Example usage for org.apache.commons.lang StringUtils deleteWhitespace

Introduction

In this page you can find the example usage for org.apache.commons.lang StringUtils deleteWhitespace.

Prototype

public static String deleteWhitespace(String str) 

Source Link

Document

Deletes all whitespaces from a String as defined by Character#isWhitespace(char) .

Usage

From source file:org.openmrs.module.hl7query.HL7OBXORUR01TemplateTest.java

@Test
public void shouldEvaluateOBXORUR01TemplateForCodedConcept() throws Exception {
    //given//w ww .ja va  2s. co  m
    ConceptDatatype datatype = new ConceptDatatype();
    datatype.setUuid(ConceptDatatype.CODED_UUID);
    datatype.setHl7Abbreviation(ConceptDatatype.CODED);

    Concept concept = new Concept(1);
    concept.setDatatype(datatype);
    concept.addName(new ConceptName("CodedConcept", Locale.ENGLISH));

    ConceptSource source = new ConceptSource();
    source.setName("PIH");

    ConceptMap map = new ConceptMap();
    map.setSourceCode("100");
    map.setSource(source);

    Concept conceptValue = new Concept(2);
    conceptValue.addName(new ConceptName("AnswerConcept", Locale.ENGLISH));
    conceptValue.addConceptMapping(map);

    Date dateCreated = new Date();

    Obs obs = new Obs();
    obs.setConcept(concept);
    obs.setDateCreated(dateCreated);
    obs.setValueCoded(conceptValue);

    Map<String, Object> bindings = new HashMap<String, Object>();
    bindings.put("obsIndex", 0);
    bindings.put("obs", obs);
    bindings.put("implementationId", "MVP");

    //when
    HL7Template hl7Template = hl7QueryService.getHL7TemplateByName("Generic OBX");
    String evaluatedTemplate = hl7QueryService.evaluateTemplate(hl7Template, bindings);
    evaluatedTemplate = StringUtils.deleteWhitespace(evaluatedTemplate);

    //then
    Assert.assertEquals("<ORU_R01.OBSERVATION><OBX>" + "<OBX.1>0</OBX.1><OBX.2>CWE</OBX.2>"
            + "<OBX.3><CE.1>1</CE.1><CE.2>CodedConcept</CE.2><CE.3>MVP</CE.3></OBX.3>"
            + "<OBX.5><CE.1>100</CE.1><CE.2>AnswerConcept</CE.2><CE.3>PIH</CE.3></OBX.5>" + "<OBX.14><TS.1>"
            + StringUtils.deleteWhitespace(new HL7TemplateFunctions().formatDate(dateCreated, null))
            + "</TS.1></OBX.14>" + "</OBX></ORU_R01.OBSERVATION>", evaluatedTemplate);
}

---

From source file:org.openmrs.module.hl7query.HL7PatientORUR01TemplateTest.java

@Test
public void shouldEvaluatePatientORUR01Template() throws Exception {
    //given//  www. j  a v a2  s .c  o  m
    PatientIdentifierType patientIdentifierType = new PatientIdentifierType();
    patientIdentifierType.setName("IDENTIFIER TYPE");

    PatientIdentifier patientIdentifier = new PatientIdentifier();
    patientIdentifier.setIdentifier("PATIENT IDENTIFIER");
    patientIdentifier.setPreferred(true);
    patientIdentifier.setIdentifierType(patientIdentifierType);

    PatientIdentifier patientIdentifier2 = new PatientIdentifier();
    patientIdentifier2.setIdentifier("PATIENT IDENTIFIER2");
    patientIdentifier2.setPreferred(true);
    patientIdentifier2.setIdentifierType(patientIdentifierType);

    PersonName personName = new PersonName("PATIENT GIVENNAME", "PATIENT MIDDLENAME", "PATIENT FAMILYNAME");
    personName.setPreferred(true);

    PersonName personName2 = new PersonName("PATIENT GIVENNAME2", "PATIENT MIDDLENAME2", "PATIENT FAMILYNAME2");
    personName2.setPreferred(false);

    Patient patient = new Patient();
    patient.addIdentifier(patientIdentifier);
    patient.addIdentifier(patientIdentifier2);
    patient.addName(personName);
    patient.addName(personName2);

    String locationUUID = "3d8bb0d6-6b5b-4f6d-92a3-d9b8e4972d48";

    Location location = new Location();
    location.setUuid(locationUUID);
    location.setName("locationName");

    Date encounterDatetime = new Date(213231421890234L);

    Encounter encounter = new Encounter();
    encounter.setLocation(location);
    encounter.setEncounterType(new EncounterType("encounterTypeName", ""));
    encounter.setEncounterDatetime(encounterDatetime);
    encounter.setPatient(patient);

    Map<String, Object> bindings = new HashMap<String, Object>();
    bindings.put("encounter", encounter);

    //when
    HL7Template hl7Template = hl7QueryService.getHL7TemplateByName("Generic Patient");
    String evaluatedTemplate = hl7QueryService.evaluateTemplate(hl7Template, bindings);
    evaluatedTemplate = StringUtils.deleteWhitespace(evaluatedTemplate);

    //then
    Assert.assertEquals("<ORU_R01.PATIENT><PID><PID.1>1</PID.1><PID.3><CX.1>PATIENTIDENTIFIER</CX.1>"
            + "<CX.5>IDENTIFIERTYPE</CX.5></PID.3><PID.3><CX.1>PATIENTIDENTIFIER2</CX.1>"
            + "<CX.5>IDENTIFIERTYPE</CX.5></PID.3><PID.5><XPN.1><FN.1>PATIENTFAMILYNAME</FN.1></XPN.1>"
            + "<XPN.2>PATIENTGIVENNAME</XPN.2><XPN.3>PATIENTMIDDLENAME</XPN.3></PID.5></PID>"
            + "<ORU_R01.VISIT><PV1><PV1.2>0</PV1.2><PV1.3><PL.1>3d8bb0d6-6b5b-4f6d-92a3-d9b8e4972d48</PL.1>"
            + "<PL.4><HD.1>locationName</HD.1></PL.4></PV1.3><PV1.4>encounterTypeName</PV1.4><PV1.7>"
            + "<XCN.1>null</XCN.1><XCN.2><FN.1>null</FN.1></XCN.2><XCN.3>null</XCN.3><XCN.13>NID</XCN.13></PV1.7>"
            + "<PV1.44><TS.1>" + new HL7TemplateFunctions().formatDate(encounterDatetime, null)
            + "</TS.1></PV1.44></PV1></ORU_R01.VISIT></ORU_R01.PATIENT>", evaluatedTemplate);

    System.out.print(UUID.randomUUID().toString());
}

---

From source file:org.openmrs.module.hl7query.web.controller.HL7QueryControllerTest.java

/**
 * @see {@link HL7QueryController#getEncounters(String,String,String,Date,Date,HttpServletRequest)}
 *//* w  w w .  ja  v a 2s.  c o m*/
@Test
@Verifies(value = "should return the expected hl7 output as xml if the xml header exists", method = "getEncounters(String,String,String,Date,Date,HttpServletRequest)")
public void getEncounters_shouldReturnTheExpectedHl7OutputAsXmlIfTheXmlHeaderExists() throws Exception {
    //TODO Add the ORU_R01.ORDER_OBSERVATION tags(obs) to the test file 'expectedORUR01Output.xml'
    //When https://tickets.openmrs.org/browse/HLQRY-38 is completed
    String expectedOutput = IOUtils
            .toString(getClass().getClassLoader().getResourceAsStream("expectedORUR01XmlOutput.xml"));
    expectedOutput = StringUtils.deleteWhitespace(expectedOutput);

    MockHttpServletRequest request = new MockHttpServletRequest();
    MockHttpServletResponse response = new MockHttpServletResponse();
    request.addHeader("Accept", "text/xml");
    String hl7Output = new HL7QueryController()
            .getEncounters(null, null, ENCOUNTER_1_UUID, null, null, request, response).toString();
    hl7Output = StringUtils.deleteWhitespace(hl7Output);
    //Ignore timestamp by removing it
    hl7Output = StringUtils.replace(hl7Output, StringUtils.substringBetween(hl7Output, "<TS.1>", "</TS.1>"),
            "");
    //Ignore the uuid of the message
    hl7Output = StringUtils.replace(hl7Output, StringUtils.substringBetween(hl7Output, "<MSH.10>", "</MSH.10>"),
            "");

    Assert.assertEquals(expectedOutput, hl7Output);
}

---

From source file:org.openmrs.module.hl7query.web.controller.HL7QueryControllerTest.java

/**
 * @see {@link HL7QueryController#getEncounters(String,String,String,Date,Date,HttpServletRequest)}
 *//*ww w .j  a v  a  2s.co  m*/
@Test
@Verifies(value = "should return the expected hl7 in the format that matches the accept header value", method = "getEncounters(String,String,String,Date,Date,HttpServletRequest)")
public void getEncounters_shouldReturnTheExpectedHl7InTheFormatThatMatchesTheAcceptHeaderValue()
        throws Exception {
    MockHttpServletRequest request = new MockHttpServletRequest();
    MockHttpServletResponse response = new MockHttpServletResponse();
    String hl7Output = new HL7QueryController()
            .getEncounters(null, null, ENCOUNTER_1_UUID, null, null, request, response).toString();
    hl7Output = StringUtils.deleteWhitespace(hl7Output);

    //Test if constant values exist in pipe delimited format
    Assert.assertTrue(hl7Output.contains("||ORU^R01^ORU_R01|"));
    Assert.assertTrue(hl7Output.contains("|D^C|2.5^RWA|||||||||CLSM_V0.83PID|1PV1||0|"));

    Assert.assertFalse(hl7Output.contains("<ORU_R01 xmlns=\"urn:hl7-org:v2xml\">"));
    Assert.assertFalse(hl7Output.contains("</ORU_R01>"));
}

---

From source file:org.openmrs.module.hl7query.web.controller.HL7QueryControllerTest.java

/**
 * @see {@link HL7QueryController#getEncounters(String,String,String,Date,Date,HttpServletRequest)}
 *//*from w  w w . j  a va 2s  .c o m*/
@Test
@Verifies(value = "should return the patient encounters given the patient identifier and id type", method = "getEncounters(String,String,String,Date,Date,HttpServletRequest)")
public void getEncounters_shouldReturnThePatientEncountersGivenThePatientIdentifierAndIdType()
        throws Exception {
    //TODO Add the ORU_R01.ORDER_OBSERVATION tags(obs) to the test file 'expectedOutput_encountersByPatient.xml'
    //When https://tickets.openmrs.org/browse/HLQRY-38 is completed
    String expectedOutput = IOUtils.toString(
            getClass().getClassLoader().getResourceAsStream("expectedOutput_encountersByPatient.xml"));
    expectedOutput = StringUtils.deleteWhitespace(expectedOutput);

    final String identifier = "6TS-4";
    final String identifierTypeUuid = "1a339fe9-38bc-4ab3-b180-320988c0b968";
    final int expectedEncounterCount = 3;
    Patient patient = Context.getPatientService().getPatient(7);
    //sanity checks
    Assert.assertEquals(identifier, patient.getPatientIdentifier().getIdentifier());
    Assert.assertEquals(identifierTypeUuid, patient.getPatientIdentifier().getIdentifierType().getUuid());
    Assert.assertEquals(expectedEncounterCount,
            Context.getEncounterService().getEncountersByPatient(patient).size());

    MockHttpServletRequest request = new MockHttpServletRequest();
    MockHttpServletResponse response = new MockHttpServletResponse();
    request.addHeader("Accept", "text/xml");
    String hl7Output = new HL7QueryController()
            .getEncounters(identifier, identifierTypeUuid, null, null, null, request, response).toString();

    hl7Output = StringUtils.deleteWhitespace(hl7Output);
    //Ignore timestamp by removing it
    hl7Output = StringUtils.replace(hl7Output, StringUtils.substringBetween(hl7Output, "<TS.1>", "</TS.1>"),
            "");
    //Ignore the uuid of the message
    hl7Output = StringUtils.replace(hl7Output, StringUtils.substringBetween(hl7Output, "<MSH.10>", "</MSH.10>"),
            "");

    Assert.assertEquals(expectedOutput, hl7Output);
}

---

From source file:org.openmrs.module.hl7query.web.controller.HL7QueryControllerTest.java

/**
 * @see {@link HL7QueryController#getEncounters(String,String,String,Date,Date,HttpServletRequest)}
 *///from  w w  w. ja va  2s .c o  m
@Test
@Verifies(value = "should return the patient encounters matching specified start and end encounter dates", method = "getEncounters(String,String,String,Date,Date,HttpServletRequest)")
public void getEncounters_shouldReturnThePatientEncountersMatchingSpecifiedStartAndEndEncounterDates()
        throws Exception {
    //TODO Add the ORU_R01.ORDER_OBSERVATION tags(obs) to the test file 'expectedOutput_encountersByStartAndEndDate.xml'
    //When https://tickets.openmrs.org/browse/HLQRY-38 is completed
    String expectedOutput = IOUtils.toString(
            getClass().getClassLoader().getResourceAsStream("expectedOutput_encountersByStartAndEndDate.xml"));
    expectedOutput = StringUtils.deleteWhitespace(expectedOutput);

    final String identifier = "6TS-4";
    final String identifierTypeUuid = "1a339fe9-38bc-4ab3-b180-320988c0b968";
    Patient patient = Context.getPatientService().getPatient(7);
    //sanity checks
    Assert.assertEquals(identifier, patient.getPatientIdentifier().getIdentifier());
    Assert.assertEquals(identifierTypeUuid, patient.getPatientIdentifier().getIdentifierType().getUuid());

    MockHttpServletRequest request = new MockHttpServletRequest();
    MockHttpServletResponse response = new MockHttpServletResponse();
    request.addHeader("Accept", "text/xml");
    Encounter expectedEncounter = Context.getEncounterService().getEncounter(4);
    String hl7Output = new HL7QueryController()
            .getEncounters(identifier, identifierTypeUuid, null, expectedEncounter.getEncounterDatetime(),
                    expectedEncounter.getEncounterDatetime(), request, response)
            .toString();

    hl7Output = StringUtils.deleteWhitespace(hl7Output);
    //Ignore timestamp by removing it
    hl7Output = StringUtils.replace(hl7Output, StringUtils.substringBetween(hl7Output, "<TS.1>", "</TS.1>"),
            "");
    //Ignore the uuid of the message
    hl7Output = StringUtils.replace(hl7Output, StringUtils.substringBetween(hl7Output, "<MSH.10>", "</MSH.10>"),
            "");

    Assert.assertEquals(expectedOutput, hl7Output);
}

---

From source file:org.openmrs.module.hl7query.web.controller.HL7QueryControllerTest.java

@Test
@Verifies(value = "should return appopriately formed error message if patient id and encounter uuid are null", method = "getEncounters(String,String,String,Date,Date,HttpServletRequest)")
public void getEncounters_shouldReturnAppopriatelyFormedErrorMessageIfPatientIdAndEncounterUuidAreNull()
        throws Exception {

    //Test the xml formatted error message
    String expectedOutput = IOUtils
            .toString(getClass().getClassLoader().getResourceAsStream("missingIdentifiersXmlError.xml"));
    expectedOutput = StringUtils.deleteWhitespace(expectedOutput);

    MockHttpServletRequest request = new MockHttpServletRequest();
    MockHttpServletResponse response = new MockHttpServletResponse();
    request.addHeader("Accept", "text/xml");
    String hl7Output = new HL7QueryController().getEncounters(null, null, null, null, null, request, response)
            .toString();/*from   w w w .  j ava2s  . c  o  m*/
    hl7Output = StringUtils.deleteWhitespace(hl7Output);
    Assert.assertEquals(hl7Output, expectedOutput);

    //Test the json error message
    String expectedPipeOutput = IOUtils
            .toString(getClass().getClassLoader().getResourceAsStream("missingIdentifiersJsonError.json"));
    expectedPipeOutput = StringUtils.deleteWhitespace(expectedPipeOutput);

    MockHttpServletRequest pipeRequest = new MockHttpServletRequest();
    MockHttpServletResponse pipeResponse = new MockHttpServletResponse();

    String hl7PipeOutput = new HL7QueryController()
            .getEncounters(null, null, null, null, null, pipeRequest, pipeResponse).toString();
    hl7Output = StringUtils.deleteWhitespace(hl7PipeOutput);
    Assert.assertEquals(hl7PipeOutput, expectedPipeOutput);
}

---

From source file:org.openmrs.module.hl7query.web.controller.HL7QueryControllerTest.java

@Test
@Verifies(value = "should return appopriately formed error message if encounter uuid is not found", method = "getEncounters(String,String,String,Date,Date,HttpServletRequest)")
public void getEncounters_shouldReturnAppopriatelyFormedErrorMessageIfEncounterUuidIsNotFound()
        throws Exception {

    //Test the xml formatted error message
    String expectedOutput = IOUtils
            .toString(getClass().getClassLoader().getResourceAsStream("missingEncounterUuidXmlError.xml"));
    expectedOutput = StringUtils.deleteWhitespace(expectedOutput);

    MockHttpServletRequest request = new MockHttpServletRequest();
    MockHttpServletResponse response = new MockHttpServletResponse();
    request.addHeader("Accept", "text/xml");
    String hl7Output = new HL7QueryController().getEncounters(null, null, "0", null, null, request, response)
            .toString();//from  ww  w  .  j  a  v a2  s.c o  m
    hl7Output = StringUtils.deleteWhitespace(hl7Output);
    Assert.assertEquals(hl7Output, expectedOutput);

    //Test the json error message
    String expectedPipeOutput = IOUtils
            .toString(getClass().getClassLoader().getResourceAsStream("missingEncounterUuidJsonError.json"));

    MockHttpServletRequest pipeRequest = new MockHttpServletRequest();
    MockHttpServletResponse pipeResponse = new MockHttpServletResponse();

    String hl7PipeOutput = new HL7QueryController()
            .getEncounters(null, null, "0", null, null, pipeRequest, pipeResponse).toString();
    Assert.assertEquals(hl7PipeOutput, expectedPipeOutput);
}

---

From source file:org.openmrs.module.patientsummary.PatientSummaryTestUtil.java

/**
 * Utility method that tests that the results of evaluating a particular template,
 * for a particular report definition, produces a particular result
 *//*from www . j  ava2s  .  co m*/
public static void testGroovyTemplate(PatientSummaryReportDefinition rd, Integer patientId,
        String templatePrefix) throws Exception {

    PatientSummaryTemplate template = createGroovyTemplate("Test", rd,
            "templates/" + templatePrefix + "Template.txt");
    String expectedResults = PatientSummaryTestUtil
            .getResourceAsString("templates/" + templatePrefix + "Output.txt");

    PatientSummaryService pss = Context.getService(PatientSummaryService.class);
    PatientSummaryResult result = pss.evaluatePatientSummaryTemplate(template, patientId,
            new HashMap<String, Object>());

    Assert.assertNull(result.getErrorDetails());
    String actualResult = new String(result.getRawContents(), "UTF-8");
    Assert.assertEquals(StringUtils.deleteWhitespace(expectedResults),
            StringUtils.deleteWhitespace(actualResult));
}

---

From source file:org.openmrs.module.patientsummary.web.PatientSummaryWebConfiguration.java

public static void saveEnableTemplateOnPatientDashboard(PatientSummaryTemplate template,
        boolean enableOnPatientDashboard) {
    PatientSummaryService service = Context.getService(PatientSummaryService.class);
    String templateUuid = template.getUuid();
    GlobalProperty gp = Context.getAdministrationService()
            .getGlobalPropertyObject(GP_PATIENT_DASHBOARD_SUMMARIES);
    if (gp == null) {
        gp = new GlobalProperty(GP_PATIENT_DASHBOARD_SUMMARIES);
    }/*from  w w  w.j ava 2  s  . c  om*/
    String uuids = gp.getPropertyValue();
    if (uuids == null) {
        uuids = "";
    }

    uuids = StringUtils.deleteWhitespace(uuids);
    String[] uuidArray = uuids.split(",");
    List<String> uuidList = new ArrayList<String>();
    for (int index = 0; index < uuidArray.length; index++) {
        String uuid = uuidArray[index];
        if (StringUtils.isBlank(uuid)) {
            continue;
        }

        //Add only if uuid references an existing template.
        if (service.getPatientSummaryTemplateByUuid(uuid) != null) {
            uuidList.add(uuid);
        }
    }

    if (enableOnPatientDashboard) {
        //Add this template uuid if not already part of the global property value.
        if (!uuidList.contains(templateUuid)) {
            uuidList.add(templateUuid);
        }
    } else {
        //Remove this template uuid if already part of the global property value.
        if (uuidList.contains(templateUuid)) {
            uuidList.remove(templateUuid);
        }
    }

    uuids = StringUtils.join(uuidList, ",");
    gp.setPropertyValue(uuids);
    Context.getAdministrationService().saveGlobalProperty(gp);
}

---

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