Example usage for org.apache.commons.io FilenameUtils getBaseName

Introduction

In this page you can find the example usage for org.apache.commons.io FilenameUtils getBaseName.

Prototype

public static String getBaseName(String filename) 

Source Link

Document

Gets the base name, minus the full path and extension, from a full filename.

Usage

From source file:MSUmpire.BaseDataStructure.InstrumentParameter.java

public void WriteParamSerialization(String mzXMLFileName) {
    try {//from  w ww. ja  v a 2 s  .c  o  m
        Logger.getRootLogger().info("Writing parameter to file:" + FilenameUtils.getFullPath(mzXMLFileName)
                + FilenameUtils.getBaseName(mzXMLFileName) + "_params.ser...");
        FileOutputStream fout = new FileOutputStream(FilenameUtils.getFullPath(mzXMLFileName)
                + FilenameUtils.getBaseName(mzXMLFileName) + "_params.ser", false);
        ObjectOutputStream oos = new ObjectOutputStream(fout);
        oos.writeObject(this);
        oos.close();
        fout.close();
    } catch (Exception ex) {
        Logger.getRootLogger().error(ExceptionUtils.getStackTrace(ex));
    }
}

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From source file:MSUmpire.DIA.RTMappingExtLib.java

private void GenerateRTMapPNG(XYSeriesCollection xySeriesCollection, XYSeries series, float R2)
        throws IOException {
    String pngfile = FilenameUtils.getFullPath(TargetLCMS.mzXMLFileName) + "/"
            + FilenameUtils.getBaseName(TargetLCMS.mzXMLFileName) + "_" + libManager.LibID + "_RTMap.png";
    FileWriter writer = new FileWriter(FilenameUtils.getFullPath(TargetLCMS.mzXMLFileName) + "/"
            + FilenameUtils.getBaseName(TargetLCMS.mzXMLFileName) + "_" + libManager.LibID + "_RTMap.txt");

    XYSeries smoothline = new XYSeries("RT fitting curve");
    for (XYZData data : regression.PredictYList) {
        smoothline.add(data.getX(), data.getY());
        writer.write(data.getX() + "\t" + data.getY() + "\n");
    }//  w  ww .java 2s. co m
    writer.close();
    xySeriesCollection.addSeries(smoothline);
    xySeriesCollection.addSeries(series);
    JFreeChart chart = ChartFactory.createScatterPlot("Retention time mapping: R2=" + R2,
            "Normalized RT (" + libManager.LibID + ")",
            "RT:" + FilenameUtils.getBaseName(TargetLCMS.mzXMLFileName), xySeriesCollection,
            PlotOrientation.VERTICAL, true, true, false);
    XYPlot xyPlot = (XYPlot) chart.getPlot();
    xyPlot.setDomainCrosshairVisible(true);
    xyPlot.setRangeCrosshairVisible(true);

    XYItemRenderer renderer = xyPlot.getRenderer();
    renderer.setSeriesPaint(1, Color.blue);
    renderer.setSeriesPaint(0, Color.BLACK);
    renderer.setSeriesShape(1, new Ellipse2D.Double(0, 0, 3, 3));
    renderer.setSeriesStroke(1, new BasicStroke(3.0f));
    renderer.setSeriesStroke(0, new BasicStroke(3.0f));
    xyPlot.setBackgroundPaint(Color.white);
    ChartUtilities.saveChartAsPNG(new File(pngfile), chart, 1000, 600);
}

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From source file:com.orange.wro.taglib.config.WroConfig.java

/**
 * TODO: we could use the property file generated by the "groupNameMappingFile"
 * maven configuration property./*from   ww w .j  ava 2  s. c  o m*/
 * However, it's difficult to make it work with WTP and m2e-wro4j eclipse plugin.
 */
private void loadMinimizedFiles() {

    @SuppressWarnings("unchecked")
    Set<String> resourcePaths = servletContext.getResourcePaths(options.getWroBaseUrl());
    if (resourcePaths == null) {
        return;
    }

    for (String path : resourcePaths) {
        String basename = FilenameUtils.getBaseName(path);
        // We don't add '-min' to our files, but I think thats what the substring was for.
        String groupName = basename.replace("-min", "");
        if (groups.containsKey(groupName)) {
            String type = FilenameUtils.getExtension(path);
            FilesGroup group = groups.get(groupName);
            group.putMinimizedFile(ResourceType.get(type), path);
        }
    }
}

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From source file:com.tocsi.images.ImageListBean.java

public void handleFileUpload(FileUploadEvent event) {
    if (event.getFile() != null) {
        try {//from  ww w  . j a v  a  2 s.  c  o m
            UploadedFile uf = (UploadedFile) event.getFile();
            File folder = new File(GlobalsBean.destOriginal);
            //File folderThumb = new File(destThumbnail);
            String filename = FilenameUtils.getBaseName(uf.getFileName());
            String extension = FilenameUtils.getExtension(uf.getFileName());
            File file = File.createTempFile(filename + "-", "." + extension, folder);
            //File fileThumb = File.createTempFile(filename + "-", "." + extension, folderThumb);

            //resize image here
            BufferedImage originalImage = ImageIO.read(uf.getInputstream());
            InputStream is = uf.getInputstream();
            if (originalImage.getWidth() > 700) { //resize image if image's width excess 700px
                BufferedImage origImage = Scalr.resize(originalImage, Scalr.Method.QUALITY,
                        Scalr.Mode.FIT_TO_WIDTH, 640,
                        (int) ((originalImage.getHeight() / ((double) (originalImage.getWidth() / 700.0)))),
                        Scalr.OP_ANTIALIAS);
                ByteArrayOutputStream os = new ByteArrayOutputStream();
                ImageIO.write(origImage, extension, os);
                is = new ByteArrayInputStream(os.toByteArray());
            }

            //create thumbnail
            BufferedImage thumbnail = Scalr.resize(ImageIO.read(uf.getInputstream()), 150);
            ByteArrayOutputStream osThumb = new ByteArrayOutputStream();
            ImageIO.write(thumbnail, extension, osThumb);
            InputStream isThumbnail = new ByteArrayInputStream(osThumb.toByteArray());

            try (InputStream input = is) {
                Files.copy(input, file.toPath(), StandardCopyOption.REPLACE_EXISTING);
            }

            try (InputStream input = isThumbnail) {
                Files.copy(input, Paths.get(GlobalsBean.destThumbnail + GlobalsBean.separator + file.getName()),
                        StandardCopyOption.REPLACE_EXISTING);
            }

            //File chartFile = new File(file.getAbsolutePath());
            //chart = new DefaultStreamedContent(new FileInputStream(chartFile), "image/jpg");
            ImageBean ib = new ImageBean();
            ib.setFilename(file.getName());
            ib.setThumbFile(file.getName());
            ib.setImageFileLocation(GlobalsBean.destOriginal + GlobalsBean.separator + file.getName());
            imageList.add(ib);
        } catch (IOException | IllegalArgumentException | ImagingOpException ex) {
            Utilities.displayError(ex.getMessage());
        }
    }
}

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From source file:com.hightern.fckeditor.tool.UtilsFile.java

/**
 * Iterates over a base name and returns the first non-existent file.<br />
 * This method extracts a file's base name, iterates over it until the first non-existent appearance with <code>basename(n).ext</code>. Where n is a positive integer starting from one.
 * //w  w w.j a v  a 2 s  .  co m
 * @param file
 *            base file
 * @return first non-existent file
 */
public static File getUniqueFile(final File file) {
    if (!file.exists()) {
        return file;
    }

    File tmpFile = new File(file.getAbsolutePath());
    final File parentDir = tmpFile.getParentFile();
    int count = 1;
    final String extension = FilenameUtils.getExtension(tmpFile.getName());
    final String baseName = FilenameUtils.getBaseName(tmpFile.getName());
    do {
        tmpFile = new File(parentDir, baseName + "(" + count++ + ")." + extension);
    } while (tmpFile.exists());
    return tmpFile;
}

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From source file:edu.si.services.beans.edansidora.IdsPushBean.java

public void createAndPush(Exchange exchange) throws EdanIdsException {

    try {/*  w w  w. ja v a 2  s .c o  m*/
        out = exchange.getIn();

        inputLocation = new File(out.getHeader("CamelFileAbsolutePath", String.class));
        // get a list of files from current directory
        if (inputLocation.isFile()) {
            inputLocation = inputLocation.getParentFile();
            LOG.debug("Input File Location: " + inputLocation);
        }

        deploymentId = out.getHeader("SiteId", String.class);

        String assetName = "ExportEmammal_emammal_image_" + deploymentId;
        String pushDirPath = pushLocation + "/" + assetName + "/";
        File assetXmlFile = new File(pushDirPath + assetName + ".xml");
        if (!assetXmlFile.getParentFile().exists()) {
            assetXmlFile.getParentFile().mkdirs();
        } else {
            LOG.warn("IDS files for deployment: {} already exists!!", deploymentId);
        }

        LOG.debug("IDS Write Asset Files to: {}", assetXmlFile);
        LOG.debug("IDS inputLocation = {}", inputLocation);
        LOG.debug("IDS deploymentId = {}", deploymentId);

        File files[] = inputLocation.listFiles();

        LOG.debug("Input file list: " + Arrays.toString(files));

        int completed = 0;

        StringBuilder assetXml = new StringBuilder();
        assetXml.append("<?xml version=\"1.0\" encoding=\"ISO-8859-1\"?>\r\n<Assets>");

        try (BufferedWriter writer = new BufferedWriter(new FileWriter(assetXmlFile))) {

            for (int i = 0; i < files.length; i++) {

                String fileName = files[i].getName();

                LOG.debug("Started file: {} has ext = {}", files[i], FilenameUtils.getExtension(fileName));

                // Do not include the manifest file
                if (!FilenameUtils.getExtension(fileName).contains("xml")
                        && !ignored.containsKey(FilenameUtils.getBaseName(fileName))) {

                    LOG.debug("Adding File {}", fileName);

                    File sourceImageFile = new File(files[i].getPath());
                    File destImageFile = new File(pushDirPath + "emammal_image_" + fileName);

                    LOG.debug("Copying image asset from {} to {}", sourceImageFile, destImageFile);
                    FileUtils.copyFile(sourceImageFile, destImageFile);

                    assetXml.append("\r\n  <Asset Name=\"");
                    assetXml.append(FilenameUtils.getName(destImageFile.getPath()));
                    assetXml.append(
                            "\" IsPublic=\"Yes\" IsInternal=\"No\" MaxSize=\"3000\" InternalMaxSize=\"4000\">");
                    assetXml.append(FilenameUtils.getBaseName(destImageFile.getPath()));
                    assetXml.append("</Asset>");
                } else {
                    LOG.debug("Deployment Manifest XML Found! Skipping {}", files[i]);
                }
            }
            assetXml.append("\r\n</Assets>");

            writer.write(assetXml.toString());

            LOG.info("Completed: {} of {}, Wrote Asset XML File to: {}", completed++, files.length,
                    assetXmlFile);
            out.setHeader("idsPushDir", assetXmlFile.getParent());
        } catch (Exception e) {
            throw new EdanIdsException("IdsPushBean error during createAndPush", e);
        }
    } catch (Exception e) {
        throw new EdanIdsException(e);
    }
}

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From source file:edu.jhuapl.openessence.config.AppInitializer.java

private List<PropertySource<?>> getPropertySources(Collection<Resource> resources) {
    List<PropertySource<?>> propertySources = new ArrayList<PropertySource<?>>();

    for (Resource r : resources) {
        String filename = r.getFilename();
        if (filename == null) {
            throw new IllegalArgumentException("Cannot have resource with no file");
        }/*from   w  w w  .j  a v  a 2 s . c om*/

        String name = FilenameUtils.getBaseName(r.getFilename());

        Properties source;
        try {
            source = PropertiesLoaderUtils.loadProperties(r);
        } catch (IOException e) {
            throw new IllegalStateException(e);
        }

        propertySources.add(new PropertiesPropertySource(name, source));

        try {
            log.info("Adding file {} as property source named '{}'", r.getFile(), name);
        } catch (IOException e) {
            throw new IllegalStateException(e);
        }
    }

    return propertySources;
}

---

From source file:de.uzk.hki.da.convert.TiffConversionStrategy.java

@Override
public List<Event> convertFile(WorkArea wa, ConversionInstruction ci) {

    List<Event> resultEvents = new ArrayList<Event>();

    String input = wa.toFile(ci.getSource_file()).getAbsolutePath();
    String[] commandAsArray;/*from   ww w  . j a  v a 2  s  . c  o  m*/
    String prunedError = "";
    FormatCmdLineExecutor cle = new FormatCmdLineExecutor(cliConnector, knownErrors);
    try {
        // Codec identification is done by subformatidentification
        ImageMagickSubformatIdentifier imsf = new ImageMagickSubformatIdentifier();
        imsf.setKnownFormatCommandLineErrors(knownErrors);
        imsf.setCliConnector(cliConnector);

        if (imsf.identify(new File(input), prune).indexOf("None") >= 0)
            return resultEvents;

        // create subfolder if necessary
        Path.make(wa.dataPath(), object.getNameOfLatestBRep(), ci.getTarget_folder()).toFile().mkdirs();

        commandAsArray = new String[] { "convert", "+compress", input, generateTargetFilePath(wa, ci) };

        logger.debug("Try to Execute conversion command: " + StringUtils.join(commandAsArray, ","));

        cle.setPruneExceptions(prune);
        try {
            cle.execute(commandAsArray);
        } catch (UserFileFormatException ufe) {
            if (!ufe.isWasPruned())
                throw ufe;
            prunedError = " " + ufe.getKnownError().getError_name() + " ISSUED WAS PRUNED BY USER!";
        }
    } catch (IOException e1) {
        throw new RuntimeException(e1);
    }

    File result = new File(generateTargetFilePath(wa, ci));

    String baseName = FilenameUtils.getBaseName(result.getAbsolutePath());
    String extension = FilenameUtils.getExtension(result.getAbsolutePath());
    logger.info("Finding files matching wildcard expression \"" + baseName + "*." + extension
            + "\" in order to check them and test if conversion was successful");
    List<File> results = findFilesWithWildcard(new File(FilenameUtils.getFullPath(result.getAbsolutePath())),
            baseName + "*." + extension);

    for (File f : results) {
        DAFile daf = new DAFile(object.getNameOfLatestBRep(),
                StringUtilities.slashize(ci.getTarget_folder()) + f.getName());
        logger.debug("new dafile:" + daf);

        Event e = new Event();
        e.setType("CONVERT");

        e.setDetail(StringUtilities.createString(commandAsArray) + prunedError);
        e.setSource_file(ci.getSource_file());
        e.setTarget_file(daf);
        e.setDate(new Date());

        resultEvents.add(e);
    }

    return resultEvents;
}

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From source file:com.doplgangr.secrecy.filesystem.encryption.AES_ECB_Crypter.java

@Override
public String getDecryptedFileName(File file) throws SecrecyCipherStreamException, FileNotFoundException {

    String name = FilenameUtils.getBaseName(file.getName());
    try {//from  w w w .  j  av a2s .  c o  m
        name = Base64Coder.decodeString(name); //if name is invalid, return original name
    } catch (IllegalArgumentException ignored) {
    }
    name += "." + FilenameUtils.getExtension(file.getName());
    return name;
}

---

From source file:net.mitnet.tools.pdf.book.publisher.ui.gui.BaseBookPublisherGUI.java

protected void publishBook() {

    File inputDir = getInputDir();
    File outputDir = getOutputDir();
    File outputBookDir = getOutputDir().getParentFile();
    String outputBookName = FilenameUtils.getBaseName(outputDir.getName()) + "-book"
            + FileExtensionConstants.PDF_EXTENSION;
    File outputBookFile = new File(outputBookDir, outputBookName);
    String metaTitle = null;//  ww  w .j  ava 2s.  c  o  m
    try {
        metaTitle = outputBookFile.getName();
        metaTitle = FilenameUtils.getBaseName(metaTitle);
    } catch (Exception e) {
        System.err.println("Error defining meta title");
    }
    String metaVersionId = "" + new Date().getTime();

    System.out.println("Input dir is " + inputDir);
    System.out.println("Output dir is " + outputDir);
    System.out.println("Output book file is " + outputBookFile);

    if (inputDir.isDirectory() && outputDir.isDirectory()) {
        try {
            setStatusMessage("Publishing book ...");
            System.out.println("Processing files in input dir " + inputDir + " ...");

            BookPublisherConfig config = buildBookPublisherConfig();
            config.setMetaTitle(metaTitle);
            config.setMetaVersionId(metaVersionId);
            BookPublisher bookPublisher = new BookPublisher();
            bookPublisher.setConfig(config);
            bookPublisher.publish(inputDir, outputDir, outputBookFile);
            // setStatusMessage("Finished publishing book.");
            String fileName = outputBookFile.getName();
            setStatusMessage("Finished publishing book " + fileName);

        } catch (Exception ex) {
            setStatusMessage("Error publishing book: " + ex.getMessage());
        }
    } else {
        setStatusMessage("Source or output folder is invalid.");
    }
}

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