    opts.addOption("pdv1", false, "send only one PDV in one P-Data-TF PDU, "
            + "pack command and data PDV in one P-DATA-TF PDU by default.");
    opts.addOption("tcpdelay", false, "set TCP_NODELAY socket option to false, true by default");

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for TCP connect, no timeout by default");
    opts.addOption(OptionBuilder.create("connectTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("delay in ms for Socket close after sending A-ABORT, " + "50ms by default");
    opts.addOption(OptionBuilder.create("soclosedelay"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("delay in ms for closing the listening socket, " + "1000ms by default");
    opts.addOption(OptionBuilder.create("shutdowndelay"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("period in ms to check for outstanding DIMSE-RSP, " + "10s by default");
    opts.addOption(OptionBuilder.create("reaper"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving DIMSE-RSP, 10s by default");
    opts.addOption(OptionBuilder.create("rspTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-ASSOCIATE-AC, 5s by default");
    opts.addOption(OptionBuilder.create("acceptTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-RELEASE-RP, 5s by default");
    opts.addOption(OptionBuilder.create("releaseTO"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of received P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("rcvpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of sent P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("sndpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_RCVBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sorcvbuf"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_SNDBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sosndbuf"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("transcoder buffer size in KB, 1KB by default");
    opts.addOption(OptionBuilder.create("bufsize"));

    opts.addOption("lowprior", false, "LOW priority of the C-STORE operation, MEDIUM by default");
    opts.addOption("highprior", false, "HIGH priority of the C-STORE operation, MEDIUM by default");
    opts.addOption("h", "help", false, "print this message");
    opts.addOption("V", "version", false, "print the version information and exit");
    CommandLine cl = null;
    try {
        cl = new GnuParser().parse(opts, args);
    } catch (ParseException e) {
        exit("dcmsnd: " + e.getMessage());
        throw new RuntimeException("unreachable");
    }
    if (cl.hasOption('V')) {
        Package p = DcmSnd.class.getPackage();
        System.out.println("dcmsnd v" + p.getImplementationVersion());
        System.exit(0);
    }
    if (cl.hasOption('h') || cl.getArgList().size() < 2) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(USAGE, DESCRIPTION, opts, EXAMPLE);
        //System.exit( 0 );
        throw new RuntimeException();
    }
    return cl;
}

From source file:org.dcm4che2.tool.dcmups.DcmUPS.java

private static CommandLine parse(String[] args) {
    Options opts = new Options();

    OptionBuilder.withArgName("name");
    OptionBuilder.hasArg();/*from  w w  w  .j a v  a2 s.  com*/
    OptionBuilder.withDescription("set device name, use DCMGPWL by default");
    opts.addOption(OptionBuilder.create("device"));

    OptionBuilder.withArgName("aet[@host]");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set AET and local address of local Application Entity, use "
            + "device name and pick up any valid local address to bind the " + "socket by default");
    opts.addOption(OptionBuilder.create("L"));

    OptionBuilder.withArgName("username");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "enable User Identity Negotiation with specified username and " + " optional passcode");
    opts.addOption(OptionBuilder.create("username"));

    OptionBuilder.withArgName("passcode");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "optional passcode for User Identity Negotiation, " + "only effective with option -username");
    opts.addOption(OptionBuilder.create("passcode"));

    opts.addOption("uidnegrsp", false,
            "request positive User Identity Negotation response, " + "only effective with option -username");

    OptionBuilder.withArgName("NULL|3DES|AES");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("enable TLS connection without, 3DES or AES encryption");
    opts.addOption(OptionBuilder.create("tls"));

    OptionGroup tlsProtocol = new OptionGroup();
    tlsProtocol.addOption(new Option("tls1", "disable the use of SSLv3 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("ssl3", "disable the use of TLSv1 and SSLv2 for TLS connections"));
    tlsProtocol.addOption(new Option("no_tls1", "disable the use of TLSv1 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl3", "disable the use of SSLv3 for TLS connections"));
    tlsProtocol.addOption(new Option("no_ssl2", "disable the use of SSLv2 for TLS connections"));
    opts.addOptionGroup(tlsProtocol);

    opts.addOption("noclientauth", false, "disable client authentification for TLS");

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("file path or URL of P12 or JKS keystore, resource:tls/test_sys_1.p12 by default");
    opts.addOption(OptionBuilder.create("keystore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for keystore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("keystorepw"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("password for accessing the key in the keystore, keystore password by default");
    opts.addOption(OptionBuilder.create("keypw"));

    OptionBuilder.withArgName("file|url");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("file path or URL of JKS truststore, resource:tls/mesa_certs.jks by default");
    opts.addOption(OptionBuilder.create("truststore"));

    OptionBuilder.withArgName("password");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("password for truststore file, 'secret' by default");
    opts.addOption(OptionBuilder.create("truststorepw"));

    opts.addOption("ivrle", false, "offer only Implicit VR Little Endian Transfer Syntax.");
    opts.addOption("fuzzy", false, "negotiate support of fuzzy semantic person name attribute matching.");
    opts.addOption("pdv1", false, "send only one PDV in one P-Data-TF PDU, pack command and data "
            + "PDV in one P-DATA-TF PDU by default.");
    opts.addOption("tcpdelay", false, "set TCP_NODELAY socket option to false, true by default");

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for TCP connect, no timeout by default");
    opts.addOption(OptionBuilder.create("connectTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("delay in ms for Socket close after sending A-ABORT, 50ms by default");
    opts.addOption(OptionBuilder.create("soclosedelay"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("period in ms to check for outstanding DIMSE-RSP, 10s by default");
    opts.addOption(OptionBuilder.create("reaper"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving DIMSE-RSP, 10s by default");
    opts.addOption(OptionBuilder.create("rspTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-ASSOCIATE-AC, 5s by default");
    opts.addOption(OptionBuilder.create("acceptTO"));

    OptionBuilder.withArgName("ms");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("timeout in ms for receiving A-RELEASE-RP, 5s by default");
    opts.addOption(OptionBuilder.create("releaseTO"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of received P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("rcvpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("maximal length in KB of sent P-DATA-TF PDUs, 16KB by default");
    opts.addOption(OptionBuilder.create("sndpdulen"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_RCVBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sorcvbuf"));

    OptionBuilder.withArgName("KB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("set SO_SNDBUF socket option to specified value in KB");
    opts.addOption(OptionBuilder.create("sosndbuf"));

    OptionBuilder.withArgName("state");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("match/change UPS of/to specified <state>");
    opts.addOption(OptionBuilder.create("state"));

    OptionBuilder.withArgName("file");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("path to DICOM or XML file with UPS attributes to create or set.");
    opts.addOption(OptionBuilder.create("f"));

    OptionBuilder.withArgName("uid");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("SOP Instance UID of UPS. Required for "
            + "operation set, get, chstate, reqcancel, and for operation "
            + "subscribe/unsubscribe to/form receiving UPS events about a "
            + "specific UPS - and not subscribe/unsubscribe globally.");
    opts.addOption(OptionBuilder.create("iuid"));

    OptionBuilder.withArgName("uid");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Transaction UID.");
    opts.addOption(OptionBuilder.create("tuid"));

    OptionBuilder.withArgName("aet");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "Specifies AET of Requesting AE for " + "operation reqcancel and AET of Receiving AE for operation "
                    + "subscribe, unsubscribe and suspend.");
    opts.addOption(OptionBuilder.create("aet"));

    opts.addOption("dellock", false, "invoke operation subscribe with Deletion Lock.");

    OptionBuilder.withArgName("[seq/]attr=value");
    OptionBuilder.hasArgs();
    OptionBuilder.withValueSeparator('=');
    OptionBuilder.withDescription(
            "specify matching key. attr can be " + "specified by name or tag value (in hex), e.g. "
                    + "ScheduledProcedureStepStartDateTime or 00404005. "
                    + "Attributes in nested Datasets can be specified by "
                    + "including the name/tag value of the sequence attribute, "
                    + "e.g. 00404018/00080100 for Code Value in the Scheduled " + "Workitem Code Sequence.");
    opts.addOption(OptionBuilder.create("q"));

    OptionBuilder.withArgName("attr");
    OptionBuilder.hasArgs();
    OptionBuilder.withDescription(
            "specify return key. attr can be " + "specified by name or tag value (in hex). If no return key"
                    + "is specified, defaults are used for invoked find operation.");
    opts.addOption(OptionBuilder.create("r"));

    OptionGroup sopClass = new OptionGroup();
    sopClass.addOption(new Option("upspush",
            "Use UPS Push SOP Class to invoke operation. " + "Use appropriate SOP Class by default."));
    sopClass.addOption(new Option("upspull",
            "Use UPS Pull SOP Class to invoke operation. " + "Use appropriate SOP Class by default."));
    sopClass.addOption(new Option("upswatch",
            "Use UPS Watch SOP Class to invoke operation. " + "Use appropriate SOP Class by default."));
    opts.addOptionGroup(sopClass);

    OptionBuilder.withArgName("NORMAL|HIGH|LOW");
    OptionBuilder.hasArgs();
    OptionBuilder.withDescription("specify priority of the C-FIND " + "operation, NORMAL by default.");
    opts.addOption(OptionBuilder.create("findprior"));

    opts.addOption("h", "help", false, "print this message");
    opts.addOption("V", "version", false, "print the version information and exit");

    CommandLine cl = null;
    try {
        cl = new GnuParser().parse(opts, args);
    } catch (ParseException e) {
        exit("dcmups: " + e.getMessage());
        throw new RuntimeException("unreachable");
    }
    if (cl.hasOption('V')) {
        Package p = DcmUPS.class.getPackage();
        System.out.println("dcmups v" + p.getImplementationVersion());
        System.exit(0);
    }
    if (cl.hasOption('h')) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(USAGE, DESCRIPTION, opts, EXAMPLE);
        System.exit(0);
    }

    return cl;
}

From source file:org.dcm4che2.tool.dcmwado.DcmWado.java

private static CommandLine parse(String[] args) {
    Options opts = new Options();
    OptionBuilder.withArgName("suid:Suid:iuid");
    OptionBuilder.hasArgs(3);/*from   w ww .j  a  v a 2  s . c  o  m*/
    OptionBuilder.withValueSeparator(':');
    OptionBuilder.withDescription(
            "Retrieve object with given Study " + "Instance UID, Series Instance UID and SOP Instance UID.");
    opts.addOption(OptionBuilder.create("uid"));

    OptionBuilder.withArgName("Suid:iuid");
    OptionBuilder.hasArgs(2);
    OptionBuilder.withValueSeparator(':');
    OptionBuilder.withDescription("Series Instance UID and SOP Instance UID "
            + "of the presentation state storage object to be applied to the " + "image.");
    opts.addOption(OptionBuilder.create("pr"));

    opts.addOption("dcm", false, "Request DICOM object. (MIME type: application/dicom)");
    opts.addOption("jpeg", false, "Request JPEG image. (MIME type: image/jpeg)");
    opts.addOption("gif", false, "Request GIF image. (MIME type: image/gif)");
    opts.addOption("png", false, "Request PNG image. (MIME type: image/png)");
    opts.addOption("jp2", false, "Request JPEG 2000 image. (MIME type: image/jp2)");
    opts.addOption("mpeg", false, "Request MPEG video. (MIME type: video/mpeg)");
    opts.addOption("txt", false, "Request plain text document. (MIME type: text/plain)");
    opts.addOption("html", false, "Request HTML document. (MIME type: text/html)");
    opts.addOption("xml", false, "Request XML document. (MIME type: text/xml)");
    opts.addOption("rtf", false, "Request RTF document. (MIME type: text/rtf)");
    opts.addOption("pdf", false, "Request PDF document. (MIME type: application/pdf)");
    opts.addOption("cda1", false,
            "Request CDA Level 1 document. " + "(MIME type: application/x-hl7-cda-level-one+xml)");

    OptionBuilder.withArgName("type");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Request document with the specified MIME type."
            + "Alternative MIME types can be specified by additional -mime options.");
    opts.addOption(OptionBuilder.create("mime"));

    OptionBuilder.withArgName("uid");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Returned object shall be encoded with "
            + "the specified Transfer Syntax. Alternative Transfer Syntaxes "
            + "can be specified by additional -ts options.");
    opts.addOption(OptionBuilder.create("ts"));

    OptionBuilder.withArgName("name");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "Returned object shall be encoded with " + "specified Character set. Alternative Character sets "
                    + "can be specified by additional -charset options.");
    opts.addOption(OptionBuilder.create("charset"));

    opts.addOption("anonymize", false,
            "Remove all patient identification" + "information from returned DICOM Object");

    OptionBuilder.withArgName("type");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "Burn in patient information" + "(-annotation=patient) and/or technique information "
                    + "(-annotation=technique) in returned pixel data.");
    opts.addOption(OptionBuilder.create("annotation"));

    OptionBuilder.withArgName("num");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Maximal number of pixel rows in returned image.");
    opts.addOption(OptionBuilder.create("rows"));

    OptionBuilder.withArgName("num");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Maximal number of pixel columns in returned image.");
    opts.addOption(OptionBuilder.create("columns"));

    OptionBuilder.withArgName("num");
    OptionBuilder.hasArg();
    OptionBuilder
            .withDescription("Return single frame with that number " + "within a multi-frame image object.");
    opts.addOption(OptionBuilder.create("frame"));

    OptionBuilder.withArgName("x1:y1:x2:y2");
    OptionBuilder.hasArgs(4);
    OptionBuilder.withValueSeparator(':');
    OptionBuilder.withDescription("Return rectangular region of image "
            + "matrix specified by top left (x1,y1) and bottom right (x2,y2) "
            + "corner in relative coordinates within the range 0.0 to 1.0.");
    opts.addOption(OptionBuilder.create("window"));

    OptionBuilder.withArgName("center/width");
    OptionBuilder.hasArgs(2);
    OptionBuilder.withValueSeparator('/');
    OptionBuilder
            .withDescription("Specifies center and width of the " + "VOI window to be applied to the image.");
    opts.addOption(OptionBuilder.create("window"));

    OptionBuilder.withArgName("num");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "Quality of the image to be returned " + "within the range 1 to 100, 100 being the best quality.");
    opts.addOption(OptionBuilder.create("quality"));

    OptionBuilder.withArgName("path");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Directory to store retrieved objects, " + "working directory by default");
    opts.addOption(OptionBuilder.create("dir"));

    OptionBuilder.withArgName("dirpath");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Directory to store retrieved objects, " + "working directory by default");
    opts.addOption(OptionBuilder.create("dir"));

    OptionBuilder.withArgName("file");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Store retrieved object to specified file, "
            + "use SOP Instance UID + format specific file extension as " + "file name by default.");
    opts.addOption(OptionBuilder.create("o"));

    opts.addOption("nostore", false, "Do not store retrieved objects to files.");
    opts.addOption("nokeepalive", false, "Close TCP connection after each response.");
    opts.addOption("noredirect", false, "Disable HTTP redirects.");

    OptionBuilder.withArgName("kB");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription(
            "Size of byte buffer in KB " + "used for copying the retrieved object to disk, 8 KB by default.");
    opts.addOption(OptionBuilder.create("buffersize"));

    opts.addOption("h", "help", false, "print this message");
    opts.addOption("V", "version", false, "print the version information and exit");
    CommandLine cl = null;
    try {
        cl = new GnuParser().parse(opts, args);
    } catch (MissingOptionException e) {
        exit("dcmwado: Missing required option " + e.getMessage());
        throw new RuntimeException("unreachable");
    } catch (ParseException e) {
        exit("dcmwado: " + e.getMessage());
        throw new RuntimeException("unreachable");
    }
    if (cl.hasOption('V')) {
        Package p = DcmWado.class.getPackage();
        System.out.println("dcmwado v" + p.getImplementationVersion());
        System.exit(0);
    }
    if (cl.hasOption('h') || cl.getArgList().isEmpty()) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(USAGE, DESCRIPTION, opts, EXAMPLE);
        System.exit(0);
    }
    int narg = cl.getArgList().size();
    if (narg == 0)
        exit("Missing url of WADO server");
    if (narg == 1) {
        if (!cl.hasOption("uid")) {
            exit("You must either option -uid <uids> or <file>|<directory> specify");
        }
    } else {
        if (cl.hasOption("uid")) {
            exit("You may not specify option -uid <uids> together with " + "<file>|<directory>.");
        }
    }
    return cl;
}

From source file:org.dcm4che2.tool.pdf2dcm.Pdf2Dcm.java

private static CommandLine parse(String[] args) {
    Options opts = new Options();

    OptionBuilder.withArgName("charset");
    OptionBuilder.hasArg();/* ww  w  .ja v a  2s  .  c  o m*/
    OptionBuilder.withDescription("Specific Character Set, ISO_IR 100 by default");
    opts.addOption(OptionBuilder.create("cs"));

    OptionBuilder.withArgName("size");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Buffer size used for copying PDF to DICOM file, 8192 by default");
    opts.addOption(OptionBuilder.create("bs"));

    OptionBuilder.withArgName("file");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Configuration file specifying DICOM attribute values");
    opts.addOption(OptionBuilder.create("c"));

    opts.addOption("ivrle", false, "use Implicit VR Little Endian instead "
            + "Explicit VR Little Endian Transfer Syntax for DICOM encoding.");
    opts.addOption("h", "help", false, "print this message");

    OptionBuilder.withArgName("prefix");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Generate UIDs with given prefix," + "1.2.40.0.13.1.<host-ip> by default.");
    opts.addOption(OptionBuilder.create("uid"));

    opts.addOption("V", "version", false, "print the version information and exit");
    CommandLine cl = null;
    try {
        cl = new GnuParser().parse(opts, args);
    } catch (ParseException e) {
        exit("pdf2dcm: " + e.getMessage());
        throw new RuntimeException("unreachable");
    }
    if (cl.hasOption('V')) {
        Package p = Pdf2Dcm.class.getPackage();
        System.out.println("pdf2dcm v" + p.getImplementationVersion());
        System.exit(0);
    }
    if (cl.hasOption('h') || cl.getArgList().size() != 2) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(USAGE, DESCRIPTION, opts, EXAMPLE);
        System.exit(0);
    }

    return cl;
}

From source file:org.dcm4che2.tool.txt2dcmsr.Txt2DcmSR.java

private static CommandLine parse(String[] args) {
    Options opts = new Options();

    OptionBuilder.withArgName("charset");
    OptionBuilder.hasArg();/*from  w  ww .j ava 2  s . co m*/
    OptionBuilder.withDescription("Specific Character Set, ISO_IR 100 by default");
    opts.addOption(OptionBuilder.create("cs"));

    OptionBuilder.withArgName("file");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Configuration file specifying DICOM attribute values");
    opts.addOption(OptionBuilder.create("c"));

    OptionBuilder.withArgName("prefix");
    OptionBuilder.hasArg();
    OptionBuilder.withDescription("Generate UIDs with given prefix," + "1.2.40.0.13.1.<host-ip> by default.");
    opts.addOption(OptionBuilder.create("uid"));

    opts.addOption("para", false, "Separate text in paragraphs according line delimiters");

    opts.addOption("ivrle", false, "use Implicit VR Little Endian instead "
            + "Explicit VR Little Endian Transfer Syntax for DICOM encoding.");
    opts.addOption("h", "help", false, "print this message");

    opts.addOption("V", "version", false, "print the version information and exit");
    CommandLine cl = null;
    try {
        cl = new GnuParser().parse(opts, args);
    } catch (ParseException e) {
        exit("txt2dcmsr: " + e.getMessage());
        throw new RuntimeException("unreachable");
    }
    if (cl.hasOption('V')) {
        Package p = Txt2DcmSR.class.getPackage();
        System.out.println("txt2dcmsr v" + p.getImplementationVersion());
        System.exit(0);
    }
    if (cl.hasOption('h') || cl.getArgList().size() != 2) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(USAGE, DESCRIPTION, opts, EXAMPLE);
        System.exit(0);
    }

    return cl;
}

From source file:org.dspace.app.checker.ChecksumChecker.java

/**
 * Command line access to the checksum package.
 * /*from   w ww  . j a  va2  s .  c  o m*/
 * @param args
 *            <dl>
 *            <dt>-h</dt>
 *            <dd>Print help on command line options</dd>
 *            <dt>-l</dt>
 *            <dd>loop through bitstreams once</dd>
 *            <dt>-L</dt>
 *            <dd>loop continuously through bitstreams</dd>
 *            <dt>-d</dt>
 *            <dd>specify duration of process run</dd>
 *            <dt>-b</dt>
 *            <dd>specify bitstream IDs</dd>
 *            <dt>-a [handle_id]</dt>
 *            <dd>check anything by handle</dd>
 *            <dt>-e</dt>
 *            <dd>Report only errors in the logs</dd>
 *            <dt>-p</dt>
 *            <dd>Don't prune results before running checker</dd>
 *            </dl>
 */
public static void main(String[] args) {
    // set up command line parser
    CommandLineParser parser = new PosixParser();
    CommandLine line = null;

    // create an options object and populate it
    Options options = new Options();

    options.addOption("l", "looping", false, "Loop once through bitstreams");
    options.addOption("L", "continuous", false, "Loop continuously through bitstreams");
    options.addOption("h", "help", false, "Help");
    options.addOption("d", "duration", true, "Checking duration");
    options.addOption("c", "count", true, "Check count");
    options.addOption("a", "handle", true, "Specify a handle to check");
    options.addOption("v", "verbose", false, "Report all processing");

    OptionBuilder.withArgName("bitstream-ids").hasArgs()
            .withDescription("Space separated list of bitstream ids");
    Option useBitstreamIds = OptionBuilder.create('b');

    options.addOption(useBitstreamIds);

    options.addOption("p", "prune", false, "Prune configuration file");
    options.addOption(OptionBuilder.withArgName("prune").hasOptionalArgs(1)
            .withDescription("Prune old results (optionally using specified properties file for configuration)")
            .create('p'));

    try {
        line = parser.parse(options, args);
    } catch (ParseException e) {
        LOG.fatal(e);
        System.exit(1);
    }

    // user asks for help
    if (line.hasOption('h')) {
        printHelp(options);
    }

    // Prune stage
    if (line.hasOption('p')) {
        ResultsPruner rp = null;
        try {
            rp = (line.getOptionValue('p') != null) ? ResultsPruner.getPruner(line.getOptionValue('p'))
                    : ResultsPruner.getDefaultPruner();
        } catch (FileNotFoundException e) {
            LOG.error("File not found", e);
            System.exit(1);
        }
        int count = rp.prune();
        System.out.println("Pruned " + count + " old results from the database.");
    }

    Date processStart = Calendar.getInstance().getTime();

    BitstreamDispatcher dispatcher = null;

    // process should loop infinitely through
    // most_recent_checksum table
    if (line.hasOption('l')) {
        dispatcher = new SimpleDispatcher(new BitstreamInfoDAO(), processStart, false);
    } else if (line.hasOption('L')) {
        dispatcher = new SimpleDispatcher(new BitstreamInfoDAO(), processStart, true);
    } else if (line.hasOption('b')) {
        // check only specified bitstream(s)
        String[] ids = line.getOptionValues('b');
        List<Integer> idList = new ArrayList<Integer>(ids.length);

        for (int i = 0; i < ids.length; i++) {
            try {
                idList.add(Integer.valueOf(ids[i]));
            } catch (NumberFormatException nfe) {
                System.err.println("The following argument: " + ids[i] + " is not an integer");
                System.exit(0);
            }
        }
        dispatcher = new ListDispatcher(idList);
    }

    else if (line.hasOption('a')) {
        dispatcher = new HandleDispatcher(new BitstreamInfoDAO(), line.getOptionValue('a'));
    } else if (line.hasOption('d')) {
        // run checker process for specified duration
        try {
            dispatcher = new LimitedDurationDispatcher(
                    new SimpleDispatcher(new BitstreamInfoDAO(), processStart, true),
                    new Date(System.currentTimeMillis() + Utils.parseDuration(line.getOptionValue('d'))));
        } catch (Exception e) {
            LOG.fatal("Couldn't parse " + line.getOptionValue('d') + " as a duration: ", e);
            System.exit(0);
        }
    } else if (line.hasOption('c')) {
        int count = Integer.valueOf(line.getOptionValue('c')).intValue();

        // run checker process for specified number of bitstreams
        dispatcher = new LimitedCountDispatcher(
                new SimpleDispatcher(new BitstreamInfoDAO(), processStart, false), count);
    } else {
        dispatcher = new LimitedCountDispatcher(
                new SimpleDispatcher(new BitstreamInfoDAO(), processStart, false), 1);
    }

    ResultsLogger logger = new ResultsLogger(processStart);
    CheckerCommand checker = new CheckerCommand();
    // verbose reporting
    if (line.hasOption('v')) {
        checker.setReportVerbose(true);
    }

    checker.setProcessStartDate(processStart);
    checker.setDispatcher(dispatcher);
    checker.setCollector(logger);
    checker.process();
    System.exit(0);
}