Example usage for org.dom4j.io XMLWriter close

List of usage examples for org.dom4j.io XMLWriter close

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Introduction

In this page you can find the example usage for org.dom4j.io XMLWriter close.

Prototype

public void close() throws IOException

Source Link

Document

Closes the underlying Writer

Usage

From source file:InitializeDB.java

License:Open Source License

public static void clearEntryWithVulsoft(String filename) {

    try {//from   w  ww. j  a va  2 s. co  m

        SAXReader saxReader = new SAXReader();

        Document document = saxReader.read(filename);

        List soft = document

                .selectNodes("/*[local-name(.)='nvd']/*[local-name(.)='entry']/*[local-name(.)='vuln_soft']");

        Iterator sft = soft.iterator();

        Element nvd = (Element) document

                .selectSingleNode("/*[local-name(.)='nvd']");

        while (sft.hasNext()) {

            Element vsft = (Element) sft.next();

            nvd.remove(vsft.getParent());

            XMLWriter output = new XMLWriter(new FileWriter(filename));//

            output.write(document);

            output.flush();

            output.close();

        }

    } catch (Exception e) {

        e.printStackTrace();

    }

}

From source file:Main2.java

License:Open Source License

public static void main(String[] args) throws IOException {
    boolean printTokens = false;
    boolean showTree = false;
    boolean produceXml = false;
    boolean produceSource = false;
    for (int i = 2; i < args.length; i++) {
        if (args[i].length() == 2) {
            switch (args[i].charAt(1)) {
            case 't':
                printTokens = true;//from  w ww. j  a  va  2  s. c om
                break;
            case 'v':
                showTree = true;
                break;
            case 'x':
                produceXml = true;
                break;
            case 's':
                produceSource = true;
                break;
            }
        }
    }
    ASTWindow window = showTree ? new ASTWindow("AST") : null;
    Document doc = null;
    if (produceXml) {
        doc = DocumentHelper.createDocument(DocumentHelper.createElement("asp"));
    }
    try {
        File f = new File(args[0]);
        File base = new File(args[1]);
        if (printTokens) {
            AspStreamSelector selector = new AspStreamSelector(f, base);
            printApsTokens(selector);
            if (!(showTree || produceXml)) {
                return;
            }
        }
        AspParser asp = new AspParser(base, new File("out"));
        asp.setGenerateCode(produceSource);
        Map vbTokens = null;
        Map jsTokens = null;
        Map tokens = null;
        List astList = asp.parseFile(f, true);
        for (Iterator it = astList.iterator(); it.hasNext();) {
            Object[] val = (Object[]) it.next();
            boolean isVb = ((Boolean) val[0]).booleanValue();
            if (showTree) {
                if (isVb) {
                    window.addAST("Original VB", createRoot("VB ASP", (AST) val[1]));
                    if (val.length > 2) {
                        window.addAST("VB Generated", createRoot("VB", (AST) val[2]));
                    }
                } else {
                    window.addAST("ASP JS", createRoot("JS", (AST) val[1]));
                    window.addAST("JS Generated", createRoot("JS", (AST) val[2]));
                }
            }
            if (produceXml) {
                String rootName;
                if (isVb) {
                    rootName = "vb";
                    if (vbTokens == null) {
                        vbTokens = new HashMap();
                        putTokens(new VbsTree(), vbTokens);
                    }
                    tokens = vbTokens;
                } else {
                    rootName = "js";
                    if (jsTokens == null) {
                        jsTokens = new HashMap();
                        putTokens(new JsTree(), jsTokens);
                    }
                    tokens = jsTokens;
                }
                Element nodeEl = doc.getRootElement().addElement(rootName);
                Element orig = nodeEl.addElement("original");
                new XmlTestBuilder(orig, tokens).visit((AST) val[1]);
                Element trans = nodeEl.addElement("translated");
                new XmlTestBuilder(trans, tokens).visit((AST) val[2]);
            }
        }
        if (produceXml) {
            OutputFormat of = OutputFormat.createPrettyPrint();
            of.setEncoding("ISO-8859-7");
            XMLWriter xwriter = new XMLWriter(new FileWriter("asp.xml"), of);
            xwriter.write(doc);
            xwriter.close();
        }
        if (showTree && window.hasAST()) {
            window.pack();
            window.setVisible(true);
            window.setExtendedState(Frame.MAXIMIZED_BOTH);
        }
    } catch (Exception ex) {
        ex.printStackTrace(System.out);
        System.err.println("Error");
    }
}

From source file:adr.main.AlcorAdrSettings.java

/**
 * ? ?? ?  .xml /*from   w w  w. ja v  a 2  s .c  o m*/
 */
public void SaveSettings() {
    try {
        Document document = DocumentHelper.createDocument();
        Element root = document.addElement("Settings");

        root.addElement("COM_Port").addText(m_pCOMPortSettings.GetPort());

        root.addElement("COM_Baudrate").addText(Integer.toString(m_pCOMPortSettings.GetBaudRate()));

        if (m_pCOMPortSettings.GetDataBits() == SerialPort.DATABITS_5)
            root.addElement("COM_DataBits").addText("5");
        else if (m_pCOMPortSettings.GetDataBits() == SerialPort.DATABITS_6)
            root.addElement("COM_DataBits").addText("6");
        else if (m_pCOMPortSettings.GetDataBits() == SerialPort.DATABITS_7)
            root.addElement("COM_DataBits").addText("7");
        else if (m_pCOMPortSettings.GetDataBits() == SerialPort.DATABITS_8)
            root.addElement("COM_DataBits").addText("8");
        else {
            logger.warn(
                    "Unknown COM_DataBits value '" + m_pCOMPortSettings.GetDataBits() + "'! Saving default!");
            root.addElement("COM_DataBits").addText("8");
        }

        switch (m_pCOMPortSettings.GetParity()) {
        case SerialPort.PARITY_NONE:
            root.addElement("COM_Parity").addText("None");
            break;
        case SerialPort.PARITY_ODD:
            root.addElement("COM_Parity").addText("Odd");
            break;
        case SerialPort.PARITY_EVEN:
            root.addElement("COM_Parity").addText("Even");
            break;
        case SerialPort.PARITY_MARK:
            root.addElement("COM_Parity").addText("Mark");
            break;
        case SerialPort.PARITY_SPACE:
            root.addElement("COM_Parity").addText("Space");
            break;
        default:
            logger.warn("Unknown COM_Parity value '" + m_pCOMPortSettings.GetParity() + "'! Saving default!");
            root.addElement("COM_Parity").addText("None");
            break;
        }

        switch (m_pCOMPortSettings.GetStopBits()) {
        case SerialPort.STOPBITS_1:
            root.addElement("COM_StopBits").addText("1");
            break;
        case SerialPort.STOPBITS_2:
            root.addElement("COM_StopBits").addText("2");
            break;
        default:
            logger.warn(
                    "Unknown COM_StopBits value '" + m_pCOMPortSettings.GetStopBits() + "'! Saving default!");
            root.addElement("COM_StopBits").addText("1");
            break;
        }

        OutputFormat format = OutputFormat.createPrettyPrint();

        //TODO
        String strSettingsXmlFile = "alcor.adr.settings.xml";//System.getenv( "AMS_ROOT") + "/etc/settings.ams.xml";

        XMLWriter writer = new XMLWriter(new FileWriter(strSettingsXmlFile), format);

        writer.write(document);
        writer.close();
    } catch (IOException ex) {
        logger.error("IOException caught while saving settings!", ex);
    }
}

From source file:ams.AMSDevSerialNumbers.java

/**
 * Saves entered numbers to XML file//  ww w .  j  a  va  2 s  .  c  om
 */
public void SaveDevNumsToXML() {
    try {
        Document document = DocumentHelper.createDocument();
        Element root = document.addElement("Settings");
        root.addElement("Device1").addText(m_strDev1SerialNumber);
        root.addElement("Device2").addText(m_strDev2SerialNumber);
        root.addElement("Device3").addText(m_strDev3SerialNumber);
        root.addElement("Device4").addText(m_strDev4SerialNumber);
        root.addElement("Device5").addText(m_strDev5SerialNumber);
        root.addElement("Device6").addText(m_strDev6SerialNumber);
        root.addElement("Device7").addText(m_strDev7SerialNumber);
        root.addElement("Device8").addText(m_strDev8SerialNumber);

        OutputFormat format = OutputFormat.createPrettyPrint();
        String strSerialsXmlFile = System.getenv("AMS_ROOT") + "/serials.xml";
        XMLWriter writer = new XMLWriter(new FileWriter(strSerialsXmlFile), format);
        writer.write(document);
        writer.close();

    } catch (IOException ex) {
        logger.error("IOException caught while saving serials!", ex);
    }
}

From source file:ams.AMSSettings.java

/**
 * ? ?? ?  .xml /*from   w  ww  .j  av a2 s  .  co m*/
 */
public void SaveSettings() {
    try {
        Document document = DocumentHelper.createDocument();
        Element root = document.addElement("Settings");

        root.addElement("COM_Port").addText(m_pCOMPortSettings.GetPort());

        root.addElement("COM_Baudrate").addText(Integer.toString(m_pCOMPortSettings.GetBaudRate()));

        if (m_pCOMPortSettings.GetDataBits() == SerialPort.DATABITS_5)
            root.addElement("COM_DataBits").addText("5");
        else if (m_pCOMPortSettings.GetDataBits() == SerialPort.DATABITS_6)
            root.addElement("COM_DataBits").addText("6");
        else if (m_pCOMPortSettings.GetDataBits() == SerialPort.DATABITS_7)
            root.addElement("COM_DataBits").addText("7");
        else if (m_pCOMPortSettings.GetDataBits() == SerialPort.DATABITS_8)
            root.addElement("COM_DataBits").addText("8");
        else {
            logger.warn(
                    "Unknown COM_DataBits value '" + m_pCOMPortSettings.GetDataBits() + "'! Saving default!");
            root.addElement("COM_DataBits").addText("8");
        }

        switch (m_pCOMPortSettings.GetParity()) {
        case SerialPort.PARITY_NONE:
            root.addElement("COM_Parity").addText("None");
            break;
        case SerialPort.PARITY_ODD:
            root.addElement("COM_Parity").addText("Odd");
            break;
        case SerialPort.PARITY_EVEN:
            root.addElement("COM_Parity").addText("Even");
            break;
        case SerialPort.PARITY_MARK:
            root.addElement("COM_Parity").addText("Mark");
            break;
        case SerialPort.PARITY_SPACE:
            root.addElement("COM_Parity").addText("Space");
            break;
        default:
            logger.warn("Unknown COM_Parity value '" + m_pCOMPortSettings.GetParity() + "'! Saving default!");
            root.addElement("COM_Parity").addText("None");
            break;
        }

        switch (m_pCOMPortSettings.GetStopBits()) {
        case SerialPort.STOPBITS_1:
            root.addElement("COM_StopBits").addText("1");
            break;
        case SerialPort.STOPBITS_2:
            root.addElement("COM_StopBits").addText("2");
            break;
        default:
            logger.warn(
                    "Unknown COM_StopBits value '" + m_pCOMPortSettings.GetStopBits() + "'! Saving default!");
            root.addElement("COM_StopBits").addText("1");
            break;
        }

        Element adams = root.addElement("Devices");
        adams.addElement("ADC1").addText(m_strADC1Address);
        adams.addElement("ADC2").addText(m_strADC2Address);
        adams.addElement("DAC1").addText(m_strDAC1Address);
        adams.addElement("DAC2").addText(m_strDAC2Address);
        adams.addElement("REL1").addText(m_strREL1Address);
        adams.addElement("ADC3").addText(m_strADC3Address);
        adams.addElement("ADC4").addText(m_strADC4Address);
        adams.addElement("DAC3").addText(m_strDAC3Address);
        adams.addElement("DAC4").addText(m_strDAC4Address);
        adams.addElement("REL2").addText(m_strREL2Address);

        // ***** ***** ***** ***** *****
        //
        //Iterator it = AMSConstants.getInstance().T_DEVICES.iterator();
        //while( it.hasNext()) {            
        for (int nDevice = AMSConstants.T_DEVICE1; nDevice <= AMSConstants.T_DEVICE8; nDevice++) {

            //int nDevice = ( int) it.next();

            Element device = root.addElement("Device" + nDevice + "_channels");
            Element devAn = device.addElement("anode");
            devAn.addElement("ADC_V_DEV")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetAnoAdcVoltDev());
            devAn.addElement("ADC_V_CHAN")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetAnoAdcVoltChan());

            devAn.addElement("ADC_C_DEV")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetAnoAdcCurrDev());
            devAn.addElement("ADC_C_CHAN")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetAnoAdcCurrChan());

            devAn.addElement("DAC_DEV").addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetAnoDacDev());
            devAn.addElement("DAC_CHAN")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetAnoDacChan());

            devAn.addElement("REL_DEV").addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetAnoRelDev());
            devAn.addElement("REL_CHAN")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetAnoRelChan());

            Element devTu = device.addElement("tubulation");
            devTu.addElement("ADC_V_DEV")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetTubAdcVoltDev());
            devTu.addElement("ADC_V_CHAN")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetTubAdcVoltChan());

            devTu.addElement("ADC_C_DEV")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetTubAdcCurrDev());
            devTu.addElement("ADC_C_CHAN")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetTubAdcCurrChan());

            devTu.addElement("DAC_DEV").addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetTubDacDev());
            devTu.addElement("DAC_CHAN")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetTubDacChan());

            devTu.addElement("REL_DEV").addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetTubRelDev());
            devTu.addElement("REL_CHAN")
                    .addText("" + ((AMSSettingsTDev) m_mapDevs.get(nDevice)).GetTubRelChan());

        }

        OutputFormat format = OutputFormat.createPrettyPrint();
        String strSettingsXmlFile = System.getenv("AMS_ROOT") + "/settings.xml";
        XMLWriter writer = new XMLWriter(new FileWriter(strSettingsXmlFile), format);

        writer.write(document);
        writer.close();
    } catch (IOException ex) {
        logger.error("IOException caught while saving settings!", ex);
    }
}

From source file:ams.devices.AMSCalibration.java

public void SaveCalibration() {
    try {/*from  w w w  .ja  v  a  2  s .  co  m*/
        Document document = DocumentHelper.createDocument();
        Element root = document.addElement("Calibration");

        AMSCalibrationUnit unit = (AMSCalibrationUnit) m_mapCalibrationUnits.get(AMSConstants.ADC1);
        Element anodes = root.addElement("ADC1");
        anodes.addElement("ADC1_0_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL1)));
        anodes.addElement("ADC1_0_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL1)));
        anodes.addElement("ADC1_1_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL2)));
        anodes.addElement("ADC1_1_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL2)));
        anodes.addElement("ADC1_2_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL3)));
        anodes.addElement("ADC1_2_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL3)));
        anodes.addElement("ADC1_3_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL4)));
        anodes.addElement("ADC1_3_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL4)));
        anodes.addElement("ADC1_4_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL5)));
        anodes.addElement("ADC1_4_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL5)));
        anodes.addElement("ADC1_5_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL6)));
        anodes.addElement("ADC1_5_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL6)));
        anodes.addElement("ADC1_6_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL7)));
        anodes.addElement("ADC1_6_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL7)));
        anodes.addElement("ADC1_7_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL8)));
        anodes.addElement("ADC1_7_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL8)));

        unit = (AMSCalibrationUnit) m_mapCalibrationUnits.get(AMSConstants.ADC2);
        anodes = root.addElement("ADC2");
        anodes.addElement("ADC2_0_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL1)));
        anodes.addElement("ADC2_0_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL1)));
        anodes.addElement("ADC2_1_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL2)));
        anodes.addElement("ADC2_1_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL2)));
        anodes.addElement("ADC2_2_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL3)));
        anodes.addElement("ADC2_2_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL3)));
        anodes.addElement("ADC2_3_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL4)));
        anodes.addElement("ADC2_3_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL4)));
        anodes.addElement("ADC2_4_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL5)));
        anodes.addElement("ADC2_4_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL5)));
        anodes.addElement("ADC2_5_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL6)));
        anodes.addElement("ADC2_5_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL6)));
        anodes.addElement("ADC2_6_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL7)));
        anodes.addElement("ADC2_6_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL7)));
        anodes.addElement("ADC2_7_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL8)));
        anodes.addElement("ADC2_7_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL8)));

        unit = (AMSCalibrationUnit) m_mapCalibrationUnits.get(AMSConstants.ADC3);
        anodes = root.addElement("ADC3");
        anodes.addElement("ADC3_0_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL1)));
        anodes.addElement("ADC3_0_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL1)));
        anodes.addElement("ADC3_1_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL2)));
        anodes.addElement("ADC3_1_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL2)));
        anodes.addElement("ADC3_2_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL3)));
        anodes.addElement("ADC3_2_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL3)));
        anodes.addElement("ADC3_3_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL4)));
        anodes.addElement("ADC3_3_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL4)));
        anodes.addElement("ADC3_4_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL5)));
        anodes.addElement("ADC3_4_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL5)));
        anodes.addElement("ADC3_5_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL6)));
        anodes.addElement("ADC3_5_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL6)));
        anodes.addElement("ADC3_6_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL7)));
        anodes.addElement("ADC3_6_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL7)));
        anodes.addElement("ADC3_7_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL8)));
        anodes.addElement("ADC3_7_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL8)));

        unit = (AMSCalibrationUnit) m_mapCalibrationUnits.get(AMSConstants.ADC4);
        anodes = root.addElement("ADC4");
        anodes.addElement("ADC4_0_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL1)));
        anodes.addElement("ADC4_0_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL1)));
        anodes.addElement("ADC4_1_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL2)));
        anodes.addElement("ADC4_1_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL2)));
        anodes.addElement("ADC4_2_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL3)));
        anodes.addElement("ADC4_2_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL3)));
        anodes.addElement("ADC4_3_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL4)));
        anodes.addElement("ADC4_3_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL4)));
        anodes.addElement("ADC4_4_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL5)));
        anodes.addElement("ADC4_4_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL5)));
        anodes.addElement("ADC4_5_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL6)));
        anodes.addElement("ADC4_5_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL6)));
        anodes.addElement("ADC4_6_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL7)));
        anodes.addElement("ADC4_6_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL7)));
        anodes.addElement("ADC4_7_A").addText(String.format("%.3f", unit.GetSlope(AMSConstants.CHANNEL8)));
        anodes.addElement("ADC4_7_B").addText(String.format("%.3f", unit.GetShift(AMSConstants.CHANNEL8)));

        OutputFormat format = OutputFormat.createPrettyPrint();
        String strCalibrationFilePathName = System.getenv("AMS_ROOT") + "/calibration.xml";
        XMLWriter writer = new XMLWriter(new FileWriter(strCalibrationFilePathName), format);

        writer.write(document);
        writer.close();
    } catch (IOException ex) {
        logger.error("IOException caught while saving calibration!", ex);
    }
}

From source file:be.hikage.maven.plugin.xmlmerge.MergeXmlMojo.java

License:Apache License

private void writeMergedXml(File baseFile, Document base, StringBuilder prologHeader) throws IOException {
    FileOutputStream fos = new FileOutputStream(baseFile);

    if (processProlog && prologHeader != null && StringUtils.isNotEmpty(prologHeader.toString())) {
        fos.write(prologHeader.toString().getBytes());
    }//from w w w  .  jav a  2  s .co  m

    OutputFormat format = OutputFormat.createPrettyPrint();
    format.setSuppressDeclaration(true);
    format.setNewLineAfterDeclaration(false);
    XMLWriter writer = new XMLWriter(fos, format);
    writer.write(base);
    writer.flush();
    writer.close();

}

From source file:BlastResultXMLsplit.BlastXMLsplit.java

public BlastXMLsplit(String filepath, int seqnumber)
        throws FileNotFoundException, IOException, ParserConfigurationException {
    SAXReader reader = new SAXReader();
    reader.setValidation(false);// w ww . jav  a2s. co m
    try {
        System.out.println("Xlmfile reading");
        Document document = reader.read(new FileInputStream(filepath));//XMLdocument?
        System.out.println("Xlmfile read done!");
        org.dom4j.DocumentFactory DocumentFactory = new org.dom4j.DocumentFactory();

        ArrayList str = new ArrayList();//??? 

        String fileoutpath;

        org.dom4j.Element rootElm = document.getRootElement();//
        File f = new File(filepath);
        int count = 1;
        List<org.dom4j.Element> blastOutput_iterations = rootElm.element("BlastOutput_iterations").elements();//?
        org.dom4j.Element BlastOutput_program = rootElm.element("BlastOutput_program");
        org.dom4j.Element BlastOutput_version = rootElm.element("BlastOutput_version");
        org.dom4j.Element BlastOutput_reference = rootElm.element("BlastOutput_reference");
        org.dom4j.Element BlastOutput_db = rootElm.element("BlastOutput_db");
        //?
        BlastOutput_program.getParent().remove(BlastOutput_program);
        BlastOutput_version.getParent().remove(BlastOutput_version);
        BlastOutput_reference.getParent().remove(BlastOutput_reference);
        BlastOutput_db.getParent().remove(BlastOutput_db);
        // org.dom4j.Element BlastOutput_query_def=rootElm.element("BlastOutput_query-def");
        //org.dom4j.Element BBlastOutput_query_len=rootElm.element("BlastOutput_query-len");

        org.dom4j.Element BlastOutput_param = rootElm.element("BlastOutput_param");
        rootElm.remove(BlastOutput_param);

        String Iteration_queryIDstr, Iteration_queryDefstr, Iteration_query_len;
        List<org.dom4j.Element> Iterationlist = null;
        int size = blastOutput_iterations.size();
        System.out.println("Your query seqcount is " + size + "\r\n Start dividing your file");
        for (int i = 0; i < size; i = i + seqnumber) {
            //??
            fileoutpath = f.getParent() + System.getProperty("file.separator") + count + ".xml";
            count++;
            System.out.println("The " + count + " is located in " + fileoutpath);
            FileOutputStream fos = new FileOutputStream(fileoutpath);
            OutputFormat format = OutputFormat.createPrettyPrint();
            XMLWriter writer = new XMLWriter(fos, format);
            // XMLWriter writer = new XMLWriter(new FileOutputStream(fileoutpath));
            //w??
            org.dom4j.Element firstelement = blastOutput_iterations.get(i);
            Iteration_queryIDstr = firstelement.element("Iteration_query-ID").getText();
            Iteration_queryDefstr = firstelement.element("Iteration_query-def").getText();
            Iteration_query_len = firstelement.element("Iteration_query-len").getText();

            //org.dom4j.DocumentFactory DocumentFactory = new org.dom4j.DocumentFactory();

            Document document2 = DocumentHelper.createDocument();
            ;
            org.dom4j.Element BlastOutputElement = document2.addElement("BlastOutput");
            //doc.setRootElement(BlastOutputElement);
            //;
            BlastOutputElement.add(BlastOutput_program);
            BlastOutputElement.add(BlastOutput_version);
            BlastOutputElement.add(BlastOutput_reference);
            BlastOutputElement.add(BlastOutput_db);
            BlastOutputElement.addElement("BlastOutput_query-ID");
            BlastOutputElement.element("BlastOutput_query-ID").setText(Iteration_queryIDstr);
            BlastOutputElement.addElement("BlastOutput_query-def");
            BlastOutputElement.element("BlastOutput_query-def").setText(Iteration_queryDefstr);
            BlastOutputElement.addElement("BlastOutput_query-len");
            BlastOutputElement.element("BlastOutput_query-len").setText(Iteration_query_len);
            //                Element BlastOutput_param_new=DocumentFactory.createElement("BlastOutput_param");
            //                for (Iterator it = BlastOutput_param.elementIterator(); it.hasNext();) {
            //                    Element tempele=(Element) it.next();
            //                    tempele.getParent().remove(tempele);
            //                    BlastOutput_param_new.add(tempele);
            //                }
            BlastOutputElement.add(BlastOutput_param);
            //BlastOutputElement.add(BlastOutput_param);
            if (i + seqnumber < blastOutput_iterations.size()) {
                Iterationlist = blastOutput_iterations.subList(i, i + seqnumber);
            } else {
                Iterationlist = blastOutput_iterations.subList(i, blastOutput_iterations.size() - 1);
            }
            //System.out.println(Iterationlist.size());
            //?query
            resetIterationlist(Iterationlist);
            //?BlastOutput_iterations

            Element BlastOutput_iterations = DocumentFactory.createElement("BlastOutput_iterations");
            //BlastOutputElement.addAttribute("BlastOutput_iterations");
            //org.dom4j.Element BlastOutput_iterations = new org.dom4j.Element("BlastOutput_iterations");
            for (int j = 0; j < Iterationlist.size(); j++) {
                Iterationlist.get(j).getParent().remove(Iterationlist.get(j));
                //System.out.println(j);
                BlastOutput_iterations.add(Iterationlist.get(j));
            }
            BlastOutputElement.add(BlastOutput_iterations);

            //
            writer.write(document2);
            writer.close();
            BlastOutput_program.getParent().remove(BlastOutput_program);
            BlastOutput_version.getParent().remove(BlastOutput_version);
            BlastOutput_reference.getParent().remove(BlastOutput_reference);
            BlastOutput_db.getParent().remove(BlastOutput_db);
            BlastOutput_param.getParent().remove(BlastOutput_param);
        }
    } catch (DocumentException ex) {
        Logger.getLogger(BlastXMLsplit.class.getName()).log(Level.SEVERE, null, ex);
    }

}

From source file:cn.com.xdays.xshop.action.admin.InstallAction.java

public String save() throws URISyntaxException, IOException, DocumentException {
    if (isInstalled()) {
        return ajaxJsonErrorMessage("SHOP++?????");
    }/* w  ww  .j  av a2 s  . c  o  m*/
    if (StringUtils.isEmpty(databaseHost)) {
        return ajaxJsonErrorMessage("?!");
    }
    if (StringUtils.isEmpty(databasePort)) {
        return ajaxJsonErrorMessage("??!");
    }
    if (StringUtils.isEmpty(databaseUsername)) {
        return ajaxJsonErrorMessage("???!");
    }
    if (StringUtils.isEmpty(databasePassword)) {
        return ajaxJsonErrorMessage("??!");
    }
    if (StringUtils.isEmpty(databaseName)) {
        return ajaxJsonErrorMessage("???!");
    }
    if (StringUtils.isEmpty(adminUsername)) {
        return ajaxJsonErrorMessage("???!");
    }
    if (StringUtils.isEmpty(adminPassword)) {
        return ajaxJsonErrorMessage("??!");
    }
    if (StringUtils.isEmpty(installStatus)) {
        Map<String, String> jsonMap = new HashMap<String, String>();
        jsonMap.put(STATUS, "requiredCheckFinish");
        return ajaxJson(jsonMap);
    }

    String jdbcUrl = "jdbc:mysql://" + databaseHost + ":" + databasePort + "/" + databaseName
            + "?useUnicode=true&characterEncoding=UTF-8";

    Connection connection = null;
    PreparedStatement preparedStatement = null;
    ResultSet resultSet = null;
    try {
        Class.forName("com.mysql.jdbc.Driver");
        // ?
        connection = DriverManager.getConnection(jdbcUrl, databaseUsername, databasePassword);
        DatabaseMetaData databaseMetaData = connection.getMetaData();
        String[] types = { "TABLE" };
        resultSet = databaseMetaData.getTables(null, databaseName, "%", types);
        if (StringUtils.equalsIgnoreCase(installStatus, "databaseCheck")) {
            Map<String, String> jsonMap = new HashMap<String, String>();
            jsonMap.put(STATUS, "databaseCheckFinish");
            return ajaxJson(jsonMap);
        }

        // ?
        if (StringUtils.equalsIgnoreCase(installStatus, "databaseCreate")) {
            StringBuffer stringBuffer = new StringBuffer();
            BufferedReader bufferedReader = null;
            String sqlFilePath = Thread.currentThread().getContextClassLoader().getResource("").toURI()
                    .getPath() + SQL_INSTALL_FILE_NAME;
            bufferedReader = new BufferedReader(
                    new InputStreamReader(new FileInputStream(sqlFilePath), "UTF-8"));
            String line = "";
            while (null != line) {
                line = bufferedReader.readLine();
                stringBuffer.append(line);
                if (null != line && line.endsWith(";")) {
                    System.out.println("[SHOP++?]SQL: " + line);
                    preparedStatement = connection.prepareStatement(stringBuffer.toString());
                    preparedStatement.executeUpdate();
                    stringBuffer = new StringBuffer();
                }
            }
            String insertAdminSql = "INSERT INTO `admin` VALUES ('402881862bec2a21012bec2bd8de0003','2010-10-10 0:0:0','2010-10-10 0:0:0','','admin@shopxx.net',b'1',b'0',b'0',b'0',NULL,NULL,0,NULL,'?','"
                    + DigestUtils.md5Hex(adminPassword) + "','" + adminUsername + "');";
            String insertAdminRoleSql = "INSERT INTO `admin_role` VALUES ('402881862bec2a21012bec2bd8de0003','402881862bec2a21012bec2b70510002');";
            preparedStatement = connection.prepareStatement(insertAdminSql);
            preparedStatement.executeUpdate();
            preparedStatement = connection.prepareStatement(insertAdminRoleSql);
            preparedStatement.executeUpdate();
        }
    } catch (Exception e) {
        e.printStackTrace();
        return ajaxJsonErrorMessage("???!");
    } finally {
        try {
            if (resultSet != null) {
                resultSet.close();
                resultSet = null;
            }
            if (preparedStatement != null) {
                preparedStatement.close();
                preparedStatement = null;
            }
            if (connection != null) {
                connection.close();
                connection = null;
            }
        } catch (SQLException e) {
            e.printStackTrace();
        }
    }

    // ???
    String configFilePath = Thread.currentThread().getContextClassLoader().getResource("").toURI().getPath()
            + JDBC_CONFIG_FILE_NAME;
    Properties properties = new Properties();
    properties.put("jdbc.driver", "com.mysql.jdbc.Driver");
    properties.put("jdbc.url", jdbcUrl);
    properties.put("jdbc.username", databaseUsername);
    properties.put("jdbc.password", databasePassword);
    properties.put("hibernate.dialect", "org.hibernate.dialect.MySQLDialect");
    properties.put("hibernate.show_sql", "false");
    properties.put("hibernate.format_sql", "false");
    OutputStream outputStream = new FileOutputStream(configFilePath);
    properties.store(outputStream, JDBC_CONFIG_FILE_DESCRIPTION);
    outputStream.close();

    // ??
    String backupWebConfigFilePath = Thread.currentThread().getContextClassLoader().getResource("").toURI()
            .getPath() + BACKUP_WEB_CONFIG_FILE_NAME;
    String backupApplicationContextConfigFilePath = Thread.currentThread().getContextClassLoader()
            .getResource("").toURI().getPath() + BACKUP_APPLICATION_CONTEXT_CONFIG_FILE_NAME;
    String backupCompassApplicationContextConfigFilePath = Thread.currentThread().getContextClassLoader()
            .getResource("").toURI().getPath() + BACKUP_COMPASS_APPLICATION_CONTEXT_CONFIG_FILE_NAME;
    String backupSecurityApplicationContextConfigFilePath = Thread.currentThread().getContextClassLoader()
            .getResource("").toURI().getPath() + BACKUP_SECURITY_APPLICATION_CONTEXT_CONFIG_FILE_NAME;

    String webConfigFilePath = new File(
            Thread.currentThread().getContextClassLoader().getResource("").toURI().getPath()).getParent() + "/"
            + WEB_CONFIG_FILE_NAME;
    String applicationContextConfigFilePath = Thread.currentThread().getContextClassLoader().getResource("")
            .toURI().getPath() + APPLICATION_CONTEXT_CONFIG_FILE_NAME;
    String compassApplicationContextConfigFilePath = Thread.currentThread().getContextClassLoader()
            .getResource("").toURI().getPath() + COMPASS_APPLICATION_CONTEXT_CONFIG_FILE_NAME;
    String securityApplicationContextConfigFilePath = Thread.currentThread().getContextClassLoader()
            .getResource("").toURI().getPath() + SECURITY_APPLICATION_CONTEXT_CONFIG_FILE_NAME;

    FileUtils.copyFile(new File(backupWebConfigFilePath), new File(webConfigFilePath));
    FileUtils.copyFile(new File(backupApplicationContextConfigFilePath),
            new File(applicationContextConfigFilePath));
    FileUtils.copyFile(new File(backupCompassApplicationContextConfigFilePath),
            new File(compassApplicationContextConfigFilePath));
    FileUtils.copyFile(new File(backupSecurityApplicationContextConfigFilePath),
            new File(securityApplicationContextConfigFilePath));

    // ??
    String systemConfigFilePath = Thread.currentThread().getContextClassLoader().getResource("").toURI()
            .getPath() + SystemConfigUtil.CONFIG_FILE_NAME;
    File systemConfigFile = new File(systemConfigFilePath);
    SAXReader saxReader = new SAXReader();
    Document document = saxReader.read(systemConfigFile);
    Element rootElement = document.getRootElement();
    Element systemConfigElement = rootElement.element("systemConfig");
    Node isInstalledNode = document.selectSingleNode("/shopxx/systemConfig/isInstalled");
    if (isInstalledNode == null) {
        isInstalledNode = systemConfigElement.addElement("isInstalled");
    }
    isInstalledNode.setText("true");
    try {
        OutputFormat outputFormat = OutputFormat.createPrettyPrint();// XML?
        outputFormat.setEncoding("UTF-8");// XML?
        outputFormat.setIndent(true);// ?
        outputFormat.setIndent("   ");// TAB?
        outputFormat.setNewlines(true);// ??
        XMLWriter xmlWriter = new XMLWriter(new FileOutputStream(systemConfigFile), outputFormat);
        xmlWriter.write(document);
        xmlWriter.close();
    } catch (Exception e) {
        e.printStackTrace();
    }
    return ajaxJsonSuccessMessage("SHOP++?????");
}

From source file:cn.feng.web.ssm.excel.controller.StringUtils.java

License:Apache License

/**
 * //w  ww.ja v a 2  s. c o m
 * dom4j 
 * @param document
 * @return
 */
public static String document2str(Document document, String chartset) {
    String result = "";
    OutputFormat format;
    ByteArrayOutputStream out;
    try {
        format = OutputFormat.createPrettyPrint();
        format.setEncoding(chartset);
        out = new ByteArrayOutputStream();
        XMLWriter writer = new XMLWriter(out, format);
        writer.write(document);
        writer.flush();
        writer.close();
        result = out.toString(format.getEncoding());
    } catch (UnsupportedEncodingException e) {
        e.printStackTrace();
    } catch (IOException e) {
        e.printStackTrace();
    }
    return result;
}