Example usage for org.apache.commons.collections4 MapUtils getString

Introduction

In this page you can find the example usage for org.apache.commons.collections4 MapUtils getString.

Prototype

public static <K> String getString(final Map<? super K, ?> map, final K key)

Source Link

Document

Gets a String from a Map in a null-safe manner.

Usage

From source file:org.rippleosi.patient.medication.search.EtherCISMedicationSummaryTransformer.java

@Override
public MedicationSummary transform(Map<String, Object> input) {

    MedicationSummary medication = new MedicationSummary();
    medication.setSource("EtherCIS");
    medication.setSourceId(MapUtils.getString(input, "uid"));
    medication.setName(MapUtils.getString(input, "name"));
    medication.setDoseAmount(MapUtils.getString(input, "dose_amount"));

    return medication;
}

From source file:org.rippleosi.patient.medication.search.MedicationDetailsTransformer.java

@Override
public MedicationDetails transform(Map<String, Object> input) {

    String startDateTimeAsString = MapUtils.getString(input, "start_date");
    String dateCreatedAsString = MapUtils.getString(input, "date_created");

    Date startDate = DateFormatter.toDateOnly(startDateTimeAsString);
    Date startTime = DateFormatter.toTimeOnly(startDateTimeAsString);
    Date dateCreated = DateFormatter.toDate(dateCreatedAsString);

    MedicationDetails medication = new MedicationDetails();
    medication.setSource("Marand");
    medication.setSourceId(MapUtils.getString(input, "uid"));
    medication.setName(MapUtils.getString(input, "name"));
    medication.setDoseAmount(MapUtils.getString(input, "dose_amount"));
    medication.setDoseTiming(MapUtils.getString(input, "dose_timing"));
    medication.setDoseDirections(MapUtils.getString(input, "dose_directions"));
    medication.setRoute(MapUtils.getString(input, "route"));
    medication.setMedicationCode(MapUtils.getString(input, "medication_code"));
    medication.setMedicationTerminology(MapUtils.getString(input, "medication_terminology"));
    medication.setStartDate(startDate);//from   w w w. j  a  va2  s  .  com
    medication.setStartTime(startTime);
    medication.setAuthor(MapUtils.getString(input, "author"));
    medication.setDateCreated(dateCreated);

    return medication;
}

From source file:org.rippleosi.patient.medication.search.MedicationHeadlineTransformer.java

@Override
public MedicationHeadline transform(Map<String, Object> input) {

    MedicationHeadline medication = new MedicationHeadline();
    medication.setSource("Marand");
    medication.setSourceId(MapUtils.getString(input, "uid"));
    medication.setName(MapUtils.getString(input, "name"));

    return medication;
}

From source file:org.rippleosi.patient.medication.search.MedicationSummaryTransformer.java

@Override
public MedicationSummary transform(Map<String, Object> input) {

    MedicationSummary medication = new MedicationSummary();
    medication.setSource("Marand");
    medication.setSourceId(MapUtils.getString(input, "uid"));
    medication.setName(MapUtils.getString(input, "name"));
    medication.setDoseAmount(MapUtils.getString(input, "dose_amount"));

    return medication;
}

From source file:org.rippleosi.patient.problems.search.EtherCISProblemDetailsTransformer.java

@Override
public ProblemDetails transform(Map<String, Object> input) {

    ProblemDetails problem = new ProblemDetails();
    problem.setSource("EtherCIS");
    problem.setSourceId(MapUtils.getString(input, "uid"));
    problem.setProblem(MapUtils.getString(input, "problem"));
    problem.setCode(MapUtils.getString(input, "problem_code"));
    problem.setTerminology(MapUtils.getString(input, "problem_terminology"));
    problem.setDescription(MapUtils.getString(input, "description"));
    problem.setAuthor(MapUtils.getString(input, "author"));

    String onsetDate = MapUtils.getString(input, "onset_date");
    problem.setDateOfOnset(DateFormatter.toDate(onsetDate));

    String dateCreated = MapUtils.getString(input, "date_created");
    problem.setDateCreated(DateFormatter.toDate(dateCreated));

    return problem;
}

From source file:org.rippleosi.patient.problems.search.EtherCISProblemHeadlineTransformer.java

@Override
public ProblemHeadline transform(Map<String, Object> input) {

    ProblemHeadline problem = new ProblemHeadline();
    problem.setSource("EtherCIS");
    problem.setSourceId(MapUtils.getString(input, "uid"));
    problem.setProblem(MapUtils.getString(input, "problem"));

    return problem;
}

From source file:org.rippleosi.patient.problems.search.EtherCISProblemSummaryTransformer.java

@Override
public ProblemSummary transform(Map<String, Object> input) {

    ProblemSummary problem = new ProblemSummary();
    problem.setSource("EtherCIS");
    problem.setSourceId(MapUtils.getString(input, "uid"));
    problem.setProblem(MapUtils.getString(input, "problem"));

    String onsetDate = MapUtils.getString(input, "onset_date");
    problem.setDateOfOnset(DateFormatter.toDate(onsetDate));

    return problem;
}

From source file:org.rippleosi.patient.problems.search.FhirConditionTransformer.java

@Override
public Condition transform(Map<String, Object> input) {
    // retrieve variables
    String uid = MapUtils.getString(input, "uid");
    String problemText = MapUtils.getString(input, "problem");
    String dateOfOnsetString = MapUtils.getString(input, "date_of_onset");
    String status = MapUtils.getString(input, "diagnostic_certainty");
    String terminology = MapUtils.getString(input, "terminology");
    String terminologyCode = MapUtils.getString(input, "terminology_code");
    String comment = MapUtils.getString(input, "comment");
    String author = MapUtils.getString(input, "author");
    String authorId = MapUtils.getString(input, "author_id");
    String dateCreatedString = MapUtils.getString(input, "date_created");

    // set up a Condition object
    Condition condition = new Condition();
    condition.setId(uid);//  w w w .  ja  va2s.c o  m

    // populate the contained object with a Practitioner and Encounter resource
    List<Resource> contained = condition.getContained();
    contained.add(populatePractitionerResource(authorId, author));

    // add the Identifier resource
    List<Identifier> identifier = condition.getIdentifier();
    identifier.add(populateIdentifierResource(ehrId));

    // set Patient reference
    Reference patientReference = new Reference();
    patientReference.setReference("Patient/" + ehrId);
    patientReference.setId(ehrId);
    condition.setPatient(patientReference);

    // set Asserter reference
    Reference asserterReference = new Reference();
    asserterReference.setReference("Practitioner/" + authorId);
    asserterReference.setId(authorId);
    condition.setAsserter(asserterReference);

    // set code
    CodeableConcept code = populateCodeResource(problemText, terminology, terminologyCode);
    condition.setCode(code);

    // set verification status
    ConditionVerificationStatus verificationStatus = populateVerificationStatusResource(status);
    condition.setVerificationStatus(verificationStatus);

    // set date of onset
    Date dateOfOnset = DateFormatter.toDate(dateOfOnsetString);
    DateTimeType onset = new DateTimeType(dateOfOnset);
    condition.setOnset(onset);

    // set date recorded
    Date dateCreated = DateFormatter.toDate(dateCreatedString);
    condition.setDateRecorded(dateCreated);

    // set notes
    String notes = comment == null ? "" : comment;
    condition.setNotes(problemText + ". " + notes);

    // set Meta resource
    Meta meta = populateMetaResource(uid, dateCreatedString);
    condition.setMeta(meta);

    return condition;
}

From source file:org.rippleosi.patient.problems.search.ProblemDetailsTransformer.java

@Override
public ProblemDetails transform(Map<String, Object> input) {
    SimpleDateFormat sdf = new SimpleDateFormat("yyyy-MM-dd");
    Date dateOfOnset = null;//from   ww  w.  jav  a  2 s  .c  o m
    try {
        dateOfOnset = sdf.parse(MapUtils.getString(input, "onsetDate"));
    } catch (ParseException pe) {
    }

    ProblemDetails problem = new ProblemDetails();
    problem.setSource("Marand");
    problem.setSourceId(MapUtils.getString(input, "compositionID"));
    problem.setProblem(MapUtils.getString(input, "problem"));
    problem.setDateOfOnset(dateOfOnset);
    problem.setCode(MapUtils.getString(input, "problemCode"));
    problem.setTerminology(MapUtils.getString(input, "problemTerminology"));
    problem.setDescription(MapUtils.getString(input, "description"));
    problem.setAuthor(MapUtils.getString(input, "author"));

    String dateCreated = MapUtils.getString(input, "dateCreated");
    problem.setDateCreated(DateFormatter.toDate(dateCreated));

    return problem;
}

From source file:org.rippleosi.patient.problems.search.ProblemHeadlineTransformer.java

@Override
public ProblemHeadline transform(Map<String, Object> input) {

    ProblemHeadline problem = new ProblemHeadline();
    problem.setSource("Marand");
    problem.setSourceId(MapUtils.getString(input, "compositionID"));
    problem.setProblem(MapUtils.getString(input, "problem"));

    return problem;
}