Example usage for org.apache.commons.math3.stat.ranking NaNStrategy MINIMAL

Introduction

In this page you can find the example usage for org.apache.commons.math3.stat.ranking NaNStrategy MINIMAL.

Prototype

NaNStrategy MINIMAL

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Document

NaNs are considered minimal in the ordering

Usage

From source file:ch.unil.genescore.vegas.GeneDataFakePhenotype.java

private void addSignal(double[] fakePheno) {

    for (int i = 0; i < fakePheno.length; i++) {
        fakePheno[i] = fakePheno[i] + fakeSignal_[i];
    }//from   www .j av  a  2s. com
    NaturalRanking ranking = new NaturalRanking(NaNStrategy.MINIMAL, TiesStrategy.MAXIMUM);
    double[] ranks = ranking.rank(fakePheno);
    for (int i = 0; i < fakePheno.length; i++) {
        //fakePheno[i]=myNormal.inverseCumulativeProbability(ranks[i]/(ranks.length+1));         
        fakePheno[i] = DistributionMethods.normalInverseCumulativeProbability(ranks[i] / (ranks.length + 1));

    }
}

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