List of usage examples for org.apache.commons.exec ExecuteWatchdog ExecuteWatchdog
public ExecuteWatchdog(final long timeout)
From source file:beans.ExecutorFactoryImpl.java
@Override public ProcExecutor getDeployExecutor(ServerNode server) { logger.info("Creating deploy executor."); String key = getKey(server);/*from w w w . j a v a2s . c om*/ ProcessStreamHandler streamHandler = getProcessStreamHandler(key); ExecuteWatchdog watchdog = new ExecuteWatchdog( ApplicationContext.get().conf().cloudify.bootstrapCloudWatchDogProcessTimeoutMillis); ProcExecutor executor = (ProcExecutor) Spring.getBean("deployExecutor"); executor.setExitValue(1); executor.setWatchdog(watchdog); executor.setStreamHandler(streamHandler); executor.setId(key); return executor; }
From source file:com.sonar.scanner.api.it.tools.CommandExecutor.java
public int execute(String[] args, Map<String, String> env, @Nullable Path workingDir) throws IOException { if (!Files.isExecutable(file)) { Set<PosixFilePermission> perms = new HashSet<PosixFilePermission>(); perms.add(PosixFilePermission.OWNER_READ); perms.add(PosixFilePermission.OWNER_EXECUTE); Files.setPosixFilePermissions(file, perms); }//from www . ja v a 2s . com watchdog = new ExecuteWatchdog(TIMEOUT); CommandLine cmd = new CommandLine(file.toFile()); cmd.addArguments(args, false); DefaultExecutor exec = new DefaultExecutor(); exec.setWatchdog(watchdog); exec.setStreamHandler(createStreamHandler()); exec.setExitValues(null); if (workingDir != null) { exec.setWorkingDirectory(workingDir.toFile()); } in.close(); LOG.info("Executing: {}", cmd.toString()); return exec.execute(cmd, env); }
From source file:de.simu.decomap.messaging.resultprocessor.impl.helper.RulesExecutor.java
/** * Executing a predefined Rule/*from www . ja va2 s . co m*/ * @param ruleType RuleType * @param arg args for Rule * @return Success */ public boolean executePredefinedRule(byte ruleType, String arg) { logger.info("[IPTABLES] -> executing predefined command..."); // use apache's commons-exec for executing command! CommandLine cmdLine = new CommandLine(command); // get the predefined rule-parameters String[] ruleParams = Rules.getPredefindedRuleParameters(ruleType, arg); if (ruleParams != null) { // add rule-parameters to CommanLine-Object for (int i = 0; i < ruleParams.length; i++) { cmdLine.addArgument(ruleParams[i]); } // execute command DefaultExecuteResultHandler resultHandler = new DefaultExecuteResultHandler(); ExecuteWatchdog watchdog = new ExecuteWatchdog(mTimeout); Executor executor = new DefaultExecutor(); executor.setExitValue(1); executor.setWatchdog(watchdog); try { executor.execute(cmdLine, resultHandler); } catch (ExecuteException e) { logger.warn("[IPTABLES] -> error while executing predefined command: execute-exception occured!"); return false; } catch (IOException e) { logger.warn("[IPTABLES] -> error while executing predefined command: io-exception occured!"); return false; } try { // some time later the result handler callback was invoked so we // can safely request the exit value resultHandler.waitFor(); int exitCode = resultHandler.getExitValue(); logger.info("[IPTABLES] -> command " + ruleType + " executed, exit-code is: " + exitCode); switch (exitCode) { case EXIT_CODE_SUCCESS: return true; case EXIT_CODE_ERROR: return false; default: return false; } } catch (InterruptedException e) { logger.warn( "[IPTABLES] -> error while executing predefined command: interrupted-exception occured!"); return false; } } else { logger.warn("[IPTABLES] -> error while excuting predefined command: rule-parameters-list is null!"); return false; } }
From source file:its.tools.CommandExecutor.java
public void execute(String[] args, @Nullable Path workingDir) throws IOException { if (!Files.isExecutable(file)) { Set<PosixFilePermission> perms = new HashSet<PosixFilePermission>(); perms.add(PosixFilePermission.OWNER_READ); perms.add(PosixFilePermission.OWNER_EXECUTE); Files.setPosixFilePermissions(file, perms); }//from w w w . j a va 2 s . c o m watchdog = new ExecuteWatchdog(TIMEOUT); CommandLine cmd = new CommandLine(file.toFile()); cmd.addArguments(args); DefaultExecutor exec = new DefaultExecutor(); exec.setWatchdog(watchdog); exec.setStreamHandler(createStreamHandler()); exec.setExitValues(null); if (workingDir != null) { exec.setWorkingDirectory(workingDir.toFile()); } in.close(); LOG.info("Executing: {}", cmd.toString()); exec.execute(cmd, new ResultHander()); }
From source file:com.walmart.gatling.commons.ReportExecutor.java
private void runJob(Master.GenerateReport job) { TaskEvent taskEvent = job.reportJob.taskEvent; CommandLine cmdLine = new CommandLine(agentConfig.getJob().getCommand()); Map<String, Object> map = new HashMap<>(); map.put("path", new File(agentConfig.getJob().getJobArtifact(taskEvent.getJobName()))); cmdLine.addArgument("${path}"); //parameters come from the task event for (Pair<String, String> pair : taskEvent.getParameters()) { cmdLine.addArgument(pair.getValue()); }// ww w.j a v a 2 s. co m String dir = agentConfig.getJob().getLogDirectory() + "reports/" + job.reportJob.trackingId + "/"; cmdLine.addArgument(dir); cmdLine.setSubstitutionMap(map); DefaultExecutor executor = new DefaultExecutor(); executor.setExitValues(agentConfig.getJob().getExitValues()); ExecuteWatchdog watchdog = new ExecuteWatchdog(ExecuteWatchdog.INFINITE_TIMEOUT); executor.setWatchdog(watchdog); executor.setWorkingDirectory(new File(agentConfig.getJob().getPath())); FileOutputStream outFile = null; FileOutputStream errorFile = null; try { List<String> resultFiles = new ArrayList<>(job.results.size()); //download all files adn /*int i=0; for (Worker.Result result : job.results) { String destFile = dir + i++ + ".log"; resultFiles.add(destFile); DownloadFile.downloadFile(result.metrics,destFile); }*/ AtomicInteger index = new AtomicInteger(); job.results.parallelStream().forEach(result -> { String destFile = dir + index.incrementAndGet() + ".log"; resultFiles.add(destFile); DownloadFile.downloadFile(result.metrics, destFile); }); String outPath = agentConfig.getJob().getOutPath(taskEvent.getJobName(), job.reportJob.trackingId); String errPath = agentConfig.getJob().getErrorPath(taskEvent.getJobName(), job.reportJob.trackingId); //create the std and err files outFile = FileUtils.openOutputStream(new File(outPath)); errorFile = FileUtils.openOutputStream(new File(errPath)); PumpStreamHandler psh = new PumpStreamHandler(new ExecLogHandler(outFile), new ExecLogHandler(errorFile)); executor.setStreamHandler(psh); System.out.println(cmdLine); int exitResult = executor.execute(cmdLine); ReportResult result; if (executor.isFailure(exitResult)) { result = new ReportResult(dir, job.reportJob, false); log.info("Report Executor Failed, result: " + job.toString()); } else { result = new ReportResult(job.reportJob.getHtml(), job.reportJob, true); log.info("Report Executor Completed, result: " + result.toString()); } for (String resultFile : resultFiles) { FileUtils.deleteQuietly(new File(resultFile)); } getSender().tell(result, getSelf()); } catch (IOException e) { e.printStackTrace(); throw new RuntimeException(e); } finally { IOUtils.closeQuietly(outFile); IOUtils.closeQuietly(errorFile); } }
From source file:ch.ivyteam.ivy.maven.engine.EngineControl.java
public Executor start() throws Exception { CommandLine startCmd = toEngineCommand(Command.start); context.log.info("Start Axon.ivy Engine in folder: " + context.engineDirectory); Executor executor = createEngineExecutor(); executor.setStreamHandler(createEngineLogStreamForwarder(logLine -> findStartEngineUrl(logLine))); executor.setWatchdog(new ExecuteWatchdog(ExecuteWatchdog.INFINITE_TIMEOUT)); executor.setProcessDestroyer(new ShutdownHookProcessDestroyer()); executor.execute(startCmd, asynchExecutionHandler()); waitForEngineStart(executor);// w ww.ja va2s .co m return executor; }
From source file:io.vertx.config.vault.utils.VaultProcess.java
private void init() { String line = executable.getAbsolutePath() + " init -key-shares=1 -key-threshold=1 " + CA_CERT_ARG; System.out.println(">> " + line); CommandLine parse = CommandLine.parse(line); DefaultExecutor executor = new DefaultExecutor(); PumpStreamHandler pump = new PumpStreamHandler(new VaultOutputStream().addExtractor(l -> { if (l.contains("Unseal Key 1:")) { unseal = l.replace("Unseal Key 1: ", "").trim(); } else if (l.contains("Initial Root Token:")) { token = l.replace("Initial Root Token: ", "").trim(); }// w ww .j a v a 2 s .c o m }), System.err); ExecuteWatchdog watchDog = new ExecuteWatchdog(ExecuteWatchdog.INFINITE_TIMEOUT); executor.setWatchdog(watchDog); executor.setStreamHandler(pump); try { executor.execute(parse); } catch (IOException e) { throw new RuntimeException(e); } // await().until(() -> token != null); // await().until(() -> unseal != null); System.out.println("Vault Server initialized (but sealed)"); System.out.println("Root token: " + token); System.out.println("Unseal key: " + unseal); }
From source file:com.sonar.it.jenkins.orchestrator.container.JenkinsWrapper.java
@VisibleForTesting
ExecuteWatchdog createWatchDog() {
return new ExecuteWatchdog(60L * 60 * 1000);
}
From source file:edu.buffalo.fusim.ReadSimulator.java
public void run(String artBinPath, File fusionFile, String outputPrefix, int readLength, int meanFragSize, int readCoverage, boolean pairedEnd) { // Example art call: // art_illumina -i fusion.txt -o testsim -l 75 -f 10 -p -m 400 -s 10 CommandLine cmdLine = new CommandLine(artBinPath); // the filename of input DNA reference cmdLine.addArgument("-i"); cmdLine.addArgument("${file}"); // the prefix of output files cmdLine.addArgument("-o"); cmdLine.addArgument("${outputPrefix}"); // the length of reads to be simulated cmdLine.addArgument("-l"); cmdLine.addArgument("" + readLength); // the fold of read coverage to be simulated cmdLine.addArgument("-f"); cmdLine.addArgument("" + readCoverage); if (pairedEnd) { // indicate a paired-end read simulation cmdLine.addArgument("-p"); // the mean size of DNA fragments for paired-end simulations cmdLine.addArgument("-m"); cmdLine.addArgument("" + meanFragSize); // the standard deviation of DNA fragment size for paired-end simulations. cmdLine.addArgument("-s"); cmdLine.addArgument("10"); }/*from w ww . ja v a2s . co m*/ // quite - turn off end of run summary cmdLine.addArgument("-q"); Map map = new HashMap(); map.put("file", fusionFile); map.put("outputPrefix", outputPrefix); cmdLine.setSubstitutionMap(map); DefaultExecutor executor = new DefaultExecutor(); executor.setExitValue(0); // Timeout after 5 minutes ExecuteWatchdog watchdog = new ExecuteWatchdog(300000); executor.setWatchdog(watchdog); try { int exitValue = executor.execute(cmdLine); } catch (Exception e) { logger.fatal("Failed to execute ART for simulating Illumina reads: " + e.getMessage()); } }
From source file:edu.emory.cci.aiw.neo4jetl.Neo4jHome.java
private void controlServer(String command) throws IOException, InterruptedException, CommandFailedException { LOGGER.debug("Executing neo4j command {}...", command); CommandLine serverControlCommand = new CommandLine(new File(this.home, SERVER_CONTROL_COMMAND)); serverControlCommand.addArgument("${command}"); Map<String, String> map = new HashMap<>(); map.put("command", command); serverControlCommand.setSubstitutionMap(map); DefaultExecuteResultHandler resultHandler = new DefaultExecuteResultHandler(); ExecuteWatchdog watchdog = new ExecuteWatchdog(60 * 1000); Executor executor = new DefaultExecutor(); executor.setExitValue(1);//from w w w .ja v a 2 s . c om executor.setWatchdog(watchdog); executor.execute(serverControlCommand, resultHandler); LOGGER.debug("Neo4j command {} is completed, checking exit value...", command); resultHandler.waitFor(); int exitValue = resultHandler.getExitValue(); if (exitValue != 0) { ExecuteException exception = resultHandler.getException(); throw new CommandFailedException(exitValue, "Neo4j command '" + command + "' failed", exception); } LOGGER.debug("Neo4j command {} was successful", command); }