Example usage for org.apache.commons.exec DefaultExecutor DefaultExecutor

List of usage examples for org.apache.commons.exec DefaultExecutor DefaultExecutor

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Introduction

In this page you can find the example usage for org.apache.commons.exec DefaultExecutor DefaultExecutor.

Prototype

public DefaultExecutor()

Source Link

Document

Default constructor creating a default PumpStreamHandler and sets the working directory of the subprocess to the current working directory.

Usage

From source file:org.apache.zeppelin.python.IPythonInterpreter.java

private void launchIPythonKernel(int ipythonPort) throws IOException {
    LOGGER.info("Launching IPython Kernel at port: " + ipythonPort);
    // copy the python scripts to a temp directory, then launch ipython kernel in that folder
    File pythonWorkDir = Files.createTempDirectory("zeppelin_ipython").toFile();
    String[] ipythonScripts = { "ipython_server.py", "ipython_pb2.py", "ipython_pb2_grpc.py" };
    for (String ipythonScript : ipythonScripts) {
        URL url = getClass().getClassLoader().getResource("grpc/python" + "/" + ipythonScript);
        FileUtils.copyURLToFile(url, new File(pythonWorkDir, ipythonScript));
    }//from w  ww  .  j  av  a 2s  .  c om

    CommandLine cmd = CommandLine.parse(pythonExecutable);
    cmd.addArgument(pythonWorkDir.getAbsolutePath() + "/ipython_server.py");
    cmd.addArgument(ipythonPort + "");
    DefaultExecutor executor = new DefaultExecutor();
    ProcessLogOutputStream processOutput = new ProcessLogOutputStream(LOGGER);
    executor.setStreamHandler(new PumpStreamHandler(processOutput));
    watchDog = new ExecuteWatchdog(ExecuteWatchdog.INFINITE_TIMEOUT);
    executor.setWatchdog(watchDog);

    if (useBuiltinPy4j) {
        //TODO(zjffdu) don't do hard code on py4j here
        File py4jDestFile = new File(pythonWorkDir, "py4j-src-0.10.7.zip");
        FileUtils.copyURLToFile(getClass().getClassLoader().getResource("python/py4j-src-0.10.7.zip"),
                py4jDestFile);
        if (additionalPythonPath != null) {
            // put the py4j at the end, because additionalPythonPath may already contain py4j.
            // e.g. PySparkInterpreter
            additionalPythonPath = additionalPythonPath + ":" + py4jDestFile.getAbsolutePath();
        } else {
            additionalPythonPath = py4jDestFile.getAbsolutePath();
        }
    }

    Map<String, String> envs = setupIPythonEnv();
    executor.execute(cmd, envs, this);

    // wait until IPython kernel is started or timeout
    long startTime = System.currentTimeMillis();
    while (true) {
        try {
            Thread.sleep(100);
        } catch (InterruptedException e) {
            LOGGER.error("Interrupted by something", e);
        }

        try {
            StatusResponse response = ipythonClient.status(StatusRequest.newBuilder().build());
            if (response.getStatus() == IPythonStatus.RUNNING) {
                LOGGER.info("IPython Kernel is Running");
                break;
            } else {
                LOGGER.info("Wait for IPython Kernel to be started");
            }
        } catch (Exception e) {
            // ignore the exception, because is may happen when grpc server has not started yet.
            LOGGER.info("Wait for IPython Kernel to be started");
        }

        if ((System.currentTimeMillis() - startTime) > ipythonLaunchTimeout) {
            throw new IOException(
                    "Fail to launch IPython Kernel in " + ipythonLaunchTimeout / 1000 + " seconds");
        }
    }
}

From source file:org.apache.zeppelin.python.PythonInterpreter.java

private void createGatewayServerAndStartScript() throws IOException {
    // start gateway server in JVM side
    int port = RemoteInterpreterUtils.findRandomAvailablePortOnAllLocalInterfaces();
    // use the FQDN as the server address instead of 127.0.0.1 so that python process in docker
    // container can also connect to this gateway server.
    String serverAddress = PythonUtils.getLocalIP(properties);
    String secret = PythonUtils.createSecret(256);
    this.gatewayServer = PythonUtils.createGatewayServer(this, serverAddress, port, secret, usePy4jAuth);
    gatewayServer.start();// w  w w. j  av  a  2 s  .co  m

    // launch python process to connect to the gateway server in JVM side
    createPythonScript();
    String pythonExec = getPythonExec();
    CommandLine cmd = CommandLine.parse(pythonExec);
    if (!pythonExec.endsWith(".py")) {
        // PythonDockerInterpreter set pythonExec with script
        cmd.addArgument(pythonWorkDir + "/zeppelin_python.py", false);
    }
    cmd.addArgument(serverAddress, false);
    cmd.addArgument(Integer.toString(port), false);

    executor = new DefaultExecutor();
    outputStream = new InterpreterOutputStream(LOGGER);
    PumpStreamHandler streamHandler = new PumpStreamHandler(outputStream);
    executor.setStreamHandler(streamHandler);
    executor.setWatchdog(new ExecuteWatchdog(ExecuteWatchdog.INFINITE_TIMEOUT));
    Map<String, String> env = setupPythonEnv();
    if (usePy4jAuth) {
        env.put("PY4J_GATEWAY_SECRET", secret);
    }
    LOGGER.info("Launching Python Process Command: " + cmd.getExecutable() + " "
            + StringUtils.join(cmd.getArguments(), " "));
    executor.execute(cmd, env, this);
    pythonScriptRunning.set(true);
}

From source file:org.apache.zeppelin.shell.security.ShellSecurityImpl.java

public static void createSecureConfiguration(Properties properties, String shell) {

    String authType = properties.getProperty("zeppelin.shell.auth.type").trim().toUpperCase();

    switch (authType) {
    case "KERBEROS":
        CommandLine cmdLine = CommandLine.parse(shell);
        cmdLine.addArgument("-c", false);
        String kinitCommand = String.format("kinit -k -t %s %s",
                properties.getProperty("zeppelin.shell.keytab.location"),
                properties.getProperty("zeppelin.shell.principal"));
        cmdLine.addArgument(kinitCommand, false);
        DefaultExecutor executor = new DefaultExecutor();

        try {/*from  w ww .  ja va2 s. co m*/
            int exitVal = executor.execute(cmdLine);
        } catch (Exception e) {
            LOGGER.error("Unable to run kinit for zeppelin user " + kinitCommand, e);
            throw new InterpreterException(e);
        }
    }
}

From source file:org.apache.zeppelin.shell.ShellInterpreter.java

@Override
public InterpreterResult interpret(String cmd, InterpreterContext contextInterpreter) {
    logger.debug("Run shell command '" + cmd + "'");
    long start = System.currentTimeMillis();
    CommandLine cmdLine = CommandLine.parse("bash");
    cmdLine.addArgument("-c", false);
    cmdLine.addArgument(cmd, false);//w w  w. ja v  a 2s  .com
    DefaultExecutor executor = new DefaultExecutor();
    ByteArrayOutputStream outputStream = new ByteArrayOutputStream();
    executor.setStreamHandler(new PumpStreamHandler(outputStream));

    executor.setWatchdog(new ExecuteWatchdog(commandTimeOut));
    try {
        int exitValue = executor.execute(cmdLine);
        return new InterpreterResult(InterpreterResult.Code.SUCCESS, outputStream.toString());
    } catch (ExecuteException e) {
        logger.error("Can not run " + cmd, e);
        return new InterpreterResult(Code.ERROR, e.getMessage());
    } catch (IOException e) {
        logger.error("Can not run " + cmd, e);
        return new InterpreterResult(Code.ERROR, e.getMessage());
    }
}

From source file:org.apache.zeppelin.spark.PySparkInterpreter.java

private void createGatewayServerAndStartScript() {
    // create python script
    createPythonScript();/*from  www .j a v  a  2 s  .c o  m*/

    port = findRandomOpenPortOnAllLocalInterfaces();

    gatewayServer = new GatewayServer(this, port);
    gatewayServer.start();

    // Run python shell
    CommandLine cmd = CommandLine.parse(getProperty("zeppelin.pyspark.python"));
    cmd.addArgument(scriptPath, false);
    cmd.addArgument(Integer.toString(port), false);
    cmd.addArgument(Integer.toString(getSparkInterpreter().getSparkVersion().toNumber()), false);
    executor = new DefaultExecutor();
    outputStream = new ByteArrayOutputStream();
    PipedOutputStream ps = new PipedOutputStream();
    in = null;
    try {
        in = new PipedInputStream(ps);
    } catch (IOException e1) {
        throw new InterpreterException(e1);
    }
    ins = new BufferedWriter(new OutputStreamWriter(ps));

    input = new ByteArrayOutputStream();

    PumpStreamHandler streamHandler = new PumpStreamHandler(outputStream, outputStream, in);
    executor.setStreamHandler(streamHandler);
    executor.setWatchdog(new ExecuteWatchdog(ExecuteWatchdog.INFINITE_TIMEOUT));

    try {
        Map env = EnvironmentUtils.getProcEnvironment();

        executor.execute(cmd, env, this);
        pythonscriptRunning = true;
    } catch (IOException e) {
        throw new InterpreterException(e);
    }

    try {
        input.write("import sys, getopt\n".getBytes());
        ins.flush();
    } catch (IOException e) {
        throw new InterpreterException(e);
    }
}

From source file:org.apache.zeppelin.spark.SparkRInterpreter.java

@Override
public void open() {
    // create R script
    createRScript();/* w  w w.  j av  a2  s . c  o  m*/

    int backendTimeout = Integer.parseInt(System.getenv().getOrDefault("SPARKR_BACKEND_TIMEOUT", "120"));

    // Launch a SparkR backend server for the R process to connect to; this will let it see our
    // Java system properties etc.
    ZeppelinRBackend sparkRBackend = new ZeppelinRBackend();

    Semaphore initialized = new Semaphore(0);
    Thread sparkRBackendThread = new Thread("SparkR backend") {
        @Override
        public void run() {
            sparkRBackendPort = sparkRBackend.init();
            initialized.release();
            sparkRBackend.run();
        }
    };

    sparkRBackendThread.start();

    // Wait for RBackend initialization to finish
    try {
        if (initialized.tryAcquire(backendTimeout, TimeUnit.SECONDS)) {
            // Launch R
            CommandLine cmd = CommandLine.parse(getProperty("zeppelin.sparkr.r"));
            cmd.addArgument(scriptPath, false);
            cmd.addArgument("--no-save", false);
            //      cmd.addArgument(getJavaSparkContext().version(), false);
            executor = new DefaultExecutor();
            outputStream = new ByteArrayOutputStream();
            PipedOutputStream ps = new PipedOutputStream();
            in = null;
            try {
                in = new PipedInputStream(ps);
            } catch (IOException e1) {
                throw new InterpreterException(e1);
            }
            ins = new BufferedWriter(new OutputStreamWriter(ps));

            input = new ByteArrayOutputStream();

            PumpStreamHandler streamHandler = new PumpStreamHandler(outputStream, outputStream, in);
            executor.setStreamHandler(streamHandler);
            executor.setWatchdog(new ExecuteWatchdog(ExecuteWatchdog.INFINITE_TIMEOUT));

            Map env = EnvironmentUtils.getProcEnvironment();

            String sparkRInterpreterObjId = sparkRBackend.put(this);
            String uberdataContextObjId = sparkRBackend.put(getUberdataContext());
            env.put("R_PROFILE_USER", scriptPath);
            env.put("SPARK_HOME", getSparkHome());
            env.put("EXISTING_SPARKR_BACKEND_PORT", String.valueOf(sparkRBackendPort));
            env.put("SPARKR_INTERPRETER_ID", sparkRInterpreterObjId);
            env.put("UBERDATA_CONTEXT_ID", uberdataContextObjId);
            logger.info("executing {} {}", env, cmd.toString());
            executor.execute(cmd, env, this);
            logger.info("executed");
            rScriptRunning = true;

        } else {
            System.err.println("SparkR backend did not initialize in " + backendTimeout + " seconds");
            System.exit(-1);
        }
    } catch (InterruptedException e) {
        new InterpreterException((e));
    } catch (IOException e) {
        new InterpreterException((e));
    }

}

From source file:org.apache.zeppelin.spark.ZeppelinR.java

/**
 * Start R repl/*from   w  ww.  ja v a2 s  . c o m*/
 * @throws IOException
 */
public void open() throws IOException {
    createRScript();

    zeppelinR.put(hashCode(), this);

    CommandLine cmd = CommandLine.parse(rCmdPath);
    cmd.addArgument("--no-save");
    cmd.addArgument("--no-restore");
    cmd.addArgument("-f");
    cmd.addArgument(scriptPath);
    cmd.addArgument("--args");
    cmd.addArgument(Integer.toString(hashCode()));
    cmd.addArgument(Integer.toString(port));
    cmd.addArgument(libPath);
    cmd.addArgument(Integer.toString(sparkVersion.toNumber()));

    // dump out the R command to facilitate manually running it, e.g. for fault diagnosis purposes
    logger.debug(cmd.toString());

    executor = new DefaultExecutor();
    outputStream = new InterpreterOutputStream(logger);

    input = new PipedOutputStream();
    PipedInputStream in = new PipedInputStream(input);

    PumpStreamHandler streamHandler = new PumpStreamHandler(outputStream, outputStream, in);
    executor.setWatchdog(new ExecuteWatchdog(ExecuteWatchdog.INFINITE_TIMEOUT));
    executor.setStreamHandler(streamHandler);
    Map env = EnvironmentUtils.getProcEnvironment();

    initialOutput = new InterpreterOutput(null);
    outputStream.setInterpreterOutput(initialOutput);
    executor.execute(cmd, env, this);
    rScriptRunning = true;

    // flush output
    eval("cat('')");
}

From source file:org.apache.zeppelin.submarine.job.thread.JobRunThread.java

public void run() {
    boolean tryLock = lockRunning.tryLock();
    if (false == tryLock) {
        LOGGER.warn("Can not get JobRunThread lockRunning!");
        return;//from  w  ww. j  a va  2  s.c om
    }

    SubmarineUI submarineUI = submarineJob.getSubmarineUI();
    try {
        InterpreterContext intpContext = submarineJob.getIntpContext();
        String noteId = intpContext.getNoteId();
        String userName = intpContext.getAuthenticationInfo().getUser();
        String jobName = SubmarineUtils.getJobName(userName, noteId);

        if (true == running.get()) {
            String message = String.format("Job %s already running.", jobName);
            submarineUI.outputLog("WARN", message);
            LOGGER.warn(message);
            return;
        }
        running.set(true);

        Properties properties = submarineJob.getProperties();
        HdfsClient hdfsClient = submarineJob.getHdfsClient();
        File pythonWorkDir = submarineJob.getPythonWorkDir();

        submarineJob.setCurrentJobState(EXECUTE_SUBMARINE);

        String algorithmPath = properties.getProperty(SubmarineConstants.SUBMARINE_ALGORITHM_HDFS_PATH, "");
        if (!algorithmPath.startsWith("hdfs://")) {
            String message = "Algorithm file upload HDFS path, " + "Must be `hdfs://` prefix. now setting "
                    + algorithmPath;
            submarineUI.outputLog("Configuration error", message);
            return;
        }

        List<ParagraphInfo> paragraphInfos = intpContext.getIntpEventClient().getParagraphList(userName,
                noteId);
        String outputMsg = hdfsClient.saveParagraphToFiles(noteId, paragraphInfos,
                pythonWorkDir == null ? "" : pythonWorkDir.getAbsolutePath(), properties);
        if (!StringUtils.isEmpty(outputMsg)) {
            submarineUI.outputLog("Save algorithm file", outputMsg);
        }

        HashMap jinjaParams = SubmarineUtils.propertiesToJinjaParams(properties, submarineJob, true);

        URL urlTemplate = Resources.getResource(SubmarineJob.SUBMARINE_JOBRUN_TF_JINJA);
        String template = Resources.toString(urlTemplate, Charsets.UTF_8);
        Jinjava jinjava = new Jinjava();
        String submarineCmd = jinjava.render(template, jinjaParams);
        // If the first line is a newline, delete the newline
        int firstLineIsNewline = submarineCmd.indexOf("\n");
        if (firstLineIsNewline == 0) {
            submarineCmd = submarineCmd.replaceFirst("\n", "");
        }

        StringBuffer sbLogs = new StringBuffer(submarineCmd);
        submarineUI.outputLog("Submarine submit command", sbLogs.toString());

        long timeout = Long
                .valueOf(properties.getProperty(SubmarineJob.TIMEOUT_PROPERTY, SubmarineJob.defaultTimeout));
        CommandLine cmdLine = CommandLine.parse(SubmarineJob.shell);
        cmdLine.addArgument(submarineCmd, false);
        DefaultExecutor executor = new DefaultExecutor();
        ExecuteWatchdog watchDog = new ExecuteWatchdog(timeout);
        executor.setWatchdog(watchDog);
        StringBuffer sbLogOutput = new StringBuffer();
        executor.setStreamHandler(new PumpStreamHandler(new LogOutputStream() {
            @Override
            protected void processLine(String line, int level) {
                line = line.trim();
                if (!StringUtils.isEmpty(line)) {
                    sbLogOutput.append(line + "\n");
                }
            }
        }));

        if (Boolean.valueOf(properties.getProperty(SubmarineJob.DIRECTORY_USER_HOME))) {
            executor.setWorkingDirectory(new File(System.getProperty("user.home")));
        }

        Map<String, String> env = new HashMap<>();
        String launchMode = (String) jinjaParams.get(SubmarineConstants.INTERPRETER_LAUNCH_MODE);
        if (StringUtils.equals(launchMode, "yarn")) {
            // Set environment variables in the submarine interpreter container run on yarn
            String javaHome, hadoopHome, hadoopConf;
            javaHome = (String) jinjaParams.get(SubmarineConstants.DOCKER_JAVA_HOME);
            hadoopHome = (String) jinjaParams.get(SubmarineConstants.DOCKER_HADOOP_HDFS_HOME);
            hadoopConf = (String) jinjaParams.get(SubmarineConstants.SUBMARINE_HADOOP_CONF_DIR);
            env.put("JAVA_HOME", javaHome);
            env.put("HADOOP_HOME", hadoopHome);
            env.put("HADOOP_HDFS_HOME", hadoopHome);
            env.put("HADOOP_CONF_DIR", hadoopConf);
            env.put("YARN_CONF_DIR", hadoopConf);
            env.put("CLASSPATH", "`$HADOOP_HDFS_HOME/bin/hadoop classpath --glob`");
            env.put("ZEPPELIN_FORCE_STOP", "true");
        }

        LOGGER.info("Execute EVN: {}, Command: {} ", env.toString(), submarineCmd);
        AtomicBoolean cmdLineRunning = new AtomicBoolean(true);
        executor.execute(cmdLine, env, new DefaultExecuteResultHandler() {
            @Override
            public void onProcessComplete(int exitValue) {
                String message = String.format("jobName %s ProcessComplete exit value is : %d", jobName,
                        exitValue);
                LOGGER.info(message);
                submarineUI.outputLog("JOR RUN COMPLETE", message);
                cmdLineRunning.set(false);
                submarineJob.setCurrentJobState(EXECUTE_SUBMARINE_FINISHED);
            }

            @Override
            public void onProcessFailed(ExecuteException e) {
                String message = String.format("jobName %s ProcessFailed exit value is : %d, exception is : %s",
                        jobName, e.getExitValue(), e.getMessage());
                LOGGER.error(message);
                submarineUI.outputLog("JOR RUN FAILED", message);
                cmdLineRunning.set(false);
                submarineJob.setCurrentJobState(EXECUTE_SUBMARINE_ERROR);
            }
        });
        int loopCount = 100;
        while ((loopCount-- > 0) && cmdLineRunning.get() && running.get()) {
            Thread.sleep(1000);
        }
        if (watchDog.isWatching()) {
            watchDog.destroyProcess();
            Thread.sleep(1000);
        }
        if (watchDog.isWatching()) {
            watchDog.killedProcess();
        }

        // Check if it has been submitted to YARN
        Map<String, Object> jobState = submarineJob.getJobStateByYarn(jobName);
        loopCount = 50;
        while ((loopCount-- > 0) && !jobState.containsKey("state") && running.get()) {
            Thread.sleep(3000);
            jobState = submarineJob.getJobStateByYarn(jobName);
        }

        if (!jobState.containsKey("state")) {
            String message = String.format("JOB %s was not submitted to YARN!", jobName);
            LOGGER.error(message);
            submarineUI.outputLog("JOR RUN FAILED", message);
            submarineJob.setCurrentJobState(EXECUTE_SUBMARINE_ERROR);
        }
    } catch (Exception e) {
        LOGGER.error(e.getMessage(), e);
        submarineJob.setCurrentJobState(EXECUTE_SUBMARINE_ERROR);
        submarineUI.outputLog("Exception", e.getMessage());
    } finally {
        running.set(false);
        lockRunning.unlock();
    }
}

From source file:org.apache.zeppelin.submarine.job.thread.TensorboardRunThread.java

public void run() {
    SubmarineUI submarineUI = submarineJob.getSubmarineUI();

    boolean tryLock = lockRunning.tryLock();

    try {/* ww w  . j ava  2 s  . c o  m*/
        Properties properties = submarineJob.getProperties();
        String tensorboardName = SubmarineUtils.getTensorboardName(submarineJob.getUserName());
        if (true == running.get()) {
            String message = String.format("tensorboard %s already running.", tensorboardName);
            submarineUI.outputLog("WARN", message);
            LOGGER.warn(message);
            return;
        }
        running.set(true);

        HashMap jinjaParams = SubmarineUtils.propertiesToJinjaParams(properties, submarineJob, false);
        // update jobName -> tensorboardName
        jinjaParams.put(SubmarineConstants.JOB_NAME, tensorboardName);

        URL urlTemplate = Resources.getResource(SubmarineJob.SUBMARINE_TENSORBOARD_JINJA);
        String template = Resources.toString(urlTemplate, Charsets.UTF_8);
        Jinjava jinjava = new Jinjava();
        String submarineCmd = jinjava.render(template, jinjaParams);
        // If the first line is a newline, delete the newline
        int firstLineIsNewline = submarineCmd.indexOf("\n");
        if (firstLineIsNewline == 0) {
            submarineCmd = submarineCmd.replaceFirst("\n", "");
        }
        StringBuffer sbLogs = new StringBuffer(submarineCmd);
        submarineUI.outputLog("Submarine submit command", sbLogs.toString());

        long timeout = Long
                .valueOf(properties.getProperty(SubmarineJob.TIMEOUT_PROPERTY, SubmarineJob.defaultTimeout));
        CommandLine cmdLine = CommandLine.parse(SubmarineJob.shell);
        cmdLine.addArgument(submarineCmd, false);
        DefaultExecutor executor = new DefaultExecutor();
        ExecuteWatchdog watchDog = new ExecuteWatchdog(timeout);
        executor.setWatchdog(watchDog);
        StringBuffer sbLogOutput = new StringBuffer();
        executor.setStreamHandler(new PumpStreamHandler(new LogOutputStream() {
            @Override
            protected void processLine(String line, int level) {
                line = line.trim();
                if (!StringUtils.isEmpty(line)) {
                    sbLogOutput.append(line + "\n");
                }
            }
        }));

        if (Boolean.valueOf(properties.getProperty(SubmarineJob.DIRECTORY_USER_HOME))) {
            executor.setWorkingDirectory(new File(System.getProperty("user.home")));
        }

        Map<String, String> env = new HashMap<>();
        String launchMode = (String) jinjaParams.get(SubmarineConstants.INTERPRETER_LAUNCH_MODE);
        if (StringUtils.equals(launchMode, "yarn")) {
            // Set environment variables in the container
            String javaHome, hadoopHome, hadoopConf;
            javaHome = (String) jinjaParams.get(SubmarineConstants.DOCKER_JAVA_HOME);
            hadoopHome = (String) jinjaParams.get(SubmarineConstants.DOCKER_HADOOP_HDFS_HOME);
            hadoopConf = (String) jinjaParams.get(SubmarineConstants.SUBMARINE_HADOOP_CONF_DIR);
            env.put("JAVA_HOME", javaHome);
            env.put("HADOOP_HOME", hadoopHome);
            env.put("HADOOP_HDFS_HOME", hadoopHome);
            env.put("HADOOP_CONF_DIR", hadoopConf);
            env.put("YARN_CONF_DIR", hadoopConf);
            env.put("CLASSPATH", "`$HADOOP_HDFS_HOME/bin/hadoop classpath --glob`");
        }

        LOGGER.info("Execute EVN: {}, Command: {} ", env.toString(), submarineCmd);

        AtomicBoolean cmdLineRunning = new AtomicBoolean(true);
        executor.execute(cmdLine, env, new DefaultExecuteResultHandler() {
            @Override
            public void onProcessComplete(int exitValue) {
                String message = String.format("jobName %s ProcessComplete exit value is : %d", tensorboardName,
                        exitValue);
                LOGGER.info(message);
                submarineUI.outputLog("TENSORBOARD RUN COMPLETE", message);
                cmdLineRunning.set(false);
            }

            @Override
            public void onProcessFailed(ExecuteException e) {
                String message = String.format("jobName %s ProcessFailed exit value is : %d, exception is : %s",
                        tensorboardName, e.getExitValue(), e.getMessage());
                LOGGER.error(message);
                submarineUI.outputLog("TENSORBOARD RUN FAILED", message);
                cmdLineRunning.set(false);
            }
        });
        int loopCount = 100;
        while ((loopCount-- > 0) && cmdLineRunning.get() && running.get()) {
            Thread.sleep(1000);
        }
        if (watchDog.isWatching()) {
            watchDog.destroyProcess();
            Thread.sleep(1000);
        }
        if (watchDog.isWatching()) {
            watchDog.killedProcess();
        }

        // Check if it has been submitted to YARN
        Map<String, Object> jobState = submarineJob.getJobStateByYarn(tensorboardName);
        loopCount = 50;
        while ((loopCount-- > 0) && !jobState.containsKey("state") && running.get()) {
            Thread.sleep(3000);
            jobState = submarineJob.getJobStateByYarn(tensorboardName);
        }

        if (!jobState.containsKey("state")) {
            String message = String.format("tensorboard %s was not submitted to YARN!", tensorboardName);
            LOGGER.error(message);
            submarineUI.outputLog("JOR RUN FAILED", message);
        }
    } catch (Exception e) {
        LOGGER.error(e.getMessage(), e);
        submarineUI.outputLog("Exception", e.getMessage());
    } finally {
        running.set(false);
        lockRunning.unlock();
    }
}

From source file:org.apache.zeppelin.submarine.SubmarineJobTest.java

@Test
public void defaultExecutorTest() throws IOException {
    DefaultExecutor executor = new DefaultExecutor();
    CommandLine cmdLine = CommandLine.parse(shell);

    URL urlTemplate = Resources.getResource(DEFAULT_EXECUTOR_TEST);

    cmdLine.addArgument(urlTemplate.getFile(), false);

    Map<String, String> env = new HashMap<>();
    env.put("CLASSPATH", "`$HADOOP_HDFS_HOME/bin/hadoop classpath --glob`");
    env.put("EVN", "test");

    AtomicBoolean cmdLineRunning = new AtomicBoolean(true);
    StringBuffer sbLogOutput = new StringBuffer();
    executor.setStreamHandler(new PumpStreamHandler(new LogOutputStream() {
        @Override/*from   w  w  w .ja va 2 s .c om*/
        protected void processLine(String line, int level) {
            //LOGGER.info(line);
            sbLogOutput.append(line + "\n");
        }
    }));

    executor.execute(cmdLine, env, new DefaultExecuteResultHandler() {
        @Override
        public void onProcessComplete(int exitValue) {
            cmdLineRunning.set(false);
        }

        @Override
        public void onProcessFailed(ExecuteException e) {
            cmdLineRunning.set(false);
            LOGGER.error(e.getMessage());
        }
    });
    int loopCount = 100;
    while ((loopCount-- > 0) && cmdLineRunning.get()) {
        try {
            Thread.sleep(1000);
        } catch (InterruptedException e) {
            e.printStackTrace();
        }
    }

    LOGGER.info(sbLogOutput.toString());
}