List of usage examples for org.apache.commons.math3.stat.descriptive DescriptiveStatistics getStandardDeviation
public double getStandardDeviation()
From source file:com.github.jessemull.microflexdouble.stat.SampleStandardDeviationTest.java
/** * Tests the plate statistics method.//from w w w . j av a 2 s . c o m */ @Test public void testPlate() { for (Plate plate : array) { Map<Well, Double> resultMap = new TreeMap<Well, Double>(); Map<Well, Double> returnedMap = deviation.plate(plate); for (Well well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = stat.getStandardDeviation(); resultMap.put(well, result); } for (Well well : plate) { double result = Precision.round(resultMap.get(well), precision); double returned = Precision.round(returnedMap.get(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflexdouble.stat.SampleStandardDeviationTest.java
/** * Tests set calculation./*from w w w . ja v a2s .com*/ */ @Test public void testSet() { for (Plate plate : array) { Map<Well, Double> resultMap = new TreeMap<Well, Double>(); Map<Well, Double> returnedMap = deviation.set(plate.dataSet()); for (Well well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = stat.getStandardDeviation(); resultMap.put(well, result); } for (Well well : plate) { double result = Precision.round(resultMap.get(well), precision); double returned = Precision.round(returnedMap.get(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflex.stat.statdouble.SampleStandardDeviationDoubleTest.java
/** * Tests the plate statistics method./*w w w . j a va 2s. c o m*/ */ @Test public void testPlate() { for (PlateDouble plate : array) { Map<WellDouble, Double> resultMap = new TreeMap<WellDouble, Double>(); Map<WellDouble, Double> returnedMap = deviation.plate(plate); for (WellDouble well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = stat.getStandardDeviation(); resultMap.put(well, result); } for (WellDouble well : plate) { double result = Precision.round(resultMap.get(well), precision); double returned = Precision.round(returnedMap.get(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflex.stat.statdouble.SampleStandardDeviationDoubleTest.java
/** * Tests set calculation.// w ww . ja v a 2 s .c o m */ @Test public void testSet() { for (PlateDouble plate : array) { Map<WellDouble, Double> resultMap = new TreeMap<WellDouble, Double>(); Map<WellDouble, Double> returnedMap = deviation.set(plate.dataSet()); for (WellDouble well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = stat.getStandardDeviation(); resultMap.put(well, result); } for (WellDouble well : plate) { double result = Precision.round(resultMap.get(well), precision); double returned = Precision.round(returnedMap.get(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflex.stat.statinteger.StandardDeviationIntegerTest.java
/** * Tests the plate statistics method./* w w w .j a va 2 s .c o m*/ */ @Test public void testPlate() { for (PlateInteger plate : array) { Map<WellInteger, Double> resultMap = new TreeMap<WellInteger, Double>(); Map<WellInteger, Double> returnedMap = deviation.plate(plate); for (WellInteger well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = stat.getStandardDeviation(); resultMap.put(well, result); } for (WellInteger well : plate) { double result = Precision.round(resultMap.get(well), precision); double returned = Precision.round(returnedMap.get(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflex.stat.statinteger.StandardDeviationIntegerTest.java
/** * Tests set calculation./*from w w w . ja va2 s . c om*/ */ @Test public void testSet() { for (PlateInteger plate : array) { Map<WellInteger, Double> resultMap = new TreeMap<WellInteger, Double>(); Map<WellInteger, Double> returnedMap = deviation.set(plate.dataSet()); for (WellInteger well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = stat.getStandardDeviation(); resultMap.put(well, result); } for (WellInteger well : plate) { double result = Precision.round(resultMap.get(well), precision); double returned = Precision.round(returnedMap.get(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflexdouble.stat.SampleStandardDeviationTest.java
/** * Tests well calculation./*from w w w . j a v a 2 s .c o m*/ */ @Test public void testWell() { for (Plate plate : array) { for (Well well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = Precision.round(stat.getStandardDeviation(), precision); double returned = Precision.round(deviation.well(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflex.stat.statdouble.SampleStandardDeviationDoubleTest.java
/** * Tests well calculation.//www . j a v a 2s . c o m */ @Test public void testWell() { for (PlateDouble plate : array) { for (WellDouble well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = Precision.round(stat.getStandardDeviation(), precision); double returned = Precision.round(deviation.well(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflex.stat.statinteger.StandardDeviationIntegerTest.java
/** * Tests well calculation./* w w w .j a v a 2 s . c o m*/ */ @Test public void testWell() { for (PlateInteger plate : array) { for (WellInteger well : plate) { double[] input = new double[well.size()]; int index = 0; for (double bd : well) { input[index++] = bd; ; } DescriptiveStatistics stat = new DescriptiveStatistics(input); double result = Precision.round(stat.getStandardDeviation(), precision); double returned = Precision.round(deviation.well(well), precision); assertTrue(result == returned); } } }
From source file:com.github.jessemull.microflexinteger.stat.StandardDeviationTest.java
/** * Tests the aggregated plate statistics method using a collection. *//*from w w w .j ava 2 s . c om*/ @Test public void testAggregatedPlateCollection() { List<Plate> collection = Arrays.asList(array); Map<Plate, Double> aggregatedReturnedMap = deviation.platesAggregated(collection); Map<Plate, Double> aggregatedResultMap = new TreeMap<Plate, Double>(); for (Plate plate : collection) { List<Double> resultList = new ArrayList<Double>(); for (Well well : plate) { resultList.addAll(well.toDouble()); } double[] inputAggregated = new double[resultList.size()]; for (int i = 0; i < resultList.size(); i++) { inputAggregated[i] = resultList.get(i); } DescriptiveStatistics statAggregated = new DescriptiveStatistics(inputAggregated); double aggregatedResult = statAggregated.getStandardDeviation(); aggregatedResultMap.put(plate, aggregatedResult); } for (Plate plate : collection) { double result = Precision.round(aggregatedResultMap.get(plate), precision); double returned = Precision.round(aggregatedReturnedMap.get(plate), precision); assertTrue(result == returned); } }