List of usage examples for org.apache.hadoop.conf Configured subclass-usage
From source file Brush.CountReads.java
public class CountReads extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(CountReads.class); // CountReadsMapper ///////////////////////////////////////////////////////////////////////////
From source file Brush.CutChimericLinks.java
public class CutChimericLinks extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(CutChimericLinks.class); //\\\\\\\\\\\\\\\\\\\\\\\\\\\ String comparsion public static float fastcomparsion(String word1, String word2) { float result = 0;
From source file Brush.CutRepeatBoundary.java
public class CutRepeatBoundary extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(CutRepeatBoundary.class); // CutRepeatBoundaryMapper ///////////////////////////////////////////////////////////////////////////
From source file Brush.DefineConsensus.java
public class DefineConsensus extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(DefineConsensus.class); // DefineConsensusMapper ///////////////////////////////////////////////////////////////////////////
From source file Brush.EdgeRemoval.java
public class EdgeRemoval extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(PopBubbles.class); // PopBubblesMapper ///////////////////////////////////////////////////////////////////////////
From source file Brush.FindBubbles.java
public class FindBubbles extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(FindBubbles.class); public static int _min2(int a, int b) { return (a < b) ? a : b; }
From source file Brush.GenNonContainedReads.java
public class GenNonContainedReads extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(MatchPrefix.class); public static class GenNonContainedReadsMapper extends MapReduceBase implements Mapper<LongWritable, Text, Text, Text> { public static int K = 21;
From source file Brush.GenReverseEdge.java
public class GenReverseEdge extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(GenReverseEdge.class); // GenReverseEdgeMapper ///////////////////////////////////////////////////////////////////////////
From source file Brush.Graph2Fasta.java
public class Graph2Fasta extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(Graph2Fasta.class); // Graph2FastaMapper ///////////////////////////////////////////////////////////////////////////
From source file Brush.Graph2Sfa.java
public class Graph2Sfa extends Configured implements Tool { private static final Logger sLogger = Logger.getLogger(Graph2Sfa.class); // Graph2SfaMapper ///////////////////////////////////////////////////////////////////////////