List of usage examples for org.jfree.chart.renderer.xy XYBarRenderer setSeriesItemLabelsVisible
public void setSeriesItemLabelsVisible(int series, boolean visible)
From source file:org.fhcrc.cpl.viewer.gui.SpectrumChartFactory.java
protected static XYPlot createXYPlot(XYDataset dataset, Color[] colors) { // break up into two datasets, one for bars one for lines //LinkedList lines =new LinkedList(); //LinkedList bars = new LinkedList(); XYDataset seriesLines = new XYSeriesCollection(); XYDataset seriesBars = new XYSeriesCollection(); ((XYSeriesCollection) seriesBars).setIntervalWidth(0.0); if (dataset instanceof XYSeriesCollection) { while (0 < dataset.getSeriesCount()) { XYSeries s = ((XYSeriesCollection) dataset).getSeries(0); ((XYSeriesCollection) dataset).removeSeries(0); Comparable key = s.getKey(); boolean lines = false; if (key instanceof String) lines = ((String) key).startsWith("-"); if (lines) ((XYSeriesCollection) seriesLines).addSeries(s); else// ww w.j a v a 2s.com ((XYSeriesCollection) seriesBars).addSeries(s); } } else { seriesBars = dataset; } NumberAxis axisDomain = new NumberAxis(); axisDomain.setAutoRange(true); axisDomain.setAutoRangeIncludesZero(false); // axisDomain.setRange(400.0, 1600.0); // NOTE: zooming in too far kills the chart, prevent this axisDomain.addChangeListener(new AxisChangeListener() { public void axisChanged(AxisChangeEvent event) { NumberAxis axis = (NumberAxis) event.getSource(); Range range = axis.getRange(); if (range.getLength() < 2.0) { //_log.info("AxisChangeListener " + range.getLength() + " " + range.toString()); double middle = range.getLowerBound() + range.getLength() / 2.0; axis.setRange(new Range(middle - 1.1, middle + 1.1)); } } }); NumberAxis axisRange = new NumberAxis(); axisRange.setAutoRange(true); axisRange.setAutoRangeIncludesZero(true); XYToolTipGenerator toolTipGenerator = new XYToolTipGenerator() { public String generateToolTip(XYDataset xyDataset, int s, int i) { double X = Math.round(xyDataset.getXValue(s, i) * 1000.0) / 1000.0; double Y = Math.round(xyDataset.getYValue(s, i) * 1000.0) / 1000.0; return "(" + X + ", " + Y + ")"; } }; XYBarRenderer barRenderer = new XYBarRenderer(); //dhmay adding 2009/09/14. As of jfree 1.0.13, shadows on by default barRenderer.setShadowVisible(false); //dhmay adding for jfreechart 1.0.6 upgrade. If this isn't here, we get a //nullPointerException in XYBarRenderer.drawItemLabel barRenderer.setBaseItemLabelGenerator(new NullLabelGenerator()); barRenderer.setSeriesItemLabelsVisible(0, true); barRenderer.setBaseToolTipGenerator(toolTipGenerator); XYLineAndShapeRenderer lineRenderer = new XYLineAndShapeRenderer(); lineRenderer.setBaseToolTipGenerator(toolTipGenerator); XYPlot xy = new XYPlot(null, axisDomain, axisRange, null); int ds = 0; if (seriesLines.getSeriesCount() > 0) { xy.setDataset(ds, seriesLines); xy.setRenderer(ds, lineRenderer); xy.mapDatasetToRangeAxis(ds, 0); ds++; for (int i = 0; i < seriesLines.getSeriesCount(); i++) { Comparable key = ((XYSeriesCollection) seriesLines).getSeriesKey(i); boolean lines = false; if (key instanceof String) lines = ((String) key).startsWith("-"); lineRenderer.setSeriesLinesVisible(i, lines); lineRenderer.setSeriesShapesVisible(i, !lines); } } if (seriesBars.getSeriesCount() > 0) { xy.setDataset(ds, seriesBars); xy.setRenderer(ds, barRenderer); xy.mapDatasetToRangeAxis(ds, 0); ds++; } setColors(xy, colors); return xy; }
From source file:org.systemsbiology.mzxmlviewer.utilities.SpectrumComponent.java
public void setScan(Scan s) { if (chart == null) { data = new MyDataSet(s.getMassIntensityList()); chart = ChartFactory.createXYBarChart("Spectrum @ " + s.getRetentionTime() + " s", "m/z", false, "intensity", data, PlotOrientation.VERTICAL, false, false, false); //chart.getXYPlot().setDomainAxis(new NumberAxis()); //chart.getXYPlot().setRangeAxis(new NumberAxis()); XYBarRenderer renderer = new XYBarRenderer(); renderer.setSeriesItemLabelsVisible(0, new Boolean(true)); chart.getXYPlot().setRenderer(renderer); removeAll();/* w w w. j a v a 2 s . co m*/ add(new ChartPanel(chart)); validate(); repaint(); } NumberFormat format = NumberFormat.getNumberInstance(); format.setMaximumFractionDigits(1); chart.setTitle("Spectrum @ " + format.format(s.getDoubleRetentionTime()) + " s"); chart.getXYPlot().clearDomainMarkers(); if (s.getMsLevel() == 2) chart.getXYPlot().addDomainMarker(new ValueMarker(s.getPrecursorMz())); data.setData(s.getMassIntensityList()); }
From source file:it.cnr.istc.iloc.gui.StateVariableVisualizer.java
@Override public Collection<XYPlot> getPlots(Type type) { Collection<IItem> instances = type.getInstances(); Collection<XYPlot> plots = new ArrayList<>(instances.size()); Map<IItem, Collection<Atom>> sv_atoms = new IdentityHashMap<>(instances.size()); for (IItem i : type.getInstances()) { sv_atoms.put(i, new ArrayList<>()); }//from www . j ava2 s. co m for (Atom atom : ((StateVariable) type).getDefinedPredicates().stream() .flatMap(p -> p.getInstances().stream()).map(a -> (Atom) a) .filter(a -> a.state.evaluate().isSingleton() && a.state.evaluate().contains(AtomState.Active)) .collect(Collectors.toList())) { for (IItem i : ((IEnumItem) atom.get(SCOPE)).getEnumVar().evaluate().getAllowedValues()) { if (sv_atoms.containsKey(i)) { sv_atoms.get(i).add(atom); } } } for (IItem sv : instances) { Collection<Atom> atoms = sv_atoms.get(sv); // For each pulse the atoms starting at that pulse Map<Double, Collection<Atom>> starting_atoms = new HashMap<>(atoms.size()); // For each pulse the atoms ending at that pulse Map<Double, Collection<Atom>> ending_atoms = new HashMap<>(atoms.size()); // The pulses of the timeline Set<Double> c_pulses = new HashSet<>(atoms.size() * 2); for (Atom atom : atoms) { double start = sv.getCore().evaluate(((IArithItem) atom.get("start")).getArithVar()); double end = sv.getCore().evaluate(((IArithItem) atom.get("end")).getArithVar()); if (!starting_atoms.containsKey(start)) { starting_atoms.put(start, new ArrayList<>()); } starting_atoms.get(start).add(atom); if (!ending_atoms.containsKey(end)) { ending_atoms.put(end, new ArrayList<>()); } ending_atoms.get(end).add(atom); c_pulses.add(start); c_pulses.add(end); } // we sort current pulses.. Double[] c_pulses_array = c_pulses.toArray(new Double[c_pulses.size()]); Arrays.sort(c_pulses_array); XYIntervalSeriesCollection collection = new XYIntervalSeriesCollection(); ValueXYIntervalSeries undefined = new ValueXYIntervalSeries("Undefined"); ValueXYIntervalSeries sv_values = new ValueXYIntervalSeries("Values"); ValueXYIntervalSeries conflicts = new ValueXYIntervalSeries("Conflicts"); List<Atom> overlapping_atoms = new ArrayList<>(); for (int i = 0; i < c_pulses_array.length - 1; i++) { if (starting_atoms.containsKey(c_pulses_array[i])) { overlapping_atoms.addAll(starting_atoms.get(c_pulses_array[i])); } if (ending_atoms.containsKey(c_pulses_array[i])) { overlapping_atoms.removeAll(ending_atoms.get(c_pulses_array[i])); } switch (overlapping_atoms.size()) { case 0: undefined.add(c_pulses_array[i], c_pulses_array[i], c_pulses_array[i + 1], 0, 0, 1, new Atom[0]); break; case 1: sv_values.add(c_pulses_array[i], c_pulses_array[i], c_pulses_array[i + 1], 0, 0, 1, overlapping_atoms.toArray(new Atom[overlapping_atoms.size()])); break; default: conflicts.add(c_pulses_array[i], c_pulses_array[i], c_pulses_array[i + 1], 0, 0, 1, overlapping_atoms.toArray(new Atom[overlapping_atoms.size()])); break; } } collection.addSeries(undefined); collection.addSeries(sv_values); collection.addSeries(conflicts); XYBarRenderer renderer = new XYBarRenderer(); renderer.setSeriesPaint(0, Color.lightGray); renderer.setSeriesPaint(1, new Color(100, 250, 100)); renderer.setSeriesPaint(2, Color.pink); renderer.setBarPainter(new ReverseGradientXYBarPainter()); renderer.setDrawBarOutline(true); renderer.setShadowXOffset(2); renderer.setShadowYOffset(2); renderer.setUseYInterval(true); renderer.setBaseItemLabelsVisible(true); renderer.setBaseItemLabelPaint(Color.black); Font font = new Font("SansSerif", Font.PLAIN, 9); renderer.setBaseItemLabelFont(font); XYItemLabelGenerator generator = (XYDataset dataset, int series, int item) -> toString(((ValueXYIntervalDataItem) ((XYIntervalSeriesCollection) dataset) .getSeries(series).getDataItem(item)).atoms); ItemLabelPosition itLabPos = new ItemLabelPosition(ItemLabelAnchor.CENTER, TextAnchor.CENTER); renderer.setBasePositiveItemLabelPosition(itLabPos); for (int i = 0; i < collection.getSeriesCount(); i++) { renderer.setSeriesItemLabelGenerator(i, generator); renderer.setSeriesItemLabelsVisible(i, true); renderer.setSeriesItemLabelPaint(i, Color.black); renderer.setSeriesItemLabelFont(i, font); renderer.setSeriesPositiveItemLabelPosition(i, itLabPos); renderer.setSeriesToolTipGenerator(i, (XYDataset dataset, int series, int item) -> toString( ((ValueXYIntervalDataItem) ((XYIntervalSeriesCollection) dataset).getSeries(series) .getDataItem(item)).atoms)); } XYPlot plot = new XYPlot(collection, null, new NumberAxis(""), renderer); plot.getRangeAxis().setVisible(false); plot.setDatasetRenderingOrder(DatasetRenderingOrder.FORWARD); plots.add(plot); } return plots; }