List of usage examples for org.apache.hadoop.io DataOutputBuffer getLength
public int getLength()
From source file:com.inforefiner.hdata.SubmitClient.java
License:Apache License
/** * Main run function for the client//from w w w.ja va2 s .co m * * @return true if application completed successfully * @throws IOException * @throws YarnException */ public boolean run() throws IOException, YarnException { LOG.info("Running Client"); yarnClient.start(); YarnClusterMetrics clusterMetrics = yarnClient.getYarnClusterMetrics(); LOG.info("Got Cluster metric info from ASM" + ", numNodeManagers=" + clusterMetrics.getNumNodeManagers()); List<NodeReport> clusterNodeReports = yarnClient.getNodeReports(NodeState.RUNNING); LOG.info("Got Cluster node info from ASM"); for (NodeReport node : clusterNodeReports) { LOG.info("Got node report from ASM for" + ", nodeId=" + node.getNodeId() + ", nodeAddress" + node.getHttpAddress() + ", nodeRackName" + node.getRackName() + ", nodeNumContainers" + node.getNumContainers()); } QueueInfo queueInfo = yarnClient.getQueueInfo(this.amQueue); LOG.info("Queue info" + ", queueName=" + queueInfo.getQueueName() + ", queueCurrentCapacity=" + queueInfo.getCurrentCapacity() + ", queueMaxCapacity=" + queueInfo.getMaximumCapacity() + ", queueApplicationCount=" + queueInfo.getApplications().size() + ", queueChildQueueCount=" + queueInfo.getChildQueues().size()); List<QueueUserACLInfo> listAclInfo = yarnClient.getQueueAclsInfo(); for (QueueUserACLInfo aclInfo : listAclInfo) { for (QueueACL userAcl : aclInfo.getUserAcls()) { LOG.info("User ACL Info for Queue" + ", queueName=" + aclInfo.getQueueName() + ", userAcl=" + userAcl.name()); } } if (domainId != null && domainId.length() > 0 && toCreateDomain) { prepareTimelineDomain(); } // Get a new application id YarnClientApplication app = yarnClient.createApplication(); GetNewApplicationResponse appResponse = app.getNewApplicationResponse(); // TODO get min/max resource capabilities from RM and change memory ask if needed // If we do not have min/max, we may not be able to correctly request // the required resources from the RM for the app master // Memory ask has to be a multiple of min and less than max. // Dump out information about cluster capability as seen by the resource manager int maxMem = appResponse.getMaximumResourceCapability().getMemory(); LOG.info("Max mem capabililty of resources in this cluster " + maxMem); // A resource ask cannot exceed the max. if (amMemory > maxMem) { LOG.info("AM memory specified above max threshold of cluster. Using max value." + ", specified=" + amMemory + ", max=" + maxMem); amMemory = maxMem; } int maxVCores = appResponse.getMaximumResourceCapability().getVirtualCores(); LOG.info("Max virtual cores capabililty of resources in this cluster " + maxVCores); if (amVCores > maxVCores) { LOG.info("AM virtual cores specified above max threshold of cluster. " + "Using max value." + ", specified=" + amVCores + ", max=" + maxVCores); amVCores = maxVCores; } // set the application name ApplicationSubmissionContext appContext = app.getApplicationSubmissionContext(); ApplicationId appId = appContext.getApplicationId(); appContext.setKeepContainersAcrossApplicationAttempts(keepContainers); appContext.setApplicationName(appName); if (attemptFailuresValidityInterval >= 0) { appContext.setAttemptFailuresValidityInterval(attemptFailuresValidityInterval); } // set local resources for the application master // local files or archives as needed // In this scenario, the jar file for the application master is part of the local resources Map<String, LocalResource> localResources = new HashMap<String, LocalResource>(); LOG.info("Copy App Master jar from local filesystem and add to local environment"); // Copy the application master jar to the filesystem // Create a local resource to point to the destination jar path FileSystem fs = FileSystem.get(conf); addToLocalResources(fs, appMasterJar, appMasterJarPath, appId.toString(), localResources, null); // Set the log4j properties if needed if (!log4jPropFile.isEmpty()) { addToLocalResources(fs, log4jPropFile, log4jPath, appId.toString(), localResources, null); } // The shell script has to be made available on the final container(s) // where it will be executed. // To do this, we need to first copy into the filesystem that is visible // to the yarn framework. // We do not need to set this as a local resource for the application // master as the application master does not need it. String hdfsShellScriptLocation = ""; long hdfsShellScriptLen = 0; long hdfsShellScriptTimestamp = 0; if (!shellScriptPath.isEmpty()) { Path shellSrc = new Path(shellScriptPath); String shellPathSuffix = appName + "/" + appId.toString() + "/" + SCRIPT_PATH; Path shellDst = new Path(fs.getHomeDirectory(), shellPathSuffix); fs.copyFromLocalFile(false, true, shellSrc, shellDst); hdfsShellScriptLocation = shellDst.toUri().toString(); FileStatus shellFileStatus = fs.getFileStatus(shellDst); hdfsShellScriptLen = shellFileStatus.getLen(); hdfsShellScriptTimestamp = shellFileStatus.getModificationTime(); } if (!shellCommand.isEmpty()) { addToLocalResources(fs, null, shellCommandPath, appId.toString(), localResources, shellCommand); } if (shellArgs.length > 0) { addToLocalResources(fs, null, shellArgsPath, appId.toString(), localResources, StringUtils.join(shellArgs, " ")); } // Set the necessary security tokens as needed //amContainer.setContainerTokens(containerToken); // Set the env variables to be setup in the env where the application master will be run LOG.info("Set the environment for the application master"); Map<String, String> env = new HashMap<String, String>(); // put location of shell script into env // using the env info, the application master will create the correct local resource for the // eventual containers that will be launched to execute the shell scripts env.put(DSConstants.DISTRIBUTEDSHELLSCRIPTLOCATION, hdfsShellScriptLocation); env.put(DSConstants.DISTRIBUTEDSHELLSCRIPTTIMESTAMP, Long.toString(hdfsShellScriptTimestamp)); env.put(DSConstants.DISTRIBUTEDSHELLSCRIPTLEN, Long.toString(hdfsShellScriptLen)); if (domainId != null && domainId.length() > 0) { env.put(DSConstants.DISTRIBUTEDSHELLTIMELINEDOMAIN, domainId); } // Add AppMaster.jar location to classpath // At some point we should not be required to add // the hadoop specific classpaths to the env. // It should be provided out of the box. // For now setting all required classpaths including // the classpath to "." for the application jar StringBuilder classPathEnv = new StringBuilder(Environment.CLASSPATH.$$()) .append(ApplicationConstants.CLASS_PATH_SEPARATOR).append("./*"); for (String c : conf.getStrings(YarnConfiguration.YARN_APPLICATION_CLASSPATH, YarnConfiguration.DEFAULT_YARN_CROSS_PLATFORM_APPLICATION_CLASSPATH)) { classPathEnv.append(ApplicationConstants.CLASS_PATH_SEPARATOR); classPathEnv.append(c.trim()); } classPathEnv.append(ApplicationConstants.CLASS_PATH_SEPARATOR).append("./log4j.properties"); // add the runtime classpath needed for tests to work if (conf.getBoolean(YarnConfiguration.IS_MINI_YARN_CLUSTER, false)) { classPathEnv.append(':'); classPathEnv.append(System.getProperty("java.class.path")); } env.put("CLASSPATH", classPathEnv.toString()); // Set the necessary command to execute the application master Vector<CharSequence> vargs = new Vector<CharSequence>(30); // Set java executable command LOG.info("Setting up app master command"); vargs.add(Environment.JAVA_HOME.$$() + "/bin/java"); // Set Xmx based on am memory size vargs.add("-Xmx" + amMemory + "m"); // Set class name vargs.add(appMasterMainClass); // Set params for Application Master vargs.add("--container_memory " + String.valueOf(containerMemory)); vargs.add("--container_vcores " + String.valueOf(containerVirtualCores)); vargs.add("--num_containers " + String.valueOf(numContainers)); if (null != nodeLabelExpression) { appContext.setNodeLabelExpression(nodeLabelExpression); } vargs.add("--priority " + String.valueOf(shellCmdPriority)); for (Map.Entry<String, String> entry : shellEnv.entrySet()) { vargs.add("--shell_env " + entry.getKey() + "=" + entry.getValue()); } if (debugFlag) { vargs.add("--debug"); } vargs.add("1>" + ApplicationConstants.LOG_DIR_EXPANSION_VAR + "/AppMaster.stdout"); vargs.add("2>" + ApplicationConstants.LOG_DIR_EXPANSION_VAR + "/AppMaster.stderr"); // Get final commmand StringBuilder command = new StringBuilder(); for (CharSequence str : vargs) { command.append(str).append(" "); } LOG.info("Completed setting up app master command " + command.toString()); List<String> commands = new ArrayList<String>(); commands.add(command.toString()); // Set up the container launch context for the application master ContainerLaunchContext amContainer = ContainerLaunchContext.newInstance(localResources, env, commands, null, null, null); // Set up resource type requirements // For now, both memory and vcores are supported, so we set memory and // vcores requirements Resource capability = Resource.newInstance(amMemory, amVCores); appContext.setResource(capability); // Service data is a binary blob that can be passed to the application // Not needed in this scenario // amContainer.setServiceData(serviceData); // Setup security tokens if (UserGroupInformation.isSecurityEnabled()) { // Note: Credentials class is marked as LimitedPrivate for HDFS and MapReduce Credentials credentials = new Credentials(); String tokenRenewer = conf.get(YarnConfiguration.RM_PRINCIPAL); if (tokenRenewer == null || tokenRenewer.length() == 0) { throw new IOException("Can't get Master Kerberos principal for the RM to use as renewer"); } // For now, only getting tokens for the default file-system. final Token<?> tokens[] = fs.addDelegationTokens(tokenRenewer, credentials); if (tokens != null) { for (Token<?> token : tokens) { LOG.info("Got dt for " + fs.getUri() + "; " + token); } } DataOutputBuffer dob = new DataOutputBuffer(); credentials.writeTokenStorageToStream(dob); ByteBuffer fsTokens = ByteBuffer.wrap(dob.getData(), 0, dob.getLength()); amContainer.setTokens(fsTokens); } appContext.setAMContainerSpec(amContainer); // Set the priority for the application master // TODO - what is the range for priority? how to decide? Priority pri = Priority.newInstance(amPriority); appContext.setPriority(pri); // Set the queue to which this application is to be submitted in the RM appContext.setQueue(amQueue); // Submit the application to the applications manager // SubmitApplicationResponse submitResp = applicationsManager.submitApplication(appRequest); // Ignore the response as either a valid response object is returned on success // or an exception thrown to denote some form of a failure LOG.info("Submitting application to ASM"); yarnClient.submitApplication(appContext); // TODO // Try submitting the same request again // app submission failure? Thread t = new Thread(new LogReceiver()); t.start(); // Monitor the application return monitorApplication(appId); }
From source file:com.mellanox.hadoop.mapred.UdaShuffleHandler.java
License:Apache License
public static ByteBuffer serializeServiceData(Token<JobTokenIdentifier> jobToken) throws IOException { //TODO these bytes should be versioned DataOutputBuffer jobToken_dob = new DataOutputBuffer(); jobToken.write(jobToken_dob);// w ww . j a v a2 s .co m return ByteBuffer.wrap(jobToken_dob.getData(), 0, jobToken_dob.getLength()); }
From source file:com.mongodb.hadoop.io.BSONWritable.java
License:Apache License
/** * Used by child copy constructors./*from w w w . ja v a 2 s . c o m*/ */ protected synchronized void copy(final Writable other) { if (other != null) { try { DataOutputBuffer out = new DataOutputBuffer(); other.write(out); DataInputBuffer in = new DataInputBuffer(); in.reset(out.getData(), out.getLength()); readFields(in); } catch (IOException e) { throw new IllegalArgumentException("map cannot be copied: " + e.getMessage()); } } else { throw new IllegalArgumentException("source map cannot be null"); } }
From source file:com.netflix.suro.input.thrift.MessageSetSerDe.java
License:Apache License
@Override public byte[] serialize(TMessageSet payload) { DataOutputBuffer outBuffer = new DataOutputBuffer(); try {/*from www .j av a 2 s. co m*/ outBuffer.reset(); outBuffer.writeUTF(payload.getApp()); outBuffer.writeInt(payload.getNumMessages()); outBuffer.writeByte(payload.getCompression()); outBuffer.writeLong(payload.getCrc()); outBuffer.writeInt(payload.getMessages().length); outBuffer.write(payload.getMessages()); return ByteBuffer.wrap(outBuffer.getData(), 0, outBuffer.getLength()).array(); } catch (Exception e) { throw new RuntimeException("Failed to serialize TMessageSet: " + e.getMessage(), e); } finally { Closeables.closeQuietly(outBuffer); } }
From source file:com.scistor.dshell.ScistorApplicationMaster.java
License:Apache License
/** * Main run function for the application master * //from w ww.j a va 2s . c om * @throws YarnException * @throws IOException */ @SuppressWarnings({ "unchecked" }) public void run() throws YarnException, IOException { LOG.info("Starting ApplicationMaster"); try { publishApplicationAttemptEvent(timelineClient, appAttemptID.toString(), DSEvent.DS_APP_ATTEMPT_START); } catch (Exception e) { LOG.error("App Attempt start event coud not be pulished for " + appAttemptID.toString(), e); } Credentials credentials = UserGroupInformation.getCurrentUser().getCredentials(); DataOutputBuffer dob = new DataOutputBuffer(); credentials.writeTokenStorageToStream(dob); // Now remove the AM->RM token so that containers cannot access it. Iterator<Token<?>> iter = credentials.getAllTokens().iterator(); LOG.info("Executing with tokens:"); while (iter.hasNext()) { Token<?> token = iter.next(); LOG.info(token); if (token.getKind().equals(AMRMTokenIdentifier.KIND_NAME)) { iter.remove(); } } allTokens = ByteBuffer.wrap(dob.getData(), 0, dob.getLength()); // Create appSubmitterUgi and add original tokens to it String appSubmitterUserName = System.getenv(ApplicationConstants.Environment.USER.name()); appSubmitterUgi = UserGroupInformation.createRemoteUser(appSubmitterUserName); appSubmitterUgi.addCredentials(credentials); AMRMClientAsync.CallbackHandler allocListener = new RMCallbackHandler(); amRMClient = AMRMClientAsync.createAMRMClientAsync(1000, allocListener); amRMClient.init(conf); amRMClient.start(); containerListener = createNMCallbackHandler(); nmClientAsync = new NMClientAsyncImpl(containerListener); nmClientAsync.init(conf); nmClientAsync.start(); // Setup local RPC Server to accept status requests directly from // clients // TODO need to setup a protocol for client to be able to communicate to // the RPC server // TODO use the rpc port info to register with the RM for the client to // send requests to this app master // Register self with ResourceManager // This will start heartbeating to the RM appMasterHostname = NetUtils.getHostname(); RegisterApplicationMasterResponse response = amRMClient.registerApplicationMaster(appMasterHostname, appMasterRpcPort, appMasterTrackingUrl); // Dump out information about cluster capability as seen by the // resource manager int maxMem = response.getMaximumResourceCapability().getMemory(); LOG.info("Max mem capabililty of resources in this cluster " + maxMem); int maxVCores = response.getMaximumResourceCapability().getVirtualCores(); LOG.info("Max vcores capabililty of resources in this cluster " + maxVCores); // A resource ask cannot exceed the max. if (containerMemory > maxMem) { LOG.info("Container memory specified above max threshold of cluster." + " Using max value." + ", specified=" + containerMemory + ", max=" + maxMem); containerMemory = maxMem; } if (containerVirtualCores > maxVCores) { LOG.info("Container virtual cores specified above max threshold of cluster." + " Using max value." + ", specified=" + containerVirtualCores + ", max=" + maxVCores); containerVirtualCores = maxVCores; } List<Container> previousAMRunningContainers = response.getContainersFromPreviousAttempts(); LOG.info("Received " + previousAMRunningContainers.size() + " previous AM's running containers on AM registration."); numAllocatedContainers.addAndGet(previousAMRunningContainers.size()); int numTotalContainersToRequest = numTotalContainers - previousAMRunningContainers.size(); // Setup ask for containers from RM // Send request for containers to RM // Until we get our fully allocated quota, we keep on polling RM for // containers // Keep looping until all the containers are launched and shell script // executed on them ( regardless of success/failure). for (int i = 0; i < numTotalContainersToRequest; ++i) { ContainerRequest containerAsk = setupContainerAskForRM(); amRMClient.addContainerRequest(containerAsk); } numRequestedContainers.set(numTotalContainersToRequest); try { publishApplicationAttemptEvent(timelineClient, appAttemptID.toString(), DSEvent.DS_APP_ATTEMPT_END); } catch (Exception e) { LOG.error("App Attempt start event coud not be pulished for " + appAttemptID.toString(), e); } }
From source file:com.scistor.dshell.ScistorClient.java
License:Apache License
/** * Main run function for the client//w w w.j ava 2 s. co m * * @return true if application completed successfully * @throws IOException * @throws YarnException */ public boolean run() throws IOException, YarnException { LOG.info("Running Client"); yarnClient.start(); YarnClusterMetrics clusterMetrics = yarnClient.getYarnClusterMetrics(); LOG.info("Got Cluster metric info from ASM" + ", numNodeManagers=" + clusterMetrics.getNumNodeManagers()); List<NodeReport> clusterNodeReports = yarnClient.getNodeReports(NodeState.RUNNING); LOG.info("Got Cluster node info from ASM"); for (NodeReport node : clusterNodeReports) { LOG.info("Got node report from ASM for" + ", nodeId=" + node.getNodeId() + ", nodeAddress" + node.getHttpAddress() + ", nodeRackName" + node.getRackName() + ", nodeNumContainers" + node.getNumContainers()); } QueueInfo queueInfo = yarnClient.getQueueInfo(this.amQueue); LOG.info("Queue info" + ", queueName=" + queueInfo.getQueueName() + ", queueCurrentCapacity=" + queueInfo.getCurrentCapacity() + ", queueMaxCapacity=" + queueInfo.getMaximumCapacity() + ", queueApplicationCount=" + queueInfo.getApplications().size() + ", queueChildQueueCount=" + queueInfo.getChildQueues().size()); List<QueueUserACLInfo> listAclInfo = yarnClient.getQueueAclsInfo(); for (QueueUserACLInfo aclInfo : listAclInfo) { for (QueueACL userAcl : aclInfo.getUserAcls()) { LOG.info("User ACL Info for Queue" + ", queueName=" + aclInfo.getQueueName() + ", userAcl=" + userAcl.name()); } } // Get a new application id YarnClientApplication app = yarnClient.createApplication(); GetNewApplicationResponse appResponse = app.getNewApplicationResponse(); // TODO get min/max resource capabilities from RM and change memory ask // if needed // If we do not have min/max, we may not be able to correctly request // the required resources from the RM for the app master // Memory ask has to be a multiple of min and less than max. // Dump out information about cluster capability as seen by the resource // manager int maxMem = appResponse.getMaximumResourceCapability().getMemory(); LOG.info("Max mem capabililty of resources in this cluster " + maxMem); // A resource ask cannot exceed the max. if (amMemory > maxMem) { LOG.info("AM memory specified above max threshold of cluster. Using max value." + ", specified=" + amMemory + ", max=" + maxMem); amMemory = maxMem; } int maxVCores = appResponse.getMaximumResourceCapability().getVirtualCores(); LOG.info("Max virtual cores capabililty of resources in this cluster " + maxVCores); if (amVCores > maxVCores) { LOG.info("AM virtual cores specified above max threshold of cluster. " + "Using max value." + ", specified=" + amVCores + ", max=" + maxVCores); amVCores = maxVCores; } // set the application name ApplicationSubmissionContext appContext = app.getApplicationSubmissionContext(); ApplicationId appId = appContext.getApplicationId(); appContext.setKeepContainersAcrossApplicationAttempts(keepContainers); appContext.setApplicationName(appName); // Set up the container launch context for the application master ContainerLaunchContext amContainer = Records.newRecord(ContainerLaunchContext.class); // set local resources for the application master // local files or archives as needed // In this scenario, the jar file for the application master is part of // the local resources Map<String, LocalResource> localResources = new HashMap<String, LocalResource>(); LOG.info("Copy App Master jar from local filesystem and add to local environment"); // Copy the application master jar to the filesystem // Create a local resource to point to the destination jar path FileSystem fs = FileSystem.get(conf); addToLocalResources(fs, appMasterJar, appMasterJarPath, appId.toString(), localResources, null); // Set the log4j properties if needed if (!log4jPropFile.isEmpty()) { addToLocalResources(fs, log4jPropFile, log4jPath, appId.toString(), localResources, null); } // The shell script has to be made available on the final container(s) // where it will be executed. // To do this, we need to first copy into the filesystem that is visible // to the yarn framework. // We do not need to set this as a local resource for the application // master as the application master does not need it. String hdfsShellScriptLocation = ""; long hdfsShellScriptLen = 0; long hdfsShellScriptTimestamp = 0; if (!shellScriptPath.isEmpty()) { Path shellSrc = new Path(shellScriptPath); String shellPathSuffix = appName + "/" + appId.toString() + "/" + SCRIPT_PATH; Path shellDst = new Path(fs.getHomeDirectory(), shellPathSuffix); fs.copyFromLocalFile(false, true, shellSrc, shellDst); hdfsShellScriptLocation = shellDst.toUri().toString(); FileStatus shellFileStatus = fs.getFileStatus(shellDst); hdfsShellScriptLen = shellFileStatus.getLen(); hdfsShellScriptTimestamp = shellFileStatus.getModificationTime(); } if (!shellCommand.isEmpty()) { addToLocalResources(fs, null, shellCommandPath, appId.toString(), localResources, shellCommand); } if (shellArgs.length > 0) { addToLocalResources(fs, null, shellArgsPath, appId.toString(), localResources, StringUtils.join(shellArgs, " ")); } // Set local resource info into app master container launch context amContainer.setLocalResources(localResources); // Set the necessary security tokens as needed // amContainer.setContainerTokens(containerToken); // Set the env variables to be setup in the env where the application // master will be run LOG.info("Set the environment for the application master"); Map<String, String> env = new HashMap<String, String>(); // put location of shell script into env // using the env info, the application master will create the correct // local resource for the // eventual containers that will be launched to execute the shell // scripts env.put(ScistorDSConstants.DISTRIBUTEDSHELLSCRIPTLOCATION, hdfsShellScriptLocation); env.put(ScistorDSConstants.DISTRIBUTEDSHELLSCRIPTTIMESTAMP, Long.toString(hdfsShellScriptTimestamp)); env.put(ScistorDSConstants.DISTRIBUTEDSHELLSCRIPTLEN, Long.toString(hdfsShellScriptLen)); // ========================================jar? if (containerJarPaths.length != 0) { for (int i = 0; i < containerJarPaths.length; i++) { String hdfsJarLocation = ""; String[] jarNameSplit = containerJarPaths[i].split("/"); String jarName = jarNameSplit[jarNameSplit.length - 1]; long hdfsJarLen = 0; long hdfsJarTimestamp = 0; if (!containerJarPaths[i].isEmpty()) { Path jarSrc = new Path(containerJarPaths[i]); String jarPathSuffix = appName + "/" + appId.toString() + "/" + jarName; Path jarDst = new Path(fs.getHomeDirectory(), jarPathSuffix); fs.copyFromLocalFile(false, true, jarSrc, jarDst); hdfsJarLocation = jarDst.toUri().toString(); FileStatus jarFileStatus = fs.getFileStatus(jarDst); hdfsJarLen = jarFileStatus.getLen(); hdfsJarTimestamp = jarFileStatus.getModificationTime(); env.put(ScistorDSConstants.DISTRIBUTEDJARLOCATION + i, hdfsJarLocation); env.put(ScistorDSConstants.DISTRIBUTEDJARTIMESTAMP + i, Long.toString(hdfsJarTimestamp)); env.put(ScistorDSConstants.DISTRIBUTEDJARLEN + i, Long.toString(hdfsJarLen)); } } } // ========================================jar? // Add AppMaster.jar location to classpath // At some point we should not be required to add // the hadoop specific classpaths to the env. // It should be provided out of the box. // For now setting all required classpaths including // the classpath to "." for the application jar StringBuilder classPathEnv = new StringBuilder(Environment.CLASSPATH.$$()) .append(ApplicationConstants.CLASS_PATH_SEPARATOR).append("./*"); for (String c : conf.getStrings(YarnConfiguration.YARN_APPLICATION_CLASSPATH, YarnConfiguration.DEFAULT_YARN_CROSS_PLATFORM_APPLICATION_CLASSPATH)) { classPathEnv.append(ApplicationConstants.CLASS_PATH_SEPARATOR); classPathEnv.append(c.trim()); } classPathEnv.append(ApplicationConstants.CLASS_PATH_SEPARATOR).append("./log4j.properties"); // add the runtime classpath needed for tests to work if (conf.getBoolean(YarnConfiguration.IS_MINI_YARN_CLUSTER, false)) { classPathEnv.append(':'); classPathEnv.append(System.getProperty("java.class.path")); } env.put("CLASSPATH", classPathEnv.toString()); amContainer.setEnvironment(env); // Set the necessary command to execute the application master Vector<CharSequence> vargs = new Vector<CharSequence>(30); // Set java executable command LOG.info("Setting up app master command"); vargs.add(Environment.JAVA_HOME.$$() + "/bin/java"); // Set Xmx based on am memory size vargs.add("-Xmx" + amMemory + "m"); // Set class name vargs.add(appMasterMainClass); // Set params for Application Master vargs.add("--container_memory " + String.valueOf(containerMemory)); vargs.add("--container_vcores " + String.valueOf(containerVirtualCores)); vargs.add("--num_containers " + String.valueOf(numContainers)); vargs.add("--priority " + String.valueOf(shellCmdPriority)); for (Map.Entry<String, String> entry : shellEnv.entrySet()) { vargs.add("--shell_env " + entry.getKey() + "=" + entry.getValue()); } if (debugFlag) { vargs.add("--debug"); } vargs.add("1>" + ApplicationConstants.LOG_DIR_EXPANSION_VAR + "/AppMaster.stdout"); vargs.add("2>" + ApplicationConstants.LOG_DIR_EXPANSION_VAR + "/AppMaster.stderr"); // Get final commmand StringBuilder command = new StringBuilder(); for (CharSequence str : vargs) { command.append(str).append(" "); } LOG.info("Completed setting up app master command " + command.toString()); List<String> commands = new ArrayList<String>(); commands.add(command.toString()); amContainer.setCommands(commands); // Set up resource type requirements // For now, both memory and vcores are supported, so we set memory and // vcores requirements Resource capability = Records.newRecord(Resource.class); capability.setMemory(amMemory); capability.setVirtualCores(amVCores); appContext.setResource(capability); // Service data is a binary blob that can be passed to the application // Not needed in this scenario // amContainer.setServiceData(serviceData); // Setup security tokens if (UserGroupInformation.isSecurityEnabled()) { Credentials credentials = new Credentials(); String tokenRenewer = conf.get(YarnConfiguration.RM_PRINCIPAL); if (tokenRenewer == null || tokenRenewer.length() == 0) { throw new IOException("Can't get Master Kerberos principal for the RM to use as renewer"); } // For now, only getting tokens for the default file-system. final Token<?> tokens[] = fs.addDelegationTokens(tokenRenewer, credentials); if (tokens != null) { for (Token<?> token : tokens) { LOG.info("Got dt for " + fs.getUri() + "; " + token); } } DataOutputBuffer dob = new DataOutputBuffer(); credentials.writeTokenStorageToStream(dob); ByteBuffer fsTokens = ByteBuffer.wrap(dob.getData(), 0, dob.getLength()); amContainer.setTokens(fsTokens); } appContext.setAMContainerSpec(amContainer); // Set the priority for the application master Priority pri = Records.newRecord(Priority.class); // TODO - what is the range for priority? how to decide? pri.setPriority(amPriority); appContext.setPriority(pri); // Set the queue to which this application is to be submitted in the RM appContext.setQueue(amQueue); // Submit the application to the applications manager // SubmitApplicationResponse submitResp = // applicationsManager.submitApplication(appRequest); // Ignore the response as either a valid response object is returned on // success // or an exception thrown to denote some form of a failure LOG.info("Submitting application to ASM"); yarnClient.submitApplication(appContext); // TODO // Try submitting the same request again // app submission failure? // Monitor the application return monitorApplication(appId); }
From source file:com.sequoiadb.hadoop.io.BSONWritable.java
License:Apache License
protected synchronized void copy(Writable other) { if (other != null) { try {/*from www.ja v a2s .co m*/ DataOutputBuffer out = new DataOutputBuffer(); other.write(out); DataInputBuffer in = new DataInputBuffer(); in.reset(out.getData(), out.getLength()); readFields(in); } catch (IOException e) { throw new IllegalArgumentException("map cannot be copied: " + e.getMessage()); } } else { throw new IllegalArgumentException("source map cannot be null"); } }
From source file:com.sogou.dockeronyarn.client.DockerApplicationMaster_23.java
License:Apache License
/** * Main run function for the application master * * @throws YarnException//from w w w . j a v a 2 s. c om * @throws IOException */ @SuppressWarnings({ "unchecked" }) public boolean run() throws YarnException, IOException { LOG.info("Starting ApplicationMaster"); Credentials credentials = UserGroupInformation.getCurrentUser().getCredentials(); DataOutputBuffer dob = new DataOutputBuffer(); credentials.writeTokenStorageToStream(dob); // Now remove the AM->RM token so that containers cannot access it. Iterator<Token<?>> iter = credentials.getAllTokens().iterator(); while (iter.hasNext()) { Token<?> token = iter.next(); if (token.getKind().equals(AMRMTokenIdentifier.KIND_NAME)) { iter.remove(); } } allTokens = ByteBuffer.wrap(dob.getData(), 0, dob.getLength()); AMRMClientAsync.CallbackHandler allocListener = new RMCallbackHandler(); amRMClient = AMRMClientAsync.createAMRMClientAsync(1000, allocListener); amRMClient.init(conf); amRMClient.start(); containerListener = createNMCallbackHandler(); nmClientAsync = new NMClientAsyncImpl(containerListener); nmClientAsync.init(conf); nmClientAsync.start(); // Setup local RPC Server to accept status requests directly from clients // TODO need to setup a protocol for client to be able to communicate to // the RPC server // TODO use the rpc port info to register with the RM for the client to // send requests to this app master // Register self with ResourceManager // This will start heartbeating to the RM appMasterHostname = NetUtils.getHostname(); RegisterApplicationMasterResponse response = amRMClient.registerApplicationMaster(appMasterHostname, appMasterRpcPort, appMasterTrackingUrl); // Dump out information about cluster capability as seen by the // resource manager int maxMem = response.getMaximumResourceCapability().getMemory(); LOG.info("Max mem capabililty of resources in this cluster " + maxMem); int maxVCores = response.getMaximumResourceCapability().getVirtualCores(); LOG.info("Max vcores capabililty of resources in this cluster " + maxVCores); // A resource ask cannot exceed the max. if (containerMemory > maxMem) { LOG.info("Container memory specified above max threshold of cluster." + " Using max value." + ", specified=" + containerMemory + ", max=" + maxMem); containerMemory = maxMem; } if (containerVirtualCores > maxVCores) { LOG.info("Container virtual cores specified above max threshold of cluster." + " Using max value." + ", specified=" + containerVirtualCores + ", max=" + maxVCores); containerVirtualCores = maxVCores; } // Setup ask for containers from RM // Send request for containers to RM // Until we get our fully allocated quota, we keep on polling RM for // containers // Keep looping until all the containers are launched and shell script // executed on them ( regardless of success/failure). for (int i = 0; i < numTotalContainers; ++i) { ContainerRequest containerAsk = setupContainerAskForRM(); amRMClient.addContainerRequest(containerAsk); } //numRequestedContainers.set(numTotalContainers); while (!done && (numCompletedContainers.get() != numTotalContainers)) { try { Thread.sleep(200); } catch (InterruptedException ex) { } } finish(); return success; }
From source file:com.sogou.dockeronyarn.client.DockerClient.java
License:Apache License
/** * Main run function for the client// w ww . j av a2s.co m * @return true if application completed successfully * @throws IOException * @throws YarnException */ public ApplicationId run() throws IOException, YarnException { LOG.info("Running Client"); yarnClient.start(); YarnClusterMetrics clusterMetrics = yarnClient.getYarnClusterMetrics(); LOG.info("Got Cluster metric info from ASM" + ", numNodeManagers=" + clusterMetrics.getNumNodeManagers()); List<NodeReport> clusterNodeReports = yarnClient.getNodeReports(NodeState.RUNNING); LOG.info("Got Cluster node info from ASM"); for (NodeReport node : clusterNodeReports) { LOG.info("Got node report from ASM for" + ", nodeId=" + node.getNodeId() + ", nodeAddress" + node.getHttpAddress() + ", nodeRackName" + node.getRackName() + ", nodeNumContainers" + node.getNumContainers()); } QueueInfo queueInfo = yarnClient.getQueueInfo(this.amQueue); LOG.info("Queue info" + ", queueName=" + queueInfo.getQueueName() + ", queueCurrentCapacity=" + queueInfo.getCurrentCapacity() + ", queueMaxCapacity=" + queueInfo.getMaximumCapacity() + ", queueApplicationCount=" + queueInfo.getApplications().size() + ", queueChildQueueCount=" + queueInfo.getChildQueues().size()); List<QueueUserACLInfo> listAclInfo = yarnClient.getQueueAclsInfo(); for (QueueUserACLInfo aclInfo : listAclInfo) { for (QueueACL userAcl : aclInfo.getUserAcls()) { LOG.info("User ACL Info for Queue" + ", queueName=" + aclInfo.getQueueName() + ", userAcl=" + userAcl.name()); } } // Get a new application id YarnClientApplication app = yarnClient.createApplication(); GetNewApplicationResponse appResponse = app.getNewApplicationResponse(); // TODO get min/max resource capabilities from RM and change memory ask if needed // If we do not have min/max, we may not be able to correctly request // the required resources from the RM for the app master // Memory ask has to be a multiple of min and less than max. // Dump out information about cluster capability as seen by the resource manager int maxMem = appResponse.getMaximumResourceCapability().getMemory(); LOG.info("Max mem capabililty of resources in this cluster " + maxMem); // A resource ask cannot exceed the max. if (amMemory > maxMem) { LOG.info("AM memory specified above max threshold of cluster. Using max value." + ", specified=" + amMemory + ", max=" + maxMem); amMemory = maxMem; } int maxVCores = appResponse.getMaximumResourceCapability().getVirtualCores(); LOG.info("Max virtual cores capabililty of resources in this cluster " + maxVCores); if (amVCores > maxVCores) { LOG.info("AM virtual cores specified above max threshold of cluster. " + "Using max value." + ", specified=" + amVCores + ", max=" + maxVCores); amVCores = maxVCores; } // set the application name ApplicationSubmissionContext appContext = app.getApplicationSubmissionContext(); ApplicationId appId = appContext.getApplicationId(); //appContext.setKeepContainersAcrossApplicationAttempts(keepContainers); appContext.setApplicationName(appName); // set local resources for the application master // local files or archives as needed // In this scenario, the jar file for the application master is part of the local resources Map<String, LocalResource> localResources = new HashMap<String, LocalResource>(); LOG.info("Copy App Master jar from local filesystem and add to local environment"); // Copy the application master jar to the filesystem // Create a local resource to point to the destination jar path FileSystem fs = FileSystem.get(conf); addToLocalResources(fs, appMasterJar, appMasterJarPath, appId.toString(), localResources, null); // Set the log4j properties if needed if (!log4jPropFile.isEmpty()) { addToLocalResources(fs, log4jPropFile, log4jPath, appId.toString(), localResources, null); } // The shell script has to be made available on the final container(s) // where it will be executed. // To do this, we need to first copy into the filesystem that is visible // to the yarn framework. // We do not need to set this as a local resource for the application // master as the application master does not need it. String hdfsShellScriptLocation = ""; long hdfsShellScriptLen = 0; long hdfsShellScriptTimestamp = 0; //if (!shellScriptPath.isEmpty()) { // Path shellSrc = new Path(fs.getHomeDirectory(), SCRIPT_PATH); String shellPathSuffix = SCRIPT_PATH; Path shellDst = new Path(fs.getHomeDirectory(), shellPathSuffix); //fs.copyFromLocalFile(false, true, shellSrc, shellDst); hdfsShellScriptLocation = shellDst.toUri().toString(); FileStatus shellFileStatus = fs.getFileStatus(shellDst); hdfsShellScriptLen = shellFileStatus.getLen(); hdfsShellScriptTimestamp = shellFileStatus.getModificationTime(); //} if (shellArgs.length > 0) { addToLocalResources(fs, null, shellArgsPath, appId.toString(), localResources, StringUtils.join(shellArgs, " ")); } // Set the necessary security tokens as needed //amContainer.setContainerTokens(containerToken); // Set the env variables to be setup in the env where the application master will be run LOG.info("Set the environment for the application master"); Map<String, String> env = new HashMap<String, String>(); // put location of shell script into env // using the env info, the application master will create the correct local resource for the // eventual containers that will be launched to execute the shell scripts env.put(DSConstants.DISTRIBUTEDSHELLSCRIPTLOCATION, hdfsShellScriptLocation); env.put(DSConstants.DISTRIBUTEDSHELLSCRIPTTIMESTAMP, Long.toString(hdfsShellScriptTimestamp)); env.put(DSConstants.DISTRIBUTEDSHELLSCRIPTLEN, Long.toString(hdfsShellScriptLen)); // Add AppMaster.jar location to classpath // At some point we should not be required to add // the hadoop specific classpaths to the env. // It should be provided out of the box. // For now setting all required classpaths including // the classpath to "." for the application jar StringBuilder classPathEnv = new StringBuilder(Environment.CLASSPATH.$()).append(File.pathSeparatorChar) .append("./*"); // StringBuilder classPathEnv = new StringBuilder(Environment.CLASSPATH.$$()) // .append(ApplicationConstants.CLASS_PATH_SEPARATOR).append("./*"); for (String c : conf.getStrings(YarnConfiguration.YARN_APPLICATION_CLASSPATH, YarnConfiguration.DEFAULT_YARN_APPLICATION_CLASSPATH)) { classPathEnv.append(File.pathSeparatorChar); classPathEnv.append(c.trim()); } classPathEnv.append(File.pathSeparatorChar).append("./log4j.properties"); // for (String c : conf.getStrings( // YarnConfiguration.YARN_APPLICATION_CLASSPATH, // YarnConfiguration.DEFAULT_YARN_CROSS_PLATFORM_APPLICATION_CLASSPATH)) { // classPathEnv.append(ApplicationConstants.CLASS_PATH_SEPARATOR); // classPathEnv.append(c.trim()); // } // classPathEnv.append(ApplicationConstants.CLASS_PATH_SEPARATOR).append( // "./log4j.properties"); // add the runtime classpath needed for tests to work if (conf.getBoolean(YarnConfiguration.IS_MINI_YARN_CLUSTER, false)) { classPathEnv.append(':'); classPathEnv.append(System.getProperty("java.class.path")); } env.put("CLASSPATH", classPathEnv.toString()); // Set the necessary command to execute the application master Vector<CharSequence> vargs = new Vector<CharSequence>(30); // Set java executable command LOG.info("Setting up app master command"); vargs.add(Environment.JAVA_HOME.$() + "/bin/java"); //vargs.add(Environment.JAVA_HOME.$$() + "/bin/java"); // Set Xmx based on am memory size vargs.add("-Xmx" + amMemory + "m"); // Set class name vargs.add(appMasterMainClass); // Set params for Application Master vargs.add("--container_memory " + String.valueOf(containerMemory)); vargs.add("--container_vcores " + String.valueOf(containerVirtualCores)); vargs.add("--num_containers " + String.valueOf(numContainers)); vargs.add("--priority " + String.valueOf(shellCmdPriority)); vargs.add("--container_retry " + String.valueOf(this.container_retry)); for (Map.Entry<String, String> entry : shellEnv.entrySet()) { vargs.add("--shell_env " + entry.getKey() + "=" + entry.getValue()); } if (debugFlag) { vargs.add("--debug"); } vargs.add("1>" + ApplicationConstants.LOG_DIR_EXPANSION_VAR + "/AppMaster.stdout"); vargs.add("2>" + ApplicationConstants.LOG_DIR_EXPANSION_VAR + "/AppMaster.stderr"); // Get final commmand StringBuilder command = new StringBuilder(); for (CharSequence str : vargs) { command.append(str).append(" "); } LOG.info("Completed setting up app master command " + command.toString()); List<String> commands = new ArrayList<String>(); commands.add(command.toString()); // Set up the container launch context for the application master ContainerLaunchContext amContainer = ContainerLaunchContext.newInstance(localResources, env, commands, null, null, null); // Set up resource type requirements // For now, both memory and vcores are supported, so we set memory and // vcores requirements Resource capability = Resource.newInstance(amMemory, amVCores); appContext.setResource(capability); // Service data is a binary blob that can be passed to the application // Not needed in this scenario // amContainer.setServiceData(serviceData); // Setup security tokens if (UserGroupInformation.isSecurityEnabled()) { // Note: Credentials class is marked as LimitedPrivate for HDFS and MapReduce Credentials credentials = new Credentials(); String tokenRenewer = conf.get(YarnConfiguration.RM_PRINCIPAL); if (tokenRenewer == null || tokenRenewer.length() == 0) { throw new IOException("Can't get Master Kerberos principal for the RM to use as renewer"); } // For now, only getting tokens for the default file-system. final Token<?> tokens[] = fs.addDelegationTokens(tokenRenewer, credentials); if (tokens != null) { for (Token<?> token : tokens) { LOG.info("Got dt for " + fs.getUri() + "; " + token); } } DataOutputBuffer dob = new DataOutputBuffer(); credentials.writeTokenStorageToStream(dob); ByteBuffer fsTokens = ByteBuffer.wrap(dob.getData(), 0, dob.getLength()); amContainer.setTokens(fsTokens); } appContext.setAMContainerSpec(amContainer); // Set the priority for the application master // TODO - what is the range for priority? how to decide? Priority pri = Priority.newInstance(amPriority); appContext.setPriority(pri); // Set the queue to which this application is to be submitted in the RM appContext.setQueue(amQueue); // Submit the application to the applications manager // SubmitApplicationResponse submitResp = applicationsManager.submitApplication(appRequest); // Ignore the response as either a valid response object is returned on success // or an exception thrown to denote some form of a failure LOG.info("Submitting application to ASM"); yarnClient.submitApplication(appContext); // TODO // Try submitting the same request again // app submission failure? // Monitor the application return appId; }
From source file:com.sogou.dockeronyarn.service.DockerApplicationMaster_24.java
License:Apache License
/** * Main run function for the application master * * @throws YarnException//from w ww .j ava 2 s. c o m * @throws IOException */ @SuppressWarnings({ "unchecked" }) public void run() throws YarnException, IOException { LOG.info("Starting ApplicationMaster"); try { publishApplicationAttemptEvent(timelineClient, appAttemptID.toString(), DSEvent.DS_APP_ATTEMPT_START); } catch (Exception e) { LOG.error("App Attempt start event coud not be pulished for " + appAttemptID.toString(), e); } // Note: Credentials, Token, UserGroupInformation, DataOutputBuffer class // are marked as LimitedPrivate Credentials credentials = UserGroupInformation.getCurrentUser().getCredentials(); DataOutputBuffer dob = new DataOutputBuffer(); credentials.writeTokenStorageToStream(dob); // Now remove the AM->RM token so that containers cannot access it. Iterator<Token<?>> iter = credentials.getAllTokens().iterator(); LOG.info("Executing with tokens:"); while (iter.hasNext()) { Token<?> token = iter.next(); LOG.info(token); if (token.getKind().equals(AMRMTokenIdentifier.KIND_NAME)) { iter.remove(); } } allTokens = ByteBuffer.wrap(dob.getData(), 0, dob.getLength()); // Create appSubmitterUgi and add original tokens to it String appSubmitterUserName = System.getenv(ApplicationConstants.Environment.USER.name()); appSubmitterUgi = UserGroupInformation.createRemoteUser(appSubmitterUserName); appSubmitterUgi.addCredentials(credentials); AMRMClientAsync.CallbackHandler allocListener = new RMCallbackHandler(); amRMClient = AMRMClientAsync.createAMRMClientAsync(1000, allocListener); amRMClient.init(conf); amRMClient.start(); containerListener = createNMCallbackHandler(); nmClientAsync = new NMClientAsyncImpl(containerListener); nmClientAsync.init(conf); nmClientAsync.start(); // Setup local RPC Server to accept status requests directly from clients // TODO need to setup a protocol for client to be able to communicate to // the RPC server // TODO use the rpc port info to register with the RM for the client to // send requests to this app master // Register self with ResourceManager // This will start heartbeating to the RM appMasterHostname = NetUtils.getHostname(); RegisterApplicationMasterResponse response = amRMClient.registerApplicationMaster(appMasterHostname, appMasterRpcPort, appMasterTrackingUrl); // Dump out information about cluster capability as seen by the // resource manager int maxMem = response.getMaximumResourceCapability().getMemory(); LOG.info("Max mem capabililty of resources in this cluster " + maxMem); int maxVCores = response.getMaximumResourceCapability().getVirtualCores(); LOG.info("Max vcores capabililty of resources in this cluster " + maxVCores); // A resource ask cannot exceed the max. if (containerMemory > maxMem) { LOG.info("Container memory specified above max threshold of cluster." + " Using max value." + ", specified=" + containerMemory + ", max=" + maxMem); containerMemory = maxMem; } if (containerVirtualCores > maxVCores) { LOG.info("Container virtual cores specified above max threshold of cluster." + " Using max value." + ", specified=" + containerVirtualCores + ", max=" + maxVCores); containerVirtualCores = maxVCores; } List<Container> previousAMRunningContainers = response.getContainersFromPreviousAttempts(); LOG.info(appAttemptID + " received " + previousAMRunningContainers.size() + " previous attempts' running containers on AM registration."); numAllocatedContainers.addAndGet(previousAMRunningContainers.size()); int numTotalContainersToRequest = numTotalContainers - previousAMRunningContainers.size(); // Setup ask for containers from RM // Send request for containers to RM // Until we get our fully allocated quota, we keep on polling RM for // containers // Keep looping until all the containers are launched and shell script // executed on them ( regardless of success/failure). for (int i = 0; i < numTotalContainersToRequest; ++i) { ContainerRequest containerAsk = setupContainerAskForRM(); amRMClient.addContainerRequest(containerAsk); } numRequestedContainers.set(numTotalContainers); try { publishApplicationAttemptEvent(timelineClient, appAttemptID.toString(), DSEvent.DS_APP_ATTEMPT_END); } catch (Exception e) { LOG.error("App Attempt start event coud not be pulished for " + appAttemptID.toString(), e); } numRetryCount.set(0); }