Example usage for org.apache.hadoop.mapred FileInputFormat setInputPaths

List of usage examples for org.apache.hadoop.mapred FileInputFormat setInputPaths

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Introduction

In this page you can find the example usage for org.apache.hadoop.mapred FileInputFormat setInputPaths.

Prototype

public static void setInputPaths(JobConf conf, Path... inputPaths)

Source Link

Document

Set the array of Path s as the list of inputs for the map-reduce job.

Usage

From source file:SBP.java

License:Apache License

protected JobConf configInitMessage() throws Exception {
    final JobConf conf = new JobConf(getConf(), SBP.class);
    conf.set("nstate", "" + nstate);
    conf.set("compat_matrix_str", "" + edge_potential_str);
    conf.setJobName("BP_Init_Belief");

    conf.setMapperClass(MapInitializeBelief.class);

    fs.delete(message_cur_path, true);//w w w.jav a2  s  .  c o  m

    FileInputFormat.setInputPaths(conf, edge_path);
    FileOutputFormat.setOutputPath(conf, message_cur_path);

    conf.setNumReduceTasks(0);

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);
    return conf;
}

From source file:SBP.java

License:Apache License

protected JobConf configSumErr() throws Exception {
    final JobConf conf = new JobConf(getConf(), SBP.class);
    conf.set("nstate", "" + nstate);
    conf.setJobName("BP_Sum Err");

    fs.delete(sum_error_path, true);/*  ww w.j  a  v  a 2 s.  c o m*/

    conf.setMapperClass(MapSumErr.class);
    conf.setReducerClass(RedSumErr.class);

    FileInputFormat.setInputPaths(conf, check_error_path);
    FileOutputFormat.setOutputPath(conf, sum_error_path);

    conf.setNumReduceTasks(1);

    conf.setOutputKeyClass(LongWritable.class);
    conf.setOutputValueClass(Text.class);

    return conf;
}

From source file:gen_rank.java

License:LGPL

public static void runjob(String input, String output) throws Exception {
    JobConf conf = new JobConf(gen_rank.class);
    conf.setJobName("Preparing_data");

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    conf.setMapperClass(Map.class);
    conf.setCombinerClass(Reduce.class);
    conf.setReducerClass(Reduce.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(input));
    FileOutputFormat.setOutputPath(conf, new Path(output));

    JobClient.runJob(conf);// w w w  .  j  a  v  a 2  s.co m
}

From source file:WikipediaForwardIndexBuilder.java

License:Apache License

@SuppressWarnings("static-access")
@Override//from   ww  w  .j a va 2 s. c  o  m
public int run(String[] args) throws Exception {
    Options options = new Options();
    options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("input").create(INPUT_OPTION));
    options.addOption(
            OptionBuilder.withArgName("path").hasArg().withDescription("index file").create(INDEX_FILE_OPTION));
    options.addOption(OptionBuilder.withArgName("en|sv|de|cs|es|zh|ar|tr").hasArg()
            .withDescription("two-letter language code").create(LANGUAGE_OPTION));

    CommandLine cmdline;
    CommandLineParser parser = new GnuParser();
    try {
        cmdline = parser.parse(options, args);
    } catch (ParseException exp) {
        System.err.println("Error parsing command line: " + exp.getMessage());
        return -1;
    }

    if (!cmdline.hasOption(INPUT_OPTION) || !cmdline.hasOption(INDEX_FILE_OPTION)) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(this.getClass().getName(), options);
        ToolRunner.printGenericCommandUsage(System.out);
        return -1;
    }

    Path inputPath = new Path(cmdline.getOptionValue(INPUT_OPTION));
    String indexFile = cmdline.getOptionValue(INDEX_FILE_OPTION);

    String tmpPath = "tmp-" + WikipediaForwardIndexBuilder.class.getSimpleName() + "-" + RANDOM.nextInt(10000);

    if (!inputPath.isAbsolute()) {
        System.err.println("Error: " + INPUT_OPTION + " must be an absolute path!");
        return -1;
    }

    String language = null;
    if (cmdline.hasOption(LANGUAGE_OPTION)) {
        language = cmdline.getOptionValue(LANGUAGE_OPTION);
        if (language.length() != 2) {
            System.err.println("Error: \"" + language + "\" unknown language!");
            return -1;
        }
    }

    JobConf conf = new JobConf(getConf(), WikipediaForwardIndexBuilder.class);
    FileSystem fs = FileSystem.get(conf);

    LOG.info("Tool name: " + this.getClass().getName());
    LOG.info(" - input path: " + inputPath);
    LOG.info(" - index file: " + indexFile);
    LOG.info(" - language: " + language);
    LOG.info("Note: This tool only works on block-compressed SequenceFiles!");

    conf.setJobName(String.format("BuildWikipediaForwardIndex[%s: %s, %s: %s, %s: %s]", INPUT_OPTION, inputPath,
            INDEX_FILE_OPTION, indexFile, LANGUAGE_OPTION, language));

    conf.setNumReduceTasks(1);

    FileInputFormat.setInputPaths(conf, inputPath);
    FileOutputFormat.setOutputPath(conf, new Path(tmpPath));
    FileOutputFormat.setCompressOutput(conf, false);

    if (language != null) {
        conf.set("wiki.language", language);
    }

    conf.setInputFormat(NoSplitSequenceFileInputFormat.class);
    conf.setOutputKeyClass(IntWritable.class);
    conf.setOutputValueClass(Text.class);

    conf.setMapRunnerClass(MyMapRunner.class);
    conf.setReducerClass(IdentityReducer.class);

    // Delete the output directory if it exists already.
    fs.delete(new Path(tmpPath), true);

    RunningJob job = JobClient.runJob(conf);

    Counters counters = job.getCounters();
    int blocks = (int) counters.getCounter(Blocks.Total);

    LOG.info("number of blocks: " + blocks);

    LOG.info("Writing index file...");
    LineReader reader = new LineReader(fs.open(new Path(tmpPath + "/part-00000")));
    FSDataOutputStream out = fs.create(new Path(indexFile), true);

    out.writeUTF(edu.umd.cloud9.collection.wikipedia.WikipediaForwardIndex.class.getCanonicalName());
    out.writeUTF(inputPath.toString());
    out.writeInt(blocks);

    int cnt = 0;
    Text line = new Text();
    while (reader.readLine(line) > 0) {
        String[] arr = line.toString().split("\\s+");

        int docno = Integer.parseInt(arr[0]);
        int offset = Integer.parseInt(arr[1]);
        short fileno = Short.parseShort(arr[2]);

        out.writeInt(docno);
        out.writeInt(offset);
        out.writeShort(fileno);

        cnt++;

        if (cnt % 100000 == 0) {
            LOG.info(cnt + " blocks written");
        }
    }

    reader.close();
    out.close();

    if (cnt != blocks) {
        throw new RuntimeException("Error: mismatch in block count!");
    }

    // Clean up.
    fs.delete(new Path(tmpPath), true);

    return 0;
}

From source file:GapDeduceRunner.java

License:Apache License

public static void main(String[] args) throws IOException {
    JobConf conf = new JobConf(GapDeduceRunner.class);
    conf.setJobName("gapdeduce");

    conf.setMapOutputKeyClass(Text.class);
    conf.setMapOutputValueClass(Text.class);

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(Text.class);

    conf.setMapperClass(Gapper.class);
    conf.setReducerClass(Deducer.class);

    // KeyValueTextInputFormat treats each line as an input record, 
    // and splits the line by the tab character to separate it into key and value 
    conf.setInputFormat(KeyValueTextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(args[0]));
    FileOutputFormat.setOutputPath(conf, new Path(args[1]));

    JobClient.runJob(conf);/*from  w  w w. j av  a 2  s  .  c om*/
}

From source file:LicenseStatewiseCount.java

public static void main(String[] args) throws Exception {

    JobConf conf = new JobConf(ParkingTicketStatewiseCount.class);
    conf.setJobName("Statecounts");

    conf.setOutputKeyClass(Text.class);
    conf.setOutputValueClass(IntWritable.class);

    conf.setMapperClass(Map.class);
    conf.setReducerClass(Reduce.class);

    conf.setInputFormat(TextInputFormat.class);
    conf.setOutputFormat(TextOutputFormat.class);

    FileInputFormat.setInputPaths(conf, new Path(args[0]));
    FileOutputFormat.setOutputPath(conf, new Path(args[1]));

    JobClient.runJob(conf);//from   w  w  w . j a v  a  2 s.co  m

}

From source file:TestFormatStorageRecordReader.java

License:Open Source License

static RecordReader<WritableComparable, Writable> getRecReader(JobConf conf, String path) throws IOException {
    conf.set("mapred.input.dir", path);

    FileInputFormat.setInputPaths(conf, path);

    InputFormat inputFormat = new FormatStorageInputFormat();
    InputSplit[] inputSplits = inputFormat.getSplits(conf, 1);

    System.out.println("get Splits:" + inputSplits.length);

    return inputFormat.getRecordReader(inputSplits[0], conf, Reporter.NULL);

}

From source file:DijikstraAlgo.java

License:GNU General Public License

public static void run(String[] args) throws Exception {
    IN = "hdfs://10.8.3.161:9000/user/sagar/input/";
    OUT = "hdfs://10.8.3.161:9000/user/sagar/output/";
    String input = IN;//from w  w w  . j a va  2 s. c  o m
    String output = OUT + System.nanoTime();
    String MAX_SPLIT_SIZE = args[0];
    boolean isdone = false;

    // Reiteration again and again till the convergence
    while (isdone == false) {
        JobConf conf = new JobConf(DijikstraAlgo.class);
        conf.setJobName("Dijikstra");
        // conf.set("mapred.max.split.size", MAX_SPLIT_SIZE);
        conf.setOutputKeyClass(LongWritable.class);
        conf.setOutputValueClass(Text.class);
        conf.setMapperClass(Map.class);
        conf.setReducerClass(Reduce.class);
        conf.setInputFormat(TextInputFormat.class);
        conf.setOutputFormat(TextOutputFormat.class);

        FileInputFormat.setInputPaths(conf, new Path(input));
        FileOutputFormat.setOutputPath(conf, new Path(output));

        JobClient.runJob(conf);

        input = output + "/part-00000";
        isdone = true;// set the job to NOT run again!
        Path ofile = new Path(input);
        FileSystem fs = FileSystem.get(new URI("hdfs://10.8.3.165:9000"), conf);
        //FileSystem fs = FileSystem.get(new Configuration());
        BufferedReader br = new BufferedReader(new InputStreamReader(fs.open(ofile)));
        HashMap<Integer, Integer> imap = new HashMap<Integer, Integer>();
        String line = br.readLine();
        // Read the current output file and put it into HashMap
        while (line != null) {
            String[] sp = line.split("\t| ");
            int node = Integer.parseInt(sp[0]);
            int distance = Integer.parseInt(sp[1]);
            imap.put(node, distance);
            line = br.readLine();
        }
        br.close();

        // Check for convergence condition if any node is still left then
        // continue else stop
        Iterator<Integer> itr = imap.keySet().iterator();
        while (itr.hasNext()) {
            int key = itr.next();
            int value = imap.get(key);
            if (value >= 125) {
                isdone = false;
            }
        }
        input = output;
        output = OUT + System.nanoTime();
    }
}

From source file:PiEstimator.java

License:Apache License

/**
 * Run a map/reduce job for estimating Pi.
 *
 * @return the estimated value of Pi/*from ww w. j a  v a2  s  .  c o m*/
 */
public static BigDecimal estimate(int numMaps, long numPoints, JobConf jobConf) throws IOException {
    // setup job conf
    jobConf.setJobName(PiEstimator.class.getSimpleName());

    jobConf.setInputFormat(SequenceFileInputFormat.class);

    jobConf.setOutputKeyClass(BooleanWritable.class);
    jobConf.setOutputValueClass(LongWritable.class);
    jobConf.setOutputFormat(SequenceFileOutputFormat.class);

    jobConf.setMapperClass(PiMapper.class);
    jobConf.setNumMapTasks(numMaps);

    jobConf.setReducerClass(PiReducer.class);
    jobConf.setNumReduceTasks(1);

    // turn off speculative execution, because DFS doesn't handle
    // multiple writers to the same file.
    jobConf.setSpeculativeExecution(false);

    // setup input/output directories
    final Path inDir = new Path(TMP_DIR, "in");
    final Path outDir = new Path(TMP_DIR, "out");
    FileInputFormat.setInputPaths(jobConf, inDir);
    FileOutputFormat.setOutputPath(jobConf, outDir);

    final FileSystem fs = FileSystem.get(jobConf);
    if (fs.exists(TMP_DIR)) {
        throw new IOException(
                "Tmp directory " + fs.makeQualified(TMP_DIR) + " already exists.  Please remove it first.");
    }
    if (!fs.mkdirs(inDir)) {
        throw new IOException("Cannot create input directory " + inDir);
    }

    try {
        // generate an input file for each map task
        for (int i = 0; i < numMaps; ++i) {
            final Path file = new Path(inDir, "part" + i);
            final LongWritable offset = new LongWritable(i * numPoints);
            final LongWritable size = new LongWritable(numPoints);
            final SequenceFile.Writer writer = SequenceFile.createWriter(fs, jobConf, file, LongWritable.class,
                    LongWritable.class, CompressionType.NONE);
            try {
                writer.append(offset, size);
            } finally {
                writer.close();
            }
            System.out.println("Wrote input for Map #" + i);
        }

        // start a map/reduce job
        System.out.println("Starting Job");
        final long startTime = System.currentTimeMillis();
        JobClient.runJob(jobConf);
        final double duration = (System.currentTimeMillis() - startTime) / 1000.0;
        System.out.println("Job Finished in " + duration + " seconds");

        // read outputs
        Path inFile = new Path(outDir, "reduce-out");
        LongWritable numInside = new LongWritable();
        LongWritable numOutside = new LongWritable();
        SequenceFile.Reader reader = new SequenceFile.Reader(fs, inFile, jobConf);
        try {
            reader.next(numInside, numOutside);
        } finally {
            reader.close();
        }

        // compute estimated value
        return BigDecimal.valueOf(4).setScale(20).multiply(BigDecimal.valueOf(numInside.get()))
                .divide(BigDecimal.valueOf(numMaps)).divide(BigDecimal.valueOf(numPoints));
    } finally {
        fs.delete(TMP_DIR, true);
    }
}

From source file:DataJoinJob.java

License:Apache License

public static JobConf createDataJoinJob(String args[]) throws IOException {

    String inputDir = args[0];// w  w w  .  j a v  a2 s .  com
    String outputDir = args[1];
    Class inputFormat = SequenceFileInputFormat.class;
    if (args[2].compareToIgnoreCase("text") != 0) {
        System.out.println("Using SequenceFileInputFormat: " + args[2]);
    } else {
        System.out.println("Using TextInputFormat: " + args[2]);
        inputFormat = TextInputFormat.class;
    }
    int numOfReducers = Integer.parseInt(args[3]);
    Class mapper = getClassByName(args[4]);
    Class reducer = getClassByName(args[5]);
    Class mapoutputValueClass = getClassByName(args[6]);
    Class outputFormat = TextOutputFormat.class;
    Class outputValueClass = Text.class;
    if (args[7].compareToIgnoreCase("text") != 0) {
        System.out.println("Using SequenceFileOutputFormat: " + args[7]);
        outputFormat = SequenceFileOutputFormat.class;
        outputValueClass = getClassByName(args[7]);
    } else {
        System.out.println("Using TextOutputFormat: " + args[7]);
    }
    long maxNumOfValuesPerGroup = 100;
    String jobName = "";
    if (args.length > 8) {
        maxNumOfValuesPerGroup = Long.parseLong(args[8]);
    }
    if (args.length > 9) {
        jobName = args[9];
    }
    Configuration defaults = new Configuration();
    JobConf job = new JobConf(defaults, DataJoinJob.class);
    job.setJobName("DataJoinJob: " + jobName);

    FileSystem fs = FileSystem.get(defaults);
    fs.delete(new Path(outputDir));
    FileInputFormat.setInputPaths(job, inputDir);

    job.setInputFormat(inputFormat);

    job.setMapperClass(mapper);
    FileOutputFormat.setOutputPath(job, new Path(outputDir));
    job.setOutputFormat(outputFormat);
    SequenceFileOutputFormat.setOutputCompressionType(job, SequenceFile.CompressionType.BLOCK);
    job.setMapOutputKeyClass(Text.class);
    job.setMapOutputValueClass(mapoutputValueClass);
    job.setOutputKeyClass(Text.class);
    job.setOutputValueClass(outputValueClass);
    job.setReducerClass(reducer);

    job.setNumMapTasks(1);
    job.setNumReduceTasks(numOfReducers);
    job.setLong("datajoin.maxNumOfValuesPerGroup", maxNumOfValuesPerGroup);
    return job;
}