Example usage for org.jfree.chart.plot SeriesRenderingOrder REVERSE

List of usage examples for org.jfree.chart.plot SeriesRenderingOrder REVERSE

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In this page you can find the example usage for org.jfree.chart.plot SeriesRenderingOrder REVERSE.

Prototype

SeriesRenderingOrder REVERSE

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Document

Render series in the order N-1, N-2, ..., 2, 1, 0, where N is the number of series.

Usage

From source file:org.openfaces.component.chart.impl.plots.XYPlotAdapter.java

@Override
public boolean render(Graphics2D g2, Rectangle2D dataArea, int index, PlotRenderingInfo info,
        CrosshairState crosshairState) {
    final XYItemRenderer renderer = getRenderer();
    final boolean customRenderingModeEnabled = renderer instanceof AreaFillRenderer;

    if (!customRenderingModeEnabled) {
        return super.render(g2, dataArea, index, info, crosshairState);
    }/*w  ww  . j av a  2  s .c  o  m*/

    XYDataset xyDataset = getDataset(index);
    final boolean isDataSetNotEmpty = !DatasetUtilities.isEmptyOrNull(xyDataset);

    if (!isDataSetNotEmpty) {
        return false;
    }
    ValueAxis xValueAxis = getDomainAxisForDataset(index);
    ValueAxis yValueAxis = getRangeAxisForDataset(index);
    XYItemRenderer xyItemRenderer = findRenderer(index);

    if (xValueAxis == null || yValueAxis == null || xyItemRenderer == null) {
        return false;
    }

    XYItemRendererState state = xyItemRenderer.initialise(g2, dataArea, this, xyDataset, info);
    boolean isReverseSeriesRenderingOrder = getSeriesRenderingOrder() == SeriesRenderingOrder.REVERSE;
    int totalRendererPasses = xyItemRenderer.getPassCount();
    int totalSeries = xyDataset.getSeriesCount();

    if (isReverseSeriesRenderingOrder) {
        for (int seriesIndex = totalSeries - 1; seriesIndex >= 0; seriesIndex--) {
            renderItems(g2, dataArea, info, crosshairState, xyDataset, xValueAxis, yValueAxis, xyItemRenderer,
                    state, totalRendererPasses, seriesIndex);
        }
    } else {
        for (int seriesIndex = 0; seriesIndex < totalSeries; seriesIndex++) {
            renderItems(g2, dataArea, info, crosshairState, xyDataset, xValueAxis, yValueAxis, xyItemRenderer,
                    state, totalRendererPasses, seriesIndex);
        }
    }

    return true;
}

From source file:web.diva.server.model.PCAGenerator.java

public PCAImageResult generateChart(String path, PCAResults pcaResults, int[] subSelectionData, int[] selection,
        boolean zoom, boolean selectAll, String imgName, double w, double h, DivaDataset divaDataset) {
    XYDataset dataset = this.createDataset(pcaResults.getPoints(), subSelectionData, selection, zoom,
            divaDataset);/*from   w  ww.jav  a2  s  .  c  o m*/
    final JFreeChart chart = ChartFactory.createScatterPlot("", // chart title
            "Principal Component" + (pcaResults.getPcai() + 1), // x axis label
            "Principal Component " + (pcaResults.getPcaii() + 1), // y axis label
            dataset, // data
            PlotOrientation.VERTICAL, false, // include legend
            true, // tooltips
            false // urls
    );
    final XYPlot plot = chart.getXYPlot();
    plot.setBackgroundPaint(Color.WHITE);
    plot.setDomainGridlinePaint(Color.WHITE);
    plot.setRangeGridlinePaint(Color.WHITE);
    XYDotRenderer renderer = new XYDotRenderer();
    renderer.setDotHeight(5);
    renderer.setDotWidth(5);

    if (selectAll) {
        int i = 0;
        for (String col : seriesList.keySet()) {
            if (col.equalsIgnoreCase("unGrouped")) {
                col = "#000000";
            }
            renderer.setSeriesPaint(i, imgGenerator.hex2Rgb(col));
            i++;
        }

    } else if (selection == null) {
        renderer.setPaint(Color.LIGHT_GRAY);
        int i = 0;
        for (String col : seriesList.keySet()) {
            if (col.equalsIgnoreCase("unGrouped")) {
                col = "#000000";
            }
            renderer.setSeriesPaint(i, imgGenerator.hex2Rgb(col));
            i++;
        }
    } else {
        int i = 0;
        for (String col : seriesList.keySet()) {
            if (col.equalsIgnoreCase("unGrouped")) {
                renderer.setSeriesPaint(i, Color.LIGHT_GRAY);
            } else {
                renderer.setSeriesPaint(i, imgGenerator.hex2Rgb(col));

            }
            i++;
        }
    }
    plot.setRenderer(renderer);
    plot.setSeriesRenderingOrder(SeriesRenderingOrder.REVERSE);
    NumberAxis xAxis = new NumberAxis("Principal Component" + (pcaResults.getPcai() + 1));
    xAxis.setVerticalTickLabels(true);
    boolean auto = xAxis.getAutoRangeIncludesZero();
    xAxis.setAutoRangeIncludesZero(true ^ auto);
    NumberAxis yAxis = new NumberAxis("Principal Component" + (pcaResults.getPcaii() + 1));
    yAxis.setAutoRangeIncludesZero(true ^ auto);
    yAxis.setTickUnit(new NumberTickUnit(1));
    plot.setDomainAxis(0, xAxis);
    plot.setRangeAxis(0, yAxis);

    double MaxX = xAxis.getRange().getUpperBound();
    double MinX = xAxis.getRange().getLowerBound();
    double MaxY = yAxis.getRange().getUpperBound();
    double MinY = yAxis.getRange().getLowerBound();

    chartRenderingInfo.clear();
    String imgUrl = imgGenerator.saveToFile(chart, w, h, path, chartRenderingInfo, imgName);
    PCAImageResult imgUtilRes = new PCAImageResult();
    imgUtilRes.setImgString(imgUrl);
    imgUtilRes.setDataAreaMaxX(chartRenderingInfo.getPlotInfo().getDataArea().getMaxX());
    imgUtilRes.setDataAreaMaxY(chartRenderingInfo.getPlotInfo().getDataArea().getMaxY());
    imgUtilRes.setDataAreaMinY(chartRenderingInfo.getPlotInfo().getDataArea().getMinY());
    imgUtilRes.setDataAreaMinX(chartRenderingInfo.getPlotInfo().getDataArea().getMinX());
    imgUtilRes.setMaxX(MaxX);
    imgUtilRes.setMaxY(MaxY);
    imgUtilRes.setMinX(MinX);
    imgUtilRes.setMinY(MinY);
    return imgUtilRes;
}

From source file:web.diva.server.unused.ProfilePlotGenerator.java

/**
 * Creates a line chart (based on an {@link XYDataset}) with default
 * settings./*  ww  w . j a va 2  s. co  m*/
 *
 * @param title the chart title (<code>null</code> permitted).
 * @param xAxisLabel a label for the X-axis (<code>null</code> permitted).
 * @param yAxisLabel a label for the Y-axis (<code>null</code> permitted).
 * @param dataset the dataset for the chart (<code>null</code> permitted).
 * @param orientation the plot orientation (horizontal or vertical)
 * (<code>null</code> NOT permitted).
 * @param legend a flag specifying whether or not a legend is required.
 * @param tooltips configure chart to generate tool tips?
 * @param urls configure chart to generate URLs?
 *
 * @return The chart.
 */
private JFreeChart createXYLineChart(String title, String[] columnIds, XYDataset dataset,
        PlotOrientation orientation, boolean legend, boolean urls) {

    if (orientation == null) {
        throw new IllegalArgumentException("Null 'orientation' argument.");
    }
    Font f = new Font("ARIAL", 1, 7);
    //        NumberAxis xAxis = new NumberAxis(xAxisLabel);
    //        xAxis.setAutoRangeIncludesZero(false);
    SymbolAxis xAxis = new SymbolAxis("", columnIds);
    xAxis.setAxisLineVisible(false);
    xAxis.setGridBandsVisible(false);
    xAxis.setVerticalTickLabels(true);
    xAxis.setVisible(true);

    xAxis.setTickLabelPaint(shadowColor);
    xAxis.setTickLabelFont(f);
    xAxis.setFixedDimension(51.0);

    boolean auto = xAxis.getAutoRangeIncludesZero();
    xAxis.setAutoRangeIncludesZero(true ^ auto);
    xAxis.setTickUnit(new NumberTickUnit(1));
    xAxis.setRange(0, columnIds.length);
    //        NumberAxis yAxis = new NumberAxis(yAxisLabel);
    NumberAxis yAxis = new NumberAxis();
    yAxis.setAutoRangeIncludesZero(true ^ auto);
    yAxis.setAxisLineVisible(false);
    yAxis.setTickLabelFont(f);
    yAxis.setTickLabelPaint(Color.BLUE);

    XYLineAndShapeRenderer renderer = new XYLineAndShapeRenderer(true, false);
    renderer.setBaseShapesVisible(false);
    renderer.setPaint(shadowColor);

    XYPlot plot = new XYPlot(dataset, xAxis, yAxis, renderer);
    plot.setOrientation(orientation);

    plot.setBackgroundPaint(Color.WHITE);

    plot.setDomainGridlinePaint(shadowColor);
    plot.setRangeGridlinePaint(shadowColor);
    plot.setOutlinePaint(Color.BLUE);
    //        XYLineAndShapeRenderer renderer = new XYLineAndShapeRenderer();

    //        plot.setRenderer(renderer);
    plot.setSeriesRenderingOrder(SeriesRenderingOrder.REVERSE);

    plot.setDomainAxis(xAxis);

    if (urls) {
        renderer.setURLGenerator(new StandardXYURLGenerator());
    }

    JFreeChart chart = new JFreeChart(title, JFreeChart.DEFAULT_TITLE_FONT, plot, legend);
    return chart;

}

From source file:web.diva.server.unused.PCAGenerator.java

public PCAImageResult generateChart(String path, PCAResults pcaResults, int[] subSelectionData, int[] selection,
        boolean zoom, boolean selectAll, String imgName, double w, double h, DivaDataset divaDataset) {
    XYDataset dataset = this.createDataset(pcaResults.getPoints(), subSelectionData, selection, zoom,
            divaDataset);//from  w w w . j  a  v a2 s.  com
    final JFreeChart chart = ChartFactory.createScatterPlot("", // chart title
            "Principal Component" + (pcaResults.getPcai() + 1), // x axis label
            "Principal Component " + (pcaResults.getPcaii() + 1), // y axis label
            dataset, // data
            PlotOrientation.VERTICAL, false, // include legend
            true, // tooltips
            false // urls
    );
    final XYPlot plot = chart.getXYPlot();
    plot.setBackgroundPaint(Color.WHITE);
    plot.setDomainGridlinePaint(Color.WHITE);
    plot.setRangeGridlinePaint(Color.WHITE);
    XYDotRenderer renderer = new XYDotRenderer();
    renderer.setDotHeight(5);
    renderer.setDotWidth(5);

    if (selectAll) {
        int i = 0;
        for (String col : seriesList.keySet()) {
            if (col.equalsIgnoreCase("unGrouped")) {
                col = "#000000";
            }
            renderer.setSeriesPaint(i, imgGenerator.hex2Rgb(col));
            i++;
        }

    } else if (selection == null) {
        renderer.setPaint(Color.LIGHT_GRAY);
        int i = 0;
        for (String col : seriesList.keySet()) {
            if (col.equalsIgnoreCase("unGrouped")) {
                col = "#000000";
            }
            renderer.setSeriesPaint(i, imgGenerator.hex2Rgb(col));
            i++;
        }
    } else {
        int i = 0;
        for (String col : seriesList.keySet()) {
            if (col.equalsIgnoreCase("unGrouped")) {
                renderer.setSeriesPaint(i, Color.LIGHT_GRAY);
            } else {
                renderer.setSeriesPaint(i, imgGenerator.hex2Rgb(col));

            }
            i++;
        }
    }
    plot.setRenderer(renderer);
    plot.setSeriesRenderingOrder(SeriesRenderingOrder.REVERSE);
    NumberAxis xAxis = new NumberAxis("Principal Component" + (pcaResults.getPcai() + 1));
    xAxis.setVerticalTickLabels(true);
    boolean auto = xAxis.getAutoRangeIncludesZero();
    xAxis.setAutoRangeIncludesZero(true ^ auto);
    NumberAxis yAxis = new NumberAxis("Principal Component" + (pcaResults.getPcaii() + 1));
    yAxis.setAutoRangeIncludesZero(true ^ auto);
    yAxis.setTickUnit(new NumberTickUnit(1));
    plot.setDomainAxis(0, xAxis);
    plot.setRangeAxis(0, yAxis);

    double MaxX = xAxis.getRange().getUpperBound();
    double MinX = xAxis.getRange().getLowerBound();
    double MaxY = yAxis.getRange().getUpperBound();
    double MinY = yAxis.getRange().getLowerBound();

    chartRenderingInfo.clear();
    String imgUrl = imgGenerator.saveToFile(chart, w, h, chartRenderingInfo);
    PCAImageResult imgUtilRes = new PCAImageResult();
    imgUtilRes.setImgString(imgUrl);
    imgUtilRes.setDataAreaMaxX(chartRenderingInfo.getPlotInfo().getDataArea().getMaxX());
    imgUtilRes.setDataAreaMaxY(chartRenderingInfo.getPlotInfo().getDataArea().getMaxY());
    imgUtilRes.setDataAreaMinY(chartRenderingInfo.getPlotInfo().getDataArea().getMinY());
    imgUtilRes.setDataAreaMinX(chartRenderingInfo.getPlotInfo().getDataArea().getMinX());
    imgUtilRes.setMaxX(MaxX);
    imgUtilRes.setMaxY(MaxY);
    imgUtilRes.setMinX(MinX);
    imgUtilRes.setMinY(MinY);
    return imgUtilRes;
}

From source file:tools.descartes.bungee.chart.ChartGenerator.java

private static XYPlot createAllocationPlot(final TimeSeriesCollection dataset) {

    XYLineAndShapeRenderer renderer = new XYLineAndShapeRenderer();
    renderer.setBaseShapesVisible(true);
    renderer.setBaseShapesFilled(false);
    final NumberAxis rangeAxis = new NumberAxis("Resource Amount");
    rangeAxis.setAutoRangeIncludesZero(true);
    //rangeAxis.setTickUnit(new NumberTickUnit(1));
    double lower = Math.min(1, dataset.getRangeBounds(false).getLowerBound()) - 0.2;
    double upper = Math.max(2, dataset.getRangeBounds(false).getUpperBound()) + 0.2;
    rangeAxis.setRange(lower, upper);/*w w w .j  ava 2s. co  m*/
    final XYPlot allocationPlot = new XYPlot(dataset, null, rangeAxis, renderer);
    allocationPlot.setSeriesRenderingOrder(SeriesRenderingOrder.REVERSE);

    for (int i = 0; i < dataset.getSeriesCount(); i++) {
        TimeSeries series = dataset.getSeries(i);
        //addEndSeriesItem(lastDate, series);
        String description = series.getKey().toString();
        renderer.setSeriesStroke(i, new BasicStroke(STROKE_WIDTH));
        if (description.equals(AllocationSeries.CATEGORY.DEMAND.toString())) {
            renderer.setSeriesShapesVisible(i, false);
            renderer.setSeriesPaint(i, Color.RED);
        } else if (description.equals(SupplySeries.TYPE.VM_SCHEDULED.toString())) {
            renderer.setSeriesPaint(i, VARIANT_C_COLOR);
        } else if (description.equals(SupplySeries.TYPE.VM_COMPLETED.toString())) {
            renderer.setSeriesPaint(i, VARIANT_B_COLOR);
        } else if (description.equals(SupplySeries.TYPE.LB_RULE_ADAPTION.toString())) {
            if (dataset.getSeriesCount() != 2) {
                renderer.setSeriesPaint(i, VARIANT_A_COLOR);
            } else {
                renderer.setSeriesPaint(i, Color.BLUE);
            }
        } else if (description.equals(SupplySeries.TYPE.MONITORED.toString())) {
            if (dataset.getSeriesCount() != 2) {
                renderer.setSeriesPaint(i, VARIANT_D_COLOR);
            } else {
                renderer.setSeriesPaint(i, Color.BLUE);
            }
        } else {
            renderer.setSeriesPaint(i, colorForConfig(description));
        }
    }

    return allocationPlot;
}

From source file:probe.com.view.body.quantdatasetsoverview.quantproteinstabsheet.studies.ProteinStudyComparisonScatterPlotLayout.java

/**
 * Creates a sample jFreeChart.//from  ww  w  . j  av  a  2  s  . c o  m
 *
 * @param dataset the dataset.
 *
 * @return The jFreeChart.
 */
private void generateScatterplotchart(DiseaseGroupsComparisonsProteinLayout cp, int w, int h) {

    final XYSeriesCollection dataset = new XYSeriesCollection();
    XYSeries downSer = new XYSeries(0);
    XYSeries stableSer = new XYSeries(1);
    XYSeries upSer = new XYSeries(2);

    XYSeries novalueProvidedSer = new XYSeries(3);

    XYSeries downSerII = new XYSeries(4);
    XYSeries stableSerII = new XYSeries(5);
    XYSeries upSerII = new XYSeries(6);
    XYSeries novalueProvidedSerII = new XYSeries(7);

    //        XYSeries plusSeries = new XYSeries(6);
    double downCounter = 1;
    double stableCounter = 3;
    double upCounter = 5;
    double novalueProvidedCounter = 3;

    patientGroupsNumToDsIdMap.clear();

    final Map<Integer, int[]> paTGrNumbtrendMap = new HashMap<Integer, int[]>();
    double maxPatNumber = -1.0;
    for (String protTrend : cp.getPatientsNumToTrindMap().keySet()) {
        List<Integer> patNums = cp.getPatientsNumToTrindMap().get(protTrend);
        int coun = 0;
        for (int i : patNums) {
            if (i > maxPatNumber) {
                maxPatNumber = i;
            }
            if (!patientGroupsNumToDsIdMap.containsKey(i)) {
                ComparisonDetailsBean pGr = new ComparisonDetailsBean();
                patientGroupsNumToDsIdMap.put(i, pGr);

            }
            if (!paTGrNumbtrendMap.containsKey(i)) {
                int[] values = new int[4];
                paTGrNumbtrendMap.put(i, values);
            }

            int[] values = paTGrNumbtrendMap.get(i);
            ComparisonDetailsBean pGr = patientGroupsNumToDsIdMap.get(i);
            if (protTrend.equalsIgnoreCase("noValueProvided")) {
                values[3] = values[3] + 1;
                pGr.addNovalueProvided(cp.getDSID(3, coun));

            } else if (protTrend.equalsIgnoreCase("up")) {
                values[2] = values[2] + 1;

                pGr.addUpRegulated(cp.getDSID(0, coun));

            } else if (protTrend.equalsIgnoreCase("down")) {
                values[0] = values[0] + 1;
                pGr.addDownRegulated(cp.getDSID(2, coun));
            } else {
                values[1] = values[1] + 1;
                pGr.addNotRegulated(cp.getDSID(1, coun));
            }
            paTGrNumbtrendMap.put(i, values);
            patientGroupsNumToDsIdMap.put(i, pGr);
            coun++;
        }

    }

    for (int i : paTGrNumbtrendMap.keySet()) {
        int[] values = paTGrNumbtrendMap.get(i);
        if ((values[2] > 1)) {
            upSer.add(upCounter, i);
            upSerII.add(upCounter, i);
        } else if ((values[2] == 1)) {
            upSer.add(upCounter, i);
        }
        if ((values[1] == 1)) {
            stableSer.add(stableCounter, i);
        } else if ((values[1] > 1)) {
            stableSer.add(stableCounter, i);
            stableSerII.add(stableCounter, i);
        }

        if ((values[0] > 1)) {
            downSer.add(downCounter, i);
            downSerII.add(downCounter, i);
        } else if ((values[0] == 1)) {
            downSer.add(downCounter, i);
        }
        if ((values[3] == 1)) {
            novalueProvidedSer.add(novalueProvidedCounter, i);
        } else if ((values[3] > 1)) {
            novalueProvidedSer.add(stableCounter, i);
            novalueProvidedSerII.add(stableCounter, i);
        }

    }

    dataset.addSeries(downSer);
    dataset.addSeries(stableSer);
    dataset.addSeries(upSer);
    dataset.addSeries(novalueProvidedSer);
    dataset.addSeries(downSerII);
    dataset.addSeries(stableSerII);
    dataset.addSeries(upSerII);
    dataset.addSeries(novalueProvidedSerII);
    //        if((downSerII.getItemCount()+stableSerII.getItemCount()+upSerII.getItemCount()+downSer.getItemCount()+stableSer.getItemCount()+upSer.getItemCount())==0)
    //            return;
    //        dataset.addSeries(plusSeries);
    final String[] labels = new String[] { " ", ("Decreased (" + cp.getSignificantDown() + ")"), " ",
            ("Equal (" + cp.getStable() + ")"), " ", ("Increased (" + cp.getSignificantUp() + ")"), "" };
    final Color[] labelsColor = new Color[] { Color.LIGHT_GRAY, new Color(80, 183, 71), Color.LIGHT_GRAY,
            new Color(1, 141, 244), Color.LIGHT_GRAY, Color.RED, Color.LIGHT_GRAY };
    final SymbolAxis domainAxis = new SymbolAxis("X", labels) {

        @Override
        protected void drawGridBandsVertical(Graphics2D g2, Rectangle2D drawArea, Rectangle2D plotArea,
                boolean firstGridBandIsDark, List ticks) {
            List udatedTicksList = new ArrayList();

            for (Object tick : ticks) {
                if (tick.toString().equalsIgnoreCase(labels[custTrend + 1])) {
                    udatedTicksList.add(tick);
                }
            }
            //                System.out.println("at ticks is "+ticks);
            //                 System.out.println("at udatedTicksList is "+udatedTicksList);
            //                int factor = (int) ((plotArea.getHeight() / 5) * 0.25);
            //
            //                Rectangle2D up = new Rectangle((int) drawArea.getX(), (int) drawArea.getY() - factor, (int) drawArea.getWidth(), (int) drawArea.getHeight());
            //                Rectangle2D pa = new Rectangle((int) plotArea.getX(), (int) plotArea.getY() - factor, (int) plotArea.getWidth(), (int) plotArea.getHeight());

            super.drawGridBandsVertical(g2, drawArea, plotArea, firstGridBandIsDark, udatedTicksList); //To change body of generated methods, choose Tools | Templates.
        }

        int x = 0;

        @Override
        public Paint getTickLabelPaint() {
            if (x >= labels.length) {
                x = 0;
            }
            return labelsColor[x++];
        }

    };
    domainAxis.setAutoRangeIncludesZero(false);
    Font f = new Font("Verdana", Font.PLAIN, 11);
    domainAxis.setTickLabelFont(f);
    domainAxis.setAutoRange(false);
    domainAxis.setLabel(null);

    //        domainAxis.setGridBandsVisible(false);
    String xTile = "#Patients";

    JFreeChart jFreeChart = ChartFactory.createScatterPlot(null, null, // domain axis label
            null, // range axis label
            dataset, // data
            PlotOrientation.HORIZONTAL, // orientation
            false, // include legend
            false, // tooltips?
            false // URLs?
    );
    XYPlot plot1 = (XYPlot) jFreeChart.getPlot();
    XYPlot xyplot = new XYPlot(dataset, plot1.getDomainAxis(), plot1.getRangeAxis(), plot1.getRenderer()) {

        @Override
        public void drawDomainTickBands(Graphics2D g2, Rectangle2D dataArea, List ticks) {

            if (custTrend == -1) {
                super.drawDomainTickBands(g2, dataArea, ticks);
                return;

            }
            List udatedTicksList = new ArrayList();
            for (Object tick : ticks) {
                if (tick.toString().equalsIgnoreCase(labels[custTrend + 1])) {
                    udatedTicksList.add(tick);
                }
            }
            Rectangle2D up;
            int factor = (int) ((dataArea.getHeight() / 5) * 0.5);
            if (custTrend == 4) {
                up = new Rectangle((int) dataArea.getX(), (int) dataArea.getY() + factor,
                        (int) dataArea.getWidth(), (int) dataArea.getHeight());

            } else if (custTrend == 2) {
                up = new Rectangle((int) dataArea.getX(), (int) dataArea.getY() - factor,
                        (int) dataArea.getWidth(), (int) dataArea.getHeight());

            } else {
                up = new Rectangle((int) dataArea.getX(), (int) dataArea.getY() - factor,
                        (int) dataArea.getWidth(), (int) dataArea.getHeight());
            }

            super.drawDomainTickBands(g2, up, udatedTicksList); //To change body of generated methods, choose Tools | Templates.
        }

        @Override
        protected void drawDomainGridlines(Graphics2D g2, Rectangle2D dataArea, List ticks) {
            super.drawDomainGridlines(g2, dataArea, ticks); //To change body of generated methods, choose Tools | Templates.
        }

        private int x = 0;

        @Override
        public Paint getDomainGridlinePaint() {
            if (x >= labels.length) {
                x = 0;
            }
            if (x == 1 || x == 3 || x == 5) {
                x++;
                return Color.WHITE;
            } else {
                x++;
                return super.getDomainGridlinePaint(); //To change body of generated methods, choose Tools | Templates.
            }
        }
    };
    if (custTrend != -1) {
        domainAxis.setGridBandsVisible(true);
        if (custTrend == 4) {
            domainAxis.setGridBandPaint(Color.decode("#ffe5e5"));
            xyplot.setDomainTickBandPaint(Color.decode("#ffe5e5"));
            domainAxis.setGridBandAlternatePaint(Color.decode("#ffe5e5"));
        } else if (custTrend == 0) {
            domainAxis.setGridBandPaint(Color.decode("#e5ffe5"));
            xyplot.setDomainTickBandPaint(Color.white);
        } else if (custTrend == 2) {
            domainAxis.setGridBandPaint(Color.decode("#e6f4ff"));
            xyplot.setDomainTickBandPaint(Color.white);
        }

    } else {
        domainAxis.setGridBandsVisible(false);
    }
    xyplot.setOrientation(PlotOrientation.HORIZONTAL);
    JFreeChart tempScatterPlot = new JFreeChart(xyplot);
    tempScatterPlot.setBackgroundPaint(Color.WHITE);
    tempScatterPlot.getLegend().setVisible(false);
    Color c = new Color(242, 242, 242);
    xyplot.setDomainAxis(domainAxis);
    xyplot.setDomainGridlinePaint(Color.GRAY);
    xyplot.setDomainGridlinesVisible(true);
    xyplot.setRangeGridlinesVisible(true);
    xyplot.setRangeGridlinePaint(Color.GRAY);
    xyplot.setOutlinePaint(Color.GRAY);
    XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) xyplot.getRenderer();
    ValueAxis va = xyplot.getDomainAxis();
    va.setAutoRange(false);
    va.setMinorTickCount(0);
    va.setVisible(true);
    maxPatNumber = Math.ceil(maxPatNumber / 100.0) * 100;
    xyplot.getRangeAxis().setRange(0, maxPatNumber);
    NumberAxis rangeAxis = (NumberAxis) xyplot.getRangeAxis();
    rangeAxis.setTickUnit(new NumberTickUnit(10));
    rangeAxis.setLabel(xTile);
    rangeAxis.setLabelFont(f);
    rangeAxis.setLabelPaint(Color.GRAY);

    va.setRange(0, 6);
    xyplot.setBackgroundPaint(Color.WHITE);
    renderer.setUseOutlinePaint(true);

    Color c0 = new Color(80, 183, 71);
    renderer.setSeriesPaint(0, c0);
    renderer.setSeriesOutlinePaint(0, Color.WHITE);

    Color c1 = new Color(1, 141, 244);
    renderer.setSeriesPaint(1, c1);
    renderer.setSeriesOutlinePaint(1, Color.WHITE);

    Color c2 = new Color(204, 0, 0);
    renderer.setSeriesPaint(2, c2);
    renderer.setSeriesOutlinePaint(2, Color.WHITE);

    renderer.setSeriesPaint(3, Color.decode("#b5babb"));
    renderer.setSeriesOutlinePaint(3, Color.WHITE);

    renderer.setSeriesPaint(4, new Color(150, 212, 145));
    renderer.setSeriesOutlinePaint(4, new Color(150, 212, 145));

    renderer.setSeriesPaint(5, new Color(103, 187, 248));
    renderer.setSeriesOutlinePaint(5, new Color(103, 187, 248));

    renderer.setSeriesPaint(6, new Color(224, 102, 102));
    renderer.setSeriesOutlinePaint(6, new Color(224, 102, 102));

    renderer.setSeriesPaint(7, Color.decode("#b5babb"));
    renderer.setSeriesOutlinePaint(7, Color.GRAY);

    //        renderer.setSeriesPaint(6, Color.BLACK);
    //        renderer.setSeriesOutlinePaint(6, Color.BLACK);
    Shape downArr = ShapeUtilities.createDownTriangle(7f);
    Shape notRShape = ShapeUtilities.createDiamond(7f);
    Shape upArr = ShapeUtilities.createUpTriangle(7);

    Shape downArrII = ShapeUtilities.createTranslatedShape(ShapeUtilities.createDownTriangle(6f), 5, -5);
    Shape notRShapeII = ShapeUtilities.createTranslatedShape(ShapeUtilities.createDiamond(6f), 0, -7);
    Shape upArrII = ShapeUtilities.createTranslatedShape(ShapeUtilities.createUpTriangle(6f), 4, -4);

    //        Shape plus = ShapeUtilities.createTranslatedShape(ShapeUtilities.createRegularCross(3f, 0.4f), 11, -7);
    renderer.setSeriesShape(0, downArr);
    renderer.setSeriesShape(1, notRShape);
    renderer.setSeriesShape(2, upArr);

    renderer.setSeriesShape(3, notRShape);

    renderer.setSeriesShape(4, downArrII);
    renderer.setSeriesShape(5, notRShapeII);
    renderer.setSeriesShape(6, upArrII);

    renderer.setSeriesShape(7, notRShapeII);
    //       renderer.setSeriesShape(6, plus);

    renderer.setBaseItemLabelsVisible(true);
    renderer.setBaseItemLabelGenerator(new SymbolicXYItemLabelGenerator() {
        private final int[] indexer = new int[] { 0, 1, 2, 3, 0, 1, 2, 3 };

        @Override
        public String generateLabel(XYDataset dataset, int series, int category) {
            if (series > 3) {
                int patNumber = (int) dataset.getYValue(series, category);
                //                    int trend = (int) dataset.getXValue(series, category);
                if (series == 7 || series == 5) {
                    return "\t  " + paTGrNumbtrendMap.get(patNumber)[indexer[series]];
                } else {
                    return "\t   " + paTGrNumbtrendMap.get(patNumber)[indexer[series]];
                }

            }

            return ""; //To change body of generated methods, choose Tools | Templates.
        }

    });
    ItemLabelPosition position = new ItemLabelPosition(ItemLabelAnchor.OUTSIDE12, TextAnchor.BASELINE_LEFT,
            TextAnchor.TOP_LEFT, 0.0);

    renderer.setSeriesPositiveItemLabelPosition(4, position);
    renderer.setSeriesPositiveItemLabelPosition(5, position);
    renderer.setSeriesPositiveItemLabelPosition(6, position);
    renderer.setSeriesPositiveItemLabelPosition(7, position);

    renderer.setBaseItemLabelFont(f);

    tempScatterPlot.setBorderVisible(false);

    xyplot.setSeriesRenderingOrder(SeriesRenderingOrder.REVERSE);

    heighlightedScatterPlottImgUrl = saveToFile(tempScatterPlot, w, h, defaultScatterPlotRenderingInfo);

    xyplot.setBackgroundPaint(Color.WHITE);
    defaultScatterPlottImgUrl = saveToFile(tempScatterPlot, w, h, defaultScatterPlotRenderingInfo);

    //        xyplot.setBackgroundPaint(c);

    if (custTrend != -1) {
        domainAxis.setGridBandsVisible(true);
        if (custTrend == 4) {
            domainAxis.setGridBandPaint(Color.decode("#ffe5e5"));
            xyplot.setDomainTickBandPaint(Color.decode("#ffe5e5"));
            domainAxis.setGridBandAlternatePaint(Color.decode("#ffe5e5"));
        } else if (custTrend == 0) {
            domainAxis.setGridBandPaint(Color.decode("#e5ffe5"));
            xyplot.setDomainTickBandPaint(c);
        } else if (custTrend == 2) {
            domainAxis.setGridBandPaint(Color.decode("#e6f4ff"));
            xyplot.setDomainTickBandPaint(c);
        }

    }

    String textTitle = comparisonTitle.getValue().split("bold;'>")[1].replace("</font>", "");
    TextTitle title = new TextTitle(textTitle, f);

    scatterPlot = new JFreeChart(xyplot);
    scatterPlot.setTitle(title);

    scatterPlot.setBorderVisible(false);
    scatterPlot.setBackgroundPaint(Color.WHITE);
    scatterPlot.getLegend().setVisible(false);
    dsKeyDatasetMap.clear();
    for (int i = 0; i < defaultScatterPlotRenderingInfo.getEntityCollection().getEntityCount(); i++) {
        final ChartEntity entity = defaultScatterPlotRenderingInfo.getEntityCollection().getEntity(i);
        if (entity instanceof XYItemEntity) {

            int x = ((XYItemEntity) entity).getSeriesIndex();
            int y = ((XYItemEntity) entity).getItem();

            if (((XYItemEntity) entity).getDataset().getYValue(x,
                    y) > (int) ((XYItemEntity) entity).getDataset().getYValue(x, y)) {
                continue;
            }
            if (((XYItemEntity) entity).getSeriesIndex() > 3) {

                continue;
            }

            String[] arr = ((XYItemEntity) entity).getShapeCoords().split(",");
            int xSer = Integer.valueOf(arr[0]);
            int ySer = Integer.valueOf(arr[1]);
            int ySerEnd = Integer.valueOf(arr[3]);
            int patGrNumber = (int) ((XYItemEntity) entity).getDataset().getYValue(x, y);
            int trend = Integer.valueOf(((XYItemEntity) entity).getDataset()
                    .getSeriesKey(((XYItemEntity) entity).getSeriesIndex()).toString());

            ComparisonDetailsBean cpDetails = patientGroupsNumToDsIdMap.get(patGrNumber);
            List<Integer> dsList = cpDetails.getRegulatedList(trend);
            StringBuilder sb = new StringBuilder();

            for (int dsId : dsList) {
                QuantDatasetObject ds;

                sb.append("<h4>").append((Quant_Central_Manager.getFullQuantDatasetMap().get(dsId)).getAuthor())
                        .append(" ")
                        .append((Quant_Central_Manager.getFullQuantDatasetMap().get(dsId)).getYear())
                        .append("<h4/>");
                sb.append("<p></p>");
                ds = Quant_Central_Manager.getFullQuantDatasetMap().get(dsId);

                dsKeyDatasetMap.put("_-_" + dsId + "_-_" + comparisonProtein.getProteinAccssionNumber() + "_-_",
                        ds);
            }
            String tooltip = sb.toString().substring(0, sb.toString().length() - 7);
            SquaredDot square = new SquaredDot("squared");
            if (paTGrNumbtrendMap.get(patGrNumber)[trend] > 1) {
                square.setWidth(20 + "px");
                square.setHeight(15 + "px");
            } else {
                square.setWidth(10 + "px");
                square.setHeight(10 + "px");
            }
            square.setDescription(tooltip);
            square.setParam("trend", trend);
            square.setParam("pGrNumber", patGrNumber);
            int top = (ySer - 4);
            if (ySer > ySerEnd) {
                top = ySerEnd - 3;
            }
            defaultChartLayout.addComponent(square, "left: " + (xSer - 5) + "px; top: " + top + "px;");
        }
    }

}

From source file:ucar.unidata.idv.control.chart.MyXYPlot.java

/**
 * Draws a representation of the data within the dataArea region, using the
 * current renderer./*  w  ww. j ava2 s. c  o  m*/
 * <P>
 * The <code>info</code> and <code>crosshairState</code> arguments may be
 * <code>null</code>.
 *
 * @param g2  the graphics device.
 * @param dataArea  the region in which the data is to be drawn.
 * @param index  the dataset index.
 * @param info  an optional object for collection dimension information.
 * @param crosshairState  collects crosshair information
 *                        (<code>null</code> permitted).
 *
 * @return A flag that indicates whether any data was actually rendered.
 */
public boolean render(Graphics2D g2, Rectangle2D dataArea, int index, PlotRenderingInfo info,
        CrosshairState crosshairState) {

    boolean foundData = false;
    XYDataset dataset = getDataset(index);
    if (!DatasetUtilities.isEmptyOrNull(dataset)) {
        foundData = true;
        ValueAxis xAxis = getDomainAxisForDataset(index);
        ValueAxis yAxis = getRangeAxisForDataset(index);
        XYItemRenderer renderer = getRenderer(index);
        if (renderer == null) {
            renderer = getRenderer();
        }

        XYItemRendererState state = renderer.initialise(g2, dataArea, this, dataset, info);
        int passCount = renderer.getPassCount();

        SeriesRenderingOrder seriesOrder = getSeriesRenderingOrder();
        ucar.unidata.util.Trace.call1("render", " pass:" + passCount);
        if (seriesOrder == SeriesRenderingOrder.REVERSE) {
            //render series in reverse order
            for (int pass = 0; pass < passCount; pass++) {
                int seriesCount = dataset.getSeriesCount();
                for (int series = seriesCount - 1; series >= 0; series--) {
                    int itemCount = dataset.getItemCount(series);
                    ucar.unidata.util.Trace.call1("series loop",
                            " items=" + itemCount + " renderer:" + renderer.getClass().getName());
                    for (int item = 0; item < itemCount; item++) {
                        renderer.drawItem(g2, state, dataArea, info, this, xAxis, yAxis, dataset, series, item,
                                crosshairState, pass);
                    }
                    ucar.unidata.util.Trace.call2("series loop");
                }
            }
        } else {
            //render series in forward order
            for (int pass = 0; pass < passCount; pass++) {
                int seriesCount = dataset.getSeriesCount();
                for (int series = 0; series < seriesCount; series++) {
                    int itemCount = dataset.getItemCount(series);
                    for (int item = 0; item < itemCount; item++) {
                        renderer.drawItem(g2, state, dataArea, info, this, xAxis, yAxis, dataset, series, item,
                                crosshairState, pass);
                    }
                }
            }
        }
        ucar.unidata.util.Trace.call2("render");
    }
    return foundData;
}

From source file:org.fhcrc.cpl.viewer.gui.MRMDialog.java

/**
  * Draw a chart in a panel.  Good for precursors and daughters
  * @param parentPanel/* w w  w.  j  a  va  2  s  .com*/
  * @param dataset
  * @param domainMin
  * @param domainMax
  * @param supplier
  * @param wg
  */

protected void createChartInPanel(JPanel parentPanel, XYSeriesCollection dataset, Double domainMin,
        Double domainMax, DrawingSupplier supplier, whichGraph wg) {
    if (precursorChromatogramEmpty(transitionOnPlot) && wg == whichGraph.Precursor) {
        precursorContainerContainerPanel.setVisible(false);
        if (this.getWidth() >= 100 && this.getHeight() >= 100)
            this.setPreferredSize(new Dimension(this.getWidth(), this.getHeight()));
        pack();
        return;
    }
    switch (wg) {
    case Precursor:
        clearPreviousChartJunk(oldPrecursorChart);
        oldPrecursorChart = null;
        break;
    case Daughter:
        clearPreviousChartJunk(oldProductChart);
        oldProductChart = null;
        break;
    }

    JFreeChart chart = ChartFactory.createXYLineChart(null, "seconds", null, dataset, PlotOrientation.VERTICAL,
            true, false, false);

    chart.setBackgroundPaint(new Color(220, 220, 220));
    XYPlot xyp = (XYPlot) (chart.getPlot());
    xyp.setBackgroundPaint(Color.WHITE);
    xyp.setDomainGridlinesVisible(true);
    xyp.setRangeGridlinesVisible(true);
    xyp.setDomainGridlinePaint(Color.LIGHT_GRAY);
    xyp.setRangeGridlinePaint(Color.LIGHT_GRAY);
    if (supplier != null) {
        xyp.setDrawingSupplier(supplier);
    } else {
        xyp.setDrawingSupplier(Utils.plainDrawingSupplier(Color.LIGHT_GRAY));
    }
    xyp.setSeriesRenderingOrder(SeriesRenderingOrder.REVERSE);

    CenterZoomNumberAxis axisDomain = new CenterZoomNumberAxis("seconds");
    axisDomain.setAutoRangeIncludesZero(false);
    axisDomain.setRange(Math.max(0.0, domainMin), domainMax);
    axisDomain.addChangeListener(new domainAxisZoomCoordinator(axisDomain));

    xyp.clearAnnotations();
    xyp.setDomainAxis(axisDomain);
    xyp.getDomainAxis().setAutoRange(false);
    xyp.getRangeAxis().setAutoRange(false);
    XYLineAndShapeRenderer xylsr = (XYLineAndShapeRenderer) xyp.getRenderer();
    xylsr.setLegendLine(Utils.legendThing(16, 6));

    xylsr.setShapesFilled(true);
    xylsr.setBaseShapesFilled(true);
    PanelWithChart panelWithChart = new PanelWithChart(chart);
    ChartPanel cp = panelWithChart.getChartPanel();
    cp.removeMouseListener(cp);
    cp.removeMouseMotionListener(cp);
    if (peaksTable != null) {
        MRMerMouseListener mml = new MRMerMouseListener(cp, (PeaksTableModel) peaksTable.getModel());
        cp.addMouseListener(mml);
        cp.addMouseMotionListener(mml);
    }
    cp.setPreferredSize(new Dimension(parentPanel.getWidth(), parentPanel.getHeight() - 10));
    cp.setDomainZoomable(true);
    cp.setRangeZoomable(false);
    cp.setPopupMenu(null);
    parentPanel.removeAll();
    parentPanel.add(panelWithChart);

    switch (wg) {
    case Precursor:
        createChartInPanelPrecursorTasksOnly(xyp);
        oldPrecursorChart = xyp;
        break;
    case Daughter:
        createChartInPanelDaughterTasksOnly(xyp);
        oldProductChart = xyp;
        break;
    }
    parentPanel.updateUI();
    listTransition.requestFocus();
}