Example usage for org.apache.commons.collections15 Closure Closure

List of usage examples for org.apache.commons.collections15 Closure Closure

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In this page you can find the example usage for org.apache.commons.collections15 Closure Closure.

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Closure

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Usage

From source file:com.diversityarrays.kdxplore.trials.TrialExplorerPanel.java

/**
 * Called because the user changed the client's URL by logging in to a
 * different database.//  w w  w .j  av  a 2 s  .com
 * 
 * @param why
 * @param client
 * @param onLoadComplete
 */
private void loadDatabaseDataFromKddart(final String prefix, UrlChangeConfirmation confirmation,
        final DALClient client, final Closure<DALClient> onLoadComplete) {
    String why = prefix + confirmation.reason;

    String dbfilename = KdxploreDatabase.LOCAL_DATABASE_URL;
    switch (confirmation) {
    case NEW_DATABASE:
        dbfilename = KdxploreDatabase.LOCAL_DATABASE_URL;
        break;
    case CHANGE_APPROVED:
    case NO_CHANGE_SAME_URL:
        dbfilename = DatabaseDataUtils.normaliseUrlForFilename(client.getBaseUrl());
        break;
    case CHANGE_DENIED:
        throw new IllegalStateException("loadDatabaseDataFromKddart with " + confirmation);
    }

    final File dbdataDirectory = new File(userDataFolder, dbfilename);

    Closure<Throwable> onFailure = new Closure<Throwable>() {
        @Override
        public void execute(Throwable t) {
            messagePrinter.println("Problem loading database from: " + dbdataDirectory.getPath());
            messagePrinter.println(t.getMessage());

            MsgBox.error(TrialExplorerPanel.this, t, why);
            onLoadComplete.execute(null);
        }
    };

    Closure<DALClient> onSuccess = new Closure<DALClient>() {
        @Override
        public void execute(DALClient dalClient) {
            onLoadComplete.execute(dalClient);
        }
    };

    offlineData.loadDatabaseDataFromKddart("Loading Reference Data from KDDart", driverType, dbdataDirectory,
            client, messageLogger, backgroundRunner, onFailure, onSuccess);
}

From source file:com.diversityarrays.kdxplore.trials.TrialExplorerPanel.java

private void collectTrialInfoAfterClientCheck(final String doWhat, Trial trial,
        final Closure<TrialLoadResult> onFinish) {
    DALClient client = null;//from w w w  .  j  a  v a  2s .com
    clientUrlChanger.setIgnoreClientUrlChanged(true);

    client = clientProvider.getDALClient(doWhat);
    if (client == null) {
        clientUrlChanger.setIgnoreClientUrlChanged(false);
        return; // user cancelled
    }

    final UrlChangeConfirmation confirm = confirmChangedClientIsOk(client, doWhat, WILL_CANCEL_PENDING);

    switch (confirm) {
    case CHANGE_DENIED:
        // User said "no"
        clientUrlChanger.setIgnoreClientUrlChanged(false);
        return;

    case CHANGE_APPROVED:
    case NEW_DATABASE:
        // Database changed - so we can't collect the TrialInfo because
        // the trial is from a different database !
        Closure<DALClient> onLoadComplete = new Closure<DALClient>() {
            @Override
            public void execute(DALClient dalClient) {
                clientUrlChanger.setIgnoreClientUrlChanged(false);
                clientUrlChanger.clientUrlChanged();

                // Note: use of WILL_CANCEL_PENDING parameter above
                // has already informed use of the Trial load cancel.
                // MsgBox.info(
                // TrialExplorerPanel.this,
                // "Database was changed so Trial Information retrieval was
                // cancelled",
                // REFRESH_TRIAL_INFO);
            }
        };

        loadDatabaseDataFromKddart(doWhat, confirm, client, onLoadComplete);
        break;

    case NO_CHANGE_SAME_URL:
        // Database not changed.
        clientUrlChanger.setIgnoreClientUrlChanged(false);
        try {
            collectTrialInfo(client, trial, onFinish);
        } catch (KdxploreConfigException | IOException e) {
            MsgBox.error(TrialExplorerPanel.this, e, REFRESH_TRIAL_INFO);
        }
        break;

    default:
        throw new RuntimeException("Unhandled value " + confirm);
    }
}

From source file:com.diversityarrays.kdxplore.trials.TrialExplorerPanel.java

private void collectTrialInfo(final DALClient client, final Trial trial,
        final Closure<TrialLoadResult> onFinish) throws KdxploreConfigException, IOException {

    Closure<Throwable> errorConsumer = new Closure<Throwable>() {
        @Override/*from   ww  w. j  a va  2 s. co m*/
        public void execute(Throwable cause) {

            String errmsg = cause.getMessage();

            Object optionMessage;

            if (cause instanceof DalException) {
                Either<String, DalException> check = TrialLoadResult
                        .checkPermissionDenied((DalException) cause);
                if (check.isRight()) {
                    DalException dalException = check.right();
                    if (dalException instanceof DalResponseHttpException) {
                        DalResponseHttpException he = (DalResponseHttpException) dalException;

                        for (DalHeader h : he.responseInfo.headers) {
                            if ("content-type".equalsIgnoreCase(h.getName())) {
                                String contentType = h.getValue();
                                if (contentType.startsWith("text/html")) {
                                    String html = he.responseInfo.serverResponse;
                                    if (html != null && !html.isEmpty()) {
                                        String plainText = net.pearcan.util.Util.htmlToPlainText(html);
                                        if (plainText != null) {
                                            errmsg = plainText;
                                        }

                                        if (!html.startsWith("<HTML>") && !html.startsWith("<html>")) {
                                            html = "<HTML>" + html;
                                        }
                                        optionMessage = new JLabel(html);
                                    }
                                }
                                break;
                            }
                        }
                    }
                } else {
                    optionMessage = check.left();
                }
            } else {
                StringWriter sw = new StringWriter();
                PrintWriter pw = new PrintWriter(sw);
                cause.printStackTrace(pw);
                pw.close();
                optionMessage = sw.toString();
            }

            trialOverviewPanel.setPayloadErrorMessage(trial, errmsg);
            messagePrinter.println(errmsg);

            MsgBox.error(TrialExplorerPanel.this, cause,
                    "Unable to get data for '" + trial.getTrialName() + "'");
        }
    };

    boolean wantSpecimens = getSpecimensRequired();

    Date today = new Date();
    offlineData.collectTrialInfo(client, backgroundRunner, dartSchemaHelper, wantSpecimens, errorConsumer,
            messageLogger, trial, today, onFinish);
}

From source file:org.drugis.addis.gui.WelcomeDialog.java

private void initComps() {

    final ButtonGroup examples = new ButtonGroup();
    examples.add(new JRadioButton(Main.Examples.DEPRESSION.name, true));
    examples.add(new JRadioButton(Main.Examples.HYPERTENSION.name));

    final AbstractAction exampleAction = new AbstractAction() {
        public void actionPerformed(ActionEvent arg0) {
            d_main.loadExampleDomain(Main.Examples.findFileName(getSelection(examples).getText()));
            closeWelcome();/*from   ww  w  .ja  va  2  s. c  om*/
        }
    };

    final AbstractAction loadAction = new AbstractAction() {
        public void actionPerformed(ActionEvent arg0) {
            if (d_main.fileLoadActions() == JFileChooser.APPROVE_OPTION) {
                closeWelcome();
            }
        }
    };

    final AbstractAction newAction = new AbstractAction() {
        public void actionPerformed(ActionEvent arg0) {
            d_main.newFileActions();
            closeWelcome();
        }
    };

    FormLayout layout = new FormLayout("left:pref, " + SPACING + "px, left:pref",
            "p, 3dlu, p, " + SPACING + "px, p, " + SPACING + "px, p, 3dlu, p");
    PanelBuilder builder = new PanelBuilder(layout);
    final CellConstraints cc = new CellConstraints();

    builder.add(createImageLabel(FileNames.IMAGE_HEADER), cc.xyw(1, 1, 3));
    builder.add(createButton("Load example", FileNames.ICON_TIP, exampleAction), cc.xy(1, 3));

    final PanelBuilder radios = new PanelBuilder(new FormLayout("p, fill:pref:grow, right:pref", "p, 3dlu, p"));

    final ArrayList<AbstractButton> buttons = Collections.list(examples.getElements());
    forAllDo(buttons, new Closure<AbstractButton>() {
        public void execute(final AbstractButton exampleOption) {
            int row = buttons.indexOf(exampleOption) == 0 ? 1 : buttons.indexOf(exampleOption) + 2;
            exampleOption.setOpaque(false);
            radios.add(exampleOption, cc.xy(1, row));
            radios.add(createHelpButton(exampleOption), cc.xy(3, row));
        }

        private JButton createHelpButton(final AbstractButton exampleOption) {
            JButton help = GUIFactory.createIconButton(org.drugis.mtc.gui.FileNames.ICON_ABOUT,
                    "Information about this example");
            removeBackground(help);

            help.addActionListener(new ActionListener() {
                public void actionPerformed(ActionEvent e) {
                    Examples example = Examples.findByName(exampleOption.getText());
                    String helpText = s_help.getHelpText(example.name().toLowerCase());
                    showExampleInfo(helpText);
                }
            });
            return help;
        }
    });

    JPanel radiosPanel = radios.getPanel();
    setBorder(radiosPanel);
    builder.add(radiosPanel, cc.xy(3, 3));

    builder.add(createButton("Open file", FileNames.ICON_OPENFILE, loadAction), cc.xy(1, 5));
    JTextPane load = createLabel("Load an existing ADDIS data file stored on your computer.");
    builder.add(load, cc.xy(3, 5));

    builder.add(createButton("New dataset", FileNames.ICON_FILE_NEW, newAction), cc.xy(1, 7));
    builder.add(createLabel("Start with an empty file to build up your own data and analyses."), cc.xy(3, 7));

    builder.add(createImageLabel(FileNames.IMAGE_FOOTER), cc.xyw(1, 9, 3));

    setContentPane(builder.getPanel());
}

From source file:org.springframework.jdbc.repo.impl.RawPropertiesIdentifiedEntityRepoImpl.java

@Override
public String createEntity(E entity) {
    Assert.notNull(entity, "No entity instance");

    final String prevId = entity.getId();
    final String assignedId = idGenerator.build();
    if (!StringUtils.isEmpty(prevId)) {
        logger.warn("createEntity(" + prevId + ") overwrite entity ID: " + assignedId);
    }//from  w ww.  ja  va2 s .c  o m
    entity.setId(assignedId);

    Map<String, ?> props = repo.setProperties(entity, entity2propsTransfomer);
    logger.info("createEntity(" + getEntityClass() + ")[" + prevId + "] created");
    if (logger.isTraceEnabled()) {
        ExtendedMapUtils.forAllEntriesDo(props, new Closure<Map.Entry<String, ?>>() {
            @Override
            @SuppressWarnings("synthetic-access")
            public void execute(Entry<String, ?> e) {
                logger.trace("createEntity(" + assignedId + ") " + e.getKey() + ": " + e.getValue());
            }
        });
    }

    return assignedId;
}

From source file:org.springframework.jdbc.repo.impl.RawPropertiesIdentifiedEntityRepoImpl.java

@Override
public void updateEntity(final E entity) {
    Assert.notNull(entity, "No entity provided");
    if (!entityExists(entity)) {
        throw new UnsupportedOperationException("updateEntity(" + entity + ") entity not persisted");
    }/*from   www.  ja v a2s .co m*/

    if (logger.isTraceEnabled()) {
        Map<String, ?> props = repo.getProperties(entity);
        ExtendedMapUtils.forAllEntriesDo(props, new Closure<Map.Entry<String, ?>>() {
            @Override
            @SuppressWarnings("synthetic-access")
            public void execute(Entry<String, ?> e) {
                logger.trace(
                        "updateEntity(" + entity.getId() + ")[" + e.getKey() + "]-BEFORE: " + e.getValue());
            }
        });
    }

    Map<String, ?> props = repo.setProperties(entity, entity2propsTransfomer);
    if (logger.isTraceEnabled()) {
        ExtendedMapUtils.forAllEntriesDo(props, new Closure<Map.Entry<String, ?>>() {
            @Override
            @SuppressWarnings("synthetic-access")
            public void execute(Entry<String, ?> e) {
                logger.trace("updateEntity(" + entity.getId() + ")[" + e.getKey() + "]-AFTER: " + e.getValue());
            }
        });
    }
}

From source file:org.springframework.jdbc.repo.impl.RawPropertiesPolymorphicIdentifiedEntityRepoImpl.java

@Override
public String createEntity(E entity) {
    Assert.notNull(entity, "No entity");

    final IdentifiedEntityIdGenerator<?> entityIdGenerator = getEntityIdGenerator(entity);
    if (entityIdGenerator == null) {
        throw new IllegalStateException(
                "createEntity(" + entity.getClass().getSimpleName() + ") no identity generator");
    }//from w ww . j  av a2s . c  o m

    final String prevId = entity.getId();
    final String assignedId = entityIdGenerator.build();
    if (!StringUtils.isEmpty(prevId)) {
        logger.warn("createEntity(" + prevId + ") overwrite entity ID: " + assignedId);
    }
    entity.setId(assignedId);

    Transformer<E, ? extends Map<String, ?>> transformer = getEntityTransformer(entity);
    if (transformer == null) {
        throw new IllegalStateException("createEntity(" + entity + ") no properties transformer");
    }

    Map<String, ?> props = repo.setProperties(entity, transformer);
    if (logger.isTraceEnabled()) {
        ExtendedMapUtils.forAllEntriesDo(props, new Closure<Map.Entry<String, ?>>() {
            @Override
            @SuppressWarnings("synthetic-access")
            public void execute(Entry<String, ?> e) {
                logger.trace("createEntity(" + assignedId + ") " + e.getKey() + ": " + e.getValue());
            }
        });
    }

    return assignedId;
}

From source file:org.springframework.jdbc.repo.impl.RawPropertiesPolymorphicIdentifiedEntityRepoImpl.java

@Override
public void updateEntity(final E entity) {
    Assert.notNull(entity, "No entity");
    if (!entityExists(entity)) {
        throw new UnsupportedOperationException("updateEntity(" + entity + ") entity not persisted");
    }/* w  w  w.  ja v  a 2s.  c om*/

    if (logger.isTraceEnabled()) {
        Map<String, ?> props = repo.getProperties(entity);
        ExtendedMapUtils.forAllEntriesDo(props, new Closure<Map.Entry<String, ?>>() {
            @Override
            @SuppressWarnings("synthetic-access")
            public void execute(Entry<String, ?> e) {
                logger.trace(
                        "updateEntity(" + entity.getId() + ")[" + e.getKey() + "]-BEFORE: " + e.getValue());
            }
        });
    }

    Transformer<E, ? extends Map<String, ?>> transformer = getEntityTransformer(entity);
    if (transformer == null) {
        throw new IllegalStateException("updateEntity(" + entity + ") no properties transformer");
    }

    Map<String, ?> props = repo.setProperties(entity, transformer);
    if (logger.isTraceEnabled()) {
        ExtendedMapUtils.forAllEntriesDo(props, new Closure<Map.Entry<String, ?>>() {
            @Override
            @SuppressWarnings("synthetic-access")
            public void execute(Entry<String, ?> e) {
                logger.trace("updateEntity(" + entity.getId() + ")[" + e.getKey() + "]-AFTER: " + e.getValue());
            }
        });
    }
}