Example usage for org.apache.commons.lang SerializationUtils serialize

Introduction

In this page you can find the example usage for org.apache.commons.lang SerializationUtils serialize.

Prototype

public static byte[] serialize(Serializable obj)

Source Link

Document

Serializes an Object to a byte array for storage/serialization.

Usage

From source file:uk.ac.diamond.scisoft.analysis.io.UViewDatLoaderTest.java

@Test
public void testSerializability() throws Exception {
    final String testfile = "testfiles/gda/analysis/io/UViewDatLoaderTest/movie_22_000001.dat";
    DataHolder loader = (DataHolder) new UViewDatLoader(testfile).loadFile();
    Dataset data = loader.getDataset(0);
    SerializationUtils.serialize(data.getMetadata());
}

From source file:uk.ac.ebi.interpro.scan.model.ProteinTest.java

/**
 * Tests the serialization and de-serialization works.
 *///  w  w w .  j av  a 2  s .  co  m
@Test
public void testSerialization() throws IOException {

    Protein original = new Protein(GOOD);
    original.addCrossReference(new ProteinXref("A0A000_9ACTO"));

    Set<Hmmer2Match.Hmmer2Location> locations = new HashSet<Hmmer2Match.Hmmer2Location>();
    locations.add(new Hmmer2Match.Hmmer2Location(3, 107, 3.0, 3.7e-9, 1, 104, HmmBounds.N_TERMINAL_COMPLETE));
    original.addMatch(new Hmmer2Match(new Signature("PF02310", "B12-binding"), 0.035, 3.7e-9, locations));

    Set<ProfileScanMatch.ProfileScanLocation> l = new HashSet<ProfileScanMatch.ProfileScanLocation>();
    // Sequence is 60 chars, so make up a CIGAR string that adds up to 60 (10+10+30):
    l.add(new ProfileScanMatch.ProfileScanLocation(1, 60, 15.158, "10M10D10I30M"));
    original.addMatch(new ProfileScanMatch(new Signature("PS50206"), l));

    byte[] data = SerializationUtils.serialize(original);
    String originalXML = marshal(original);
    Object retrieved = SerializationUtils.deserialize(data);
    String unserializedXML = marshal((Protein) retrieved);
    if (LOGGER.isDebugEnabled()) {
        LOGGER.debug(unserializedXML);
        LOGGER.debug("Data lengths serialized: " + data.length + " original xml: " + originalXML.length()
                + " unserialized xml: " + unserializedXML.length());
    }

    XMLUnit.setIgnoreComments(true);
    XMLUnit.setIgnoreWhitespace(true);
    XMLUnit.setIgnoreAttributeOrder(true);
    XMLUnit.setIgnoreDiffBetweenTextAndCDATA(true);
    XMLUnit.setNormalizeWhitespace(true);
    assertEquals(originalXML, unserializedXML);
}

From source file:uk.bl.wa.hadoop.indexer.WritableSolrRecord.java

@Override
public void write(DataOutput output) throws IOException {
    byte[] bytes = SerializationUtils.serialize(this.sr.getSolrDocument());
    output.writeInt(bytes.length);//from  w w w.j av a  2s .  c  o  m
    output.write(bytes);
}

From source file:ws.prager.camel.consul.ConsulRegistry.java

public void put(String key, Object object) {
    // Substitute $ character in key
    key = key.replaceAll("\\$", "/");
    // create session to avoid conflicts
    // (not sure if that is safe enough, again)
    SessionClient sessionClient = consul.sessionClient();
    String sessionName = "session_" + UUID.randomUUID().toString();
    SessionCreatedResponse response = sessionClient
            .createSession(ImmutableSession.builder().name(sessionName).build());
    String sessionId = response.getId();
    kvClient = consul.keyValueClient();// w  w w  .  ja  v a2  s .  c o m
    String lockKey = "lock_" + key;
    kvClient.acquireLock(lockKey, sessionName, sessionId);

    // Allow only unique keys, last one wins
    if (lookupByName(key) != null) {
        remove(key);
    }
    Object clone = SerializationUtils.clone((Serializable) object);
    byte[] serializedObject = SerializationUtils.serialize((Serializable) clone);
    // pre-encode due native encoding issues
    byte[] preEncodedValue = Base64.encodeBase64(serializedObject);
    String value = new String(preEncodedValue);
    // store the actual class
    logger.debug("store value: " + value + " ,under key: " + key);
    kvClient.putValue(key, value);
    // store just as a bookmark
    logger.debug("store bookmark: " + 1 + " ,under key: " + object.getClass().getName().replaceAll("\\$", "/")
            + "/" + key);
    kvClient.putValue(object.getClass().getName().replaceAll("\\$", "/") + "/" + key, "1");
    kvClient.releaseLock(lockKey, sessionId);
}