Example usage for org.jfree.chart.plot XYPlot XYPlot

List of usage examples for org.jfree.chart.plot XYPlot XYPlot

Introduction

In this page you can find the example usage for org.jfree.chart.plot XYPlot XYPlot.

Prototype

public XYPlot(XYDataset dataset, ValueAxis domainAxis, ValueAxis rangeAxis, XYItemRenderer renderer) 

Source Link

Document

Creates a new plot with the specified dataset, axes and renderer.

Usage

From source file:net.sf.maltcms.chromaui.charts.Chromatogram1DChartProvider.java

/**
 *
 * @param dataset/*from  ww  w  .j  av  a2s. com*/
 * @param tooltipGenerator
 * @param masses
 * @param massResolution
 * @param useRT
 * @return
 */
public XYPlot provide1DEICSUMPlot(EIC1DDataset dataset, SelectionAwareXYTooltipGenerator tooltipGenerator,
        double[] masses, double massResolution, boolean useRT) {
    String[] labels = new String[dataset.getSeriesCount()];
    for (int i = 0; i < labels.length; i++) {
        labels[i] = dataset.getSeriesKey(i) + "";
    }
    ValueAxis domainAxis = new NumberAxis("time [s]");
    ValueAxis rangeAxis = new NumberAxis("value");
    XYPlot plot = new XYPlot(dataset, domainAxis, rangeAxis, renderer);
    tooltipGenerator.setXYToolTipGenerator(new XYToolTipGenerator() {
        @Override
        public String generateToolTip(XYDataset xyd, int i, int i1) {
            Comparable comp = xyd.getSeriesKey(i);
            double x = xyd.getXValue(i, i1);
            double y = xyd.getYValue(i, i1);
            StringBuilder sb = new StringBuilder();
            sb.append(comp);
            sb.append(": ");
            sb.append("x=");
            sb.append(x);
            sb.append(" y=");
            sb.append(y);
            return sb.toString();
        }
    });
    plot.getRenderer().setBaseToolTipGenerator(tooltipGenerator);
    return plot;
}

From source file:org.drools.planner.benchmark.core.statistic.BenchmarkReport.java

private void writeAverageCalculateCountPerSecondSummaryChart() {
    NumberAxis xAxis = new NumberAxis("Problem scale");
    xAxis.setNumberFormatOverride(NumberFormat.getInstance(locale));
    NumberAxis yAxis = new NumberAxis("Average calculate count per second");
    yAxis.setNumberFormatOverride(NumberFormat.getInstance(locale));
    XYPlot plot = new XYPlot(null, xAxis, yAxis, null);
    int seriesIndex = 0;
    for (SolverBenchmark solverBenchmark : plannerBenchmark.getSolverBenchmarkList()) {
        String solverLabel = solverBenchmark.getNameWithFavoriteSuffix();
        XYSeries series = new XYSeries(solverLabel);
        for (SingleBenchmark singleBenchmark : solverBenchmark.getSingleBenchmarkList()) {
            if (singleBenchmark.isSuccess()) {
                long problemScale = singleBenchmark.getProblemBenchmark().getProblemScale();
                long averageCalculateCountPerSecond = singleBenchmark.getAverageCalculateCountPerSecond();
                series.add((Long) problemScale, (Long) averageCalculateCountPerSecond);
            }//from   w  ww  .  j a  va2 s.  c  o  m
        }
        XYSeriesCollection seriesCollection = new XYSeriesCollection();
        seriesCollection.addSeries(series);
        plot.setDataset(seriesIndex, seriesCollection);
        XYItemRenderer renderer = new StandardXYItemRenderer(StandardXYItemRenderer.SHAPES_AND_LINES);
        // Use dashed line
        renderer.setSeriesStroke(0, new BasicStroke(1.0f, BasicStroke.CAP_ROUND, BasicStroke.JOIN_ROUND, 1.0f,
                new float[] { 2.0f, 6.0f }, 0.0f));
        plot.setRenderer(seriesIndex, renderer);
        seriesIndex++;
    }
    plot.setOrientation(PlotOrientation.VERTICAL);
    JFreeChart chart = new JFreeChart("Average calculate count summary (higher is better)",
            JFreeChart.DEFAULT_TITLE_FONT, plot, true);
    averageCalculateCountSummaryChartFile = writeChartToImageFile(chart, "averageCalculateCountSummary");
}

From source file:com.tonbeller.jpivot.chart.ChartFactory.java

/**
 * Creates and returns a time series chart.
 * <P>//from www .j a  v  a  2 s  .  c  o m
 * A time series chart is an XYPlot with a date axis (horizontal) and a number axis (vertical),
 * and each data item is connected with a line.
 * <P>
 * Note that you can supply a TimeSeriesCollection to this method, as it implements the
 * XYDataset interface.
 *
 * @param title  the chart title.
 * @param timeAxisLabel  a label for the time axis.
 * @param valueAxisLabel  a label for the value axis.
 * @param data  the dataset for the chart.
 * @param legend  a flag specifying whether or not a legend is required.
 * @param tooltips  configure chart to generate tool tips?
 * @param urls  configure chart to generate URLs?
 *
 * @return a time series chart.
 */
public static JFreeChart createTimeSeriesChart(String title, java.awt.Font titleFont, String timeAxisLabel,
        String valueAxisLabel, XYDataset data, boolean legend, boolean tooltips, boolean urls) {

    ValueAxis timeAxis = new DateAxis(timeAxisLabel);
    timeAxis.setLowerMargin(0.02); // reduce the default margins on the time axis
    timeAxis.setUpperMargin(0.02);
    NumberAxis valueAxis = new NumberAxis(valueAxisLabel);
    valueAxis.setAutoRangeIncludesZero(false); // override default
    XYPlot plot = new XYPlot(data, timeAxis, valueAxis, null);

    XYToolTipGenerator tooltipGenerator = null;
    if (tooltips) {
        tooltipGenerator = StandardXYToolTipGenerator.getTimeSeriesInstance();
        //new StandardXYToolTipGenerator(DateFormat.getDateInstance());                                                
    }

    XYURLGenerator urlGenerator = null;
    if (urls) {
        urlGenerator = new StandardXYURLGenerator();
    }

    plot.setRenderer(new StandardXYItemRenderer(StandardXYItemRenderer.LINES, tooltipGenerator, urlGenerator));

    JFreeChart chart = new JFreeChart(title, JFreeChart.DEFAULT_TITLE_FONT, plot, legend);

    return chart;

}

From source file:probe.com.view.body.quantdatasetsoverview.quantproteinstabsheet.studies.ProteinStudyComparisonScatterPlotLayout.java

/**
 * Creates a sample jFreeChart.// www.  ja va 2  s  . c om
 *
 * @param dataset the dataset.
 *
 * @return The jFreeChart.
 */
private void generateScatterplotchart(DiseaseGroupsComparisonsProteinLayout cp, int w, int h) {

    final XYSeriesCollection dataset = new XYSeriesCollection();
    XYSeries downSer = new XYSeries(0);
    XYSeries stableSer = new XYSeries(1);
    XYSeries upSer = new XYSeries(2);

    XYSeries novalueProvidedSer = new XYSeries(3);

    XYSeries downSerII = new XYSeries(4);
    XYSeries stableSerII = new XYSeries(5);
    XYSeries upSerII = new XYSeries(6);
    XYSeries novalueProvidedSerII = new XYSeries(7);

    //        XYSeries plusSeries = new XYSeries(6);
    double downCounter = 1;
    double stableCounter = 3;
    double upCounter = 5;
    double novalueProvidedCounter = 3;

    patientGroupsNumToDsIdMap.clear();

    final Map<Integer, int[]> paTGrNumbtrendMap = new HashMap<Integer, int[]>();
    double maxPatNumber = -1.0;
    for (String protTrend : cp.getPatientsNumToTrindMap().keySet()) {
        List<Integer> patNums = cp.getPatientsNumToTrindMap().get(protTrend);
        int coun = 0;
        for (int i : patNums) {
            if (i > maxPatNumber) {
                maxPatNumber = i;
            }
            if (!patientGroupsNumToDsIdMap.containsKey(i)) {
                ComparisonDetailsBean pGr = new ComparisonDetailsBean();
                patientGroupsNumToDsIdMap.put(i, pGr);

            }
            if (!paTGrNumbtrendMap.containsKey(i)) {
                int[] values = new int[4];
                paTGrNumbtrendMap.put(i, values);
            }

            int[] values = paTGrNumbtrendMap.get(i);
            ComparisonDetailsBean pGr = patientGroupsNumToDsIdMap.get(i);
            if (protTrend.equalsIgnoreCase("noValueProvided")) {
                values[3] = values[3] + 1;
                pGr.addNovalueProvided(cp.getDSID(3, coun));

            } else if (protTrend.equalsIgnoreCase("up")) {
                values[2] = values[2] + 1;

                pGr.addUpRegulated(cp.getDSID(0, coun));

            } else if (protTrend.equalsIgnoreCase("down")) {
                values[0] = values[0] + 1;
                pGr.addDownRegulated(cp.getDSID(2, coun));
            } else {
                values[1] = values[1] + 1;
                pGr.addNotRegulated(cp.getDSID(1, coun));
            }
            paTGrNumbtrendMap.put(i, values);
            patientGroupsNumToDsIdMap.put(i, pGr);
            coun++;
        }

    }

    for (int i : paTGrNumbtrendMap.keySet()) {
        int[] values = paTGrNumbtrendMap.get(i);
        if ((values[2] > 1)) {
            upSer.add(upCounter, i);
            upSerII.add(upCounter, i);
        } else if ((values[2] == 1)) {
            upSer.add(upCounter, i);
        }
        if ((values[1] == 1)) {
            stableSer.add(stableCounter, i);
        } else if ((values[1] > 1)) {
            stableSer.add(stableCounter, i);
            stableSerII.add(stableCounter, i);
        }

        if ((values[0] > 1)) {
            downSer.add(downCounter, i);
            downSerII.add(downCounter, i);
        } else if ((values[0] == 1)) {
            downSer.add(downCounter, i);
        }
        if ((values[3] == 1)) {
            novalueProvidedSer.add(novalueProvidedCounter, i);
        } else if ((values[3] > 1)) {
            novalueProvidedSer.add(stableCounter, i);
            novalueProvidedSerII.add(stableCounter, i);
        }

    }

    dataset.addSeries(downSer);
    dataset.addSeries(stableSer);
    dataset.addSeries(upSer);
    dataset.addSeries(novalueProvidedSer);
    dataset.addSeries(downSerII);
    dataset.addSeries(stableSerII);
    dataset.addSeries(upSerII);
    dataset.addSeries(novalueProvidedSerII);
    //        if((downSerII.getItemCount()+stableSerII.getItemCount()+upSerII.getItemCount()+downSer.getItemCount()+stableSer.getItemCount()+upSer.getItemCount())==0)
    //            return;
    //        dataset.addSeries(plusSeries);
    final String[] labels = new String[] { " ", ("Decreased (" + cp.getSignificantDown() + ")"), " ",
            ("Equal (" + cp.getStable() + ")"), " ", ("Increased (" + cp.getSignificantUp() + ")"), "" };
    final Color[] labelsColor = new Color[] { Color.LIGHT_GRAY, new Color(80, 183, 71), Color.LIGHT_GRAY,
            new Color(1, 141, 244), Color.LIGHT_GRAY, Color.RED, Color.LIGHT_GRAY };
    final SymbolAxis domainAxis = new SymbolAxis("X", labels) {

        @Override
        protected void drawGridBandsVertical(Graphics2D g2, Rectangle2D drawArea, Rectangle2D plotArea,
                boolean firstGridBandIsDark, List ticks) {
            List udatedTicksList = new ArrayList();

            for (Object tick : ticks) {
                if (tick.toString().equalsIgnoreCase(labels[custTrend + 1])) {
                    udatedTicksList.add(tick);
                }
            }
            //                System.out.println("at ticks is "+ticks);
            //                 System.out.println("at udatedTicksList is "+udatedTicksList);
            //                int factor = (int) ((plotArea.getHeight() / 5) * 0.25);
            //
            //                Rectangle2D up = new Rectangle((int) drawArea.getX(), (int) drawArea.getY() - factor, (int) drawArea.getWidth(), (int) drawArea.getHeight());
            //                Rectangle2D pa = new Rectangle((int) plotArea.getX(), (int) plotArea.getY() - factor, (int) plotArea.getWidth(), (int) plotArea.getHeight());

            super.drawGridBandsVertical(g2, drawArea, plotArea, firstGridBandIsDark, udatedTicksList); //To change body of generated methods, choose Tools | Templates.
        }

        int x = 0;

        @Override
        public Paint getTickLabelPaint() {
            if (x >= labels.length) {
                x = 0;
            }
            return labelsColor[x++];
        }

    };
    domainAxis.setAutoRangeIncludesZero(false);
    Font f = new Font("Verdana", Font.PLAIN, 11);
    domainAxis.setTickLabelFont(f);
    domainAxis.setAutoRange(false);
    domainAxis.setLabel(null);

    //        domainAxis.setGridBandsVisible(false);
    String xTile = "#Patients";

    JFreeChart jFreeChart = ChartFactory.createScatterPlot(null, null, // domain axis label
            null, // range axis label
            dataset, // data
            PlotOrientation.HORIZONTAL, // orientation
            false, // include legend
            false, // tooltips?
            false // URLs?
    );
    XYPlot plot1 = (XYPlot) jFreeChart.getPlot();
    XYPlot xyplot = new XYPlot(dataset, plot1.getDomainAxis(), plot1.getRangeAxis(), plot1.getRenderer()) {

        @Override
        public void drawDomainTickBands(Graphics2D g2, Rectangle2D dataArea, List ticks) {

            if (custTrend == -1) {
                super.drawDomainTickBands(g2, dataArea, ticks);
                return;

            }
            List udatedTicksList = new ArrayList();
            for (Object tick : ticks) {
                if (tick.toString().equalsIgnoreCase(labels[custTrend + 1])) {
                    udatedTicksList.add(tick);
                }
            }
            Rectangle2D up;
            int factor = (int) ((dataArea.getHeight() / 5) * 0.5);
            if (custTrend == 4) {
                up = new Rectangle((int) dataArea.getX(), (int) dataArea.getY() + factor,
                        (int) dataArea.getWidth(), (int) dataArea.getHeight());

            } else if (custTrend == 2) {
                up = new Rectangle((int) dataArea.getX(), (int) dataArea.getY() - factor,
                        (int) dataArea.getWidth(), (int) dataArea.getHeight());

            } else {
                up = new Rectangle((int) dataArea.getX(), (int) dataArea.getY() - factor,
                        (int) dataArea.getWidth(), (int) dataArea.getHeight());
            }

            super.drawDomainTickBands(g2, up, udatedTicksList); //To change body of generated methods, choose Tools | Templates.
        }

        @Override
        protected void drawDomainGridlines(Graphics2D g2, Rectangle2D dataArea, List ticks) {
            super.drawDomainGridlines(g2, dataArea, ticks); //To change body of generated methods, choose Tools | Templates.
        }

        private int x = 0;

        @Override
        public Paint getDomainGridlinePaint() {
            if (x >= labels.length) {
                x = 0;
            }
            if (x == 1 || x == 3 || x == 5) {
                x++;
                return Color.WHITE;
            } else {
                x++;
                return super.getDomainGridlinePaint(); //To change body of generated methods, choose Tools | Templates.
            }
        }
    };
    if (custTrend != -1) {
        domainAxis.setGridBandsVisible(true);
        if (custTrend == 4) {
            domainAxis.setGridBandPaint(Color.decode("#ffe5e5"));
            xyplot.setDomainTickBandPaint(Color.decode("#ffe5e5"));
            domainAxis.setGridBandAlternatePaint(Color.decode("#ffe5e5"));
        } else if (custTrend == 0) {
            domainAxis.setGridBandPaint(Color.decode("#e5ffe5"));
            xyplot.setDomainTickBandPaint(Color.white);
        } else if (custTrend == 2) {
            domainAxis.setGridBandPaint(Color.decode("#e6f4ff"));
            xyplot.setDomainTickBandPaint(Color.white);
        }

    } else {
        domainAxis.setGridBandsVisible(false);
    }
    xyplot.setOrientation(PlotOrientation.HORIZONTAL);
    JFreeChart tempScatterPlot = new JFreeChart(xyplot);
    tempScatterPlot.setBackgroundPaint(Color.WHITE);
    tempScatterPlot.getLegend().setVisible(false);
    Color c = new Color(242, 242, 242);
    xyplot.setDomainAxis(domainAxis);
    xyplot.setDomainGridlinePaint(Color.GRAY);
    xyplot.setDomainGridlinesVisible(true);
    xyplot.setRangeGridlinesVisible(true);
    xyplot.setRangeGridlinePaint(Color.GRAY);
    xyplot.setOutlinePaint(Color.GRAY);
    XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) xyplot.getRenderer();
    ValueAxis va = xyplot.getDomainAxis();
    va.setAutoRange(false);
    va.setMinorTickCount(0);
    va.setVisible(true);
    maxPatNumber = Math.ceil(maxPatNumber / 100.0) * 100;
    xyplot.getRangeAxis().setRange(0, maxPatNumber);
    NumberAxis rangeAxis = (NumberAxis) xyplot.getRangeAxis();
    rangeAxis.setTickUnit(new NumberTickUnit(10));
    rangeAxis.setLabel(xTile);
    rangeAxis.setLabelFont(f);
    rangeAxis.setLabelPaint(Color.GRAY);

    va.setRange(0, 6);
    xyplot.setBackgroundPaint(Color.WHITE);
    renderer.setUseOutlinePaint(true);

    Color c0 = new Color(80, 183, 71);
    renderer.setSeriesPaint(0, c0);
    renderer.setSeriesOutlinePaint(0, Color.WHITE);

    Color c1 = new Color(1, 141, 244);
    renderer.setSeriesPaint(1, c1);
    renderer.setSeriesOutlinePaint(1, Color.WHITE);

    Color c2 = new Color(204, 0, 0);
    renderer.setSeriesPaint(2, c2);
    renderer.setSeriesOutlinePaint(2, Color.WHITE);

    renderer.setSeriesPaint(3, Color.decode("#b5babb"));
    renderer.setSeriesOutlinePaint(3, Color.WHITE);

    renderer.setSeriesPaint(4, new Color(150, 212, 145));
    renderer.setSeriesOutlinePaint(4, new Color(150, 212, 145));

    renderer.setSeriesPaint(5, new Color(103, 187, 248));
    renderer.setSeriesOutlinePaint(5, new Color(103, 187, 248));

    renderer.setSeriesPaint(6, new Color(224, 102, 102));
    renderer.setSeriesOutlinePaint(6, new Color(224, 102, 102));

    renderer.setSeriesPaint(7, Color.decode("#b5babb"));
    renderer.setSeriesOutlinePaint(7, Color.GRAY);

    //        renderer.setSeriesPaint(6, Color.BLACK);
    //        renderer.setSeriesOutlinePaint(6, Color.BLACK);
    Shape downArr = ShapeUtilities.createDownTriangle(7f);
    Shape notRShape = ShapeUtilities.createDiamond(7f);
    Shape upArr = ShapeUtilities.createUpTriangle(7);

    Shape downArrII = ShapeUtilities.createTranslatedShape(ShapeUtilities.createDownTriangle(6f), 5, -5);
    Shape notRShapeII = ShapeUtilities.createTranslatedShape(ShapeUtilities.createDiamond(6f), 0, -7);
    Shape upArrII = ShapeUtilities.createTranslatedShape(ShapeUtilities.createUpTriangle(6f), 4, -4);

    //        Shape plus = ShapeUtilities.createTranslatedShape(ShapeUtilities.createRegularCross(3f, 0.4f), 11, -7);
    renderer.setSeriesShape(0, downArr);
    renderer.setSeriesShape(1, notRShape);
    renderer.setSeriesShape(2, upArr);

    renderer.setSeriesShape(3, notRShape);

    renderer.setSeriesShape(4, downArrII);
    renderer.setSeriesShape(5, notRShapeII);
    renderer.setSeriesShape(6, upArrII);

    renderer.setSeriesShape(7, notRShapeII);
    //       renderer.setSeriesShape(6, plus);

    renderer.setBaseItemLabelsVisible(true);
    renderer.setBaseItemLabelGenerator(new SymbolicXYItemLabelGenerator() {
        private final int[] indexer = new int[] { 0, 1, 2, 3, 0, 1, 2, 3 };

        @Override
        public String generateLabel(XYDataset dataset, int series, int category) {
            if (series > 3) {
                int patNumber = (int) dataset.getYValue(series, category);
                //                    int trend = (int) dataset.getXValue(series, category);
                if (series == 7 || series == 5) {
                    return "\t  " + paTGrNumbtrendMap.get(patNumber)[indexer[series]];
                } else {
                    return "\t   " + paTGrNumbtrendMap.get(patNumber)[indexer[series]];
                }

            }

            return ""; //To change body of generated methods, choose Tools | Templates.
        }

    });
    ItemLabelPosition position = new ItemLabelPosition(ItemLabelAnchor.OUTSIDE12, TextAnchor.BASELINE_LEFT,
            TextAnchor.TOP_LEFT, 0.0);

    renderer.setSeriesPositiveItemLabelPosition(4, position);
    renderer.setSeriesPositiveItemLabelPosition(5, position);
    renderer.setSeriesPositiveItemLabelPosition(6, position);
    renderer.setSeriesPositiveItemLabelPosition(7, position);

    renderer.setBaseItemLabelFont(f);

    tempScatterPlot.setBorderVisible(false);

    xyplot.setSeriesRenderingOrder(SeriesRenderingOrder.REVERSE);

    heighlightedScatterPlottImgUrl = saveToFile(tempScatterPlot, w, h, defaultScatterPlotRenderingInfo);

    xyplot.setBackgroundPaint(Color.WHITE);
    defaultScatterPlottImgUrl = saveToFile(tempScatterPlot, w, h, defaultScatterPlotRenderingInfo);

    //        xyplot.setBackgroundPaint(c);

    if (custTrend != -1) {
        domainAxis.setGridBandsVisible(true);
        if (custTrend == 4) {
            domainAxis.setGridBandPaint(Color.decode("#ffe5e5"));
            xyplot.setDomainTickBandPaint(Color.decode("#ffe5e5"));
            domainAxis.setGridBandAlternatePaint(Color.decode("#ffe5e5"));
        } else if (custTrend == 0) {
            domainAxis.setGridBandPaint(Color.decode("#e5ffe5"));
            xyplot.setDomainTickBandPaint(c);
        } else if (custTrend == 2) {
            domainAxis.setGridBandPaint(Color.decode("#e6f4ff"));
            xyplot.setDomainTickBandPaint(c);
        }

    }

    String textTitle = comparisonTitle.getValue().split("bold;'>")[1].replace("</font>", "");
    TextTitle title = new TextTitle(textTitle, f);

    scatterPlot = new JFreeChart(xyplot);
    scatterPlot.setTitle(title);

    scatterPlot.setBorderVisible(false);
    scatterPlot.setBackgroundPaint(Color.WHITE);
    scatterPlot.getLegend().setVisible(false);
    dsKeyDatasetMap.clear();
    for (int i = 0; i < defaultScatterPlotRenderingInfo.getEntityCollection().getEntityCount(); i++) {
        final ChartEntity entity = defaultScatterPlotRenderingInfo.getEntityCollection().getEntity(i);
        if (entity instanceof XYItemEntity) {

            int x = ((XYItemEntity) entity).getSeriesIndex();
            int y = ((XYItemEntity) entity).getItem();

            if (((XYItemEntity) entity).getDataset().getYValue(x,
                    y) > (int) ((XYItemEntity) entity).getDataset().getYValue(x, y)) {
                continue;
            }
            if (((XYItemEntity) entity).getSeriesIndex() > 3) {

                continue;
            }

            String[] arr = ((XYItemEntity) entity).getShapeCoords().split(",");
            int xSer = Integer.valueOf(arr[0]);
            int ySer = Integer.valueOf(arr[1]);
            int ySerEnd = Integer.valueOf(arr[3]);
            int patGrNumber = (int) ((XYItemEntity) entity).getDataset().getYValue(x, y);
            int trend = Integer.valueOf(((XYItemEntity) entity).getDataset()
                    .getSeriesKey(((XYItemEntity) entity).getSeriesIndex()).toString());

            ComparisonDetailsBean cpDetails = patientGroupsNumToDsIdMap.get(patGrNumber);
            List<Integer> dsList = cpDetails.getRegulatedList(trend);
            StringBuilder sb = new StringBuilder();

            for (int dsId : dsList) {
                QuantDatasetObject ds;

                sb.append("<h4>").append((Quant_Central_Manager.getFullQuantDatasetMap().get(dsId)).getAuthor())
                        .append(" ")
                        .append((Quant_Central_Manager.getFullQuantDatasetMap().get(dsId)).getYear())
                        .append("<h4/>");
                sb.append("<p></p>");
                ds = Quant_Central_Manager.getFullQuantDatasetMap().get(dsId);

                dsKeyDatasetMap.put("_-_" + dsId + "_-_" + comparisonProtein.getProteinAccssionNumber() + "_-_",
                        ds);
            }
            String tooltip = sb.toString().substring(0, sb.toString().length() - 7);
            SquaredDot square = new SquaredDot("squared");
            if (paTGrNumbtrendMap.get(patGrNumber)[trend] > 1) {
                square.setWidth(20 + "px");
                square.setHeight(15 + "px");
            } else {
                square.setWidth(10 + "px");
                square.setHeight(10 + "px");
            }
            square.setDescription(tooltip);
            square.setParam("trend", trend);
            square.setParam("pGrNumber", patGrNumber);
            int top = (ySer - 4);
            if (ySer > ySerEnd) {
                top = ySerEnd - 3;
            }
            defaultChartLayout.addComponent(square, "left: " + (xSer - 5) + "px; top: " + top + "px;");
        }
    }

}

From source file:jboost.visualization.HistogramFrame.java

private JFreeChart createHistogramChart() {

    XYBarRenderer renderer1 = new XYBarRenderer();
    renderer1.setSeriesPaint(0, Color.cyan);
    renderer1.setSeriesPaint(1, Color.pink);

    XYPlot histPlot = new XYPlot(histogramDataset, null, new NumberAxis("count"), renderer1);

    XYBarRenderer renderer2 = new XYBarRenderer();
    renderer2.setSeriesPaint(0, Color.green);
    renderer2.setSeriesPaint(1, Color.orange);
    renderer2.setUseYInterval(true);//from   ww  w  . ja va2s.  c o  m

    // weight and potential
    if (infoParser.isRobustBoost || infoParser.isAdaBoost || infoParser.isLogLossBoost) {
        StandardXYItemRenderer renderer3 = new StandardXYItemRenderer();
        renderer3.setSeriesPaint(0, Color.blue);
        renderer3.setSeriesPaint(1, Color.red);
        renderer3.setBaseStroke(new BasicStroke(2));

        StandardXYItemRenderer renderer4 = new StandardXYItemRenderer();
        renderer4.setSeriesPaint(0, Color.blue);
        renderer4.setSeriesPaint(1, Color.red);
        renderer4.setBaseStroke(
                new BasicStroke(2, BasicStroke.CAP_BUTT, BasicStroke.JOIN_MITER, 2, new float[] { 2 }, 0));

        histPlot.setDataset(1, weightDataset);
        histPlot.setRenderer(1, renderer3);

        histPlot.setDataset(2, potentialDataset);
        histPlot.setRenderer(2, renderer4);

        histPlot.setDatasetRenderingOrder(DatasetRenderingOrder.FORWARD);
    }

    XYPlot fluctPlot = new XYPlot(fluctDataset, null, new NumberAxis("bin"), renderer2);

    double initialLocation = (upper_limit + lower_limit) / 2.0;
    histMarker = new IntervalMarker(initialLocation, initialLocation);
    histPlot.addDomainMarker(histMarker, Layer.BACKGROUND);
    fluctPlot.addDomainMarker(histMarker, Layer.BACKGROUND);

    // plot.setBackgroundPaint(Color.lightGray);
    // plot.setDomainGridlinePaint(Color.white);
    // plot.setRangeGridlinePaint(Color.white);

    CombinedDomainXYPlot combinedPlot = new CombinedDomainXYPlot(new NumberAxis("score"));
    combinedPlot.setGap(10.0);

    // add the subplots...
    ValueAxis axis = new NumberAxis();
    axis.setRange(rawData.getMinRange(iter), rawData.getMaxRange(iter));
    combinedPlot.add(histPlot, 3);
    combinedPlot.add(fluctPlot, 1);
    combinedPlot.setOrientation(PlotOrientation.VERTICAL);
    combinedPlot.setDomainAxis(axis);

    JFreeChart chart = new JFreeChart("Histogram", JFreeChart.DEFAULT_TITLE_FONT, combinedPlot, false // legend
    );

    return chart;
}

From source file:weka.classifiers.timeseries.eval.graph.JFreeChartDriver.java

protected JFreeChart getPredictedStepsChart(TSForecaster forecaster, List<ErrorModule> preds, String targetName,
        List<Integer> stepsToPlot, int instanceNumOffset, Instances data) {

    if (forecaster instanceof TSLagUser && data != null) {
        TSLagMaker lagMaker = ((TSLagUser) forecaster).getTSLagMaker();
        if (lagMaker.getAdjustForTrends() && !lagMaker.isUsingAnArtificialTimeIndex()) {

            // fill in any missing time stamps only
            data = new Instances(data);
            data = weka.classifiers.timeseries.core.Utils.replaceMissing(data, null,
                    lagMaker.getTimeStampField(), true, lagMaker.getPeriodicity(), lagMaker.getSkipEntries());
        }//  w w w  .j a v a  2  s.c  o m
    }

    // set up a collection of predicted series
    XYIntervalSeriesCollection xyDataset = new XYIntervalSeriesCollection();

    XYIntervalSeries targetSeries = new XYIntervalSeries(targetName, false, false);
    xyDataset.addSeries(targetSeries);
    // for (int i = 0; i < preds.size(); i++) {
    for (int z = 0; z < stepsToPlot.size(); z++) {
        int i = stepsToPlot.get(z);
        i--;
        // ignore out of range steps
        if (i < 0 || i >= preds.size()) {
            continue;
        }

        String step = "-steps";
        if (i == 0) {
            step = "-step";
        }
        targetSeries = new XYIntervalSeries(targetName + "_" + (i + 1) + step + "-ahead", false, false);
        xyDataset.addSeries(targetSeries);
    }

    ValueAxis timeAxis = null;
    NumberAxis valueAxis = new NumberAxis("");
    valueAxis.setAutoRangeIncludesZero(false);
    int timeIndex = -1;
    boolean timeAxisIsDate = false;
    if (forecaster instanceof TSLagUser && data != null) {
        TSLagMaker lagMaker = ((TSLagUser) forecaster).getTSLagMaker();
        if (!lagMaker.isUsingAnArtificialTimeIndex() && lagMaker.getAdjustForTrends()) {
            String timeName = lagMaker.getTimeStampField();
            if (data.attribute(timeName).isDate()) {
                timeAxis = new DateAxis("");
                timeAxisIsDate = true;
                timeIndex = data.attribute(timeName).index();
            }
        }
    }

    if (timeAxis == null) {
        timeAxis = new NumberAxis("");
        ((NumberAxis) timeAxis).setAutoRangeIncludesZero(false);
    }

    // now populate the series
    // for (int i = 0; i < preds.size(); i++) {
    boolean doneActual = false;
    boolean hasConfidenceIntervals = false;
    for (int z = 0; z < stepsToPlot.size(); z++) {
        int i = stepsToPlot.get(z);
        i--;

        // ignore out of range steps
        if (i < 0 || i >= preds.size()) {
            continue;
        }
        ErrorModule predsForStepI = preds.get(i);
        List<NumericPrediction> predsForTargetAtI = predsForStepI.getPredictionsForTarget(targetName);

        String step = "-steps";
        if (i == 0) {
            step = "-step";
        }
        int predIndex = xyDataset.indexOf(targetName + "_" + (i + 1) + step + "-ahead");
        XYIntervalSeries predSeries = xyDataset.getSeries(predIndex);
        XYIntervalSeries actualSeries = null;
        if (!doneActual) {
            int actualIndex = xyDataset.indexOf(targetName);
            actualSeries = xyDataset.getSeries(actualIndex);
        }

        for (int j = 0; j < predsForTargetAtI.size(); j++) {
            double x = Utils.missingValue();
            if (timeAxisIsDate) {
                if (instanceNumOffset + j + i < data.numInstances()) {
                    x = data.instance(instanceNumOffset + j + i).value(timeIndex);
                }
            } else {
                x = instanceNumOffset + j + i;
            }

            double yPredicted = predsForTargetAtI.get(j).predicted();
            double yHigh = yPredicted;
            double yLow = yPredicted;
            double[][] conf = predsForTargetAtI.get(j).predictionIntervals();
            if (conf.length > 0) {
                yLow = conf[0][0];
                yHigh = conf[0][1];
                hasConfidenceIntervals = true;
            }
            if (!Utils.isMissingValue(x) && !Utils.isMissingValue(yPredicted)) {
                if (predSeries != null) {
                    predSeries.add(x, x, x, yPredicted, yLow, yHigh);
                }
                // System.err.println("* " + yPredicted + " " + x);
            }

            if (!doneActual && actualSeries != null) {
                double yActual = predsForTargetAtI.get(j).actual();
                if (!Utils.isMissingValue(x) && !Utils.isMissingValue(yActual)) {
                    actualSeries.add(x, x, x, yActual, yActual, yActual);
                }
            }
        }

        if (actualSeries != null) {
            doneActual = true;
        }
    }

    // set up the chart
    String title = "";
    for (int i : stepsToPlot) {
        title += i + ",";
    }
    title = title.substring(0, title.lastIndexOf(","));
    title += " step-ahead predictions for " + targetName;

    /*
     * String algoSpec = forecaster.getAlgorithmName(); title += " (" + algoSpec
     * + ")";
     */

    if (forecaster instanceof WekaForecaster && hasConfidenceIntervals) {
        double confPerc = ((WekaForecaster) forecaster).getConfidenceLevel() * 100.0;
        title += " [" + Utils.doubleToString(confPerc, 0) + "% conf. intervals]";
    }

    XYErrorRenderer renderer = new XYErrorRenderer();
    renderer.setBaseLinesVisible(true);
    // renderer.setShapesFilled(true);
    XYPlot plot = new XYPlot(xyDataset, timeAxis, valueAxis, renderer);
    JFreeChart chart = new JFreeChart(title, JFreeChart.DEFAULT_TITLE_FONT, plot, true);
    chart.setBackgroundPaint(java.awt.Color.white);
    TextTitle chartTitle = chart.getTitle();
    String fontName = chartTitle.getFont().getFontName();
    java.awt.Font newFont = new java.awt.Font(fontName, java.awt.Font.PLAIN, 12);
    chartTitle.setFont(newFont);

    return chart;
}

From source file:tools.descartes.bungee.chart.ChartGenerator.java

public static XYPlot createDemandPlot(final List<ArrivalRateTuple> intensities,
        final IntensityDemandMapping mapping) {
    final TimeSeriesCollection dataset = new TimeSeriesCollection();
    final TimeSeries series = new TimeSeries("resource demand");
    for (ArrivalRateTuple intensity : intensities) {
        long milliseconds = (referenceDate.getTime() / 1000 + (long) Math.floor(intensity.getTimeStamp()))
                * 1000;// w w  w .  j a  v a2s  . c om
        series.add(new FixedMillisecond(milliseconds), mapping.getResourceDemand(intensity.getArrivalRate()));
    }
    dataset.addSeries(series);

    XYStepRenderer renderer = new XYStepRenderer();
    renderer.setSeriesPaint(0, Color.RED);
    renderer.setSeriesStroke(0, new BasicStroke(STROKE_WIDTH));
    final NumberAxis rangeAxis = new NumberAxis("Resource Amount");
    rangeAxis.setAutoRangeIncludesZero(true);
    //rangeAxis.setRange(0,2.2);
    rangeAxis.setTickUnit(new NumberTickUnit(2));
    final XYPlot amountPlot = new XYPlot(dataset, null, rangeAxis, renderer);
    return amountPlot;
}

From source file:org.pentaho.platform.uifoundation.chart.JFreeChartEngine.java

private static JFreeChart createTimeSeriesCollectionChart(
        final TimeSeriesCollectionChartDefinition chartDefinition) {
    JFreeChart chart = null;//  w  w w.  jav  a 2s.  c om
    // TODO Make the following accessible from the chartDefinition
    String domainAxisLabel = null;
    String rangeAxisLabel = null;
    boolean tooltips = true;
    boolean urls = true;
    // -----------------------------------------------------------

    String title = chartDefinition.getTitle();
    boolean legend = chartDefinition.isLegendIncluded();

    DateAxis domainAxis = new DateAxis(domainAxisLabel, TimeZone.getDefault());
    ValueAxis rangeAxis = new NumberAxis(rangeAxisLabel);

    XYItemRenderer renderer = null;
    switch (chartDefinition.getChartType()) {
    case LINE_CHART_TYPE:
        renderer = chartDefinition.isThreeD() ? new XYLine3DRenderer()
                : new XYLineAndShapeRenderer(true, false);
        ((XYLineAndShapeRenderer) renderer).setShapesVisible(chartDefinition.isMarkersVisible());
        ((XYLineAndShapeRenderer) renderer).setBaseShapesFilled(chartDefinition.isMarkersVisible());
        break;
    case AREA_CHART_TYPE:
        renderer = new XYAreaRenderer();
        break;
    case STEP_CHART_TYPE:
        renderer = new XYStepRenderer();
        break;
    case STEP_AREA_CHART_TYPE:
        renderer = new XYStepAreaRenderer();
        break;
    case DIFFERENCE_CHART_TYPE:
        renderer = new XYDifferenceRenderer();
        break;
    case DOT_CHART_TYPE:
        renderer = new XYDotRenderer();
        ((XYDotRenderer) renderer).setDotHeight(chartDefinition.getDotHeight());
        ((XYDotRenderer) renderer).setDotWidth(chartDefinition.getDotWidth());
        break;
    default:
        // should log an error if invalid chart type passed in - at least return null for no renderer
        return null;
    }
    if (tooltips) {
        XYToolTipGenerator generator = new StandardXYToolTipGenerator(chartDefinition.getTooltipContent(),
                new SimpleDateFormat(chartDefinition.getTooltipXFormat()),
                new DecimalFormat(chartDefinition.getTooltipYFormat()));
        renderer.setToolTipGenerator(generator);
    }
    if (urls) {
        renderer.setURLGenerator(new StandardXYURLGenerator());
    }

    renderer.setStroke(JFreeChartEngine.getLineStyleStroke(chartDefinition.getLineStyle(),
            chartDefinition.getLineWidth()));

    XYPlot plot = new XYPlot(chartDefinition, domainAxis, rangeAxis, renderer);
    JFreeChartEngine.updatePlot(plot, chartDefinition);

    chart = new JFreeChart(title, JFreeChart.DEFAULT_TITLE_FONT, plot, legend);

    return chart;

}

From source file:org.hxzon.demo.jfreechart.XYDatasetDemo2.java

private static JFreeChart createXYBarChart(XYDataset dataset) {
    boolean dateAxis = true;
    ValueAxis domainAxis = null;// ww w. jav a2  s. com
    if (dateAxis) {
        domainAxis = new DateAxis(xAxisLabel);
    } else {
        NumberAxis axis = new NumberAxis(xAxisLabel);
        axis.setAutoRangeIncludesZero(false);
        domainAxis = axis;
    }
    ValueAxis valueAxis = new NumberAxis(yAxisLabel);

    XYBarRenderer renderer = new XYBarRenderer();
    if (tooltips) {
        XYToolTipGenerator tt;
        if (dateAxis) {
            tt = StandardXYToolTipGenerator.getTimeSeriesInstance();
        } else {
            tt = new StandardXYToolTipGenerator();
        }
        renderer.setBaseToolTipGenerator(tt);
    }
    if (urls) {
        renderer.setURLGenerator(new StandardXYURLGenerator());
    }

    XYPlot plot = new XYPlot(dataset, domainAxis, valueAxis, renderer);
    plot.setOrientation(orientation);

    JFreeChart chart = new JFreeChart("XYBar Chart Demo", JFreeChart.DEFAULT_TITLE_FONT, plot, legend);
    chart.setBackgroundPaint(Color.white);

    plot.setBackgroundPaint(Color.lightGray);
    plot.setDomainGridlinePaint(Color.white);
    plot.setRangeGridlinePaint(Color.white);
    plot.setAxisOffset(new RectangleInsets(5.0, 5.0, 5.0, 5.0));
    plot.setDomainCrosshairVisible(true);
    plot.setRangeCrosshairVisible(true);

    return chart;
}

From source file:net.sf.maltcms.chromaui.charts.Chromatogram1DChartProvider.java

/**
 *
 * @param dataset/*w ww  .j a  va  2  s.  com*/
 * @param tooltipGenerator
 * @param masses
 * @param massResolution
 * @param useRT
 * @return
 */
public XYPlot provide1DEICCOPlot(EIC1DDataset dataset, SelectionAwareXYTooltipGenerator tooltipGenerator,
        double[] masses, double massResolution, boolean useRT) {
    String[] labels = new String[dataset.getSeriesCount()];
    for (int i = 0; i < labels.length; i++) {
        labels[i] = dataset.getSeriesKey(i) + "";
    }
    ValueAxis domainAxis = new NumberAxis("time [s]");
    ValueAxis rangeAxis = new NumberAxis("value");
    XYPlot plot = new XYPlot(dataset, domainAxis, rangeAxis, renderer);
    tooltipGenerator.setXYToolTipGenerator(new XYToolTipGenerator() {
        @Override
        public String generateToolTip(XYDataset xyd, int i, int i1) {
            Comparable comp = xyd.getSeriesKey(i);
            double x = xyd.getXValue(i, i1);
            double y = xyd.getYValue(i, i1);
            StringBuilder sb = new StringBuilder();
            sb.append(comp);
            sb.append(": ");
            sb.append("x=");
            sb.append(x);
            sb.append(" y=");
            sb.append(y);
            return sb.toString();
        }
    });
    plot.getRenderer().setBaseToolTipGenerator(tooltipGenerator);
    return plot;
}