Example usage for org.apache.commons.math3.stat.descriptive DescriptiveStatistics getMax

List of usage examples for org.apache.commons.math3.stat.descriptive DescriptiveStatistics getMax

Introduction

In this page you can find the example usage for org.apache.commons.math3.stat.descriptive DescriptiveStatistics getMax.

Prototype

public double getMax() 

Source Link

Document

Returns the maximum of the available values

Usage

From source file:com.github.jessemull.microflexbigdecimal.stat.MaxTest.java

/**
 * Tests the plate statistics method using the values between the indices.
 *//*from  ww w  .j a v a 2  s  . c  om*/
@Test
public void testPlateIndices() {

    for (Plate plate : arrayIndices) {

        int size = arrayIndices[0].first().size();
        int begin = random.nextInt(size - 5);
        int end = (begin + 4) + random.nextInt(size - (begin + 4) + 1);

        Map<Well, BigDecimal> resultMap = new TreeMap<Well, BigDecimal>();
        Map<Well, BigDecimal> returnedMap = max.plate(plate, begin, end - begin);

        for (Well well : plate) {

            double[] input = new double[well.size()];
            int index = 0;

            for (BigDecimal bd : well) {
                input[index++] = bd.doubleValue();
            }

            DescriptiveStatistics stat = new DescriptiveStatistics(ArrayUtils.subarray(input, begin, end));
            double resultDouble = stat.getMax();

            BigDecimal result = new BigDecimal(resultDouble);

            resultMap.put(well, result);
        }

        for (Well well : plate) {

            BigDecimal result = resultMap.get(well);
            BigDecimal returned = returnedMap.get(well);

            BigDecimal[] corrected = correctRoundingErrors(result, returned);

            assertEquals(corrected[0], corrected[1]);
        }
    }
}

From source file:com.github.jessemull.microflexbigdecimal.stat.MaxTest.java

/**
 * Tests set calculation using indices.//  w w w .j  a v a 2s .  co  m
 */
@Test
public void testSetIndices() {

    for (Plate plate : arrayIndices) {

        int size = arrayIndices[0].first().size();
        int begin = random.nextInt(size - 5);
        int end = (begin + 4) + random.nextInt(size - (begin + 4) + 1);

        Map<Well, BigDecimal> resultMap = new TreeMap<Well, BigDecimal>();
        Map<Well, BigDecimal> returnedMap = max.set(plate.dataSet(), begin, end - begin);

        for (Well well : plate) {

            double[] input = new double[well.size()];
            int index = 0;

            for (BigDecimal bd : well) {
                input[index++] = bd.doubleValue();
            }

            DescriptiveStatistics stat = new DescriptiveStatistics(ArrayUtils.subarray(input, begin, end));
            double resultDouble = stat.getMax();

            BigDecimal result = new BigDecimal(resultDouble);

            resultMap.put(well, result);
        }

        for (Well well : plate) {

            BigDecimal result = resultMap.get(well);
            BigDecimal returned = returnedMap.get(well);

            BigDecimal[] corrected = correctRoundingErrors(result, returned);

            assertEquals(corrected[0], corrected[1]);
        }
    }
}

From source file:com.github.jessemull.microflexbigdecimal.stat.MaxTest.java

/**
 * Tests the aggregated plate statistics method using the values between the indices of
 * the array.//from ww w. j  a  va  2  s  . co m
 */
@Test
public void testAggregatedSetArrayIndices() {

    int size = arrayIndices[0].first().size();
    int begin = random.nextInt(size - 5);
    int end = (begin + 4) + random.nextInt(size - (begin + 4) + 1);

    WellSet[] setArrayIndices = new WellSet[arrayIndices.length];

    for (int i = 0; i < setArrayIndices.length; i++) {
        setArrayIndices[i] = arrayIndices[i].dataSet();
    }

    Map<WellSet, BigDecimal> aggregatedReturnedMap = max.setsAggregated(setArrayIndices, begin, end - begin);
    Map<WellSet, BigDecimal> aggregatedResultMap = new TreeMap<WellSet, BigDecimal>();

    for (WellSet set : setArrayIndices) {

        List<BigDecimal> resultList = new ArrayList<BigDecimal>();

        for (Well well : set) {
            resultList.addAll(well.data().subList(begin, end));
        }

        double[] inputAggregated = new double[resultList.size()];

        for (int i = 0; i < resultList.size(); i++) {
            inputAggregated[i] = resultList.get(i).doubleValue();
        }

        DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated);
        double resultAggregatedDouble = statAggregated.getMax();

        BigDecimal aggregatedResult = new BigDecimal(resultAggregatedDouble);

        aggregatedResultMap.put(set, aggregatedResult);
    }

    for (WellSet plate : setArrayIndices) {

        BigDecimal result = aggregatedResultMap.get(plate);
        BigDecimal returned = aggregatedReturnedMap.get(plate);
        BigDecimal[] corrected = correctRoundingErrors(result, returned);

        assertEquals(corrected[0], corrected[1]);
    }
}

From source file:com.github.jessemull.microflex.stat.statbigdecimal.MaxBigDecimalTest.java

/**
 * Tests the aggregated plate statistics method using the values between the indices of
 * the collection.//from w w  w .j  a v  a2 s . co m
 */
@Test
public void testAggregatedPlateCollectionIndices() {

    List<PlateBigDecimal> collection = Arrays.asList(arrayIndices);

    int size = arrayIndices[0].first().size();
    int begin = random.nextInt(size - 5);
    int end = (begin + 4) + random.nextInt(size - (begin + 4) + 1);

    Map<PlateBigDecimal, BigDecimal> aggregatedReturnedMap = max.platesAggregated(arrayIndices, begin,
            end - begin);
    Map<PlateBigDecimal, BigDecimal> aggregatedResultMap = new TreeMap<PlateBigDecimal, BigDecimal>();

    for (PlateBigDecimal plate : collection) {

        List<BigDecimal> resultList = new ArrayList<BigDecimal>();

        for (WellBigDecimal well : plate) {
            resultList.addAll(well.data().subList(begin, end));
        }

        double[] inputAggregated = new double[resultList.size()];

        for (int i = 0; i < resultList.size(); i++) {
            inputAggregated[i] = resultList.get(i).doubleValue();
        }

        DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated);
        double resultAggregatedDouble = statAggregated.getMax();

        BigDecimal aggregatedResult = new BigDecimal(resultAggregatedDouble);

        aggregatedResultMap.put(plate, aggregatedResult);
    }

    for (PlateBigDecimal plate : arrayIndices) {

        BigDecimal result = aggregatedResultMap.get(plate);
        BigDecimal returned = aggregatedReturnedMap.get(plate);
        BigDecimal[] corrected = correctRoundingErrors(result, returned);

        assertEquals(corrected[0], corrected[1]);
    }
}

From source file:com.github.jessemull.microflex.stat.statbigdecimal.MaxBigDecimalTest.java

/**
 * Tests the aggregated plate statistics method using an array.
 *///from   w  w  w  .j  a v  a 2 s  .  c  om
@Test
public void testAggregatedSetArray() {

    WellSetBigDecimal[] setArray = new WellSetBigDecimal[array.length];

    for (int i = 0; i < setArray.length; i++) {
        setArray[i] = array[i].dataSet();
    }

    Map<WellSetBigDecimal, BigDecimal> aggregatedReturnedMap = max.setsAggregated(setArray);
    Map<WellSetBigDecimal, BigDecimal> aggregatedResultMap = new TreeMap<WellSetBigDecimal, BigDecimal>();

    for (WellSetBigDecimal set : setArray) {

        List<BigDecimal> resultList = new ArrayList<BigDecimal>();

        for (WellBigDecimal well : set) {
            resultList.addAll(well.data());
        }

        double[] inputAggregated = new double[resultList.size()];

        for (int i = 0; i < resultList.size(); i++) {
            inputAggregated[i] = resultList.get(i).doubleValue();
        }

        DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated);
        double resultAggregatedDouble = statAggregated.getMax();

        BigDecimal aggregatedResult = new BigDecimal(resultAggregatedDouble);
        aggregatedResultMap.put(set, aggregatedResult);
    }

    for (WellSetBigDecimal set : setArray) {

        BigDecimal result = aggregatedResultMap.get(set);
        BigDecimal returned = aggregatedReturnedMap.get(set);

        BigDecimal[] corrected = correctRoundingErrors(result, returned);

        assertEquals(corrected[0], corrected[1]);
    }

}

From source file:com.github.jessemull.microflex.stat.statbiginteger.MaxBigIntegerTest.java

/**
 * Tests the plate statistics method.//from  w w  w  .j  a  v a 2  s . c om
 */
@Test
public void testPlate() {

    for (PlateBigInteger plate : array) {

        Map<WellBigInteger, BigDecimal> resultMap = new TreeMap<WellBigInteger, BigDecimal>();
        Map<WellBigInteger, BigDecimal> returnedMap = max.plate(plate);

        for (WellBigInteger well : plate) {

            double[] input = new double[well.size()];
            int index = 0;

            for (BigInteger bi : well) {
                input[index++] = bi.doubleValue();
            }

            DescriptiveStatistics stat = new DescriptiveStatistics(input);
            double resultDouble = stat.getMax();

            BigDecimal result = new BigDecimal(resultDouble);

            resultMap.put(well, result);
        }

        for (WellBigInteger well : plate) {

            BigDecimal result = resultMap.get(well);
            BigDecimal returned = returnedMap.get(well);

            BigDecimal[] corrected = correctRoundingErrors(result, returned);

            assertEquals(corrected[0], corrected[1]);
        }
    }
}

From source file:com.github.jessemull.microflex.stat.statbiginteger.MaxBigIntegerTest.java

/**
 * Tests set calculation./*from  w w w  .j av a2 s .  c o  m*/
 */
@Test
public void testSet() {

    for (PlateBigInteger plate : array) {

        Map<WellBigInteger, BigDecimal> resultMap = new TreeMap<WellBigInteger, BigDecimal>();
        Map<WellBigInteger, BigDecimal> returnedMap = max.set(plate.dataSet());

        for (WellBigInteger well : plate) {

            double[] input = new double[well.size()];
            int index = 0;

            for (BigInteger bi : well) {
                input[index++] = bi.doubleValue();
            }

            DescriptiveStatistics stat = new DescriptiveStatistics(input);
            double resultDouble = stat.getMax();

            BigDecimal result = new BigDecimal(resultDouble);

            resultMap.put(well, result);
        }

        for (WellBigInteger well : plate) {

            BigDecimal result = resultMap.get(well);
            BigDecimal returned = returnedMap.get(well);

            BigDecimal[] corrected = correctRoundingErrors(result, returned);

            assertEquals(corrected[0], corrected[1]);
        }
    }

}

From source file:com.github.jessemull.microflex.stat.statbigdecimal.MaxBigDecimalTest.java

/**
 * Tests the plate statistics method using the values between the indices.
 *///from  w  w w.  j a va2  s.  c om
@Test
public void testPlateIndices() {

    for (PlateBigDecimal plate : arrayIndices) {

        int size = arrayIndices[0].first().size();
        int begin = random.nextInt(size - 5);
        int end = (begin + 4) + random.nextInt(size - (begin + 4) + 1);

        Map<WellBigDecimal, BigDecimal> resultMap = new TreeMap<WellBigDecimal, BigDecimal>();
        Map<WellBigDecimal, BigDecimal> returnedMap = max.plate(plate, begin, end - begin);

        for (WellBigDecimal well : plate) {

            double[] input = new double[well.size()];
            int index = 0;

            for (BigDecimal bd : well) {
                input[index++] = bd.doubleValue();
            }

            DescriptiveStatistics stat = new DescriptiveStatistics(ArrayUtils.subarray(input, begin, end));
            double resultDouble = stat.getMax();

            BigDecimal result = new BigDecimal(resultDouble);

            resultMap.put(well, result);
        }

        for (WellBigDecimal well : plate) {

            BigDecimal result = resultMap.get(well);
            BigDecimal returned = returnedMap.get(well);

            BigDecimal[] corrected = correctRoundingErrors(result, returned);

            assertEquals(corrected[0], corrected[1]);
        }
    }
}

From source file:com.github.jessemull.microflex.stat.statbigdecimal.MaxBigDecimalTest.java

/**
 * Tests set calculation using indices.//from   w w  w . j av a 2  s . c o  m
 */
@Test
public void testSetIndices() {

    for (PlateBigDecimal plate : arrayIndices) {

        int size = arrayIndices[0].first().size();
        int begin = random.nextInt(size - 5);
        int end = (begin + 4) + random.nextInt(size - (begin + 4) + 1);

        Map<WellBigDecimal, BigDecimal> resultMap = new TreeMap<WellBigDecimal, BigDecimal>();
        Map<WellBigDecimal, BigDecimal> returnedMap = max.set(plate.dataSet(), begin, end - begin);

        for (WellBigDecimal well : plate) {

            double[] input = new double[well.size()];
            int index = 0;

            for (BigDecimal bd : well) {
                input[index++] = bd.doubleValue();
            }

            DescriptiveStatistics stat = new DescriptiveStatistics(ArrayUtils.subarray(input, begin, end));
            double resultDouble = stat.getMax();

            BigDecimal result = new BigDecimal(resultDouble);

            resultMap.put(well, result);
        }

        for (WellBigDecimal well : plate) {

            BigDecimal result = resultMap.get(well);
            BigDecimal returned = returnedMap.get(well);

            BigDecimal[] corrected = correctRoundingErrors(result, returned);

            assertEquals(corrected[0], corrected[1]);
        }
    }
}

From source file:com.github.jessemull.microflex.stat.statbigdecimal.MaxBigDecimalTest.java

/**
 * Tests the aggregated plate statistics method using the values between the indices of
 * the collection.//from ww  w . j a v a  2  s  .  co m
 */
@Test
public void testAggregatedSetCollectionIndices() {

    int size = arrayIndices[0].first().size();
    int begin = random.nextInt(size - 5);
    int end = (begin + 4) + random.nextInt(size - (begin + 4) + 1);

    List<WellSetBigDecimal> collection = new ArrayList<WellSetBigDecimal>();

    for (PlateBigDecimal plate : arrayIndices) {
        collection.add(plate.dataSet());
    }

    Map<WellSetBigDecimal, BigDecimal> aggregatedReturnedMap = max.setsAggregated(collection, begin,
            end - begin);
    Map<WellSetBigDecimal, BigDecimal> aggregatedResultMap = new TreeMap<WellSetBigDecimal, BigDecimal>();

    for (WellSetBigDecimal set : collection) {

        List<BigDecimal> resultList = new ArrayList<BigDecimal>();

        for (WellBigDecimal well : set) {
            resultList.addAll(well.data().subList(begin, end));
        }

        double[] inputAggregated = new double[resultList.size()];

        for (int i = 0; i < resultList.size(); i++) {
            inputAggregated[i] = resultList.get(i).doubleValue();
        }

        DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated);
        double resultAggregatedDouble = statAggregated.getMax();

        BigDecimal aggregatedResult = new BigDecimal(resultAggregatedDouble);
        aggregatedResultMap.put(set, aggregatedResult);
    }

    for (WellSetBigDecimal set : collection) {

        BigDecimal result = aggregatedResultMap.get(set);
        BigDecimal returned = aggregatedReturnedMap.get(set);
        BigDecimal[] corrected = correctRoundingErrors(result, returned);

        assertEquals(corrected[0], corrected[1]);
    }
}