Example usage for org.jfree.chart.axis LogAxis setTickUnit

Introduction

In this page you can find the example usage for org.jfree.chart.axis LogAxis setTickUnit.

Prototype

public void setTickUnit(NumberTickUnit unit) 

Source Link

Document

Sets the tick unit for the axis and sends an AxisChangeEvent to all registered listeners.

Usage

From source file:ecosim.gui.SummaryPane.java

/**
 *  Private method to build the binning chart.
 *
 *  @return A ChartPanel containing the binning chart.
 *//*from ww  w . j  a  v  a  2 s.c  o  m*/
private ChartPanel makeBinningChart() {
    final DefaultXYDataset binData = new DefaultXYDataset();
    final NumberFormat nf = NumberFormat.getInstance();
    final NumberAxis xAxis = new NumberAxis("Sequence identity criterion");
    nf.setMinimumFractionDigits(2);
    xAxis.setLowerBound(Binning.binLevels[0]);
    xAxis.setUpperBound(1.0D);
    xAxis.setTickUnit(new NumberTickUnit(0.05D, nf));
    LogAxis yAxis = new LogAxis("Number of bins");
    yAxis.setBase(2.0D);
    yAxis.setNumberFormatOverride(NumberFormat.getInstance());
    yAxis.setTickUnit(new NumberTickUnit(2.0D));
    yAxis.setMinorTickMarksVisible(true);
    yAxis.setAutoRangeMinimumSize(4.0D);
    yAxis.setSmallestValue(1.0D);
    XYLineAndShapeRenderer renderer = new XYLineAndShapeRenderer(true, false);
    for (int i = 0; i < seriesColors.length; i++) {
        renderer.setSeriesPaint(i, seriesColors[i]);
        renderer.setSeriesStroke(i, new BasicStroke(seriesStroke[i]));
    }
    XYPlot plot = new XYPlot(binData, xAxis, yAxis, renderer);
    JFreeChart binChart = new JFreeChart(null, JFreeChart.DEFAULT_TITLE_FONT, plot, false);
    binChart.setPadding(new RectangleInsets(0.0D, 0.0D, 0.0D, 10.0D));
    LegendTitle legend = new LegendTitle(plot);
    legend.setMargin(new RectangleInsets(1.0D, 1.0D, 1.0D, 1.0D));
    legend.setFrame(new LineBorder());
    legend.setBackgroundPaint(Color.white);
    legend.setPosition(RectangleEdge.BOTTOM);
    plot.addAnnotation(new XYTitleAnnotation(0.001D, 0.999D, legend, RectangleAnchor.TOP_LEFT));
    final ChartPanel pane = new ChartPanel(binChart, false, true, true, false, false);
    // Watch for changes to the Summary object.
    summary.addObserver(new Observer() {
        public void update(Observable o, Object obj) {
            Summary s = (Summary) obj;
            ParameterEstimate estimate = s.getEstimate();
            ArrayList<BinLevel> bins = s.getBins();
            if (bins.size() > 0) {
                double[][] values = new double[2][bins.size()];
                Double low = 1.0d;
                for (int i = 0; i < bins.size(); i++) {
                    BinLevel bin = bins.get(i);
                    values[0][i] = bin.getCrit();
                    values[1][i] = bin.getLevel();
                    if (values[0][i] < low)
                        low = values[0][i];
                }
                binData.addSeries("sequences", values);
                xAxis.setLowerBound(low);
                if (low > 0.95d - MasterVariables.EPSILON) {
                    xAxis.setTickUnit(new NumberTickUnit(0.005D, nf));
                } else if (low > 0.90d - MasterVariables.EPSILON) {
                    xAxis.setTickUnit(new NumberTickUnit(0.010D, nf));
                } else if (low > 0.80d - MasterVariables.EPSILON) {
                    xAxis.setTickUnit(new NumberTickUnit(0.025D, nf));
                }
                if (estimate != null) {
                    double[][] omega = new double[2][bins.size()];
                    double[][] sigma = new double[2][bins.size()];
                    double[] omegaLine = estimate.getOmega();
                    double[] sigmaLine = estimate.getSigma();
                    for (int i = 0; i < bins.size(); i++) {
                        double crit = 1.0D - values[0][i];
                        double snp = s.getLength() * crit;
                        omega[0][i] = values[0][i];
                        sigma[0][i] = values[0][i];
                        omega[1][i] = Math.pow(2.0D, snp * omegaLine[0] + omegaLine[1]);
                        sigma[1][i] = Math.pow(2.0D, snp * sigmaLine[0] + sigmaLine[1]);
                    }
                    if (-1.0D * omegaLine[0] > MasterVariables.EPSILON) {
                        binData.addSeries("omega", omega);
                    }
                    if (-1.0D * sigmaLine[0] > MasterVariables.EPSILON) {
                        binData.addSeries("sigma", sigma);
                    }
                }
                // Repaint the summary pane.
                pane.repaint();
            }
        }
    });
    return pane;
}

---

From source file:edu.scripps.fl.curves.plot.CurvePlot.java

public void init() {
    dataset = new YIntervalSeriesCollection();
    LogAxis xAxis = new LogAxis(xAxisLabel) {
        @Override/*  ww  w.j  ava2  s. com*/
        public NumberFormat getNumberFormatOverride() {
            return nf;
        }

        protected String createTickLabel(double value) {
            return getNumberFormatOverride().format(value);
        }
    };
    xAxis.setTickUnit(new NumberTickUnit(1.0, nf));
    xAxis.setTickMarksVisible(true);
    // xAxis.setTickLabelFont(font); // now set in separate method
    NumberAxis yAxis = new NumberAxis(yAxisLabel);
    //      yAxis.setRange(-20, 120);
    // yAxis.setTickLabelFont(font);
    yAxis.setTickUnit(new NumberTickUnit(25));
    plot = new XYPlot(dataset, xAxis, yAxis, null);
    plot.setDomainGridlinesVisible(false);
    plot.setRangeGridlinesVisible(false);
    plot.setRangeMinorGridlinesVisible(true);
    // XYLineAndShapeRenderer renderer = new XYLineAndShapeRenderer();
    MyXYErrorRenderer renderer = new MyXYErrorRenderer();
    plot.setRenderer(renderer);
    plot.setBackgroundPaint(Color.WHITE);
    chart = new JFreeChart("", JFreeChart.DEFAULT_TITLE_FONT, plot, true);
    chart.setBackgroundPaint(Color.WHITE);
    plot.setDrawingSupplier(new CurvePlotDrawingSupplier());
}

---