List of usage examples for org.apache.commons.net.ftp FTPClient login
public boolean login(String username, String password) throws IOException
From source file:org.apache.sqoop.util.MainframeFTPClientUtils.java
public static FTPClient getFTPConnection(Configuration conf) throws IOException { FTPClient ftp = null; try {/* w w w . j av a 2s. com*/ String username = conf.get(DBConfiguration.USERNAME_PROPERTY); String password; if (username == null) { username = "anonymous"; password = ""; } else { password = DBConfiguration.getPassword((JobConf) conf); } String connectString = conf.get(DBConfiguration.URL_PROPERTY); String server = connectString; int port = 0; String[] parts = connectString.split(":"); if (parts.length == 2) { server = parts[0]; try { port = Integer.parseInt(parts[1]); } catch (NumberFormatException e) { LOG.warn("Invalid port number: " + e.toString()); } } if (null != mockFTPClient) { ftp = mockFTPClient; } else { ftp = new FTPClient(); } FTPClientConfig config = new FTPClientConfig(FTPClientConfig.SYST_MVS); ftp.configure(config); if (conf.getBoolean(JobBase.PROPERTY_VERBOSE, false)) { ftp.addProtocolCommandListener(new PrintCommandListener(new PrintWriter(System.out), true)); } try { if (port > 0) { ftp.connect(server, port); } else { ftp.connect(server); } } catch (IOException ioexp) { throw new IOException("Could not connect to server " + server, ioexp); } int reply = ftp.getReplyCode(); if (!FTPReply.isPositiveCompletion(reply)) { throw new IOException("FTP server " + server + " refused connection:" + ftp.getReplyString()); } LOG.info("Connected to " + server + " on " + (port > 0 ? port : ftp.getDefaultPort())); if (!ftp.login(username, password)) { ftp.logout(); throw new IOException("Could not login to server " + server + ":" + ftp.getReplyString()); } // set ASCII transfer mode ftp.setFileType(FTP.ASCII_FILE_TYPE); // Use passive mode as default. ftp.enterLocalPassiveMode(); LOG.info("System type detected: " + ftp.getSystemType()); } catch (IOException ioe) { if (ftp != null && ftp.isConnected()) { try { ftp.disconnect(); } catch (IOException f) { // do nothing } } ftp = null; throw ioe; } return ftp; }
From source file:org.apache.tools.ant.taskdefs.optional.net2.FTP2.java
/** * Runs the task./* www .ja v a 2 s . com*/ * * @throws BuildException if the task fails or is not configured * correctly. */ @Override public void execute() throws BuildException { checkAttributes(); FTPClient ftp = null; try { log("Opening FTP connection to " + server, Project.MSG_VERBOSE); ftp = new FTPClient(); if (this.isConfigurationSet) { ftp = FTPConfigurator.configure(ftp, this); } ftp.setRemoteVerificationEnabled(enableRemoteVerification); if (this.proxyServer != null) { // Connect through an FTP proxy. // Get FTP proxy credentials (optional). String proxyUserId; char[] proxyPassword; { PasswordAuthentication pa = FTP2.getPasswordAuthentication(this.proxyServer, this.proxyPort, this.proxyUserid, this.proxyPassword, RequestorType.PROXY); if (pa == null) { proxyUserId = null; proxyPassword = null; } else { proxyUserId = pa.getUserName(); if (proxyUserId == null) throw new BuildException("Proxy user ID missing"); proxyPassword = pa.getPassword(); if (proxyPassword == null) throw new BuildException("Proxy password missing"); } } // Get remote FTP server credentials (mandatory). String serverUserId; char[] serverPassword; { PasswordAuthentication pa = FTP2.getPasswordAuthentication(this.server, this.port, this.userid, this.password, RequestorType.SERVER); if (pa == null) throw new BuildException("User ID and password missing"); serverUserId = pa.getUserName(); if (serverUserId == null) throw new BuildException("User ID missing"); serverPassword = pa.getPassword(); if (serverPassword == null) throw new BuildException("Password missing"); } // Connect to the FTP proxy. this.log("Opening FTP connection to proxy server \"" + this.proxyServer + "\" on port " + this.proxyPort, Project.MSG_VERBOSE); ftp.connect(this.proxyServer, this.proxyPort); if (!FTPReply.isPositiveCompletion(ftp.getReplyCode())) { throw new BuildException("FTP connection to proxy server failed: " + ftp.getReplyString()); } this.log("connected to proxy server", Project.MSG_VERBOSE); // Authenticate with the FTP proxy (optional). if (proxyUserId != null) { this.log("logging in to FTP proxy server", Project.MSG_VERBOSE); if (!ftp.login(proxyUserId, new String(proxyPassword))) { throw new BuildException("Could not login to FTP proxy server"); } } // Log in to the remote FTP server. this.log("logging in to FTP server", Project.MSG_VERBOSE); String userid2 = serverUserId + '@' + this.server; if (this.port != FTP2.DEFAULT_FTP_PORT) userid2 += ":" + this.port; if (this.account == null ? !ftp.login(userid2, new String(serverPassword)) : !ftp.login(userid2, new String(serverPassword), this.account)) throw new BuildException("Could not login to FTP server"); this.log("login succeeded", Project.MSG_VERBOSE); } else { // Direct connection to remote FTP server. // Get remote FTP server credentials (mandatory). String serverUserId; char[] serverPassword; { PasswordAuthentication pa = FTP2.getPasswordAuthentication(this.server, this.port, this.userid, this.password, RequestorType.SERVER); if (pa == null) throw new BuildException("User ID and password missing"); serverUserId = pa.getUserName(); if (serverUserId == null) throw new BuildException("User ID missing"); serverPassword = pa.getPassword(); if (serverPassword == null) throw new BuildException("Password missing"); } // Connect to the remote FTP server. this.log("Opening FTP connection to " + this.server, Project.MSG_VERBOSE); ftp.connect(this.server, this.port); if (!FTPReply.isPositiveCompletion(ftp.getReplyCode())) { throw new BuildException("FTP connection failed: " + ftp.getReplyString()); } this.log("connected", Project.MSG_VERBOSE); // Log in to the remote FTP server. this.log("logging in to FTP server", Project.MSG_VERBOSE); if (this.account == null ? !ftp.login(serverUserId, new String(serverPassword)) : !ftp.login(serverUserId, new String(serverPassword), this.account)) throw new BuildException("Could not login to FTP server"); this.log("login succeeded", Project.MSG_VERBOSE); } if (binary) { ftp.setFileType(org.apache.commons.net.ftp.FTP.BINARY_FILE_TYPE); if (!FTPReply.isPositiveCompletion(ftp.getReplyCode())) { throw new BuildException("could not set transfer type: " + ftp.getReplyString()); } } else { ftp.setFileType(org.apache.commons.net.ftp.FTP.ASCII_FILE_TYPE); if (!FTPReply.isPositiveCompletion(ftp.getReplyCode())) { throw new BuildException("could not set transfer type: " + ftp.getReplyString()); } } if (passive) { log("entering passive mode", Project.MSG_VERBOSE); ftp.enterLocalPassiveMode(); if (!FTPReply.isPositiveCompletion(ftp.getReplyCode())) { throw new BuildException("could not enter into passive " + "mode: " + ftp.getReplyString()); } } // If an initial command was configured then send it. // Some FTP servers offer different modes of operation, // E.G. switching between a UNIX file system mode and // a legacy file system. if (this.initialSiteCommand != null) { RetryHandler h = new RetryHandler(this.retriesAllowed, this); final FTPClient lftp = ftp; executeRetryable(h, new Retryable() { @Override public void execute() throws IOException { doSiteCommand(lftp, FTP2.this.initialSiteCommand); } }, "initial site command: " + this.initialSiteCommand); } // For a unix ftp server you can set the default mask for all files // created. if (umask != null) { RetryHandler h = new RetryHandler(this.retriesAllowed, this); final FTPClient lftp = ftp; executeRetryable(h, new Retryable() { @Override public void execute() throws IOException { doSiteCommand(lftp, "umask " + umask); } }, "umask " + umask); } // If the action is MK_DIR, then the specified remote // directory is the directory to create. if (action == MK_DIR) { RetryHandler h = new RetryHandler(this.retriesAllowed, this); final FTPClient lftp = ftp; executeRetryable(h, new Retryable() { @Override public void execute() throws IOException { makeRemoteDir(lftp, remotedir); } }, remotedir); } else if (action == SITE_CMD) { RetryHandler h = new RetryHandler(this.retriesAllowed, this); final FTPClient lftp = ftp; executeRetryable(h, new Retryable() { @Override public void execute() throws IOException { doSiteCommand(lftp, FTP2.this.siteCommand); } }, "Site Command: " + this.siteCommand); } else { if (remotedir != null) { log("changing the remote directory to " + remotedir, Project.MSG_VERBOSE); ftp.changeWorkingDirectory(remotedir); if (!FTPReply.isPositiveCompletion(ftp.getReplyCode())) { throw new BuildException("could not change remote " + "directory: " + ftp.getReplyString()); } } if (newerOnly && timeDiffAuto) { // in this case we want to find how much time span there is between local // and remote timeDiffMillis = getTimeDiff(ftp); } log(ACTION_STRS[action] + " " + ACTION_TARGET_STRS[action]); transferFiles(ftp); } } catch (IOException ex) { throw new BuildException("error during FTP transfer: " + ex, ex); } finally { if (ftp != null && ftp.isConnected()) { try { log("disconnecting", Project.MSG_VERBOSE); ftp.logout(); ftp.disconnect(); } catch (IOException ex) { // ignore it } } } }
From source file:org.blue.star.plugins.check_ftp.java
public boolean execute_check() { /* Declare variables */ FTPClient ftp = new FTPClient(); File filename = null;/* w w w. ja v a2 s . c o m*/ FileChannel channel; InputStream is; OutputStream os; int reply; if (super.verbose > 0) verbose = true; /* Configure client to meet our requirements */ ftp.setDefaultPort(port); ftp.setDefaultTimeout(timeout); if (verbose) { System.out.println("Using FTP Server: " + hostname); System.out.println("Using FTP Port: " + port); System.out.println("Using Timeout of: " + timeout); } if (passive) { ftp.enterLocalPassiveMode(); if (verbose) System.out.println("Using Passive Mode"); } try { filename = new File(file); channel = new RandomAccessFile(filename, "rw").getChannel(); if (verbose) System.out.println("Attempting FTP Connection to " + hostname); ftp.connect(hostname); reply = ftp.getReplyCode(); /* Test to see if we actually managed to connect */ if (!FTPReply.isPositiveCompletion(reply)) { if (verbose) System.out.println("FTP Connection to " + hostname + " failed"); check_state = common_h.STATE_CRITICAL; check_message = ftp.getReplyString(); filename.delete(); ftp.disconnect(); return true; } /* Try and login if we're using username/password */ if (username != null && password != null) { if (verbose) System.out.println("Attempting to log in into FTP Server " + hostname); if (!ftp.login(username, password)) { if (verbose) System.out.println("Unable to log in to FTP Server " + hostname); check_state = common_h.STATE_CRITICAL; check_message = ftp.getReplyString(); ftp.disconnect(); filename.delete(); return true; } } if (verbose) System.out.println("Attempting to change to required directory"); /* Try and change to the given directory */ if (!ftp.changeWorkingDirectory(directory)) { if (verbose) System.out.println("Required directory cannot be found!"); check_state = common_h.STATE_WARNING; check_message = ftp.getReplyString(); ftp.disconnect(); filename.delete(); return true; } if (verbose) System.out.println("Attempting to retrieve specified file!"); /* Try to get Stream on Remote File! */ is = ftp.retrieveFileStream(file); if (is == null) { if (verbose) System.out.println("Unable to locate required file."); check_state = common_h.STATE_WARNING; check_message = ftp.getReplyString(); ftp.disconnect(); filename.delete(); return true; } /* OutputStream */ os = Channels.newOutputStream(channel); /* Create the buffer */ byte[] buf = new byte[4096]; if (verbose) System.out.println("Beginning File transfer..."); for (int len = -1; (len = is.read(buf)) != -1;) os.write(buf, 0, len); if (verbose) { System.out.println("...transfer complete."); System.out.println("Attempting to finalise Command"); } /* Finalise the transfer details */ if (!ftp.completePendingCommand()) { if (verbose) System.out.println("Unable to finalise command"); check_state = common_h.STATE_WARNING; check_message = ftp.getReplyString(); ftp.disconnect(); filename.delete(); return true; } /* Clean up */ if (verbose) System.out.println("Check Completed."); check_state = common_h.STATE_OK; check_message = ftp.getReplyString(); /* Close out things */ is.close(); os.close(); channel.close(); filename.delete(); } catch (IOException e) { check_state = common_h.STATE_CRITICAL; check_message = e.getMessage(); if (filename != null) filename.delete(); } finally { if (ftp.isConnected()) { try { ftp.logout(); ftp.disconnect(); } catch (Exception e) { } } } return true; }
From source file:org.codice.alliance.nsili.source.NsiliSource.java
/** * Uses FTPClient to obtain the IOR string from the provided URL via FTP. *//* w w w. jav a 2 s .co m*/ private void getIorStringFromFtpSource() { URI uri = null; try { uri = new URI(iorUrl); } catch (URISyntaxException e) { LOGGER.error("{} : Invalid URL specified for IOR string: {} {}", id, iorUrl, e.getMessage()); LOGGER.debug("{} : Invalid URL specified for IOR string: {}", id, iorUrl, e); } FTPClient ftpClient = new FTPClient(); try { if (uri.getPort() > 0) { ftpClient.connect(uri.getHost(), uri.getPort()); } else { ftpClient.connect(uri.getHost()); } if (!ftpClient.login(serverUsername, serverPassword)) { LOGGER.error("{} : FTP server log in unsuccessful.", id); } else { int timeoutMsec = clientTimeout * 1000; ftpClient.setConnectTimeout(timeoutMsec); ftpClient.setControlKeepAliveReplyTimeout(timeoutMsec); ftpClient.setDataTimeout(timeoutMsec); ftpClient.enterLocalPassiveMode(); ftpClient.setFileType(FTP.BINARY_FILE_TYPE); InputStream inputStream = ftpClient.retrieveFileStream(uri.getPath()); iorString = IOUtils.toString(inputStream, StandardCharsets.ISO_8859_1.name()); //Remove leading/trailing whitespace as the CORBA init can't handle that. iorString = iorString.trim(); } } catch (Exception e) { LOGGER.warn("{} : Error retrieving IOR file for {}. {}", id, iorUrl, e.getMessage()); LOGGER.debug("{} : Error retrieving IOR file for {}.", id, iorUrl, e); } }
From source file:org.compiere.model.MMediaServer.java
/** * (Re-)Deploy all media// w w w . ja v a 2s . c o m * @param media array of media to deploy * @return true if deployed */ public boolean deploy(MMedia[] media) { // Check whether the host is our example localhost, we will not deploy locally, but this is no error if (this.getIP_Address().equals("127.0.0.1") || this.getName().equals("localhost")) { log.warning("You have not defined your own server, we will not really deploy to localhost!"); return true; } FTPClient ftp = new FTPClient(); try { ftp.connect(getIP_Address()); if (ftp.login(getUserName(), getPassword())) log.info("Connected to " + getIP_Address() + " as " + getUserName()); else { log.warning("Could NOT connect to " + getIP_Address() + " as " + getUserName()); return false; } } catch (Exception e) { log.log(Level.WARNING, "Could NOT connect to " + getIP_Address() + " as " + getUserName(), e); return false; } boolean success = true; String cmd = null; // List the files in the directory try { cmd = "cwd"; ftp.changeWorkingDirectory(getFolder()); // cmd = "list"; String[] fileNames = ftp.listNames(); log.log(Level.FINE, "Number of files in " + getFolder() + ": " + fileNames.length); /* FTPFile[] files = ftp.listFiles(); log.config("Number of files in " + getFolder() + ": " + files.length); for (int i = 0; i < files.length; i++) log.fine(files[i].getTimestamp() + " \t" + files[i].getName());*/ // cmd = "bin"; ftp.setFileType(FTPClient.BINARY_FILE_TYPE); // for (int i = 0; i < media.length; i++) { if (!media[i].isSummary()) { log.log(Level.INFO, " Deploying Media Item:" + media[i].get_ID() + media[i].getExtension()); MImage thisImage = media[i].getImage(); // Open the file and output streams byte[] buffer = thisImage.getData(); ByteArrayInputStream is = new ByteArrayInputStream(buffer); String fileName = media[i].get_ID() + media[i].getExtension(); cmd = "put " + fileName; ftp.storeFile(fileName, is); is.close(); } } } catch (Exception e) { log.log(Level.WARNING, cmd, e); success = false; } // Logout from the FTP Server and disconnect try { cmd = "logout"; ftp.logout(); cmd = "disconnect"; ftp.disconnect(); } catch (Exception e) { log.log(Level.WARNING, cmd, e); } ftp = null; return success; }
From source file:org.drftpd.tests.ConnectionStressTest.java
public void run() { try {//from ww w. ja v a 2 s. c o m FTPClient c = new FTPClient(); c.configure(ftpConfig); logger.debug("Trying to connect"); c.connect("127.0.0.1", 21211); logger.debug("Connected"); c.setSoTimeout(5000); if (!FTPReply.isPositiveCompletion(c.getReplyCode())) { logger.debug("Houston, we have a problem. D/C"); c.disconnect(); throw new Exception(); } if (c.login("drftpd", "drftpd")) { logger.debug("Logged-in, now waiting 5 secs and kill the thread."); _sc.addSuccess(); Thread.sleep(5000); c.disconnect(); } else { logger.debug("Login failed, D/C!"); throw new Exception(); } } catch (Exception e) { logger.debug(e, e); _sc.addFailure(); } logger.debug("exiting"); }
From source file:org.ecoinformatics.datamanager.download.DownloadHandler.java
/** * Gets content from given source and writes it to DataStorageInterface * to store them. This method will be called by run() * // w ww . j av a 2 s . co m * @param resourceName the URL to the source data to be retrieved */ protected boolean getContentFromSource(String resourceName) { boolean successFlag = false; QualityCheck onlineURLsQualityCheck = null; boolean onlineURLsException = false; // used to determine status of onlineURLs quality check if (resourceName != null) { resourceName = resourceName.trim(); } if (resourceName != null && (resourceName.startsWith("http://") || resourceName.startsWith("https://") || resourceName.startsWith("file://") || resourceName.startsWith("ftp://"))) { // get the data from a URL int responseCode = 0; String responseMessage = null; try { URL url = new URL(resourceName); boolean isFTP = false; if (entity != null) { String contentType = null; // Find the right MIME type and set it as content type if (resourceName.startsWith("http")) { HttpURLConnection httpURLConnection = (HttpURLConnection) url.openConnection(); httpURLConnection.setRequestMethod("HEAD"); httpURLConnection.connect(); contentType = httpURLConnection.getContentType(); responseCode = httpURLConnection.getResponseCode(); responseMessage = httpURLConnection.getResponseMessage(); } else if (resourceName.startsWith("file")) { URLConnection urlConnection = url.openConnection(); urlConnection.connect(); contentType = urlConnection.getContentType(); } else { // FTP isFTP = true; contentType = "application/octet-stream"; } entity.setUrlContentType(contentType); } if (!isFTP) { // HTTP(S) or FILE InputStream filestream = url.openStream(); try { successFlag = this.writeRemoteInputStreamIntoDataStorage(filestream); } catch (IOException e) { exception = e; String errorMessage = e.getMessage(); if (errorMessage.startsWith(ONLINE_URLS_EXCEPTION_MESSAGE)) { onlineURLsException = true; } } finally { filestream.close(); } } else { // FTP String[] urlParts = resourceName.split("/"); String address = urlParts[2]; String dir = "/"; for (int i = 3; i < urlParts.length - 1; i++) { dir += urlParts[i] + "/"; } String fileName = urlParts[urlParts.length - 1]; FTPClient ftpClient = new FTPClient(); ftpClient.connect(address); ftpClient.login(ANONYMOUS, anonymousFtpPasswd); ftpClient.changeWorkingDirectory(dir); ftpClient.setFileType(FTP.BINARY_FILE_TYPE); ftpClient.enterLocalPassiveMode(); // necessary to avoid firewall blocking InputStream filestream = ftpClient.retrieveFileStream(fileName); try { successFlag = this.writeRemoteInputStreamIntoDataStorage(filestream); } catch (IOException e) { exception = e; String errorMessage = e.getMessage(); if (errorMessage.startsWith(ONLINE_URLS_EXCEPTION_MESSAGE)) { onlineURLsException = true; } } finally { try { filestream.close(); } catch (IOException e) { exception = new DataSourceNotFoundException(String .format("Error closing local file '%s': %s", resourceName, e.getMessage())); onlineURLsException = true; } } // logout and disconnect if FTP session if (resourceName.startsWith("ftp") && ftpClient != null) { try { ftpClient.enterLocalActiveMode(); ftpClient.logout(); ftpClient.disconnect(); } catch (IOException e) { exception = new DataSourceNotFoundException( String.format("Error disconnecting from FTP with resource '%s': %s", resourceName, e.getMessage())); onlineURLsException = true; } } } } catch (MalformedURLException e) { String eClassName = e.getClass().getName(); String eMessage = String.format("%s: %s", eClassName, e.getMessage()); exception = new DataSourceNotFoundException( String.format("The URL '%s' is a malformed URL: %s", resourceName, eMessage)); } catch (IOException e) { String eClassName = e.getClass().getName(); String eMessage = String.format("%s: %s", eClassName, e.getMessage()); if (responseCode > 0) { eMessage = String.format("Response Code: %d %s; %s", responseCode, responseMessage, eMessage); } exception = new DataSourceNotFoundException( String.format("The URL '%s' is not reachable: %s", resourceName, eMessage)); } // Initialize the "Online URLs are live" quality check String qualityCheckIdentifier = "onlineURLs"; QualityCheck qualityCheckTemplate = QualityReport.getQualityCheckTemplate(qualityCheckIdentifier); onlineURLsQualityCheck = new QualityCheck(qualityCheckIdentifier, qualityCheckTemplate); if (QualityCheck.shouldRunQualityCheck(entity, onlineURLsQualityCheck)) { String resourceNameEscaped = embedInCDATA(resourceName); if (!onlineURLsException) { onlineURLsQualityCheck.setStatus(Status.valid); onlineURLsQualityCheck.setFound("true"); onlineURLsQualityCheck.setExplanation("Succeeded in accessing URL: " + resourceNameEscaped); } else { onlineURLsQualityCheck.setFailedStatus(); onlineURLsQualityCheck.setFound("false"); String explanation = "Failed to access URL: " + resourceNameEscaped; explanation = explanation + "; " + embedInCDATA(exception.getMessage()); onlineURLsQualityCheck.setExplanation(explanation); } entity.addQualityCheck(onlineURLsQualityCheck); } return successFlag; } else if (resourceName != null && resourceName.startsWith("ecogrid://")) { // get the docid from url int start = resourceName.indexOf("/", 11) + 1; //log.debug("start: " + start); int end = resourceName.indexOf("/", start); if (end == -1) { end = resourceName.length(); } //log.debug("end: " + end); String ecogridIdentifier = resourceName.substring(start, end); // pass this docid and get data item //System.out.println("the endpoint is "+ECOGRIDENDPOINT); //System.out.println("The identifier is "+ecogridIdentifier); //return false; return getContentFromEcoGridSource(ecogridEndPoint, ecogridIdentifier); } else if (resourceName != null && resourceName.startsWith("srb://")) { // get srb docid from the url String srbIdentifier = transformSRBurlToDocid(resourceName); // reset endpoint for srb (This is hack we need to figure ou // elegent way to do this //mEndPoint = Config.getValue("//ecogridService/srb/endPoint"); // pass this docid and get data item //log.debug("before get srb data"); return getContentFromEcoGridSource(SRBENDPOINT, srbIdentifier); } else { successFlag = false; return successFlag; } }
From source file:org.fabric3.binding.ftp.runtime.FtpTargetInterceptor.java
public Message invoke(Message msg) { FTPClient ftpClient = new FTPClient(); ftpClient.setSocketFactory(factory); try {//from w w w . ja v a 2 s. c o m if (timeout > 0) { ftpClient.setDefaultTimeout(timeout); ftpClient.setDataTimeout(timeout); } monitor.onConnect(hostAddress, port); ftpClient.connect(hostAddress, port); monitor.onResponse(ftpClient.getReplyString()); String type = msg.getWorkContext().getHeader(String.class, FtpConstants.HEADER_CONTENT_TYPE); if (type != null && type.equalsIgnoreCase(FtpConstants.BINARY_TYPE)) { monitor.onCommand("TYPE I"); ftpClient.setFileType(FTP.BINARY_FILE_TYPE); monitor.onResponse(ftpClient.getReplyString()); } else if (type != null && type.equalsIgnoreCase(FtpConstants.TEXT_TYPE)) { monitor.onCommand("TYPE A"); ftpClient.setFileType(FTP.ASCII_FILE_TYPE); monitor.onResponse(ftpClient.getReplyString()); } /*if (!ftpClient.login(security.getUser(), security.getPassword())) { throw new ServiceUnavailableException("Invalid credentials"); }*/ // TODO Fix above monitor.onAuthenticate(); ftpClient.login(security.getUser(), security.getPassword()); monitor.onResponse(ftpClient.getReplyString()); Object[] args = (Object[]) msg.getBody(); String fileName = (String) args[0]; String remoteFileLocation = fileName; InputStream data = (InputStream) args[1]; if (active) { monitor.onCommand("ACTV"); ftpClient.enterLocalActiveMode(); monitor.onResponse(ftpClient.getReplyString()); } else { monitor.onCommand("PASV"); ftpClient.enterLocalPassiveMode(); monitor.onResponse(ftpClient.getReplyString()); } if (commands != null) { for (String command : commands) { monitor.onCommand(command); ftpClient.sendCommand(command); monitor.onResponse(ftpClient.getReplyString()); } } if (remotePath != null && remotePath.length() > 0) { remoteFileLocation = remotePath.endsWith("/") ? remotePath + fileName : remotePath + "/" + fileName; } String remoteTmpFileLocation = remoteFileLocation; if (tmpFileSuffix != null && tmpFileSuffix.length() > 0) { remoteTmpFileLocation += tmpFileSuffix; } monitor.onCommand("STOR " + remoteFileLocation); if (!ftpClient.storeFile(remoteTmpFileLocation, data)) { throw new ServiceUnavailableException("Unable to upload data. Response sent from server: " + ftpClient.getReplyString() + " ,remoteFileLocation:" + remoteFileLocation); } monitor.onResponse(ftpClient.getReplyString()); //Rename file back to original name if temporary file suffix was used while transmission. if (!remoteTmpFileLocation.equals(remoteFileLocation)) { ftpClient.rename(remoteTmpFileLocation, remoteFileLocation); } } catch (IOException e) { throw new ServiceUnavailableException(e); } // reset the message to return an empty response msg.reset(); return msg; }
From source file:org.geon.XMLToADN.java
private String process(String xmlString) { Map metadata = new HashMap(); // Extracting user input (name/value pairs) into a hashmap. int nameStartInd = xmlString.toLowerCase().indexOf("<name>"); while (nameStartInd != -1) { int nameEndInd = xmlString.toLowerCase().indexOf("</name>"); String name = xmlString.substring(nameStartInd + 6, nameEndInd); xmlString = xmlString.substring(nameEndInd + 7); int valueStartInd = xmlString.toLowerCase().indexOf("<value>"); int valueEndInd = xmlString.toLowerCase().indexOf("</value>"); String value = xmlString.substring(valueStartInd + 7, valueEndInd); xmlString = xmlString.substring(valueEndInd + 8); metadata.put(name, value);/*from ww w . ja va 2 s . co m*/ nameStartInd = xmlString.toLowerCase().indexOf("<name>"); } String errMsg = ""; String title = (String) metadata.get("title"); String subjectss = (String) metadata.get("subjects"); String keywords = (String) metadata.get("keywords"); String permission = (String) metadata.get("permission"); String description = (String) metadata.get("description"); String personOrOrg1 = (String) metadata.get("person1"); String role1 = (String) metadata.get("role1"); String nametitle1 = (String) metadata.get("nametitle1"); String firstname1 = (String) metadata.get("firstname1"); String middlename1 = (String) metadata.get("middlename1"); String lastname1 = (String) metadata.get("lastname1"); String org1 = (String) metadata.get("org1"); String email1 = (String) metadata.get("email1"); String homepage1 = (String) metadata.get("homepage1"); // handle spatial coverage // String min_altitude = (String) metadata.get("min_altitude"); // String max_altitude = (String) metadata.get("max_altitude"); String hrizontal = (String) metadata.get("hrizontal"); String projection = (String) metadata.get("projection"); String coordinate = (String) metadata.get("coordinate"); // handle temporal coverage String time = (String) metadata.get("time"); String geologic_time = (String) metadata.get("geologic_time"); String begin_age = (String) metadata.get("begin_age"); String end_age = (String) metadata.get("end_age"); // handle present coverage String begin_date = (String) metadata.get("begindate"); String end_date = (String) metadata.get("enddate"); String t = time.trim(); StringTokenizer stb = !time.equals("present") ? null : new StringTokenizer(begin_date, "/"); int bm = !time.equals("present") ? 0 : Integer.parseInt(stb.nextToken()); int bd = !time.equals("present") ? 0 : Integer.parseInt(stb.nextToken()); int by = !time.equals("present") ? 0 : Integer.parseInt(stb.nextToken()); StringTokenizer ste = !t.equals("present") ? null : new StringTokenizer(end_date, "/"); int em; if (!t.equals("present")) { em = 0; } else { em = Integer.parseInt(ste.nextToken()); } int ed; if (!t.equals("present")) { ed = 0; } else { ed = Integer.parseInt(ste.nextToken()); } int ey; if (!t.equals("present")) { ey = 0; } else { ey = Integer.parseInt(ste.nextToken()); } String begin_hour = (String) metadata.get("begin_hour"); String end_hour = (String) metadata.get("end_hour"); String begin_min = (String) metadata.get("begin_min"); String end_min = (String) metadata.get("end_min"); String begin_sec = (String) metadata.get("begin_sec"); String end_sec = (String) metadata.get("end_sec"); int bHour = Integer.parseInt(begin_hour); int bMin = Integer.parseInt(begin_min); int bSec = Integer.parseInt(begin_sec); int eHour = Integer.parseInt(end_hour); int eMin = Integer.parseInt(end_min); int eSec = Integer.parseInt(end_sec); String begin_month; String begin_day; String begin_year; String end_month; String end_day; String end_year; boolean earlier = true; if ((by < ey) || (by == ey && bm < em) || (by == ey && bm == em && bd < ed) || (by == ey && bm == em && bd == ed && bHour < eHour) || (by == ey && bm == em && bd == ed && bHour == eHour && bMin < eMin) || (by == ey && bm == em && bd == ed && bHour == eHour && bMin == eMin && bSec <= eSec)) { // begin date and time is earlier begin_month = Integer.toString(bm); begin_day = Integer.toString(bd); begin_year = Integer.toString(by); end_month = Integer.toString(em); end_day = Integer.toString(ed); end_year = Integer.toString(ey); } else { earlier = false; begin_month = Integer.toString(em); begin_day = Integer.toString(ed); begin_year = Integer.toString(ey); end_month = Integer.toString(bm); end_day = Integer.toString(bd); end_year = Integer.toString(by); String tmp = begin_hour; begin_hour = end_hour; end_hour = tmp; tmp = begin_min; begin_min = end_min; end_min = tmp; tmp = begin_sec; begin_sec = end_sec; end_sec = tmp; } String time_choice; if (by >= 0 && ey >= 0) { time_choice = "AD"; } else if (by < 0 && ey < 0) { time_choice = "BC"; } else { time_choice = "direct"; } String bc_begin_year = earlier ? Integer.toString(-by) : Integer.toString(-ey); String bc_end_year = earlier ? Integer.toString(-ey) : Integer.toString(-by); String d_begin_year = earlier ? Integer.toString(-by) : Integer.toString(-ey); String d_end_year = earlier ? Integer.toString(ey) : Integer.toString(by); try { ObjectFactory factory = new ObjectFactory(); ADNmetadataType itemRecord = (ADNmetadataType) factory .newInstance(Class.forName("org.dlese.adn.ItemRecord")); // ////////////////////////////////////////////////////////// // // // // general // // // ///////////////////////////////////////////////////////// GeneralType general = (GeneralType) factory.newInstance(Class.forName("org.dlese.adn.GeneralType")); general.setTitle(title); general.setDescription(description); general.setLanguage("en"); // subjects SubjectsType subjects = (SubjectsType) factory.newInstance(Class.forName("org.dlese.adn.SubjectsType")); general.setSubjects(subjects); subjects.getSubject().add(subjectss); // keywords if (keywords != null) { KeywordsType keywordsType = (KeywordsType) factory .newInstance(Class.forName("org.dlese.adn.KeywordsType")); general.setKeywords(keywordsType); StringTokenizer st = new StringTokenizer(keywords, ","); while (st.hasMoreTokens()) { String tmp = st.nextToken().trim(); KeywordType keyword = (KeywordType) factory .newInstance(Class.forName("org.dlese.adn.KeywordType")); keyword.setValue(tmp); keywordsType.getKeyword().add(keyword); } } // lifecycle LifecycleType lifecycle = (LifecycleType) factory .newInstance(Class.forName("org.dlese.adn.LifecycleType")); // set the first contributor ContributorsLifecycleType contributors = (ContributorsLifecycleType) factory .newInstance(Class.forName("org.dlese.adn.ContributorsLifecycleType")); lifecycle.setContributors(contributors); ContributorLifecycleType author = (ContributorLifecycleType) factory .newInstance(Class.forName("org.dlese.adn.ContributorLifecycleType")); author.setRole(role1); if (personOrOrg1.equals("Person")) { PersonType person = (PersonType) factory.newInstance(Class.forName("org.dlese.adn.PersonType")); person.setNameTitle(nametitle1); person.setNameFirst(firstname1); person.setNameMiddle(middlename1); person.setNameLast(lastname1); person.setInstName(org1); person.setEmailPrimary(email1); author.setPerson(person); contributors.getContributor().add(author); } else { OrganizationType org = (OrganizationType) factory .newInstance(Class.forName("org.dlese.adn.OrganizationType")); org.setInstName(org1); contributors.getContributor().add(org); } // ////////////////////////////////////////////////////////// // // // // metametadata // // // ///////////////////////////////////////////////////////// MetaMetadataType metaMetadata = (MetaMetadataType) factory .newInstance(Class.forName("org.dlese.adn.MetaMetadataType")); CatalogEntriesType catalogEntries = (CatalogEntriesType) factory .newInstance(Class.forName("org.dlese.adn.CatalogEntriesType")); CatalogType catalog = (CatalogType) factory.newInstance(Class.forName("org.dlese.adn.CatalogType")); catalog.setValue("shapefile"); // get unique id // UUIDGenerator ug = UUIDGenerator.getInstance(); // UUID uuid = ug.generateTimeBasedUUID(); UUIDGen uuidgen = new UUIDGen(); String uuid = uuidgen.generateUUID(); catalog.setEntry("GEON-" + uuid); catalogEntries.getCatalog().add(catalog); metaMetadata.setCatalogEntries(catalogEntries); DateInfoType dateInfo = (DateInfoType) factory.newInstance(Class.forName("org.dlese.adn.DateInfoType")); Calendar now = Calendar.getInstance(); // dateInfo.setCreated(now.get(Calendar.YEAR)+"-"+now.get(Calendar.MONTH)+"-"+now.get(Calendar.DAY_OF_MONTH)); dateInfo.setCreated(now); dateInfo.setValue("Registered"); metaMetadata.setDateInfo(dateInfo); StatusOfType statusOf = (StatusOfType) factory.newInstance(Class.forName("org.dlese.adn.StatusOfType")); statusOf.setStatus("Submitted"); statusOf.setValue("Submitted"); metaMetadata.setStatusOf(statusOf); metaMetadata.setLanguage("en"); metaMetadata.setCopyright("No"); metaMetadata.setScheme("No scheme"); TermsOfUseType termsOfUse = (TermsOfUseType) factory .newInstance(Class.forName("org.dlese.adn.TermsOfUseType")); termsOfUse.setValue("Terms of use consistent with GEON policy."); metaMetadata.setTermsOfUse(termsOfUse); // ////////////////////////////////////////////////////////// // // // // technical // // // ///////////////////////////////////////////////////////// TechnicalType technical = (TechnicalType) factory .newInstance(Class.forName("org.dlese.adn.TechnicalType")); OnlineType online = (OnlineType) factory.newInstance(Class.forName("org.dlese.adn.OnlineType")); online.setPrimaryURL("http://www.geongrid.org"); RequirementsType requirements = (RequirementsType) factory .newInstance(Class.forName("org.dlese.adn.RequirementsType")); online.setRequirements(requirements); RequirementType requirement = (RequirementType) factory .newInstance(Class.forName("org.dlese.adn.RequirementType")); requirement.setReqType("DLESE:General:No specific technical requirements"); requirements.getRequirement().add(requirement); technical.setOnline(online); // ////////////////////////////////////////////////////////// // // // // right // // // ///////////////////////////////////////////////////////// RightsType rights = (RightsType) factory.newInstance(Class.forName("org.dlese.adn.RightsType")); rights.setDescription(permission); rights.setCost("DLESE:No"); // ////////////////////////////////////////////////////////// // // // // relation // // // ///////////////////////////////////////////////////////// RelationsType relations = (RelationsType) factory .newInstance(Class.forName("org.dlese.adn.RelationsType")); // ////////////////////////////////////////////////////////// // // // // spatial coverage // // // ///////////////////////////////////////////////////////// GeospatialCoveragesType geospatialCoverages = (GeospatialCoveragesType) factory .newInstance(Class.forName("org.dlese.adn.GeospatialCoveragesType")); GeospatialCoverageType geospatialCoverage = (GeospatialCoverageType) factory .newInstance(Class.forName("org.dlese.adn.GeospatialCoverageType")); BodyType body = (BodyType) factory.newInstance(Class.forName("org.dlese.adn.BodyType")); body.setPlanet("Earth"); geospatialCoverage.setBody(body); geospatialCoverage.setGeodeticDatumGlobalOrHorz(hrizontal); ProjectionType proj = (ProjectionType) factory .newInstance(Class.forName("org.dlese.adn.ProjectionType")); proj.setType(projection); proj.setValue("Some projections here"); geospatialCoverage.setProjection(proj); CoordinateSystemType coord = (CoordinateSystemType) factory .newInstance(Class.forName("org.dlese.adn.CoordinateSystemType")); coord.setType(coordinate); coord.setValue("Some cordinate system here"); geospatialCoverage.setCoordinateSystem(coord); BoundBoxType box = (BoundBoxType) factory.newInstance(Class.forName("org.dlese.adn.BoundBoxType")); box.setBbSrcName("Cataloger supplied"); /* * VertType vert = * (VertType)factory.newInstance(Class.forName("org.dlese.adn.VertType" * )); VertMinMaxType min = * (VertMinMaxType)factory.newInstance(Class * .forName("org.dlese.adn.VertMinMaxType")); * min.setUnits("centimeters (cm)"); min.setValue(new * BigDecimal(min_altitude[0])); * * VertMinMaxType max = * (VertMinMaxType)factory.newInstance(Class.forName * ("org.dlese.adn.VertMinMaxType")); * max.setUnits("centimeters (cm)"); max.setValue(new * BigDecimal(max_altitude[0])); * * vert.setVertMin(min); vert.setVertMax(max); * vert.setGeodeticDatumGlobalOrVert("DLESE:CGD28-CDN"); * vert.setVertBase("Datum level"); * * box.setBbVert(vert); */ geospatialCoverage.setBoundBox(box); // geospatialCoverage.setDetGeos(); geospatialCoverages.getGeospatialCoverage().add(geospatialCoverage); // ////////////////////////////////////////////////////////// // // // // temporal coverage // // // ///////////////////////////////////////////////////////// TemporalCoveragesType temporalCoverages = (TemporalCoveragesType) factory .newInstance(Class.forName("org.dlese.adn.TemporalCoveragesType")); TimeAndPeriodType timeAndPeriod = (TimeAndPeriodType) factory .newInstance(Class.forName("org.dlese.adn.TimeAndPeriodType")); temporalCoverages.getTimeAndPeriod().add(timeAndPeriod); // set time directly into relativeTime TimeInfoType timeInfo = (TimeInfoType) factory.newInstance(Class.forName("org.dlese.adn.TimeInfoType")); timeAndPeriod.setTimeInfo(timeInfo); if (time.equals("notpresent")) { if (geologic_time.equals("other")) { TimeRelativeType timeRelative = (TimeRelativeType) factory .newInstance(Class.forName("org.dlese.adn.TimeRelativeType")); timeInfo.setTimeRelative(timeRelative); RelativeType begin = (RelativeType) factory .newInstance(Class.forName("org.dlese.adn.RelativeType")); timeRelative.setBegin(begin); begin.setValue(new BigDecimal(begin_age)); begin.setUnits("ma"); RelativeType end = (RelativeType) factory .newInstance(Class.forName("org.dlese.adn.RelativeType")); timeRelative.setEnd(end); end.setValue(new BigDecimal(end_age)); end.setUnits("ma"); } else { TimeRelativeType timeRelative = (TimeRelativeType) factory .newInstance(Class.forName("org.dlese.adn.TimeRelativeType")); timeInfo.setTimeRelative(timeRelative); RelativeType begin = (RelativeType) factory .newInstance(Class.forName("org.dlese.adn.RelativeType")); timeRelative.setBegin(begin); begin.setValue(new BigDecimal(0)); begin.setUnits("ma"); RelativeType end = (RelativeType) factory .newInstance(Class.forName("org.dlese.adn.RelativeType")); timeRelative.setEnd(end); end.setValue(new BigDecimal(0)); end.setUnits("ma"); // set time to periods PeriodsType periods = (PeriodsType) factory .newInstance(Class.forName("org.dlese.adn.PeriodsType")); timeAndPeriod.setPeriods(periods); PeriodType period = (PeriodType) factory.newInstance(Class.forName("org.dlese.adn.PeriodType")); periods.getPeriod().add(period); period.setName(geologic_time); period.setSource("USGS-Geologic-Time-Scale"); } } else if (time.equals("present")) { // set time directly into timeAD or timeBC if (time_choice.equals("AD")) { TimeADType timeAD = (TimeADType) factory.newInstance(Class.forName("org.dlese.adn.TimeADType")); timeInfo.setTimeAD(timeAD); Calendar begin = Calendar.getInstance(); begin.clear(); begin.add(Calendar.YEAR, Integer.parseInt(begin_year) - 1970); begin.add(Calendar.MONTH, Integer.parseInt(begin_month) - 1); begin.add(Calendar.DAY_OF_MONTH, Integer.parseInt(begin_day) - 1); Calendar bt = Calendar.getInstance(); bt.clear(); bt.add(Calendar.HOUR, Integer.parseInt(begin_hour)); bt.add(Calendar.MINUTE, Integer.parseInt(begin_min)); bt.add(Calendar.SECOND, Integer.parseInt(begin_sec)); Calendar end = Calendar.getInstance(); end.clear(); end.add(Calendar.YEAR, Integer.parseInt(end_year) - 1970); end.add(Calendar.MONTH, Integer.parseInt(end_month) - 1); end.add(Calendar.DAY_OF_MONTH, Integer.parseInt(end_day) - 1); Calendar et = Calendar.getInstance(); et.clear(); et.add(Calendar.HOUR, Integer.parseInt(end_hour)); et.add(Calendar.MINUTE, Integer.parseInt(end_min)); et.add(Calendar.SECOND, Integer.parseInt(end_sec)); ADType tmp = (ADType) factory.newInstance(Class.forName("org.dlese.adn.ADType")); tmp.setDate(begin); tmp.setTime(bt); tmp.setValue(""); timeAD.setBegin(tmp); tmp = (ADType) factory.newInstance(Class.forName("org.dlese.adn.ADType")); tmp.setDate(end); tmp.setTime(et); tmp.setValue(""); timeAD.setEnd(tmp); } else if (time_choice.equals("BC")) { TimeBCType timeBC = (TimeBCType) factory.newInstance(Class.forName("org.dlese.adn.TimeBCType")); timeInfo.setTimeBC(timeBC); timeBC.setBegin(bc_begin_year); timeBC.setEnd(bc_end_year); } else if (time_choice.equals("direct")) { TimeRelativeType timeRelative = (TimeRelativeType) factory .newInstance(Class.forName("org.dlese.adn.TimeRelativeType")); timeInfo.setTimeRelative(timeRelative); RelativeType begin = (RelativeType) factory .newInstance(Class.forName("org.dlese.adn.RelativeType")); timeRelative.setBegin(begin); begin.setValue(new BigDecimal("-" + d_begin_year)); begin.setUnits("year"); RelativeType end = (RelativeType) factory .newInstance(Class.forName("org.dlese.adn.RelativeType")); timeRelative.setEnd(end); end.setValue(new BigDecimal(d_end_year)); end.setUnits("year"); } } // handle object in space ObjectsInSpaceType objectsInSpace = (ObjectsInSpaceType) factory .newInstance(Class.forName("org.dlese.adn.ObjectsInSpaceType")); itemRecord.setGeneral(general); itemRecord.setLifecycle(lifecycle); itemRecord.setMetaMetadata(metaMetadata); itemRecord.setRights(rights); itemRecord.setTechnical(technical); // itemRecord.setRelations(relations); itemRecord.setGeospatialCoverages(geospatialCoverages); if (!time.equals("any")) { itemRecord.setTemporalCoverages(temporalCoverages); } itemRecord.setObjectsInSpace(objectsInSpace); // marshall JAXBContext jc = JAXBContext.newInstance("org.dlese.adn"); Marshaller m = jc.createMarshaller(); m.setProperty(Marshaller.JAXB_FORMATTED_OUTPUT, Boolean.TRUE); // create and save target // save into a directory File dir = new File("adn/" + uuid); // TODO: remove adn folder once // all the files have been // removed. dir.mkdirs(); dirPath = dir.getAbsolutePath(); // unzip the uploaded file String shpFile = shpURL; String unzipFileName = ""; if (shpFile.trim().startsWith("http://")) { URL shpURL = new URL(shpFile); HttpURLConnection huc = (HttpURLConnection) shpURL.openConnection(); huc.connect(); InputStream in = huc.getInputStream(); File zip = new File(dir, "tmp.zip"); FileOutputStream out = new FileOutputStream(zip); byte[] buffer = new byte[1024]; int count = in.read(buffer); while (count > 0) { out.write(buffer, 0, count); count = in.read(buffer); } huc.disconnect(); out.close(); unzipFileName = unzip(dir, zip); // Unzipping the ftpped file to // dir. zip.delete(); // the zip file is no longer necessary. } else if (shpFile.trim().startsWith("ftp://")) { shpFile = shpFile.substring(6); String username = "anonymous"; String password = "geon@geongrid.org"; int index = shpFile.indexOf("/"); String hostname = shpFile.substring(0, index); String filename = shpFile.substring(index); org.apache.commons.net.ftp.FTPClient f = new org.apache.commons.net.ftp.FTPClient(); f.connect(hostname); f.login(username, password); f.setFileType(FTP.BINARY_FILE_TYPE); File zip = new File(dir, "tmp.zip"); FileOutputStream fos = new FileOutputStream(zip); f.retrieveFile(filename, fos); f.disconnect(); fos.close(); unzipFileName = unzip(dir, zip); // Unzipping the ftpped file to // dir. zip.delete(); // the zip file is no longer necessary. } else { // file is local.. java.io.File zip = new java.io.File(shpFile); unzipFileName = unzip(dir, zip); } if (!unzipFileName.equals("")) { // calculate the binding box and set the adn schema shpfis = new FileInputStream(dirPath + "/" + unzipFileName + ".shp"); Shapefile shape = new Shapefile(shpfis); double[] bounds = shape.getBounds(); box.setWestCoord(new BigDecimal(bounds[0])); box.setNorthCoord(new BigDecimal(bounds[1])); box.setEastCoord(new BigDecimal(bounds[2])); box.setSouthCoord(new BigDecimal(bounds[3])); shpfis.close(); // Object x = (Object) shape; // shape = new Shapefile(); /* * File shp = new File(dir, unzipFileName + ".shp"); File shx = * new File(dir, unzipFileName + ".shx"); File dbf = new * File(dir, unzipFileName + ".dbf"); * * * shp.delete(); shx.delete(); dbf.delete(); //dir.delete(); */ } /* * // calculate the schema and ask for more explanation DBase db = * new DBase(dirName); db.openTable(fileName); String [] columns = * db.getColumnNames(); ArrayList list = new ArrayList(); for (int * i=0; i<columns.length; i++) { list.add(columns[i]); } */// save its metadata File adn = new File(dir, uuid + ".adn"); FileOutputStream fos = new FileOutputStream(adn); m.marshal(itemRecord, fos); fos.close(); /* * } catch (Exception e) { * * try { PrintWriter pw = new PrintWriter(new * FileWriter("/home/jaeger/log.txt", true)); e.printStackTrace(pw); * pw.flush(); } catch (Exception ex) {} * * throw new JspException(e.getMessage()); } return SKIP_BODY; } * * * * private String label(String string) { return * "<table width=90% cellpadding=1 cellspacing=0 border=0>\n"+ * "<tr><td bgcolor=Gainsboro>\n"+ * "<font face=\"arial,sans-serif\" size=-1 color=#777777>\n"+ * " <b>"+string+"</b>\n"+ "</font>\n"+ "</td></tr>\n"+ * "</table>\n"; } * * * private String message(String key, String val) { return * " <tr>\n" + * " <td align=right width=150><div class=label><b>" * +key+":</b></div></td>\n" + * " <td align=left>"+val+"</td>\n" + " </tr>\n"; } * * * private String messagePadding(String key, String val) { return * " <tr>\n" + * " <td align=right width=150><div class=label> " * +key+":</div></td>\n" + " <td align=left>"+val+"</td>\n" + * " </tr>\n"; } */ return adn.getAbsolutePath(); } catch (ClassNotFoundException cnfex) { cnfex.printStackTrace(); _deleteFiles(); } catch (JAXBException jex) { jex.printStackTrace(); _deleteFiles(); } catch (FileNotFoundException fnex) { fnex.printStackTrace(); _deleteFiles(); } catch (IOException ioex) { ioex.printStackTrace(); _deleteFiles(); } catch (ShapefileException shex) { shex.printStackTrace(); _deleteFiles(); } catch (Exception ex) { ex.printStackTrace(); _deleteFiles(); } return ""; }
From source file:org.gitools.datasources.obo.OBOStream.java
public OBOStream(URL baseUrl) throws IOException { this.baseUrl = baseUrl; // Workaround for FTP problem connecting ftp.geneontology.org with URL.openStream() if (baseUrl.getProtocol().equalsIgnoreCase("ftp")) { FTPClient ftp = new FTPClient(); if (baseUrl.getPort() != -1) { ftp.connect(baseUrl.getHost(), baseUrl.getPort()); } else {/*from w w w .ja va2s . c om*/ ftp.connect(baseUrl.getHost()); } ftp.login("anonymous", ""); ftp.enterLocalPassiveMode(); ftp.setControlKeepAliveTimeout(60); InputStream is = ftp.retrieveFileStream(baseUrl.getPath()); this.reader = new BufferedReader(new InputStreamReader(is)); } else { this.reader = new BufferedReader(new InputStreamReader(baseUrl.openStream())); } this.linePos = 0; }