Example usage for org.apache.wicket.model AbstractReadOnlyModel AbstractReadOnlyModel

List of usage examples for org.apache.wicket.model AbstractReadOnlyModel AbstractReadOnlyModel

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In this page you can find the example usage for org.apache.wicket.model AbstractReadOnlyModel AbstractReadOnlyModel.

Prototype

AbstractReadOnlyModel

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Usage

From source file:au.org.theark.lims.web.component.biospecimenupload.SearchResultListPanel.java

License:Open Source License

/**
 * //ww w  .java2s .co m
 * @param iModel
 * @return the pageableListView of Upload
 */
@SuppressWarnings("unchecked")
public PageableListView<Upload> buildPageableListView(IModel iModel) {
    PageableListView<Upload> sitePageableListView = new PageableListView<Upload>(Constants.RESULT_LIST, iModel,
            iArkCommonService.getUserConfig(Constants.CONFIG_ROWS_PER_PAGE).getIntValue()) {

        private static final long serialVersionUID = 1L;

        @Override
        protected void populateItem(final ListItem<Upload> item) {
            Upload upload = item.getModelObject();

            // The ID
            if (upload.getId() != null) {
                // Add the id component here
                item.add(new Label(Constants.UPLOADVO_UPLOAD_ID, upload.getId().toString()));
            } else {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_ID, ""));
            }

            // / The filename
            if (upload.getFilename() != null) {
                // Add the id component here
                item.add(new Label(Constants.UPLOADVO_UPLOAD_FILENAME, upload.getFilename()));
            } else {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_FILENAME, ""));
            }

            // File Format
            if (upload.getFileFormat() != null) {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_FILE_FORMAT, upload.getFileFormat().getName()));
            } else {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_FILE_FORMAT, ""));
            }

            // UserId
            if (upload.getUserId() != null) {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_USER_ID, upload.getUserId()));
            } else {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_USER_ID, ""));
            }

            // Start time
            if (upload.getStartTime() != null) {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_START_TIME, upload.getStartTime().toString()));
            } else {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_START_TIME, ""));
            }

            // Finish time
            if (upload.getFinishTime() != null) {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_FINISH_TIME, upload.getFinishTime().toString()));
            } else {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_FINISH_TIME, ""));
            }

            if (upload.getUploadStatus() != null && upload.getUploadStatus().getShortMessage() != null) {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_UPLOAD_STATUS_NAME,
                        upload.getUploadStatus().getShortMessage()));
            } else {
                item.add(new Label(Constants.UPLOADVO_UPLOAD_UPLOAD_STATUS_NAME, ""));
            }

            // Download file link button
            item.add(buildDownloadButton(upload));

            // Download upload report button
            item.add(buildDownloadReportButton(upload));

            // Delete the upload file
            //            item.add(buildDeleteButton(upload));

            // For the alternative stripes
            item.add(new AttributeModifier("class", new AbstractReadOnlyModel<String>() {
                private static final long serialVersionUID = 1L;

                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? "even" : "odd";
                }
            }));
        }
    };
    return sitePageableListView;
}

From source file:au.org.theark.lims.web.component.biotransaction.BioTransactionListPanel.java

License:Open Source License

/**
 * //ww  w . j  ava2  s . com
 * @param iModel
 * @return the pageableListView of BioCollection
 */
public DataView<BioTransaction> buildDataView(ArkDataProvider2<LimsVO, BioTransaction> bioTransactionProvider) {

    final SimpleDateFormat simpleDateFormat = new SimpleDateFormat(au.org.theark.core.Constants.DD_MM_YYYY);

    DataView<BioTransaction> bioTransactionDataView = new DataView<BioTransaction>("bioTransactionList",
            bioTransactionProvider) {

        private static final long serialVersionUID = 1L;

        @Override
        protected void populateItem(final Item<BioTransaction> item) {
            item.setOutputMarkupId(true);
            // DO NOT store the item.getModelObject! Checking it is ok...
            final BioTransaction bioTransaction = item.getModelObject();

            WebMarkupContainer rowDetailsWMC = new WebMarkupContainer("rowDetailsWMC", item.getModel());
            AjaxConfirmLink<BioTransaction> rowDeleteLink = new AjaxConfirmLink<BioTransaction>("rowDeleteLink",
                    new StringResourceModel("bioTransaction.confirmDelete", this, item.getModel()),
                    item.getModel()) {

                private static final long serialVersionUID = 1L;

                @Override
                public void onClick(AjaxRequestTarget target) {
                    BioTransaction bioTransaction = getModelObject();
                    iLimsService.deleteBioTransaction(bioTransaction);

                    // update biospecimen (qty avail)
                    Double qtyAvail = iLimsService.getQuantityAvailable(cpModel.getObject().getBiospecimen());
                    cpModel.getObject().getBiospecimen().setQuantity(qtyAvail);
                    try {
                        iLimsService.updateBiospecimen(cpModel.getObject());
                    } catch (ArkSystemException e) {
                        this.error(e.getMessage());
                    }

                    this.info("Successfully removed the transaction");
                    target.add(feedbackPanel);
                    target.add(dataViewListWMC); // repaint the list
                    target.add(dataViewListWMC.getParent().getParent()); // repaint the parent form
                }

            };
            rowDetailsWMC.add(rowDeleteLink);
            //            if ((bioTransaction.getStatus() != null) && (bioTransaction.getStatus().getName().equalsIgnoreCase(Constants.BIOTRANSACTION_STATUS_INITIAL_QUANTITY))) {
            //               // do not allow the initial quantity to be deleted
            //               rowDetailsWMC.setVisible(false);
            //            }

            idLbl = new Label("bioTransaction.id", bioTransaction.getId().toString());
            String dateOfTransaction = "";
            if (bioTransaction.getTransactionDate() != null) {
                dateOfTransaction = simpleDateFormat.format(bioTransaction.getTransactionDate());
            }
            transactionDateLbl = new Label("bioTransaction.transactionDate", dateOfTransaction);

            if (bioTransaction.getQuantity() == null) {
                quantityLbl = new Label("bioTransaction.quantity", "0");
            } else {
                quantityLbl = new Label("bioTransaction.quantity", bioTransaction.getQuantity().toString());
            }
            if (bioTransaction.getBiospecimen().getUnit() == null) {
                unitsLbl = new Label("bioTransaction.biospecimen.unit.name", "");
            } else {
                unitsLbl = new Label("bioTransaction.biospecimen.unit.name",
                        bioTransaction.getBiospecimen().getUnit().getName());
            }
            reasonLbl = new Label("bioTransaction.reason", bioTransaction.getReason());
            recorderLbl = new Label("bioTransaction.recorder", bioTransaction.getRecorder());
            if (bioTransaction.getStatus() == null) {
                statusLbl = new Label("bioTransaction.status.name", "");
            } else {
                statusLbl = new Label("bioTransaction.status.name", bioTransaction.getStatus().getName());
            }
            if (bioTransaction.getAccessRequest() == null) {
                requestLbl = new Label("bioTransaction.accessRequest.id", "");
            } else {
                requestLbl = new Label("bioTransaction.accessRequest.id",
                        bioTransaction.getAccessRequest().getId().toString());
            }

            item.add(idLbl);
            item.add(transactionDateLbl);

            if (bioTransaction.getQuantity() > 0) {
                quantityImage = new ContextImage("bioTransaction.quantityImage",
                        new Model<String>("images/icons/arrow_up.png"));
            } else {
                quantityImage = new ContextImage("bioTransaction.quantityImage",
                        new Model<String>("images/icons/arrow_down_red.png"));
            }

            item.add(quantityImage);
            item.add(quantityLbl);
            item.add(unitsLbl);
            item.add(reasonLbl);
            item.add(recorderLbl);
            item.add(statusLbl);
            item.add(requestLbl);
            item.add(rowDetailsWMC);

            item.add(new AttributeModifier(Constants.CLASS, new AbstractReadOnlyModel<String>() {
                private static final long serialVersionUID = 1L;

                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? Constants.EVEN : Constants.ODD;
                }
            }));
        }

    };

    return bioTransactionDataView;
}

From source file:au.org.theark.lims.web.component.bioupload.SearchResultListPanel.java

License:Open Source License

/**
 * /*from w ww  .  j  av  a 2 s  . c o  m*/
 * @param iModel
 * @return the pageableListView of Upload
 */
@SuppressWarnings("unchecked")
public PageableListView<Upload> buildPageableListView(IModel iModel) {
    PageableListView<Upload> sitePageableListView = new PageableListView<Upload>(Constants.RESULT_LIST, iModel,
            iArkCommonService.getUserConfig(Constants.CONFIG_ROWS_PER_PAGE).getIntValue()) {

        private static final long serialVersionUID = 1L;

        @Override
        protected void populateItem(final ListItem<Upload> item) {
            Upload upload = item.getModelObject();

            // The ID
            if (upload.getId() != null) {
                // Add the id component here
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_ID,
                        upload.getId().toString()));
            } else {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_ID, ""));
            }

            // / The filename
            if (upload.getFilename() != null) {
                // Add the id component here
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_FILENAME,
                        upload.getFilename()));
            } else {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_FILENAME, ""));
            }

            // File Format
            if (upload.getFileFormat() != null) {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_FILE_FORMAT,
                        upload.getFileFormat().getName()));
            } else {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_FILE_FORMAT, ""));
            }

            // UserId
            if (upload.getUserId() != null) {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_USER_ID,
                        upload.getUserId()));
            } else {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_USER_ID, ""));
            }

            // Start time
            if (upload.getStartTime() != null) {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_START_TIME,
                        upload.getStartTime().toString()));
            } else {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_START_TIME, ""));
            }

            // Finish time
            if (upload.getFinishTime() != null) {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_FINISH_TIME,
                        upload.getFinishTime().toString()));
            } else {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_FINISH_TIME, ""));
            }

            // Finish time
            if (upload.getUploadStatus() != null && upload.getUploadStatus().getShortMessage() != null) {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_UPLOAD_STATUS_NAME,
                        upload.getUploadStatus().getShortMessage()));
            } else {
                item.add(new Label(au.org.theark.lims.web.Constants.UPLOADVO_UPLOAD_UPLOAD_STATUS_NAME, ""));
            }

            // Download file link button
            item.add(buildDownloadButton(upload));

            // Download upload report button
            item.add(buildDownloadReportButton(upload));

            // Delete the upload file
            // item.add(buildDeleteButton(upload));

            // For the alternative stripes
            item.add(new AttributeModifier("class", new AbstractReadOnlyModel<String>() {

                private static final long serialVersionUID = 1L;

                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? "even" : "odd";
                }
            }));
        }
    };
    return sitePageableListView;
}

From source file:au.org.theark.lims.web.component.global.biospecimen.form.BiospecimenListForm.java

License:Open Source License

/**
 * //w ww. j a  va  2  s.c  om
 * @param iModel
 * @return the pageableListView of BioCollection
 */
public DataView<Biospecimen> buildDataView(ArkDataProvider2<LimsVO, Biospecimen> biospecimenProvider) {

    DataView<Biospecimen> biospecimenDataView = new DataView<Biospecimen>("biospecimenList",
            biospecimenProvider) {

        private static final long serialVersionUID = 1L;

        @Override
        protected void populateItem(final Item<Biospecimen> item) {
            item.setOutputMarkupId(true);
            // DO NOT store the item.getModelObject! Checking it is ok...
            final Biospecimen biospecimen = item.getModelObject();

            WebMarkupContainer rowDetailsWMC = new WebMarkupContainer("rowDetailsWMC", item.getModel());
            ArkBusyAjaxLink listDetailsLink = new ArkBusyAjaxLink("listDetailsLink") {

                private static final long serialVersionUID = 1L;

                @Override
                public void onClick(AjaxRequestTarget target) {
                    CompoundPropertyModel<LimsVO> newModel = new CompoundPropertyModel<LimsVO>(new LimsVO());
                    try {
                        Biospecimen biospecimenFromDB = iLimsService.getBiospecimen(biospecimen.getId());
                        Study study = iArkCommonService.getStudy(biospecimenFromDB.getStudy().getId());
                        LinkSubjectStudy linkSubjectStudy = iArkCommonService.getSubjectByUID(
                                biospecimenFromDB.getLinkSubjectStudy().getSubjectUID(), study);
                        biospecimenFromDB.setStudy(study);
                        biospecimenFromDB.setLinkSubjectStudy(linkSubjectStudy);

                        setContextItems(target, linkSubjectStudy);

                        newModel.getObject().setLinkSubjectStudy(linkSubjectStudy);
                        newModel.getObject().setBiospecimen(biospecimenFromDB);
                        newModel.getObject().setBioCollection(biospecimenFromDB.getBioCollection());
                        newModel.getObject().setTreeModel(cpModel.getObject().getTreeModel());
                        showModalWindow(target, newModel);
                    } catch (EntityNotFoundException e) {
                        log.error(e.getMessage());
                    }
                }

            };

            idLblFld = new Label("biospecimen.id", String.valueOf(biospecimen.getId()));

            nameLblFld = new Label("biospecimen.biospecimenUid", biospecimen.getBiospecimenUid());
            listDetailsLink.add(nameLblFld);
            rowDetailsWMC.add(listDetailsLink);

            studyLblFld = new Label("biospecimen.study.name", biospecimen.getStudy().getName());
            subjectUidLblFld = new Label("biospecimen.linkSubjectStudy.subjectUid",
                    biospecimen.getLinkSubjectStudy().getSubjectUID());
            sampleTypeLblFld = new Label("biospecimen.sampleType.name", biospecimen.getSampleType().getName());
            collectionLblFld = new Label("biospecimen.bioCollection.biocollectionUid",
                    biospecimen.getBioCollection().getBiocollectionUid());

            biospecimen.setQuantity(iLimsService.getQuantityAvailable(biospecimen));
            if (biospecimen.getQuantity() == null) {
                quantityLblFld = new Label("biospecimen.quantity", "0");
            } else {
                quantityLblFld = new Label("biospecimen.quantity", biospecimen.getQuantity().toString());
            }
            if (biospecimen.getUnit() == null) {
                unitsLblFld = new Label("biospecimen.unit", "");
            } else {
                unitsLblFld = new Label("biospecimen.unit", biospecimen.getUnit().getName());
            }

            try {
                locationLbl = new Label("biospecimen.location", "view");
                locationLink = new ArkBusyAjaxLink("biospecimen.location.link") {

                    /**
                     * 
                     */
                    private static final long serialVersionUID = 1L;

                    @Override
                    public void onClick(AjaxRequestTarget target) {
                        CompoundPropertyModel<LimsVO> newModel = new CompoundPropertyModel<LimsVO>(
                                new LimsVO());
                        newModel.getObject().getBiospecimen().setId(biospecimen.getId());
                        BiospecimenLocationVO biospecimenLocationVo;
                        try {
                            biospecimenLocationVo = iInventoryService.getBiospecimenLocation(biospecimen);
                            newModel.getObject().setBiospecimenLocationVO(biospecimenLocationVo);
                            BioLocationPanel bioLocationPanel = new BioLocationPanel("content", newModel) {
                                /**
                                 * 
                                 */
                                private static final long serialVersionUID = 1L;

                                @Override
                                public void refreshParentPanel(AjaxRequestTarget target) {
                                }
                            };
                            bioLocationPanel.getUnallocateButton().setVisible(false);
                            bioLocationPanel.add(new AttributeModifier("class", "detailsPanelBorder"));
                            // Set the modalWindow title and content
                            modalWindow.setTitle("Biospecimen Location Detail");
                            modalWindow.setContent(bioLocationPanel);
                            modalWindow.show(target);
                        } catch (ArkSystemException e) {
                            log.error(e.getMessage());
                        }
                    }
                };

                locationLink.add(locationLbl);

                BiospecimenLocationVO biospecimenLocationVo = iInventoryService
                        .getBiospecimenLocation(biospecimen);
                if (!biospecimenLocationVo.getIsAllocated()) {
                    locationLink.setVisible(false);
                }
            } catch (ArkSystemException e) {
                log.error(e.getMessage());
            }

            item.add(idLblFld);
            item.add(rowDetailsWMC);
            item.add(studyLblFld);
            item.add(subjectUidLblFld);
            item.add(sampleTypeLblFld);
            item.add(collectionLblFld);
            item.add(quantityLblFld);
            item.add(unitsLblFld);
            item.add(locationLink);

            if (biospecimen.getBarcoded()) {
                item.addOrReplace(
                        new ContextImage("biospecimen.barcoded", new Model<String>("images/icons/tick.png")));
            } else {
                item.addOrReplace(
                        new ContextImage("biospecimen.barcoded", new Model<String>("images/icons/cross.png")));
            }

            item.add(new AjaxButton("batchAliquot") {

                /**
                 * 
                 */
                private static final long serialVersionUID = 1L;

                @Override
                public boolean isEnabled() {
                    return ArkPermissionHelper.isActionPermitted(au.org.theark.core.Constants.NEW);
                }

                protected void onSubmit(AjaxRequestTarget target,
                        org.apache.wicket.markup.html.form.Form<?> form) {
                    onBatchAliquot(target, item.getModel());
                    target.add(feedbackPanel);
                };

                protected void onError(AjaxRequestTarget target,
                        org.apache.wicket.markup.html.form.Form<?> form) {
                    target.add(feedbackPanel);
                };

                public boolean isVisible() {
                    return (item.getModelObject().getQuantity() != null
                            && item.getModelObject().getQuantity() > 0);
                };

            }.setDefaultFormProcessing(false));

            item.add(new AjaxButton("allocateUnallocate") {
                private static final long serialVersionUID = 1L;

                @Override
                public boolean isEnabled() {
                    return ArkPermissionHelper.isActionPermitted(au.org.theark.core.Constants.EDIT);
                }

                @Override
                protected void onSubmit(AjaxRequestTarget target, Form<?> form) {

                    BiospecimenLocationVO biospecimenLocationVo = null;
                    try {
                        biospecimenLocationVo = iInventoryService.getBiospecimenLocation(biospecimen);
                    } catch (ArkSystemException e) {
                        // TODO Auto-generated catch block
                        e.printStackTrace();
                    }
                    if (biospecimenLocationVo.getIsAllocated()) {
                        //unallocate
                        InvCell invCell = iInventoryService.getInvCellByBiospecimen(biospecimen);
                        invCell.setBiospecimen(null);
                        invCell.setStatus("Empty");
                        iInventoryService.updateInvCell(invCell);

                        try {
                            cpModel.getObject()
                                    .setBiospecimenLocationVO(iInventoryService.getInvCellLocation(invCell));
                            cpModel.getObject().getBiospecimenLocationVO().setIsAllocated(false);
                            cpModel.getObject().setInvCell(invCell);
                        } catch (ArkSystemException e) {
                        }
                    } else {
                        //cpModel.getObject().setBiospecimen(biospecimen);
                        CompoundPropertyModel<LimsVO> cpm = new CompoundPropertyModel<LimsVO>(new LimsVO());
                        cpm.getObject().setBiospecimen(biospecimen);
                        modalContentPanel = new BioModalAllocateDetailPanel("content", modalWindow, cpm);

                        // Set the modalWindow title and content
                        modalWindow.setTitle("Biospecimen Allocation");
                        modalWindow.setContent(modalContentPanel);
                        modalWindow.setWidthUnit("%");
                        modalWindow.setInitialWidth(70);
                        modalWindow.show(target);
                        //cpModel.getObject().setBiospecimen(new Biospecimen());
                        modalWindow.repaintComponent(BiospecimenListForm.this);

                    }
                    target.add(BiospecimenListForm.this);
                }

                @Override
                protected void onError(AjaxRequestTarget target, Form<?> form) {
                }

            }.setDefaultFormProcessing(false));

            item.add(new AttributeModifier(Constants.CLASS, new AbstractReadOnlyModel() {

                private static final long serialVersionUID = 1L;

                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? Constants.EVEN : Constants.ODD;
                }
            }));
        }

    };

    return biospecimenDataView;
}

From source file:au.org.theark.lims.web.component.subjectlims.lims.biocollection.form.BioCollectionListForm.java

License:Open Source License

/**
 * /*from w w  w. jav  a  2s . c  om*/
 * @param iModel
 * @return the pageableListView of BioCollection
 */
public DataView<BioCollection> buildDataView(
        ArkDataProvider<BioCollection, ILimsService> bioCollectionProvider) {

    DataView<BioCollection> bioCollectionDataView = new DataView<BioCollection>("collectionList",
            bioCollectionProvider) {

        private static final long serialVersionUID = 1L;

        @Override
        protected void populateItem(final Item<BioCollection> item) {
            item.setOutputMarkupId(true);
            // DO NOT store the item.getModelObject! Checking it is ok...
            final BioCollection bioCollection = item.getModelObject();

            WebMarkupContainer rowDetailsWMC = new WebMarkupContainer("rowDetailsWMC", item.getModel());
            ArkBusyAjaxLink listDetailsLink = new ArkBusyAjaxLink("listDetailsLink") {

                private static final long serialVersionUID = 1L;

                @Override
                public void onClick(AjaxRequestTarget target) {
                    BioCollection bc = (BioCollection) (getParent().getDefaultModelObject());
                    CompoundPropertyModel<LimsVO> newModel = new CompoundPropertyModel<LimsVO>(new LimsVO());
                    newModel.getObject().getBioCollection().setId(bc.getId());
                    showModalWindow(target, newModel);
                }

            };

            SimpleDateFormat simpleDateFormat = new SimpleDateFormat(au.org.theark.core.Constants.DD_MM_YYYY);

            idLblFld = new Label("bioCollection.id", String.valueOf(bioCollection.getId()));
            biocollectionLblFld = new Label("bioCollection.biocollectionUid",
                    bioCollection.getBiocollectionUid());
            nameLblFld = new Label("bioCollection.name", bioCollection.getName());
            listDetailsLink.add(biocollectionLblFld);
            rowDetailsWMC.add(listDetailsLink);

            if (bioCollection.getCollectionDate() != null) {
                collectionDateLblFld = new Label("bioCollection.collectionDate",
                        simpleDateFormat.format(bioCollection.getCollectionDate()));
            } else {
                collectionDateLblFld = new Label("bioCollection.collectionDate", "");
            }

            if (bioCollection.getSurgeryDate() != null) {
                new Label("bioCollection.surgeryDate", simpleDateFormat.format(bioCollection.getSurgeryDate()));
            } else {
                new Label("bioCollection.surgeryDate", "");
            }

            commentsLblFld = new Label("bioCollection.comments", bioCollection.getComments());

            item.add(idLblFld);
            item.add(rowDetailsWMC);
            item.add(nameLblFld);
            item.add(collectionDateLblFld);
            item.add(commentsLblFld);

            item.add(new AttributeModifier(Constants.CLASS, new AbstractReadOnlyModel() {

                private static final long serialVersionUID = 1L;

                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? Constants.EVEN : Constants.ODD;
                }
            }));
        }

    };

    return bioCollectionDataView;
}

From source file:au.org.theark.lims.web.component.subjectlims.lims.biospecimen.form.BiospecimenListForm.java

License:Open Source License

/**
 * /*from   w w w  .j  a  v  a2 s  .c o m*/
 * @param iModel
 * @return the pageableListView of BioCollection
 */
public DataView<Biospecimen> buildDataView(ArkDataProvider2<LimsVO, Biospecimen> biospecimenProvider) {

    DataView<Biospecimen> biospecimenDataView = new DataView<Biospecimen>("biospecimenList",
            biospecimenProvider) {

        private static final long serialVersionUID = 1L;

        @Override
        protected void populateItem(final Item<Biospecimen> item) {
            item.setOutputMarkupId(true);
            // DO NOT store the item.getModelObject! Checking it is ok...
            final Biospecimen biospecimen = item.getModelObject();

            WebMarkupContainer rowDetailsWMC = new WebMarkupContainer("rowDetailsWMC", item.getModel());
            ArkBusyAjaxLink listDetailsLink = new ArkBusyAjaxLink("listDetailsLink") {

                private static final long serialVersionUID = 1L;

                @Override
                public void onClick(AjaxRequestTarget target) {
                    CompoundPropertyModel<LimsVO> newModel = new CompoundPropertyModel<LimsVO>(new LimsVO());
                    try {
                        Biospecimen biospecimenFromDB = iLimsService.getBiospecimen(biospecimen.getId());
                        newModel.getObject().setBiospecimen(biospecimenFromDB);
                        newModel.getObject().setBioCollection(biospecimenFromDB.getBioCollection());
                        newModel.getObject().setTreeModel(cpModel.getObject().getTreeModel());
                        showModalWindow(target, newModel);
                    } catch (EntityNotFoundException e) {
                        log.error(e.getMessage());
                    }
                }
            };

            idLblFld = new Label("biospecimen.id", String.valueOf(biospecimen.getId()));

            nameLblFld = new Label("biospecimen.biospecimenUid", biospecimen.getBiospecimenUid());
            listDetailsLink.add(nameLblFld);
            rowDetailsWMC.add(listDetailsLink);

            studyLblFld = new Label("biospecimen.study.name", biospecimen.getStudy().getName());
            sampleTypeLblFld = new Label("biospecimen.sampleType.name", biospecimen.getSampleType().getName());
            collectionLblFld = new Label("biospecimen.bioCollection.biocollectionUid",
                    biospecimen.getBioCollection().getBiocollectionUid());
            commentsLblFld = new Label("biospecimen.comments", biospecimen.getComments());

            biospecimen.setQuantity(iLimsService.getQuantityAvailable(biospecimen));
            if (biospecimen.getQuantity() == null) {
                quantityLblFld = new Label("biospecimen.quantity", "0");
            } else {
                quantityLblFld = new Label("biospecimen.quantity", biospecimen.getQuantity().toString());
            }
            if (biospecimen.getUnit() == null) {
                unitsLblFld = new Label("biospecimen.unit", "");
            } else {
                unitsLblFld = new Label("biospecimen.unit", biospecimen.getUnit().getName());
            }

            try {
                locationLbl = new Label("biospecimen.location", "view");
                locationLink = new ArkBusyAjaxLink("biospecimen.location.link") {

                    /**
                     * 
                     */
                    private static final long serialVersionUID = 1L;

                    @Override
                    public void onClick(AjaxRequestTarget target) {
                        CompoundPropertyModel<LimsVO> newModel = new CompoundPropertyModel<LimsVO>(
                                new LimsVO());
                        newModel.getObject().getBiospecimen().setId(biospecimen.getId());
                        BiospecimenLocationVO biospecimenLocationVo;
                        try {
                            biospecimenLocationVo = iInventoryService.getBiospecimenLocation(biospecimen);
                            newModel.getObject().setBiospecimenLocationVO(biospecimenLocationVo);
                            newModel.getObject().setTreeModel(cpModel.getObject().getTreeModel());
                            BioLocationPanel bioLocationPanel = new BioLocationPanel("content", newModel) {
                                /**
                                 * 
                                 */
                                private static final long serialVersionUID = 1L;

                                @Override
                                public void refreshParentPanel(AjaxRequestTarget target) {
                                }
                            };
                            bioLocationPanel.getUnallocateButton().setVisible(false);
                            bioLocationPanel.add(new AttributeModifier("class", "detailsPanelBorder"));
                            // Set the modalWindow title and content
                            modalWindow.setTitle("Biospecimen Location Detail");
                            modalWindow.setContent(bioLocationPanel);
                            modalWindow.show(target);
                        } catch (ArkSystemException e) {
                            log.error(e.getMessage());
                        }
                    }
                };

                locationLink.add(locationLbl);

                BiospecimenLocationVO biospecimenLocationVo = iInventoryService
                        .getBiospecimenLocation(biospecimen);
                if (!biospecimenLocationVo.getIsAllocated()) {
                    locationLink.setVisible(false);
                }
            } catch (ArkSystemException e) {
                log.error(e.getMessage());
            }

            item.add(idLblFld);
            item.add(rowDetailsWMC);
            item.add(studyLblFld);
            item.add(sampleTypeLblFld);
            item.add(collectionLblFld);
            //item.add(commentsLblFld);
            item.add(quantityLblFld);
            item.add(unitsLblFld);
            item.add(locationLink);

            if (biospecimen.getBarcoded()) {
                item.addOrReplace(
                        new ContextImage("biospecimen.barcoded", new Model<String>("images/icons/tick.png")));
            } else {
                item.addOrReplace(
                        new ContextImage("biospecimen.barcoded", new Model<String>("images/icons/cross.png")));
            }

            item.add(new AjaxButton("batchAliquot") {

                /**
                 * 
                 */
                private static final long serialVersionUID = 1L;

                @Override
                public boolean isEnabled() {
                    return ArkPermissionHelper.isActionPermitted(au.org.theark.core.Constants.NEW);
                }

                protected void onSubmit(AjaxRequestTarget target,
                        org.apache.wicket.markup.html.form.Form<?> form) {
                    onBatchAliquot(target, item.getModel());
                    target.add(feedbackPanel);
                };

                protected void onError(AjaxRequestTarget target,
                        org.apache.wicket.markup.html.form.Form<?> form) {
                    target.add(feedbackPanel);
                };

                public boolean isVisible() {
                    SecurityManager securityManager = ThreadContext.getSecurityManager();
                    Subject currentUser = SecurityUtils.getSubject();
                    boolean canCreate = ArkPermissionHelper.hasNewPermission(securityManager, currentUser);
                    boolean validQuantity = (item.getModelObject().getQuantity() != null
                            && item.getModelObject().getQuantity() > 0);
                    return (canCreate && validQuantity);
                };

            }.setDefaultFormProcessing(false));

            item.add(new AjaxButton("allocateUnallocate") {
                private static final long serialVersionUID = 1L;

                @Override
                public boolean isEnabled() {
                    return ArkPermissionHelper.isActionPermitted(au.org.theark.core.Constants.EDIT);
                }

                @Override
                protected void onSubmit(AjaxRequestTarget target, Form<?> form) {

                    BiospecimenLocationVO biospecimenLocationVo = null;
                    try {
                        biospecimenLocationVo = iInventoryService.getBiospecimenLocation(biospecimen);
                    } catch (ArkSystemException e) {
                        // TODO Auto-generated catch block
                        e.printStackTrace();
                    }
                    if (biospecimenLocationVo.getIsAllocated()) {
                        //unallocate
                        InvCell invCell = iInventoryService.getInvCellByBiospecimen(biospecimen);
                        invCell.setBiospecimen(null);
                        invCell.setStatus("Empty");
                        iInventoryService.updateInvCell(invCell);

                        try {
                            cpModel.getObject()
                                    .setBiospecimenLocationVO(iInventoryService.getInvCellLocation(invCell));
                            cpModel.getObject().getBiospecimenLocationVO().setIsAllocated(false);
                            cpModel.getObject().setInvCell(invCell);
                        } catch (ArkSystemException e) {
                        }
                    } else {
                        //cpModel.getObject().setBiospecimen(biospecimen);
                        CompoundPropertyModel<LimsVO> cpm = new CompoundPropertyModel<LimsVO>(new LimsVO());
                        cpm.getObject().setBiospecimen(biospecimen);
                        modalContentPanel = new BioModalAllocateDetailPanel("content", modalWindow, cpm);

                        // Set the modalWindow title and content
                        modalWindow.setTitle("Biospecimen Allocation");
                        modalWindow.setContent(modalContentPanel);
                        modalWindow.setWidthUnit("%");
                        modalWindow.setInitialWidth(70);
                        modalWindow.show(target);
                        //cpModel.getObject().setBiospecimen(new Biospecimen());
                        modalWindow.repaintComponent(BiospecimenListForm.this);

                    }
                    target.add(BiospecimenListForm.this);
                }

                @Override
                protected void onError(AjaxRequestTarget target, Form<?> form) {
                }

            }.setDefaultFormProcessing(false).setOutputMarkupPlaceholderTag(true));

            item.add(new AttributeModifier(Constants.CLASS, new AbstractReadOnlyModel() {

                private static final long serialVersionUID = 1L;

                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? Constants.EVEN : Constants.ODD;
                }
            }));
        }

    };

    return biospecimenDataView;
}

From source file:au.org.theark.lims.web.component.subjectlims.lims.LimsContainerPanel.java

License:Open Source License

private IModel<Set<Object>> newStateModel() {
    return new AbstractReadOnlyModel<Set<Object>>() {
        private static final long serialVersionUID = 1L;

        @Override/*from www  . j ava 2s .  c om*/
        public Set<Object> getObject() {
            return state;
        }

        @Override
        public void detach() {
            ((IDetachable) state).detach();
        }
    };
}

From source file:au.org.theark.lims.web.component.subjectlims.subject.SearchResultListPanel.java

License:Open Source License

public DataView<LinkSubjectStudy> buildDataView(ArkDataProvider2<LimsVO, LinkSubjectStudy> subjectProvider) {

    DataView<LinkSubjectStudy> linkSubjectStudyDataView = new DataView<LinkSubjectStudy>("subjectList",
            subjectProvider) {/*from ww w .j a  va 2s .  co m*/

        @Override
        protected void populateItem(final Item<LinkSubjectStudy> item) {
            LinkSubjectStudy subject = item.getModelObject();
            item.add(buildLink(item.getModelObject()));

            Label studyLbl = new Label("studyLbl", subject.getStudy().getName());
            item.add(studyLbl);

            StringBuffer sb = new StringBuffer();
            String firstName = subject.getPerson().getFirstName();
            String midName = subject.getPerson().getMiddleName();
            String lastName = subject.getPerson().getLastName();

            if (firstName != null) {
                sb.append(subject.getPerson().getFirstName());
                sb.append(" ");
            }
            if (midName != null) {
                sb.append(subject.getPerson().getMiddleName());
                sb.append(" ");
            }
            if (lastName != null) {
                sb.append(subject.getPerson().getLastName());
            }

            item.add(new Label(Constants.SUBJECT_FULL_NAME, sb.toString()));

            item.add(new Label("person.genderType.name", subject.getPerson().getGenderType().getName()));

            SimpleDateFormat simpleDateFormat = new SimpleDateFormat(au.org.theark.core.Constants.DD_MM_YYYY);
            String dateOfBirth = "";
            if (subject != null && subject.getPerson() != null
                    && subject.getPerson().getDateOfBirth() != null) {
                dateOfBirth = simpleDateFormat.format(subject.getPerson().getDateOfBirth());
                item.add(new Label("person.dateOfBirth", dateOfBirth));
            } else {
                item.add(new Label("person.dateOfBirth", ""));
            }

            item.add(
                    new Label("person.vitalStatus.statusName", subject.getPerson().getVitalStatus().getName()));

            if (subject.getConsentStatus() != null) {
                item.add(new Label("consentStatus.name", subject.getConsentStatus().getName()));
            } else {
                item.add(new Label("consentStatus.name", ""));
            }

            item.add(new AttributeModifier(Constants.CLASS, new AbstractReadOnlyModel() {
                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? Constants.EVEN : Constants.ODD;
                }
            }));
        }
    };
    return linkSubjectStudyDataView;
}

From source file:au.org.theark.phenotypic.web.component.phenodatacategory.SearchResultListPanel.java

License:Open Source License

public DataView<PhenoDataSetCategory> buildDataView(
        ArkDataProvider2<PhenoDataSetCategory, PhenoDataSetCategory> subjectProvider) {

    DataView<PhenoDataSetCategory> phenoDataSetCategoryDataView = new DataView<PhenoDataSetCategory>(
            "phenoDataSetCategoryList", subjectProvider) {
        @Override//from  w w w.j a v a  2 s .  c  om
        protected void populateItem(final Item<PhenoDataSetCategory> item) {
            PhenoDataSetCategory category = item.getModelObject();
            //id
            if (category.getId() != null) {
                item.add(new Label(Constants.PHENODATASETCATEGORY_ID, category.getId().toString()));
            } else {
                item.add(new Label(Constants.PHENODATASETCATEGORY_ID, ""));
            }
            // Component Name Link
            item.add(buildLinkWMC(item));

            // Description
            if (category.getDescription() != null) {
                item.add(new Label(Constants.PHENODATASETCATEGORY_DESCRIPTION, category.getDescription()));
            } else {
                item.add(new Label(Constants.PHENODATASETCATEGORY_DESCRIPTION, ""));
            }
            /* For the alternative stripes */
            item.add(new AttributeModifier("class", new AbstractReadOnlyModel() {
                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? "even" : "odd";
                }
            }));

        }
    };

    addToolbars(phenoDataSetCategoryDataView);

    return phenoDataSetCategoryDataView;
}

From source file:au.org.theark.phenotypic.web.component.phenodatadictionary.SearchResultListPanel.java

License:Open Source License

public DataView<PhenoDataSetField> buildDataView(
        ArkDataProvider2<PhenoDataSetField, PhenoDataSetField> subjectProvider) {

    DataView<PhenoDataSetField> phonoFieldDataView = new DataView<PhenoDataSetField>("phenoDataSetFieldLst",
            subjectProvider) {/*www.ja  va 2s.  c  om*/

        @Override
        protected void populateItem(final Item<PhenoDataSetField> item) {
            PhenoDataSetField field = item.getModelObject();

            if (field.getId() != null) {
                // Add the id component here
                item.add(new Label(Constants.PHENODATASET_ID, field.getId().toString()));
            } else {
                item.add(new Label(Constants.PHENODATASET_ID, ""));
            }
            // Component Name Link
            item.add(buildLinkWMC(item));
            // Field Type
            if (field.getFieldType() != null) {
                item.add(new Label(Constants.PHENODATASET_FIELD_TYPE, field.getFieldType().getName()));
            } else {
                item.add(new Label(Constants.PHENODATASET_FIELD_TYPE, ""));
            }
            // Field Label
            if (field.getFieldLabel() != null) {
                item.add(new Label(Constants.PHENODATASET_FIELD_LABEL, field.getFieldLabel()));
            } else {
                item.add(new Label(Constants.PHENODATASET_FIELD_LABEL, ""));
            }
            if (field.getDefaultValue() != null) {
                item.add(new Label(Constants.PHENODATASET_DEFAULT_VALUE, field.getDefaultValue()));
            } else {
                item.add(new Label(Constants.PHENODATASET_DEFAULT_VALUE, ""));
            }
            if (field.getMissingValue() != null) {
                item.add(new Label(Constants.PHENODATASET_MISSING_VALUE, field.getMissingValue()));
            } else {
                item.add(new Label(Constants.PHENODATASET_MISSING_VALUE, ""));
            }
            if (field.getRequired() != null && field.getRequired() == true) {
                item.add(new ContextImage(Constants.PHENODATASET_REQUIRED,
                        new Model<String>("images/icons/tick.png")));
            } else {
                item.add(new ContextImage(Constants.PHENODATASET_REQUIRED,
                        new Model<String>("images/icons/cross.png")));
            }

            /* For the alternative stripes */
            item.add(new AttributeModifier("class", new AbstractReadOnlyModel() {
                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? "even" : "odd";
                }
            }));

        }
    };

    addToolbars(phonoFieldDataView);

    return phonoFieldDataView;
}