List of usage examples for org.jfree.chart.axis NumberAxis setLowerMargin
public void setLowerMargin(double margin)
From source file:org.metacsp.utility.UI.PlotBoxTLSmall.java
/** * Creates a chart for the PlotBoxBehavior * //from w ww.ja v a2 s . c om * @param dataset A dataset for the chart. * * @return A chart where the PlotBoxBehavior will be plotted. */ @SuppressWarnings("deprecation") private JFreeChart createChart(CategoryDataset dataset) { // String s = name; String s = null; String tit = null; String ax = null; // if (first) // tit = title + " (EST)"; // else if (last) // ax = "Time"; tit = this.name; chart = ChartFactory.createStackedBarChart(tit, // chart title s, // domain axis label ax, // range axis label dataset, // data PlotOrientation.HORIZONTAL, // the plot orientation false, // legend false, // tooltips false // urls ); CategoryPlot plot = chart.getCategoryPlot(); chart.getTitle().setHorizontalAlignment(HorizontalAlignment.LEFT); plot.setRangeAxisLocation(AxisLocation.BOTTOM_OR_RIGHT); //plot.getCategories(); //CategoryItemRenderer renderer = plot.getRenderer(); StackedBarRenderer renderer = (StackedBarRenderer) plot.getRenderer(); renderer.setItemLabelsVisible(true); renderer.setItemLabelGenerator(new LabelGenerator(true)); ItemLabelPosition pos = new ItemLabelPosition(ItemLabelAnchor.INSIDE1, TextAnchor.TOP_RIGHT); renderer.setPositiveItemLabelPositionFallback(pos); for (int i = 0; i < dataset.getRowCount(); i++) { renderer.setSeriesPositiveItemLabelPosition(i, pos); } /* if (values.elementAt(0) instanceof ResourceLevel) { renderer.setItemLabelGenerator( new PlotBoxTL.LabelGenerator(true)); } else renderer.setItemLabelGenerator( new PlotBoxTL.LabelGenerator(false)); */ renderer.setToolTipGenerator(new PlotBoxTooltip()); plot.setRenderer(renderer); // renderer.getSeriesStroke(0). plot.setForegroundAlpha(0.8f); NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis(); rangeAxis.setStandardTickUnits(NumberAxis.createIntegerTickUnits()); rangeAxis.setLowerMargin(2.0); rangeAxis.setUpperMargin(2.0); //long origin = stl.getSerializableSimpleTimeline().getEarliestStartTime(); //long horizon = stl.getSerializableSimpleTimeline().getLatestEndTime(); long origin = stl.getPulses()[0].longValue(); NumberFormat nf = new DecimalFormat(); rangeAxis.setNumberFormatOverride(nf); if (this.range != null) rangeAxis.setRange(range); //rangeAxis.setRange((new Double(origin)).doubleValue(), (new Double(horizon)).doubleValue()); ///// 0 should be replaced by the start of the horizon renderer.setBase(origin); //renderer.setBase(); for (int i = 0; i < durations.length; i++) { if (stl.isInconsistent(values[i])) renderer.setSeriesPaint(i, new Color(198, 30, 69)); else if (stl.isCritical(values[i])) renderer.setSeriesPaint(i, new Color(238, 234, 111)); else if (stl.isUndetermined(values[i])) renderer.setSeriesPaint(i, new Color(255, 255, 255)); else renderer.setSeriesPaint(i, new Color(111, 180, 238)); renderer.setSeriesOutlinePaint(i, Color.black); } renderer.setBaseSeriesVisibleInLegend(false, false); renderer.setSeriesStroke(0, new BasicStroke(40f)); return chart; }
From source file:it.eng.spagobi.engines.chart.bo.charttypes.XYCharts.BlockChart.java
/** * Creates a chart for the specified dataset. * /*from w w w.ja v a2 s . c o m*/ * @param dataset the dataset. * * @return A chart instance. */ public JFreeChart createChart(DatasetMap datasets) { XYZDataset dataset = (XYZDataset) datasets.getDatasets().get("1"); //Creates the xAxis with its label and style NumberAxis xAxis = new NumberAxis(xLabel); xAxis.setLowerMargin(0.0); xAxis.setUpperMargin(0.0); xAxis.setLabel(xLabel); if (addLabelsStyle != null && addLabelsStyle.getFont() != null) { xAxis.setLabelFont(addLabelsStyle.getFont()); xAxis.setLabelPaint(addLabelsStyle.getColor()); } //Creates the yAxis with its label and style NumberAxis yAxis = new NumberAxis(yLabel); yAxis.setAutoRangeIncludesZero(false); yAxis.setInverted(false); yAxis.setLowerMargin(0.0); yAxis.setUpperMargin(0.0); yAxis.setTickLabelsVisible(true); yAxis.setLabel(yLabel); if (addLabelsStyle != null && addLabelsStyle.getFont() != null) { yAxis.setLabelFont(addLabelsStyle.getFont()); yAxis.setLabelPaint(addLabelsStyle.getColor()); } yAxis.setStandardTickUnits(NumberAxis.createIntegerTickUnits()); Color outboundCol = new Color(Integer.decode(outboundColor).intValue()); //Sets the graph paint scale and the legend paintscale LookupPaintScale paintScale = new LookupPaintScale(zvalues[0], (new Double(zrangeMax)).doubleValue(), outboundCol); LookupPaintScale legendPaintScale = new LookupPaintScale(0.5, 0.5 + zvalues.length, outboundCol); for (int ke = 0; ke <= (zvalues.length - 1); ke++) { Double key = (new Double(zvalues[ke])); Color temp = (Color) colorRangeMap.get(key); paintScale.add(zvalues[ke], temp); legendPaintScale.add(0.5 + ke, temp); } //Configures the renderer XYBlockRenderer renderer = new XYBlockRenderer(); renderer.setPaintScale(paintScale); double blockHeight = (new Double(blockH)).doubleValue(); double blockWidth = (new Double(blockW)).doubleValue(); renderer.setBlockWidth(blockWidth); renderer.setBlockHeight(blockHeight); //configures the plot with title, subtitle, axis ecc. XYPlot plot = new XYPlot(dataset, xAxis, yAxis, renderer); plot.setBackgroundPaint(Color.white); plot.setDomainGridlinePaint(Color.black); plot.setRangeGridlinePaint(Color.black); plot.setDomainCrosshairPaint(Color.black); plot.setForegroundAlpha(0.66f); plot.setAxisOffset(new RectangleInsets(5, 5, 5, 5)); JFreeChart chart = new JFreeChart(plot); TextTitle title = setStyleTitle(name, styleTitle); chart.setTitle(title); if (subName != null && !subName.equals("")) { TextTitle subTitle = setStyleTitle(subName, styleSubTitle); chart.addSubtitle(subTitle); } chart.removeLegend(); chart.setBackgroundPaint(Color.white); //Sets legend labels SymbolAxis scaleAxis = new SymbolAxis(null, legendLabels); scaleAxis.setRange(0.5, 0.5 + zvalues.length); scaleAxis.setPlot(new PiePlot()); scaleAxis.setGridBandsVisible(false); scaleAxis.setLabel(zLabel); //scaleAxis.setLabelAngle(3.14/2); scaleAxis.setLabelFont(addLabelsStyle.getFont()); scaleAxis.setLabelPaint(addLabelsStyle.getColor()); //draws legend as chart subtitle PaintScaleLegend psl = new PaintScaleLegend(legendPaintScale, scaleAxis); psl.setAxisOffset(2.0); psl.setPosition(RectangleEdge.RIGHT); psl.setMargin(new RectangleInsets(5, 1, 5, 1)); chart.addSubtitle(psl); if (yLabels != null) { //Sets y legend labels LookupPaintScale legendPaintScale2 = new LookupPaintScale(0, (yLabels.length - 1), Color.white); for (int ke = 0; ke < yLabels.length; ke++) { Color temp = Color.white; legendPaintScale2.add(1 + ke, temp); } SymbolAxis scaleAxis2 = new SymbolAxis(null, yLabels); scaleAxis2.setRange(0, (yLabels.length - 1)); scaleAxis2.setPlot(new PiePlot()); scaleAxis2.setGridBandsVisible(false); //draws legend as chart subtitle PaintScaleLegend psl2 = new PaintScaleLegend(legendPaintScale2, scaleAxis2); psl2.setAxisOffset(5.0); psl2.setPosition(RectangleEdge.LEFT); psl2.setMargin(new RectangleInsets(8, 1, 40, 1)); psl2.setStripWidth(0); psl2.setStripOutlineVisible(false); chart.addSubtitle(psl2); } return chart; }
From source file:net.sf.mzmine.modules.visualization.spectra.SpectraPlot.java
public SpectraPlot(ActionListener masterPlot) { super(null, true); setBackground(Color.white);/*from ww w. ja v a 2 s . c o m*/ setCursor(Cursor.getPredefinedCursor(Cursor.CROSSHAIR_CURSOR)); // initialize the chart by default time series chart from factory chart = ChartFactory.createXYLineChart("", // title "m/z", // x-axis label "Intensity", // y-axis label null, // data set PlotOrientation.VERTICAL, // orientation true, // isotopeFlag, // create legend? true, // generate tooltips? false // generate URLs? ); chart.setBackgroundPaint(Color.white); setChart(chart); // title chartTitle = chart.getTitle(); chartTitle.setMargin(5, 0, 0, 0); chartTitle.setFont(titleFont); chartSubTitle = new TextTitle(); chartSubTitle.setFont(subTitleFont); chartSubTitle.setMargin(5, 0, 0, 0); chart.addSubtitle(chartSubTitle); // legend constructed by ChartFactory LegendTitle legend = chart.getLegend(); legend.setItemFont(legendFont); legend.setFrame(BlockBorder.NONE); // disable maximum size (we don't want scaling) setMaximumDrawWidth(Integer.MAX_VALUE); setMaximumDrawHeight(Integer.MAX_VALUE); setMinimumDrawHeight(0); // set the plot properties plot = chart.getXYPlot(); plot.setBackgroundPaint(Color.white); plot.setAxisOffset(new RectangleInsets(5.0, 5.0, 5.0, 5.0)); // set rendering order plot.setDatasetRenderingOrder(DatasetRenderingOrder.FORWARD); // set grid properties plot.setDomainGridlinePaint(gridColor); plot.setRangeGridlinePaint(gridColor); // set crosshair (selection) properties plot.setDomainCrosshairVisible(false); plot.setRangeCrosshairVisible(false); NumberFormat mzFormat = MZmineCore.getConfiguration().getMZFormat(); NumberFormat intensityFormat = MZmineCore.getConfiguration().getIntensityFormat(); // set the X axis (retention time) properties NumberAxis xAxis = (NumberAxis) plot.getDomainAxis(); xAxis.setNumberFormatOverride(mzFormat); xAxis.setUpperMargin(0.001); xAxis.setLowerMargin(0.001); xAxis.setTickLabelInsets(new RectangleInsets(0, 0, 20, 20)); // set the Y axis (intensity) properties NumberAxis yAxis = (NumberAxis) plot.getRangeAxis(); yAxis.setNumberFormatOverride(intensityFormat); // set focusable state to receive key events setFocusable(true); // register key handlers GUIUtils.registerKeyHandler(this, KeyStroke.getKeyStroke("LEFT"), masterPlot, "PREVIOUS_SCAN"); GUIUtils.registerKeyHandler(this, KeyStroke.getKeyStroke("RIGHT"), masterPlot, "NEXT_SCAN"); GUIUtils.registerKeyHandler(this, KeyStroke.getKeyStroke('+'), this, "ZOOM_IN"); GUIUtils.registerKeyHandler(this, KeyStroke.getKeyStroke('-'), this, "ZOOM_OUT"); // add items to popup menu if (masterPlot instanceof SpectraVisualizerWindow) { JPopupMenu popupMenu = getPopupMenu(); popupMenu.addSeparator(); GUIUtils.addMenuItem(popupMenu, "Toggle centroid/continuous mode", masterPlot, "TOGGLE_PLOT_MODE"); GUIUtils.addMenuItem(popupMenu, "Toggle displaying of data points in continuous mode", masterPlot, "SHOW_DATA_POINTS"); GUIUtils.addMenuItem(popupMenu, "Toggle displaying of peak values", masterPlot, "SHOW_ANNOTATIONS"); GUIUtils.addMenuItem(popupMenu, "Toggle displaying of picked peaks", masterPlot, "SHOW_PICKED_PEAKS"); popupMenu.addSeparator(); GUIUtils.addMenuItem(popupMenu, "Set axes range", masterPlot, "SETUP_AXES"); GUIUtils.addMenuItem(popupMenu, "Set same range to all windows", masterPlot, "SET_SAME_RANGE"); popupMenu.addSeparator(); GUIUtils.addMenuItem(popupMenu, "Add isotope pattern", masterPlot, "ADD_ISOTOPE_PATTERN"); } }
From source file:io.github.mzmine.modules.plots.chromatogram.ChromatogramPlotWindowController.java
@FXML public void initialize() { final JFreeChart chart = chartNode.getChart(); final XYPlot plot = chart.getXYPlot(); // Do not set colors and strokes dynamically. They are instead provided // by the dataset and configured in configureRenderer() plot.setDrawingSupplier(null);/*from w ww . j ava 2s . c om*/ plot.setDomainGridlinePaint(JavaFXUtil.convertColorToAWT(gridColor)); plot.setRangeGridlinePaint(JavaFXUtil.convertColorToAWT(gridColor)); plot.setBackgroundPaint(JavaFXUtil.convertColorToAWT(backgroundColor)); plot.setAxisOffset(new RectangleInsets(5.0, 5.0, 5.0, 5.0)); plot.setDatasetRenderingOrder(DatasetRenderingOrder.FORWARD); plot.setDomainCrosshairPaint(JavaFXUtil.convertColorToAWT(crossHairColor)); plot.setRangeCrosshairPaint(JavaFXUtil.convertColorToAWT(crossHairColor)); plot.setDomainCrosshairVisible(true); plot.setRangeCrosshairVisible(true); // chart properties chart.setBackgroundPaint(JavaFXUtil.convertColorToAWT(backgroundColor)); // legend properties LegendTitle legend = chart.getLegend(); // legend.setItemFont(legendFont); legend.setFrame(BlockBorder.NONE); // set the X axis (retention time) properties NumberAxis xAxis = (NumberAxis) plot.getDomainAxis(); xAxis.setLabel("Retention time (min)"); xAxis.setUpperMargin(0.03); xAxis.setLowerMargin(0.03); xAxis.setRangeType(RangeType.POSITIVE); xAxis.setTickLabelInsets(new RectangleInsets(0, 0, 20, 20)); // set the Y axis (intensity) properties NumberAxis yAxis = (NumberAxis) plot.getRangeAxis(); yAxis.setLabel("Intensity"); yAxis.setRangeType(RangeType.POSITIVE); yAxis.setAutoRangeIncludesZero(true); // set the fixed number formats, because otherwise JFreeChart sometimes // shows exponent, sometimes it doesn't DecimalFormat mzFormat = MZmineCore.getConfiguration().getMZFormat(); xAxis.setNumberFormatOverride(mzFormat); DecimalFormat intensityFormat = MZmineCore.getConfiguration().getIntensityFormat(); yAxis.setNumberFormatOverride(intensityFormat); chartTitle = chartNode.getChart().getTitle(); chartTitle.setMargin(5, 0, 0, 0); chartTitle.setFont(titleFont); chartTitle.setText("Chromatogram"); chartNode.setCursor(Cursor.CROSSHAIR); // Remove the dataset if it is removed from the list datasets.addListener((Change<? extends ChromatogramPlotDataSet> c) -> { while (c.next()) { if (c.wasRemoved()) { for (ChromatogramPlotDataSet ds : c.getRemoved()) { int index = plot.indexOf(ds); plot.setDataset(index, null); } } } }); itemLabelsVisible.addListener((prop, oldVal, newVal) -> { for (ChromatogramPlotDataSet dataset : datasets) { int datasetIndex = plot.indexOf(dataset); XYItemRenderer renderer = plot.getRenderer(datasetIndex); renderer.setBaseItemLabelsVisible(newVal); } }); legendVisible.addListener((prop, oldVal, newVal) -> { legend.setVisible(newVal); }); }
From source file:edu.ucla.stat.SOCR.chart.demo.PowerTransformQQNormalPlotChart.java
/** * Creates a chart./* www .j a va 2s . c om*/ * * @param dataset the data for the chart. * * @return a chart. */ protected JFreeChart createChart(XYDataset dataset) { // create the chart... JFreeChart chart = ChartFactory.createXYLineChart(chartTitle, //"Power Tranfomed Normal Q-Q plot", // chart title domainLabel, // x axis label rangeLabel, // y axis label dataset, // data PlotOrientation.VERTICAL, true, // include legend true, // tooltips false // urls ); // NOW DO SOME OPTIONAL CUSTOMISATION OF THE CHART... chart.setBackgroundPaint(Color.white); // get a reference to the plot for further customisation... XYPlot plot = (XYPlot) chart.getPlot(); plot.setBackgroundPaint(Color.white); plot.setAxisOffset(new RectangleInsets(5.0, 5.0, 5.0, 5.0)); plot.setDomainGridlinePaint(Color.lightGray); plot.setRangeGridlinePaint(Color.lightGray); XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) plot.getRenderer(); // renderer.setShapesVisible(true); renderer.setBaseShapesFilled(true); // renderer.setLinesVisible(false); renderer.setSeriesLinesVisible(1, true); renderer.setSeriesShapesVisible(1, false); renderer.setSeriesLinesVisible(2, true); renderer.setSeriesShapesVisible(2, true); renderer.setSeriesLinesVisible(0, false); renderer.setSeriesShapesVisible(0, true); //renderer.setLegendItemLabelGenerator(new SOCRXYSeriesLabelGenerator()); // change the auto tick unit selection to integer units only... NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis(); rangeAxis.setAutoRangeIncludesZero(false); rangeAxis.setUpperMargin(0); rangeAxis.setLowerMargin(0); // rangeAxis.setStandardTickUnits(NumberAxis.createIntegerTickUnits()); NumberAxis domainAxis = (NumberAxis) plot.getDomainAxis(); domainAxis.setAutoRangeIncludesZero(false); domainAxis.setUpperMargin(0); domainAxis.setLowerMargin(0); // domainAxis.setStandardTickUnits(NumberAxis.createIntegerTickUnits()); // OPTIONAL CUSTOMISATION COMPLETED. //setQQSummary(dataset); // very confusing return chart; }
From source file:org.codehaus.mojo.dashboard.report.plugin.chart.StackedBarChartRenderer.java
/** * //from ww w .ja va 2 s .c o m */ public void createChart() { CategoryDataset categorydataset = (CategoryDataset) this.datasetStrategy.getDataset(); report = ChartFactory.createStackedBarChart(this.datasetStrategy.getTitle(), this.datasetStrategy.getYAxisLabel(), this.datasetStrategy.getXAxisLabel(), categorydataset, PlotOrientation.HORIZONTAL, true, true, false); // report.setBackgroundPaint( Color.lightGray ); report.setAntiAlias(false); report.setPadding(new RectangleInsets(5.0d, 5.0d, 5.0d, 5.0d)); CategoryPlot categoryplot = (CategoryPlot) report.getPlot(); categoryplot.setBackgroundPaint(Color.white); categoryplot.setRangeGridlinePaint(Color.lightGray); NumberAxis numberaxis = (NumberAxis) categoryplot.getRangeAxis(); if (datasetStrategy instanceof CloverBarChartStrategy || datasetStrategy instanceof MultiCloverBarChartStrategy) { numberaxis.setRange(0.0D, StackedBarChartRenderer.NUMBER_AXIS_RANGE); numberaxis.setNumberFormatOverride(NumberFormat.getPercentInstance()); } else { numberaxis.setStandardTickUnits(NumberAxis.createIntegerTickUnits()); } numberaxis.setLowerMargin(0.0D); StackedBarRenderer stackedbarrenderer = (StackedBarRenderer) categoryplot.getRenderer(); stackedbarrenderer.setDrawBarOutline(false); stackedbarrenderer.setBaseItemLabelsVisible(true); stackedbarrenderer.setBaseItemLabelGenerator(new StandardCategoryItemLabelGenerator()); stackedbarrenderer.setBaseItemLabelFont(StackedBarRenderer.DEFAULT_VALUE_LABEL_FONT.deriveFont(Font.BOLD)); int height = (categorydataset.getColumnCount() * ChartUtils.STANDARD_BARCHART_ENTRY_HEIGHT * 2) + ChartUtils.STANDARD_BARCHART_ADDITIONAL_HEIGHT + 10; if (height > ChartUtils.MINIMUM_HEIGHT) { super.setHeight(height); } else { super.setHeight(ChartUtils.MINIMUM_HEIGHT); } Paint[] paints = this.datasetStrategy.getPaintColor(); for (int i = 0; i < categorydataset.getRowCount() && i < paints.length; i++) { stackedbarrenderer.setSeriesPaint(i, paints[i]); } }
From source file:edu.ucla.stat.SOCR.chart.SuperXYZChart.java
/** * Creates a chart./*from www. j av a 2 s. c o m*/ * * @param dataset the dataset. * * @return a chart. */ protected JFreeChart createChart(XYZDataset dataset) { // create the chart... JFreeChart chart = ChartFactory.createBubbleChart(chartTitle, // chart titl rangeLabel, // y axis label domainLabel, // x axis label dataset, // data PlotOrientation.VERTICAL, !legendPanelOn, // include legend true, // tooltips false // urls ); XYPlot plot = (XYPlot) chart.getPlot(); plot.setForegroundAlpha(0.65f); XYItemRenderer renderer = plot.getRenderer(); renderer.setSeriesPaint(0, Color.blue); // increase the margins to account for the fact that the auto-range // doesn't take into account the bubble size... NumberAxis domainAxis = (NumberAxis) plot.getDomainAxis(); domainAxis.setLowerMargin(0.15); domainAxis.setUpperMargin(0.15); NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis(); rangeAxis.setLowerMargin(0.15); rangeAxis.setUpperMargin(0.15); return chart; }
From source file:org.codehaus.mojo.dashboard.report.plugin.chart.BarChartRenderer.java
public void createChart() { CategoryDataset categorydataset = (CategoryDataset) this.datasetStrategy.getDataset(); report = ChartFactory.createBarChart(this.datasetStrategy.getTitle(), this.datasetStrategy.getYAxisLabel(), this.datasetStrategy.getXAxisLabel(), categorydataset, PlotOrientation.HORIZONTAL, true, true, false);//ww w . java 2 s . c o m // report.setBackgroundPaint( Color.lightGray ); report.setPadding(new RectangleInsets(5.0d, 5.0d, 5.0d, 5.0d)); CategoryPlot categoryplot = (CategoryPlot) report.getPlot(); categoryplot.setBackgroundPaint(Color.white); categoryplot.setRangeGridlinePaint(Color.lightGray); categoryplot.setDomainGridlinePaint(Color.lightGray); categoryplot.setRangeAxisLocation(AxisLocation.BOTTOM_OR_LEFT); NumberAxis numberaxis = (NumberAxis) categoryplot.getRangeAxis(); if (datasetStrategy instanceof CoberturaBarChartStrategy || datasetStrategy instanceof CloverBarChartStrategy || datasetStrategy instanceof MultiCloverBarChartStrategy) { numberaxis.setRange(0.0D, BarChartRenderer.NUMBER_AXIS_RANGE); numberaxis.setNumberFormatOverride(NumberFormat.getPercentInstance()); } else { numberaxis.setStandardTickUnits(NumberAxis.createIntegerTickUnits()); } numberaxis.setLowerMargin(0.0D); CategoryAxis axis = categoryplot.getDomainAxis(); axis.setLowerMargin(0.02); // two percent axis.setCategoryMargin(0.10); // ten percent axis.setUpperMargin(0.02); // two percent BarRenderer barrenderer = (BarRenderer) categoryplot.getRenderer(); barrenderer.setItemMargin(0.10); barrenderer.setDrawBarOutline(false); barrenderer.setBaseItemLabelsVisible(true); if (datasetStrategy instanceof CoberturaBarChartStrategy || datasetStrategy instanceof CloverBarChartStrategy || datasetStrategy instanceof MultiCloverBarChartStrategy) { barrenderer.setBaseItemLabelGenerator(new StandardCategoryItemLabelGenerator("{2}", NumberFormat.getPercentInstance(Locale.getDefault()))); } else { barrenderer.setBaseItemLabelGenerator(new StandardCategoryItemLabelGenerator()); } int height = (categorydataset.getColumnCount() * ChartUtils.STANDARD_BARCHART_ENTRY_HEIGHT * categorydataset.getRowCount()); if (height > ChartUtils.MINIMUM_HEIGHT) { super.setHeight(height); } else { super.setHeight(ChartUtils.MINIMUM_HEIGHT); } Paint[] paints = this.datasetStrategy.getPaintColor(); for (int i = 0; i < categorydataset.getRowCount() && i < paints.length; i++) { barrenderer.setSeriesPaint(i, paints[i]); } }
From source file:net.sf.mzmine.modules.visualization.neutralloss.NeutralLossPlot.java
NeutralLossPlot(NeutralLossVisualizerWindow visualizer, NeutralLossDataSet dataset, Object xAxisType) {
super(null, true);
this.visualizer = visualizer;
setBackground(Color.white);/*from w w w.ja va 2 s . co m*/
setCursor(Cursor.getPredefinedCursor(Cursor.CROSSHAIR_CURSOR));
NumberFormat rtFormat = MZmineCore.getConfiguration().getRTFormat();
NumberFormat mzFormat = MZmineCore.getConfiguration().getMZFormat();
// set the X axis (retention time) properties
NumberAxis xAxis;
if (xAxisType.equals(NeutralLossParameters.xAxisPrecursor)) {
xAxis = new NumberAxis("Precursor m/z");
xAxis.setNumberFormatOverride(mzFormat);
} else {
xAxis = new NumberAxis("Retention time");
xAxis.setNumberFormatOverride(rtFormat);
}
xAxis.setUpperMargin(0);
xAxis.setLowerMargin(0);
xAxis.setAutoRangeIncludesZero(false);
// set the Y axis (intensity) properties
NumberAxis yAxis = new NumberAxis("Neutral loss (Da)");
yAxis.setAutoRangeIncludesZero(false);
yAxis.setNumberFormatOverride(mzFormat);
yAxis.setUpperMargin(0);
yAxis.setLowerMargin(0);
// set the renderer properties
defaultRenderer = new NeutralLossDataPointRenderer(false, true);
defaultRenderer.setTransparency(0.4f);
setSeriesColorRenderer(0, pointColor, dataPointsShape);
setSeriesColorRenderer(1, searchPrecursorColor, dataPointsShape2);
setSeriesColorRenderer(2, searchNeutralLossColor, dataPointsShape2);
// tooltips
defaultRenderer.setBaseToolTipGenerator(dataset);
// set the plot properties
plot = new XYPlot(dataset, xAxis, yAxis, defaultRenderer);
plot.setBackgroundPaint(Color.white);
plot.setRenderer(defaultRenderer);
plot.setSeriesRenderingOrder(SeriesRenderingOrder.FORWARD);
// chart properties
chart = new JFreeChart("", titleFont, plot, false);
chart.setBackgroundPaint(Color.white);
setChart(chart);
// title
chartTitle = chart.getTitle();
chartTitle.setMargin(5, 0, 0, 0);
chartTitle.setFont(titleFont);
// disable maximum size (we don't want scaling)
setMaximumDrawWidth(Integer.MAX_VALUE);
setMaximumDrawHeight(Integer.MAX_VALUE);
// set crosshair (selection) properties
plot.setDomainCrosshairVisible(true);
plot.setRangeCrosshairVisible(true);
plot.setDomainCrosshairPaint(crossHairColor);
plot.setRangeCrosshairPaint(crossHairColor);
plot.setDomainCrosshairStroke(crossHairStroke);
plot.setRangeCrosshairStroke(crossHairStroke);
plot.addRangeMarker(new ValueMarker(0));
// set focusable state to receive key events
setFocusable(true);
// register key handlers
GUIUtils.registerKeyHandler(this, KeyStroke.getKeyStroke("SPACE"), visualizer, "SHOW_SPECTRUM");
// add items to popup menu
JPopupMenu popupMenu = getPopupMenu();
popupMenu.addSeparator();
JMenuItem highLightPrecursorRange = new JMenuItem("Highlight precursor m/z range...");
highLightPrecursorRange.addActionListener(visualizer);
highLightPrecursorRange.setActionCommand("HIGHLIGHT_PRECURSOR");
popupMenu.add(highLightPrecursorRange);
JMenuItem highLightNeutralLossRange = new JMenuItem("Highlight neutral loss m/z range...");
highLightNeutralLossRange.addActionListener(visualizer);
highLightNeutralLossRange.setActionCommand("HIGHLIGHT_NEUTRALLOSS");
popupMenu.add(highLightNeutralLossRange);
}
From source file:edu.ucla.stat.SOCR.chart.demo.DotChart.java
/** * Creates a chart.//from w w w . j a v a 2 s. c o m * * @param dataset the data for the chart. * * @return a chart. */ protected JFreeChart createChart1(XYDataset dataset) { //System.out.println("createChart1 called"); // create the chart... JFreeChart chart = ChartFactory.createXYLineChart(chartTitle, // chart title "", // x axis label domain rangeLabel, // y axis label range dataset, // data PlotOrientation.HORIZONTAL, !legendPanelOn, // include legend true, // tooltips false // urls ); // NOW DO SOME OPTIONAL CUSTOMISATION OF THE CHART... chart.setBackgroundPaint(Color.white); // get a reference to the plot for further customisation... XYPlot plot = (XYPlot) chart.getPlot(); plot.setBackgroundPaint(Color.white); plot.setAxisOffset(new RectangleInsets(5.0, 5.0, 5.0, 5.0)); plot.setDomainGridlinePaint(Color.lightGray); plot.setRangeGridlinePaint(Color.lightGray); XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) plot.getRenderer(); // renderer.setSeriesShape(0, java.awt.Shape.round); renderer.setBaseShapesVisible(true); renderer.setBaseShapesFilled(true); renderer.setBaseLinesVisible(false); renderer.setLegendItemLabelGenerator(new SOCRXYSeriesLabelGenerator()); //change the auto tick unit selection to integer units only... NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis(); rangeAxis.setStandardTickUnits(NumberAxis.createIntegerTickUnits()); rangeAxis.setAutoRangeIncludesZero(true); rangeAxis.setUpperMargin(0.01); rangeAxis.setLowerMargin(0.01); NumberAxis domainAxis = (NumberAxis) plot.getDomainAxis(); //domainAxis.setStandardTickUnits(NumberAxis.createIntegerTickUnits()); domainAxis.setAutoRangeIncludesZero(true); domainAxis.setTickLabelsVisible(false); domainAxis.setTickMarksVisible(false); domainAxis.setUpperMargin(5); domainAxis.setLowerMargin(0.01); // OPTIONAL CUSTOMISATION COMPLETED. setYSummary(dataset); try { // System.out.println("setting the common RangeAxis to null"); common_rangeAxis = null; common_rangeAxis = (NumberAxis) rangeAxis.clone(); // System.out.println("creating the common RangeAxis"); } catch (CloneNotSupportedException e) { System.out.println("CloneNotSupportedException!, exception caught"); } return chart; }