Example usage for org.jfree.util ShapeUtilities createDiamond

List of usage examples for org.jfree.util ShapeUtilities createDiamond

Introduction

In this page you can find the example usage for org.jfree.util ShapeUtilities createDiamond.

Prototype

public static Shape createDiamond(final float s) 

Source Link

Document

Creates a diamond shape.

Usage

From source file:eremeykin.pete.plotter.PolarPlotterTopComponent.java

JFreeChart createChart(XYDataset dataset) {
    final JFreeChart chart = ChartFactory.createPolarChart(" ?", dataset,
            true, true, false);// w w w .j a  v  a2  s. co  m
    chart.setBackgroundPaint(Color.white);
    plot = (PolarPlot) chart.getPlot();
    plot.setBackgroundPaint(Color.WHITE);
    plot.setAngleGridlinePaint(Color.BLACK);
    plot.setRadiusGridlinePaint(Color.LIGHT_GRAY);
    final DefaultPolarItemRenderer renderer = new DefaultPolarItemRenderer();
    renderer.setSeriesShape(1, ShapeUtilities.createDiamond(1));
    renderer.setSeriesShape(2, ShapeUtilities.createDiamond(1));
    renderer.setSeriesShape(3, ShapeUtilities.createDiamond(1));
    renderer.setSeriesPaint(0, Color.RED);
    renderer.setSeriesPaint(1, Color.BLUE);
    renderer.setSeriesPaint(2, Color.BLUE);
    renderer.setSeriesPaint(3, Color.BLACK);
    plot.setRenderer(renderer);
    chart.setTitle(new org.jfree.chart.title.TextTitle(" ?",
            new java.awt.Font("Arial", java.awt.Font.PLAIN, 16)));
    return chart;
}

From source file:com.vgi.mafscaling.Rescale.java

private void createGraghPanel(JPanel dataPanel) {
    JFreeChart chart = ChartFactory.createScatterPlot(null, null, null, null, PlotOrientation.VERTICAL, false,
            true, false);/* www .j a v a 2 s.c o m*/
    chart.setBorderVisible(true);
    mafChartPanel = new MafChartPanel(chart, this);

    GridBagConstraints gbl_chartPanel = new GridBagConstraints();
    gbl_chartPanel.anchor = GridBagConstraints.PAGE_START;
    gbl_chartPanel.insets = insets0;
    gbl_chartPanel.fill = GridBagConstraints.BOTH;
    gbl_chartPanel.weightx = 1.0;
    gbl_chartPanel.weighty = 1.0;
    gbl_chartPanel.gridx = 0;
    gbl_chartPanel.gridy = 2;
    dataPanel.add(mafChartPanel.getChartPanel(), gbl_chartPanel);

    XYSplineRenderer lineRenderer = new XYSplineRenderer(3);
    lineRenderer.setUseFillPaint(true);
    lineRenderer.setBaseToolTipGenerator(
            new StandardXYToolTipGenerator(StandardXYToolTipGenerator.DEFAULT_TOOL_TIP_FORMAT,
                    new DecimalFormat("0.00"), new DecimalFormat("0.00")));

    Stroke stroke = new BasicStroke(2.0f, BasicStroke.CAP_ROUND, BasicStroke.JOIN_ROUND, 1.0f, null, 0.0f);
    lineRenderer.setSeriesStroke(0, stroke);
    lineRenderer.setSeriesStroke(1, stroke);
    lineRenderer.setSeriesPaint(0, new Color(201, 0, 0));
    lineRenderer.setSeriesPaint(1, new Color(0, 0, 255));
    lineRenderer.setSeriesShape(0, ShapeUtilities.createDiamond((float) 2.5));
    lineRenderer.setSeriesShape(1, ShapeUtilities.createUpTriangle((float) 2.5));

    ValueAxis mafvDomain = new NumberAxis(XAxisName);
    ValueAxis mafgsRange = new NumberAxis(YAxisName);

    XYSeriesCollection lineDataset = new XYSeriesCollection();

    lineDataset.addSeries(currMafData);
    lineDataset.addSeries(corrMafData);

    XYPlot plot = chart.getXYPlot();
    plot.setRangePannable(true);
    plot.setDomainPannable(true);
    plot.setDomainGridlinePaint(Color.DARK_GRAY);
    plot.setRangeGridlinePaint(Color.DARK_GRAY);
    plot.setBackgroundPaint(new Color(224, 224, 224));
    plot.setSeriesRenderingOrder(SeriesRenderingOrder.FORWARD);

    plot.setDataset(0, lineDataset);
    plot.setRenderer(0, lineRenderer);
    plot.setDomainAxis(0, mafvDomain);
    plot.setRangeAxis(0, mafgsRange);
    plot.mapDatasetToDomainAxis(0, 0);
    plot.mapDatasetToRangeAxis(0, 0);

    LegendTitle legend = new LegendTitle(plot.getRenderer());
    legend.setItemFont(new Font("Arial", 0, 10));
    legend.setPosition(RectangleEdge.TOP);
    chart.addLegend(legend);
}

From source file:ca.nengo.plot.impl.DefaultPlotter.java

private static void configSpikeRenderer(XYLineAndShapeRenderer renderer) {
    renderer.setShape(ShapeUtilities.createDiamond(1f));
    renderer.setShapesVisible(true);// w  w  w. j  a  v a  2 s .  co  m
    renderer.setShapesFilled(true);
    renderer.setLinesVisible(false);
    renderer.setPaint(Color.BLACK);
}

From source file:mil.tatrc.physiology.utilities.csv.plots.ActionEventPlotter.java

public void createGraph(PlotJob job, List<List<Double>> timeData, List<List<Double>> data,
        List<LogEvent> events, List<SEAction> actions) {
    CSVPlotTool plotTool = new CSVPlotTool(); //to leverage existing functions
    String title = job.name + "_";
    XYSeriesCollection dataSet = new XYSeriesCollection();
    double maxY = 0;
    double minY = Double.MAX_VALUE;
    for (int i = 0; i < timeData.size(); i++) {
        if (timeData.get(i) == null || data.get(i) == null) {
            job.bgColor = Color.white; //This hits when we have Expected data but NOT computed data
            continue;
        }//from   ww w  .  j  a  v  a  2s  .c  o m

        title = title + job.headers.get(i) + "_";
        XYSeries dataSeries;
        if (job.isComparePlot) {
            if (timeData.size() > 1)
                dataSeries = plotTool.createXYSeries(i == 0 ? "Expected" : "Computed", timeData.get(i),
                        data.get(i));
            else //If we're comparing but only have one data list, expected is missing, so rename to computed
            {
                dataSeries = plotTool.createXYSeries("Computed", timeData.get(i), data.get(i));
            }
        } else
            dataSeries = plotTool.createXYSeries(job.headers.get(i), timeData.get(i), data.get(i));
        dataSet.addSeries(dataSeries);
        maxY = maxY < dataSeries.getMaxY() ? dataSeries.getMaxY() : maxY;
        minY = minY > dataSeries.getMinY() ? dataSeries.getMinY() : minY;
    }
    title = title + "vs_Time_Action_Event_Plot";

    //Override the constructed title if desired (usually for compare plots)
    if (job.titleOverride != null && !job.titleOverride.isEmpty()
            && !job.titleOverride.equalsIgnoreCase("None"))
        title = job.titleOverride;

    double rangeLength = maxY - minY;
    if (Math.abs(rangeLength) < 1e-6) {
        rangeLength = .01;
    }

    class AEEntry implements Comparable<AEEntry> {
        public String name;
        public List<Double> times = new ArrayList<Double>();
        public List<Double> YVals = new ArrayList<Double>();
        public String type = "";

        public int compareTo(AEEntry entry) {
            return times.get(0) < entry.times.get(0) ? -1 : times.get(0) > entry.times.get(0) ? 1 : 0;
        }
    }

    List<AEEntry> allActionsAndEvents = new ArrayList<AEEntry>();

    if (!job.skipAllEvents) {
        //Make points for each event
        //Treat each event like two points on the same vertical line
        for (LogEvent event : events) {
            boolean skip = false;

            for (String eventToSkip : job.eventOmissions) {
                if (event.text.contains(eventToSkip))
                    skip = true;
            }
            if (skip)
                continue;
            AEEntry entry = new AEEntry();

            entry.times.add(event.time.getValue());
            if (job.logAxis)
                entry.YVals.add(maxY);
            else if (job.forceZeroYAxisBound && maxY < 0)
                entry.YVals.add(-.01);
            else
                entry.YVals.add(maxY + 0.15 * rangeLength);

            entry.times.add(event.time.getValue());
            if (job.logAxis)
                entry.YVals.add(minY);
            else if (job.forceZeroYAxisBound && minY > 0)
                entry.YVals.add(-.01);
            else
                entry.YVals.add(minY - 0.15 * rangeLength);

            entry.name = event.text + "\r\nt=" + event.time.getValue();
            entry.type = "EVENT:";

            allActionsAndEvents.add(entry);
        }
    }

    if (!job.skipAllActions) {
        //Make similar entries for actions
        for (SEAction action : actions) {
            boolean skip = false;

            for (String actionToSkip : job.actionOmissions) {
                if (action.toString().contains(actionToSkip))
                    skip = true;
            }
            if (skip)
                continue;

            if (action.toString().contains("Advance Time"))
                continue;

            AEEntry entry = new AEEntry();

            entry.times.add(action.getScenarioTime().getValue());
            if (job.logAxis)
                entry.YVals.add(maxY);
            else if (job.forceZeroYAxisBound && maxY < 0)
                entry.YVals.add(-.01);
            else
                entry.YVals.add(maxY + 0.15 * rangeLength);

            entry.times.add(action.getScenarioTime().getValue());
            if (job.logAxis)
                entry.YVals.add(minY);
            else if (job.forceZeroYAxisBound && minY > 0)
                entry.YVals.add(-.01);
            else
                entry.YVals.add(minY - 0.15 * rangeLength);

            entry.name = action.toString() + "\r\nt=" + action.getScenarioTime().getValue();
            entry.type = "ACTION:";

            allActionsAndEvents.add(entry);
        }
    }

    //Sort the list
    Collections.sort(allActionsAndEvents);

    //Add a series for each entry
    for (AEEntry entry : allActionsAndEvents) {
        dataSet.addSeries(plotTool.createXYSeries(entry.type + entry.name, entry.times, entry.YVals));
    }

    //If we have experimental data, try to load it and create a dataset for it
    XYSeriesCollection expDataSet = new XYSeriesCollection();
    if (job.experimentalData != null && !job.experimentalData.isEmpty()) {
        Map<String, List<Double>> expData = new HashMap<String, List<Double>>();
        List<String> expHeaders = new ArrayList<String>();

        try {
            CSVContents csv = new CSVContents(job.experimentalData);
            csv.abbreviateContents = 0;
            csv.readAll(expData);
            expHeaders = csv.getHeaders();
        } catch (Exception e) {
            Log.error("Unable to read experimental data");
        }

        if (!expData.isEmpty() && !expHeaders.isEmpty()) {
            List<Double> expTimeData = new ArrayList<Double>();
            expTimeData = expData.get("Time(s)");

            for (String h : expHeaders) //Will assume all headers from exp file will be on same Y axis vs time
            {
                if (h.equalsIgnoreCase("Time(s)"))
                    continue;

                expDataSet.addSeries(plotTool.createXYSeries("Experimental " + h, expTimeData, expData.get(h)));
            }
        }
    }

    //set labels
    String XAxisLabel = "Time(s)";
    String YAxisLabel = job.headers.get(0);

    JFreeChart chart = ChartFactory.createXYLineChart(
            job.titleOverride != null && job.titleOverride.equalsIgnoreCase("None") ? "" : title, // chart title
            XAxisLabel, // x axis label
            YAxisLabel, // y axis label
            dataSet, // data
            PlotOrientation.VERTICAL, // orientation
            true, // include legend
            true, // tooltips
            false // urls
    );

    Log.info("Creating Graph " + title);
    XYPlot plot = (XYPlot) chart.getPlot();

    if (!job.logAxis) {
        // Determine Y range
        double resMax0 = maxY;
        double resMin0 = minY;
        if (Double.isNaN(resMax0) || Double.isNaN(resMin0))
            plot.getDomainAxis().setLabel("Range is NaN");
        if (DoubleUtils.isZero(resMin0))
            resMin0 = -0.000001;
        if (DoubleUtils.isZero(resMax0))
            resMax0 = 0.000001;
        if (job.forceZeroYAxisBound && resMin0 >= 0)
            resMin0 = -.000001;
        if (job.forceZeroYAxisBound && resMax0 <= 0)
            resMax0 = .000001;
        rangeLength = resMax0 - resMin0;
        ValueAxis yAxis = plot.getRangeAxis();
        if (rangeLength != 0)
            yAxis.setRange(resMin0 - 0.15 * rangeLength, resMax0 + 0.15 * rangeLength);//15% buffer so we can see top and bottom clearly           

        //Add another Y axis to the right side for easier reading
        ValueAxis rightYAxis = new NumberAxis();
        rightYAxis.setRange(yAxis.getRange());
        rightYAxis.setLabel("");

        //Override the bounds if desired
        try {
            if (job.Y1LowerBound != null) {
                yAxis.setLowerBound(job.Y1LowerBound);
                rightYAxis.setLowerBound(job.Y1LowerBound);
            }
            if (job.Y1UpperBound != null) {
                yAxis.setUpperBound(job.Y1UpperBound);
                rightYAxis.setUpperBound(job.Y1UpperBound);
            }
        } catch (Exception e) {
            Log.error(
                    "Couldn't set Y bounds. You probably tried to set a bound on an axis that doesn't exist.");
        }
        plot.setRangeAxis(0, yAxis);
        plot.setRangeAxis(1, rightYAxis);

    } else {
        double resMin = minY;
        double resMax = maxY;
        if (resMin <= 0.0)
            resMin = .00001;
        LogarithmicAxis yAxis = new LogarithmicAxis("Log(" + YAxisLabel + ")");
        LogarithmicAxis rightYAxis = new LogarithmicAxis("");
        yAxis.setLowerBound(resMin);
        rightYAxis.setLowerBound(resMin);
        yAxis.setUpperBound(resMax);
        rightYAxis.setUpperBound(resMax);

        //Override the bounds if desired
        try {
            if (job.Y1LowerBound != null) {
                yAxis.setLowerBound(job.Y1LowerBound);
                rightYAxis.setLowerBound(job.Y1LowerBound);
            }
            if (job.Y1UpperBound != null) {
                yAxis.setUpperBound(job.Y1UpperBound);
                rightYAxis.setUpperBound(job.Y1UpperBound);
            }
        } catch (Exception e) {
            Log.error(
                    "Couldn't set Y bounds. You probably tried to set a bound on an axis that doesn't exist.");
        }
        plot.setRangeAxis(0, yAxis);
        plot.setRangeAxis(1, rightYAxis);
    }

    //Override X bounds if desired
    try {
        if (job.X1LowerBound != null)
            plot.getDomainAxis(0).setLowerBound(job.X1LowerBound);
        if (job.X1UpperBound != null)
            plot.getDomainAxis(0).setUpperBound(job.X1UpperBound);
    } catch (Exception e) {
        Log.error("Couldn't set X bounds. You probably tried to set a bound on an axis that doesn't exist.");
    }

    //Override labels if desired
    if (job.X1Label != null && !plot.getDomainAxis(0).getLabel().contains("NaN"))
        plot.getDomainAxis(0).setLabel(job.X1Label.equalsIgnoreCase("None") ? "" : job.X1Label);
    if (job.Y1Label != null)
        plot.getRangeAxis(0).setLabel(job.Y1Label.equalsIgnoreCase("None") ? "" : job.Y1Label);

    //If we have experimental data, set up the renderer for it and add to plot
    if (expDataSet.getSeriesCount() != 0) {
        XYItemRenderer renderer1 = new XYLineAndShapeRenderer(false, true); // Shapes only
        renderer1.setSeriesShape(0, ShapeUtilities.createDiamond(8));
        plot.setDataset(1, expDataSet);
        plot.setRenderer(1, renderer1);
        plot.mapDatasetToDomainAxis(1, 0);
        plot.mapDatasetToRangeAxis(1, 0);
    }

    formatAEPlot(job, chart);
    plot.setDomainGridlinesVisible(job.showGridLines);
    plot.setRangeGridlinesVisible(job.showGridLines);

    //Changing line widths and colors
    XYItemRenderer r = plot.getRenderer();
    BasicStroke wideLine = new BasicStroke(2.0f);
    Color[] AEcolors = { Color.red, Color.green, Color.black, Color.magenta, Color.orange };
    Color[] dataColors = { Color.blue, Color.cyan, Color.gray, Color.black, Color.red };
    for (int i = 0, cIndex = 0; i < dataSet.getSeriesCount(); i++, cIndex++) {
        r.setSeriesStroke(i, wideLine);
        XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) plot.getRenderer();
        renderer.setBaseShapesVisible(false);
        if (cIndex > 4)
            cIndex = 0;
        if (i < job.headers.size()) //Our actual data
        {
            renderer.setSeriesFillPaint(i, dataColors[cIndex]);
            renderer.setSeriesPaint(i, dataColors[cIndex]);
        } else //actions and events in procession of other colors
        {
            renderer.setSeriesFillPaint(i, AEcolors[cIndex]);
            renderer.setSeriesPaint(i, AEcolors[cIndex]);
        }
    }
    //Special color and format changes for compare plots
    if (job.isComparePlot) {
        XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) plot.getRenderer();

        for (int i = 0; i < dataSet.getSeriesCount(); i++) {
            if (dataSet.getSeries(i).getKey().toString().equalsIgnoreCase("Expected")) {
                renderer.setSeriesStroke(//makes a dashed line
                        i, //argument below float[]{I,K} -> alternates between solid and opaque (solid for I, opaque for K)
                        new BasicStroke(2.0f, BasicStroke.CAP_ROUND, BasicStroke.JOIN_ROUND, 1.0f,
                                new float[] { 15.0f, 30.0f }, 0.0f));
                renderer.setDrawSeriesLineAsPath(true);
                renderer.setUseFillPaint(true);
                renderer.setBaseShapesVisible(false);
                renderer.setSeriesFillPaint(i, Color.black);
                renderer.setSeriesPaint(i, Color.black);
            }
            if (dataSet.getSeries(i).getKey().toString().equalsIgnoreCase("Computed")) {
                renderer.setSeriesFillPaint(i, Color.red);
                renderer.setSeriesPaint(i, Color.red);
            }
            if (dataSet.getSeries(i).getKey().toString().startsWith("ACTION")) {
                renderer.setSeriesFillPaint(i, Color.green);
                renderer.setSeriesPaint(i, Color.green);
            }
            if (dataSet.getSeries(i).getKey().toString().startsWith("EVENT")) {
                renderer.setSeriesFillPaint(i, Color.blue);
                renderer.setSeriesPaint(i, Color.blue);
            }
        }
    }

    //Split the auto-generated legend into two legends, one for data and one for actions and events
    LegendItemCollection originalLegendCollection = plot.getLegendItems();
    final LegendItemCollection dataLegendCollection = new LegendItemCollection();
    int i;
    for (i = 0; i < job.headers.size() && i < originalLegendCollection.getItemCount(); i++) {
        if (originalLegendCollection.get(i).getLabel().startsWith("ACTION")
                || originalLegendCollection.get(i).getLabel().startsWith("EVENT"))
            break;
        dataLegendCollection.add(originalLegendCollection.get(i));
    }
    final LegendItemCollection remainingLegendCollection = new LegendItemCollection();
    for (; i < originalLegendCollection.getItemCount(); i++) {
        remainingLegendCollection.add(originalLegendCollection.get(i));
    }
    chart.removeLegend();
    LegendItemSource source = new LegendItemSource() {
        LegendItemCollection lic = new LegendItemCollection();
        {
            lic.addAll(dataLegendCollection);
        }

        public LegendItemCollection getLegendItems() {
            return lic;
        }
    };
    LegendTitle dataLegend = new LegendTitle(source);
    dataLegend.setMargin(new RectangleInsets(1.0, 1.0, 1.0, 1.0));
    dataLegend.setBorder(2, 2, 2, 2);
    dataLegend.setBackgroundPaint(Color.white);
    dataLegend.setPosition(RectangleEdge.TOP);
    dataLegend.setItemFont(new Font("SansSerif", Font.PLAIN, 22));
    chart.addLegend(dataLegend);

    source = new LegendItemSource() {
        LegendItemCollection lic = new LegendItemCollection();
        {
            lic.addAll(remainingLegendCollection);
        }

        public LegendItemCollection getLegendItems() {
            return lic;
        }
    };
    LegendTitle actionEventsLegend = new LegendTitle(source);
    actionEventsLegend.setMargin(new RectangleInsets(1.0, 1.0, 1.0, 1.0));
    actionEventsLegend.setBorder(2, 2, 2, 2);
    actionEventsLegend.setBackgroundPaint(Color.white);
    actionEventsLegend.setPosition(RectangleEdge.BOTTOM);
    actionEventsLegend.setItemFont(new Font("SansSerif", Font.PLAIN, 22));
    if (!job.hideAELegend && !job.removeAllLegends)
        chart.addLegend(actionEventsLegend);

    if (job.removeAllLegends)
        chart.removeLegend();

    int verticalPixels = 800 + 170 * (allActionsAndEvents.size() / 5);

    //This is a little hacky, but if we want only the legend, just extend Plot() and remove the draw functionality so it makes a blank plot
    class legendPlot extends Plot {
        public void draw(Graphics2D arg0, Rectangle2D arg1, Point2D arg2, PlotState arg3,
                PlotRenderingInfo arg4) {

        }

        public String getPlotType() {
            return null;
        }
    }
    //Then add the legend to that and throw away the original plot
    if (job.legendOnly) {
        chart = new JFreeChart("", null, new legendPlot(), false);
        chart.addLegend(actionEventsLegend);
    }

    try {
        FileUtils.createDirectory(job.outputDir);
        String filename = job.outputFilename == null
                ? job.outputDir + "/" + plotTool.MakeFileName(title) + ".jpg"
                : job.outputDir + "/" + job.outputFilename;
        if (!filename.endsWith(".jpg"))
            filename = filename + ".jpg";
        File JPGFile = new File(filename);
        if (job.imageHeight != null && job.imageWidth != null)
            ChartUtilities.saveChartAsJPEG(JPGFile, chart, job.imageWidth, job.imageHeight);
        else if (!job.hideAELegend && !job.removeAllLegends)
            ChartUtilities.saveChartAsJPEG(JPGFile, chart, 1600, verticalPixels);
        else
            ChartUtilities.saveChartAsJPEG(JPGFile, chart, 1600, 800);
    } catch (IOException e) {
        Log.error(e.getMessage());
    }
}

From source file:com.vgi.mafscaling.MafCompare.java

/**
 * Initialize the contents of the frame.
 *///from  w  ww.j  a  v a  2 s. co  m
private void initialize() {
    try {
        ImageIcon tableImage = new ImageIcon(getClass().getResource("/table.jpg"));
        setTitle(Title);
        setIconImage(tableImage.getImage());
        setBounds(100, 100, 621, 372);
        setDefaultCloseOperation(JFrame.HIDE_ON_CLOSE);
        setSize(Config.getCompWindowSize());
        setLocation(Config.getCompWindowLocation());
        setLocationRelativeTo(null);
        setVisible(false);
        addWindowListener(new WindowAdapter() {
            public void windowClosing(WindowEvent e) {
                Utils.clearTable(origMafTable);
                Utils.clearTable(newMafTable);
                Utils.clearTable(compMafTable);
                Config.setCompWindowSize(getSize());
                Config.setCompWindowLocation(getLocation());
                origMafData.clear();
                newMafData.clear();
            }
        });

        JPanel dataPanel = new JPanel();
        GridBagLayout gbl_dataPanel = new GridBagLayout();
        gbl_dataPanel.columnWidths = new int[] { 0, 0, 0 };
        gbl_dataPanel.rowHeights = new int[] { RowHeight, RowHeight, RowHeight, RowHeight, RowHeight, 0 };
        gbl_dataPanel.columnWeights = new double[] { 0.0, 0.0, 0.0 };
        gbl_dataPanel.rowWeights = new double[] { 0.0, 0.0, 0.0, 0.0, 0.0, 1.0 };
        dataPanel.setLayout(gbl_dataPanel);
        getContentPane().add(dataPanel);

        JLabel origLabel = new JLabel(origMaf);
        GridBagConstraints gbc_origLabel = new GridBagConstraints();
        gbc_origLabel.anchor = GridBagConstraints.PAGE_START;
        gbc_origLabel.insets = new Insets(1, 1, 1, 5);
        gbc_origLabel.weightx = 0;
        gbc_origLabel.weighty = 0;
        gbc_origLabel.gridx = 0;
        gbc_origLabel.gridy = 0;
        gbc_origLabel.gridheight = 2;
        dataPanel.add(origLabel, gbc_origLabel);

        JLabel newLabel = new JLabel(newMaf);
        GridBagConstraints gbc_newLabel = new GridBagConstraints();
        gbc_newLabel.anchor = GridBagConstraints.PAGE_START;
        gbc_newLabel.insets = new Insets(1, 1, 1, 5);
        gbc_newLabel.weightx = 0;
        gbc_newLabel.weighty = 0;
        gbc_newLabel.gridx = 0;
        gbc_newLabel.gridy = 2;
        gbc_newLabel.gridheight = 2;
        dataPanel.add(newLabel, gbc_newLabel);

        JLabel compLabel = new JLabel("Change");
        GridBagConstraints gbc_compLabel = new GridBagConstraints();
        gbc_compLabel.anchor = GridBagConstraints.PAGE_START;
        gbc_compLabel.insets = new Insets(1, 1, 1, 5);
        gbc_compLabel.weightx = 0;
        gbc_compLabel.weighty = 0;
        gbc_compLabel.gridx = 0;
        gbc_compLabel.gridy = 4;
        dataPanel.add(compLabel, gbc_compLabel);

        JLabel origVoltLabel = new JLabel("volt");
        GridBagConstraints gbc_origVoltLabel = new GridBagConstraints();
        gbc_origVoltLabel.anchor = GridBagConstraints.PAGE_START;
        gbc_origVoltLabel.insets = new Insets(1, 1, 1, 5);
        gbc_origVoltLabel.weightx = 0;
        gbc_origVoltLabel.weighty = 0;
        gbc_origVoltLabel.gridx = 1;
        gbc_origVoltLabel.gridy = 0;
        dataPanel.add(origVoltLabel, gbc_origVoltLabel);

        JLabel origGsLabel = new JLabel(" g/s");
        GridBagConstraints gbc_origGsLabel = new GridBagConstraints();
        gbc_origGsLabel.anchor = GridBagConstraints.PAGE_START;
        gbc_origGsLabel.insets = new Insets(1, 1, 1, 5);
        gbc_origGsLabel.weightx = 0;
        gbc_origGsLabel.weighty = 0;
        gbc_origGsLabel.gridx = 1;
        gbc_origGsLabel.gridy = 1;
        dataPanel.add(origGsLabel, gbc_origGsLabel);

        JLabel newVoltLabel = new JLabel("volt");
        GridBagConstraints gbc_newVoltLabel = new GridBagConstraints();
        gbc_newVoltLabel.anchor = GridBagConstraints.PAGE_START;
        gbc_newVoltLabel.insets = new Insets(1, 1, 1, 5);
        gbc_newVoltLabel.weightx = 0;
        gbc_newVoltLabel.weighty = 0;
        gbc_newVoltLabel.gridx = 1;
        gbc_newVoltLabel.gridy = 2;
        dataPanel.add(newVoltLabel, gbc_newVoltLabel);

        JLabel newGsLabel = new JLabel(" g/s");
        GridBagConstraints gbc_newGsLabel = new GridBagConstraints();
        gbc_newGsLabel.anchor = GridBagConstraints.PAGE_START;
        gbc_newGsLabel.insets = new Insets(1, 1, 1, 5);
        gbc_newGsLabel.weightx = 0;
        gbc_newGsLabel.weighty = 0;
        gbc_newGsLabel.gridx = 1;
        gbc_newGsLabel.gridy = 3;
        dataPanel.add(newGsLabel, gbc_newGsLabel);

        JLabel compPctLabel = new JLabel(" %  ");
        GridBagConstraints gbc_compPctLabel = new GridBagConstraints();
        gbc_compPctLabel.anchor = GridBagConstraints.PAGE_START;
        gbc_compPctLabel.insets = new Insets(1, 1, 1, 5);
        gbc_compPctLabel.weightx = 0;
        gbc_compPctLabel.weighty = 0;
        gbc_compPctLabel.gridx = 1;
        gbc_compPctLabel.gridy = 4;
        dataPanel.add(compPctLabel, gbc_compPctLabel);

        JPanel tablesPanel = new JPanel();
        GridBagLayout gbl_tablesPanel = new GridBagLayout();
        gbl_tablesPanel.columnWidths = new int[] { 0 };
        gbl_tablesPanel.rowHeights = new int[] { 0, 0, 0 };
        gbl_tablesPanel.columnWeights = new double[] { 0.0 };
        gbl_tablesPanel.rowWeights = new double[] { 0.0, 0.0, 1.0 };
        tablesPanel.setLayout(gbl_tablesPanel);

        JScrollPane mafScrollPane = new JScrollPane(tablesPanel);
        mafScrollPane.setMinimumSize(new Dimension(1600, 107));
        mafScrollPane.getHorizontalScrollBar().setMaximumSize(new Dimension(20, 20));
        mafScrollPane.setVerticalScrollBarPolicy(ScrollPaneConstants.VERTICAL_SCROLLBAR_NEVER);
        mafScrollPane.setHorizontalScrollBarPolicy(ScrollPaneConstants.HORIZONTAL_SCROLLBAR_ALWAYS);
        GridBagConstraints gbc_mafScrollPane = new GridBagConstraints();
        gbc_mafScrollPane.weightx = 1.0;
        gbc_mafScrollPane.anchor = GridBagConstraints.PAGE_START;
        gbc_mafScrollPane.fill = GridBagConstraints.HORIZONTAL;
        gbc_mafScrollPane.gridx = 2;
        gbc_mafScrollPane.gridy = 0;
        gbc_mafScrollPane.gridheight = 5;
        dataPanel.add(mafScrollPane, gbc_mafScrollPane);

        origMafTable = new JTable();
        origMafTable.setColumnSelectionAllowed(true);
        origMafTable.setCellSelectionEnabled(true);
        origMafTable.setBorder(new LineBorder(new Color(0, 0, 0)));
        origMafTable.setRowHeight(RowHeight);
        origMafTable.setAutoResizeMode(JTable.AUTO_RESIZE_OFF);
        origMafTable.setSelectionMode(ListSelectionModel.MULTIPLE_INTERVAL_SELECTION);
        origMafTable.setModel(new DefaultTableModel(2, MafTableColumnCount));
        origMafTable.setTableHeader(null);
        Utils.initializeTable(origMafTable, ColumnWidth);
        GridBagConstraints gbc_origMafTable = new GridBagConstraints();
        gbc_origMafTable.anchor = GridBagConstraints.PAGE_START;
        gbc_origMafTable.insets = new Insets(0, 0, 0, 0);
        gbc_origMafTable.fill = GridBagConstraints.HORIZONTAL;
        gbc_origMafTable.weightx = 1.0;
        gbc_origMafTable.weighty = 0;
        gbc_origMafTable.gridx = 0;
        gbc_origMafTable.gridy = 0;
        tablesPanel.add(origMafTable, gbc_origMafTable);
        excelAdapter.addTable(origMafTable, false, false, false, false, true, false, true, false, true);

        newMafTable = new JTable();
        newMafTable.setColumnSelectionAllowed(true);
        newMafTable.setCellSelectionEnabled(true);
        newMafTable.setBorder(new LineBorder(new Color(0, 0, 0)));
        newMafTable.setRowHeight(RowHeight);
        newMafTable.setAutoResizeMode(JTable.AUTO_RESIZE_OFF);
        newMafTable.setSelectionMode(ListSelectionModel.MULTIPLE_INTERVAL_SELECTION);
        newMafTable.setModel(new DefaultTableModel(2, MafTableColumnCount));
        newMafTable.setTableHeader(null);
        Utils.initializeTable(newMafTable, ColumnWidth);
        GridBagConstraints gbc_newMafTable = new GridBagConstraints();
        gbc_newMafTable.anchor = GridBagConstraints.PAGE_START;
        gbc_newMafTable.insets = new Insets(0, 0, 0, 0);
        gbc_newMafTable.fill = GridBagConstraints.HORIZONTAL;
        gbc_newMafTable.weightx = 1.0;
        gbc_newMafTable.weighty = 0;
        gbc_newMafTable.gridx = 0;
        gbc_newMafTable.gridy = 1;
        tablesPanel.add(newMafTable, gbc_newMafTable);
        excelAdapter.addTable(newMafTable, false, false, false, false, false, false, false, false, true);

        compMafTable = new JTable();
        compMafTable.setColumnSelectionAllowed(true);
        compMafTable.setCellSelectionEnabled(true);
        compMafTable.setBorder(new LineBorder(new Color(0, 0, 0)));
        compMafTable.setRowHeight(RowHeight);
        compMafTable.setAutoResizeMode(JTable.AUTO_RESIZE_OFF);
        compMafTable.setSelectionMode(ListSelectionModel.MULTIPLE_INTERVAL_SELECTION);
        compMafTable.setModel(new DefaultTableModel(1, MafTableColumnCount));
        compMafTable.setTableHeader(null);
        Utils.initializeTable(compMafTable, ColumnWidth);
        NumberFormatRenderer numericRenderer = new NumberFormatRenderer();
        numericRenderer.setFormatter(new DecimalFormat("0.000"));
        compMafTable.setDefaultRenderer(Object.class, numericRenderer);
        GridBagConstraints gbc_compMafTable = new GridBagConstraints();
        gbc_compMafTable.anchor = GridBagConstraints.PAGE_START;
        gbc_compMafTable.insets = new Insets(0, 0, 0, 0);
        gbc_compMafTable.fill = GridBagConstraints.HORIZONTAL;
        gbc_compMafTable.weightx = 1.0;
        gbc_compMafTable.weighty = 0;
        gbc_compMafTable.gridx = 0;
        gbc_compMafTable.gridy = 2;
        tablesPanel.add(compMafTable, gbc_compMafTable);
        compExcelAdapter.addTable(compMafTable, false, true, false, false, false, true, true, false, true);

        TableModelListener origTableListener = new TableModelListener() {
            public void tableChanged(TableModelEvent tme) {
                if (tme.getType() == TableModelEvent.UPDATE) {
                    int colCount = origMafTable.getColumnCount();
                    Utils.ensureColumnCount(colCount, newMafTable);
                    Utils.ensureColumnCount(colCount, compMafTable);
                    origMafData.clear();
                    String origY, origX, newY;
                    for (int i = 0; i < colCount; ++i) {
                        origY = origMafTable.getValueAt(1, i).toString();
                        if (Pattern.matches(Utils.fpRegex, origY)) {
                            origX = origMafTable.getValueAt(0, i).toString();
                            if (Pattern.matches(Utils.fpRegex, origX))
                                origMafData.add(Double.valueOf(origX), Double.valueOf(origY), false);
                            newY = newMafTable.getValueAt(1, i).toString();
                            if (Pattern.matches(Utils.fpRegex, newY))
                                compMafTable.setValueAt(
                                        ((Double.valueOf(newY) / Double.valueOf(origY)) - 1.0) * 100.0, 0, i);
                        } else
                            break;
                    }
                    origMafData.fireSeriesChanged();
                }
            }
        };

        TableModelListener newTableListener = new TableModelListener() {
            public void tableChanged(TableModelEvent tme) {
                if (tme.getType() == TableModelEvent.UPDATE) {
                    int colCount = newMafTable.getColumnCount();
                    Utils.ensureColumnCount(colCount, origMafTable);
                    Utils.ensureColumnCount(colCount, compMafTable);
                    newMafData.clear();
                    String newY, newX, origY;
                    for (int i = 0; i < colCount; ++i) {
                        newY = newMafTable.getValueAt(1, i).toString();
                        if (Pattern.matches(Utils.fpRegex, newY)) {
                            newX = newMafTable.getValueAt(0, i).toString();
                            if (Pattern.matches(Utils.fpRegex, newX))
                                newMafData.add(Double.valueOf(newX), Double.valueOf(newY), false);
                            origY = origMafTable.getValueAt(1, i).toString();
                            if (Pattern.matches(Utils.fpRegex, origY))
                                compMafTable.setValueAt(
                                        ((Double.valueOf(newY) / Double.valueOf(origY)) - 1.0) * 100.0, 0, i);
                        } else
                            break;
                    }
                    newMafData.fireSeriesChanged();
                }
            }
        };

        origMafTable.getModel().addTableModelListener(origTableListener);
        newMafTable.getModel().addTableModelListener(newTableListener);

        Action action = new AbstractAction() {
            private static final long serialVersionUID = 8148393537657380215L;

            public void actionPerformed(ActionEvent e) {
                TableCellListener tcl = (TableCellListener) e.getSource();
                if (Pattern.matches(Utils.fpRegex, compMafTable.getValueAt(0, tcl.getColumn()).toString())) {
                    if (Pattern.matches(Utils.fpRegex,
                            origMafTable.getValueAt(1, tcl.getColumn()).toString())) {
                        double corr = Double.valueOf(compMafTable.getValueAt(0, tcl.getColumn()).toString())
                                / 100.0 + 1.0;
                        newMafTable.setValueAt(
                                Double.valueOf(origMafTable.getValueAt(1, tcl.getColumn()).toString()) * corr,
                                1, tcl.getColumn());
                    }
                } else
                    compMafTable.setValueAt(tcl.getOldValue(), 0, tcl.getColumn());
            }
        };

        setCompMafCellListener(new TableCellListener(compMafTable, action));

        // CHART

        JFreeChart chart = ChartFactory.createXYLineChart(null, null, null, null, PlotOrientation.VERTICAL,
                false, true, false);
        chart.setBorderVisible(true);
        chartPanel = new ChartPanel(chart, true, true, true, true, true);
        chartPanel.setAutoscrolls(true);

        GridBagConstraints gbl_chartPanel = new GridBagConstraints();
        gbl_chartPanel.anchor = GridBagConstraints.PAGE_START;
        gbl_chartPanel.fill = GridBagConstraints.BOTH;
        gbl_chartPanel.insets = new Insets(1, 1, 1, 1);
        gbl_chartPanel.weightx = 1.0;
        gbl_chartPanel.weighty = 1.0;
        gbl_chartPanel.gridx = 0;
        gbl_chartPanel.gridy = 5;
        gbl_chartPanel.gridheight = 1;
        gbl_chartPanel.gridwidth = 3;
        dataPanel.add(chartPanel, gbl_chartPanel);

        XYSplineRenderer lineRenderer = new XYSplineRenderer(3);
        lineRenderer.setUseFillPaint(true);
        lineRenderer.setBaseToolTipGenerator(
                new StandardXYToolTipGenerator(StandardXYToolTipGenerator.DEFAULT_TOOL_TIP_FORMAT,
                        new DecimalFormat("0.00"), new DecimalFormat("0.00")));

        Stroke stroke = new BasicStroke(2.0f, BasicStroke.CAP_ROUND, BasicStroke.JOIN_ROUND, 1.0f, null, 0.0f);
        lineRenderer.setSeriesStroke(0, stroke);
        lineRenderer.setSeriesStroke(1, stroke);
        lineRenderer.setSeriesPaint(0, new Color(201, 0, 0));
        lineRenderer.setSeriesPaint(1, new Color(0, 0, 255));
        lineRenderer.setSeriesShape(0, ShapeUtilities.createDiamond((float) 2.5));
        lineRenderer.setSeriesShape(1, ShapeUtilities.createDownTriangle((float) 2.5));
        lineRenderer.setLegendItemLabelGenerator(new StandardXYSeriesLabelGenerator() {
            private static final long serialVersionUID = -4045338273187150888L;

            public String generateLabel(XYDataset dataset, int series) {
                XYSeries xys = ((XYSeriesCollection) dataset).getSeries(series);
                return xys.getDescription();
            }
        });

        NumberAxis mafvDomain = new NumberAxis(XAxisName);
        mafvDomain.setAutoRangeIncludesZero(false);
        mafvDomain.setAutoRange(true);
        mafvDomain.setAutoRangeStickyZero(false);
        NumberAxis mafgsRange = new NumberAxis(YAxisName);
        mafgsRange.setAutoRangeIncludesZero(false);
        mafgsRange.setAutoRange(true);
        mafgsRange.setAutoRangeStickyZero(false);

        XYSeriesCollection lineDataset = new XYSeriesCollection();
        origMafData.setDescription(origMaf);
        newMafData.setDescription(newMaf);
        lineDataset.addSeries(origMafData);
        lineDataset.addSeries(newMafData);

        XYPlot plot = chart.getXYPlot();
        plot.setRangePannable(true);
        plot.setDomainPannable(true);
        plot.setDomainGridlinePaint(Color.DARK_GRAY);
        plot.setRangeGridlinePaint(Color.DARK_GRAY);
        plot.setBackgroundPaint(new Color(224, 224, 224));

        plot.setDataset(0, lineDataset);
        plot.setRenderer(0, lineRenderer);
        plot.setDomainAxis(0, mafvDomain);
        plot.setRangeAxis(0, mafgsRange);
        plot.mapDatasetToDomainAxis(0, 0);
        plot.mapDatasetToRangeAxis(0, 0);

        LegendTitle legend = new LegendTitle(plot.getRenderer());
        legend.setItemFont(new Font("Arial", 0, 10));
        legend.setPosition(RectangleEdge.TOP);
        chart.addLegend(legend);

    } catch (Exception e) {
        logger.error(e);
    }
}

From source file:probe.com.view.body.quantdatasetsoverview.quantproteinstabsheet.studies.ProteinStudyComparisonScatterPlotLayout.java

/**
 * Creates a sample jFreeChart./*from  w  ww .  java 2 s. com*/
 *
 * @param dataset the dataset.
 *
 * @return The jFreeChart.
 */
private void generateScatterplotchart(DiseaseGroupsComparisonsProteinLayout cp, int w, int h) {

    final XYSeriesCollection dataset = new XYSeriesCollection();
    XYSeries downSer = new XYSeries(0);
    XYSeries stableSer = new XYSeries(1);
    XYSeries upSer = new XYSeries(2);

    XYSeries novalueProvidedSer = new XYSeries(3);

    XYSeries downSerII = new XYSeries(4);
    XYSeries stableSerII = new XYSeries(5);
    XYSeries upSerII = new XYSeries(6);
    XYSeries novalueProvidedSerII = new XYSeries(7);

    //        XYSeries plusSeries = new XYSeries(6);
    double downCounter = 1;
    double stableCounter = 3;
    double upCounter = 5;
    double novalueProvidedCounter = 3;

    patientGroupsNumToDsIdMap.clear();

    final Map<Integer, int[]> paTGrNumbtrendMap = new HashMap<Integer, int[]>();
    double maxPatNumber = -1.0;
    for (String protTrend : cp.getPatientsNumToTrindMap().keySet()) {
        List<Integer> patNums = cp.getPatientsNumToTrindMap().get(protTrend);
        int coun = 0;
        for (int i : patNums) {
            if (i > maxPatNumber) {
                maxPatNumber = i;
            }
            if (!patientGroupsNumToDsIdMap.containsKey(i)) {
                ComparisonDetailsBean pGr = new ComparisonDetailsBean();
                patientGroupsNumToDsIdMap.put(i, pGr);

            }
            if (!paTGrNumbtrendMap.containsKey(i)) {
                int[] values = new int[4];
                paTGrNumbtrendMap.put(i, values);
            }

            int[] values = paTGrNumbtrendMap.get(i);
            ComparisonDetailsBean pGr = patientGroupsNumToDsIdMap.get(i);
            if (protTrend.equalsIgnoreCase("noValueProvided")) {
                values[3] = values[3] + 1;
                pGr.addNovalueProvided(cp.getDSID(3, coun));

            } else if (protTrend.equalsIgnoreCase("up")) {
                values[2] = values[2] + 1;

                pGr.addUpRegulated(cp.getDSID(0, coun));

            } else if (protTrend.equalsIgnoreCase("down")) {
                values[0] = values[0] + 1;
                pGr.addDownRegulated(cp.getDSID(2, coun));
            } else {
                values[1] = values[1] + 1;
                pGr.addNotRegulated(cp.getDSID(1, coun));
            }
            paTGrNumbtrendMap.put(i, values);
            patientGroupsNumToDsIdMap.put(i, pGr);
            coun++;
        }

    }

    for (int i : paTGrNumbtrendMap.keySet()) {
        int[] values = paTGrNumbtrendMap.get(i);
        if ((values[2] > 1)) {
            upSer.add(upCounter, i);
            upSerII.add(upCounter, i);
        } else if ((values[2] == 1)) {
            upSer.add(upCounter, i);
        }
        if ((values[1] == 1)) {
            stableSer.add(stableCounter, i);
        } else if ((values[1] > 1)) {
            stableSer.add(stableCounter, i);
            stableSerII.add(stableCounter, i);
        }

        if ((values[0] > 1)) {
            downSer.add(downCounter, i);
            downSerII.add(downCounter, i);
        } else if ((values[0] == 1)) {
            downSer.add(downCounter, i);
        }
        if ((values[3] == 1)) {
            novalueProvidedSer.add(novalueProvidedCounter, i);
        } else if ((values[3] > 1)) {
            novalueProvidedSer.add(stableCounter, i);
            novalueProvidedSerII.add(stableCounter, i);
        }

    }

    dataset.addSeries(downSer);
    dataset.addSeries(stableSer);
    dataset.addSeries(upSer);
    dataset.addSeries(novalueProvidedSer);
    dataset.addSeries(downSerII);
    dataset.addSeries(stableSerII);
    dataset.addSeries(upSerII);
    dataset.addSeries(novalueProvidedSerII);
    //        if((downSerII.getItemCount()+stableSerII.getItemCount()+upSerII.getItemCount()+downSer.getItemCount()+stableSer.getItemCount()+upSer.getItemCount())==0)
    //            return;
    //        dataset.addSeries(plusSeries);
    final String[] labels = new String[] { " ", ("Decreased (" + cp.getSignificantDown() + ")"), " ",
            ("Equal (" + cp.getStable() + ")"), " ", ("Increased (" + cp.getSignificantUp() + ")"), "" };
    final Color[] labelsColor = new Color[] { Color.LIGHT_GRAY, new Color(80, 183, 71), Color.LIGHT_GRAY,
            new Color(1, 141, 244), Color.LIGHT_GRAY, Color.RED, Color.LIGHT_GRAY };
    final SymbolAxis domainAxis = new SymbolAxis("X", labels) {

        @Override
        protected void drawGridBandsVertical(Graphics2D g2, Rectangle2D drawArea, Rectangle2D plotArea,
                boolean firstGridBandIsDark, List ticks) {
            List udatedTicksList = new ArrayList();

            for (Object tick : ticks) {
                if (tick.toString().equalsIgnoreCase(labels[custTrend + 1])) {
                    udatedTicksList.add(tick);
                }
            }
            //                System.out.println("at ticks is "+ticks);
            //                 System.out.println("at udatedTicksList is "+udatedTicksList);
            //                int factor = (int) ((plotArea.getHeight() / 5) * 0.25);
            //
            //                Rectangle2D up = new Rectangle((int) drawArea.getX(), (int) drawArea.getY() - factor, (int) drawArea.getWidth(), (int) drawArea.getHeight());
            //                Rectangle2D pa = new Rectangle((int) plotArea.getX(), (int) plotArea.getY() - factor, (int) plotArea.getWidth(), (int) plotArea.getHeight());

            super.drawGridBandsVertical(g2, drawArea, plotArea, firstGridBandIsDark, udatedTicksList); //To change body of generated methods, choose Tools | Templates.
        }

        int x = 0;

        @Override
        public Paint getTickLabelPaint() {
            if (x >= labels.length) {
                x = 0;
            }
            return labelsColor[x++];
        }

    };
    domainAxis.setAutoRangeIncludesZero(false);
    Font f = new Font("Verdana", Font.PLAIN, 11);
    domainAxis.setTickLabelFont(f);
    domainAxis.setAutoRange(false);
    domainAxis.setLabel(null);

    //        domainAxis.setGridBandsVisible(false);
    String xTile = "#Patients";

    JFreeChart jFreeChart = ChartFactory.createScatterPlot(null, null, // domain axis label
            null, // range axis label
            dataset, // data
            PlotOrientation.HORIZONTAL, // orientation
            false, // include legend
            false, // tooltips?
            false // URLs?
    );
    XYPlot plot1 = (XYPlot) jFreeChart.getPlot();
    XYPlot xyplot = new XYPlot(dataset, plot1.getDomainAxis(), plot1.getRangeAxis(), plot1.getRenderer()) {

        @Override
        public void drawDomainTickBands(Graphics2D g2, Rectangle2D dataArea, List ticks) {

            if (custTrend == -1) {
                super.drawDomainTickBands(g2, dataArea, ticks);
                return;

            }
            List udatedTicksList = new ArrayList();
            for (Object tick : ticks) {
                if (tick.toString().equalsIgnoreCase(labels[custTrend + 1])) {
                    udatedTicksList.add(tick);
                }
            }
            Rectangle2D up;
            int factor = (int) ((dataArea.getHeight() / 5) * 0.5);
            if (custTrend == 4) {
                up = new Rectangle((int) dataArea.getX(), (int) dataArea.getY() + factor,
                        (int) dataArea.getWidth(), (int) dataArea.getHeight());

            } else if (custTrend == 2) {
                up = new Rectangle((int) dataArea.getX(), (int) dataArea.getY() - factor,
                        (int) dataArea.getWidth(), (int) dataArea.getHeight());

            } else {
                up = new Rectangle((int) dataArea.getX(), (int) dataArea.getY() - factor,
                        (int) dataArea.getWidth(), (int) dataArea.getHeight());
            }

            super.drawDomainTickBands(g2, up, udatedTicksList); //To change body of generated methods, choose Tools | Templates.
        }

        @Override
        protected void drawDomainGridlines(Graphics2D g2, Rectangle2D dataArea, List ticks) {
            super.drawDomainGridlines(g2, dataArea, ticks); //To change body of generated methods, choose Tools | Templates.
        }

        private int x = 0;

        @Override
        public Paint getDomainGridlinePaint() {
            if (x >= labels.length) {
                x = 0;
            }
            if (x == 1 || x == 3 || x == 5) {
                x++;
                return Color.WHITE;
            } else {
                x++;
                return super.getDomainGridlinePaint(); //To change body of generated methods, choose Tools | Templates.
            }
        }
    };
    if (custTrend != -1) {
        domainAxis.setGridBandsVisible(true);
        if (custTrend == 4) {
            domainAxis.setGridBandPaint(Color.decode("#ffe5e5"));
            xyplot.setDomainTickBandPaint(Color.decode("#ffe5e5"));
            domainAxis.setGridBandAlternatePaint(Color.decode("#ffe5e5"));
        } else if (custTrend == 0) {
            domainAxis.setGridBandPaint(Color.decode("#e5ffe5"));
            xyplot.setDomainTickBandPaint(Color.white);
        } else if (custTrend == 2) {
            domainAxis.setGridBandPaint(Color.decode("#e6f4ff"));
            xyplot.setDomainTickBandPaint(Color.white);
        }

    } else {
        domainAxis.setGridBandsVisible(false);
    }
    xyplot.setOrientation(PlotOrientation.HORIZONTAL);
    JFreeChart tempScatterPlot = new JFreeChart(xyplot);
    tempScatterPlot.setBackgroundPaint(Color.WHITE);
    tempScatterPlot.getLegend().setVisible(false);
    Color c = new Color(242, 242, 242);
    xyplot.setDomainAxis(domainAxis);
    xyplot.setDomainGridlinePaint(Color.GRAY);
    xyplot.setDomainGridlinesVisible(true);
    xyplot.setRangeGridlinesVisible(true);
    xyplot.setRangeGridlinePaint(Color.GRAY);
    xyplot.setOutlinePaint(Color.GRAY);
    XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) xyplot.getRenderer();
    ValueAxis va = xyplot.getDomainAxis();
    va.setAutoRange(false);
    va.setMinorTickCount(0);
    va.setVisible(true);
    maxPatNumber = Math.ceil(maxPatNumber / 100.0) * 100;
    xyplot.getRangeAxis().setRange(0, maxPatNumber);
    NumberAxis rangeAxis = (NumberAxis) xyplot.getRangeAxis();
    rangeAxis.setTickUnit(new NumberTickUnit(10));
    rangeAxis.setLabel(xTile);
    rangeAxis.setLabelFont(f);
    rangeAxis.setLabelPaint(Color.GRAY);

    va.setRange(0, 6);
    xyplot.setBackgroundPaint(Color.WHITE);
    renderer.setUseOutlinePaint(true);

    Color c0 = new Color(80, 183, 71);
    renderer.setSeriesPaint(0, c0);
    renderer.setSeriesOutlinePaint(0, Color.WHITE);

    Color c1 = new Color(1, 141, 244);
    renderer.setSeriesPaint(1, c1);
    renderer.setSeriesOutlinePaint(1, Color.WHITE);

    Color c2 = new Color(204, 0, 0);
    renderer.setSeriesPaint(2, c2);
    renderer.setSeriesOutlinePaint(2, Color.WHITE);

    renderer.setSeriesPaint(3, Color.decode("#b5babb"));
    renderer.setSeriesOutlinePaint(3, Color.WHITE);

    renderer.setSeriesPaint(4, new Color(150, 212, 145));
    renderer.setSeriesOutlinePaint(4, new Color(150, 212, 145));

    renderer.setSeriesPaint(5, new Color(103, 187, 248));
    renderer.setSeriesOutlinePaint(5, new Color(103, 187, 248));

    renderer.setSeriesPaint(6, new Color(224, 102, 102));
    renderer.setSeriesOutlinePaint(6, new Color(224, 102, 102));

    renderer.setSeriesPaint(7, Color.decode("#b5babb"));
    renderer.setSeriesOutlinePaint(7, Color.GRAY);

    //        renderer.setSeriesPaint(6, Color.BLACK);
    //        renderer.setSeriesOutlinePaint(6, Color.BLACK);
    Shape downArr = ShapeUtilities.createDownTriangle(7f);
    Shape notRShape = ShapeUtilities.createDiamond(7f);
    Shape upArr = ShapeUtilities.createUpTriangle(7);

    Shape downArrII = ShapeUtilities.createTranslatedShape(ShapeUtilities.createDownTriangle(6f), 5, -5);
    Shape notRShapeII = ShapeUtilities.createTranslatedShape(ShapeUtilities.createDiamond(6f), 0, -7);
    Shape upArrII = ShapeUtilities.createTranslatedShape(ShapeUtilities.createUpTriangle(6f), 4, -4);

    //        Shape plus = ShapeUtilities.createTranslatedShape(ShapeUtilities.createRegularCross(3f, 0.4f), 11, -7);
    renderer.setSeriesShape(0, downArr);
    renderer.setSeriesShape(1, notRShape);
    renderer.setSeriesShape(2, upArr);

    renderer.setSeriesShape(3, notRShape);

    renderer.setSeriesShape(4, downArrII);
    renderer.setSeriesShape(5, notRShapeII);
    renderer.setSeriesShape(6, upArrII);

    renderer.setSeriesShape(7, notRShapeII);
    //       renderer.setSeriesShape(6, plus);

    renderer.setBaseItemLabelsVisible(true);
    renderer.setBaseItemLabelGenerator(new SymbolicXYItemLabelGenerator() {
        private final int[] indexer = new int[] { 0, 1, 2, 3, 0, 1, 2, 3 };

        @Override
        public String generateLabel(XYDataset dataset, int series, int category) {
            if (series > 3) {
                int patNumber = (int) dataset.getYValue(series, category);
                //                    int trend = (int) dataset.getXValue(series, category);
                if (series == 7 || series == 5) {
                    return "\t  " + paTGrNumbtrendMap.get(patNumber)[indexer[series]];
                } else {
                    return "\t   " + paTGrNumbtrendMap.get(patNumber)[indexer[series]];
                }

            }

            return ""; //To change body of generated methods, choose Tools | Templates.
        }

    });
    ItemLabelPosition position = new ItemLabelPosition(ItemLabelAnchor.OUTSIDE12, TextAnchor.BASELINE_LEFT,
            TextAnchor.TOP_LEFT, 0.0);

    renderer.setSeriesPositiveItemLabelPosition(4, position);
    renderer.setSeriesPositiveItemLabelPosition(5, position);
    renderer.setSeriesPositiveItemLabelPosition(6, position);
    renderer.setSeriesPositiveItemLabelPosition(7, position);

    renderer.setBaseItemLabelFont(f);

    tempScatterPlot.setBorderVisible(false);

    xyplot.setSeriesRenderingOrder(SeriesRenderingOrder.REVERSE);

    heighlightedScatterPlottImgUrl = saveToFile(tempScatterPlot, w, h, defaultScatterPlotRenderingInfo);

    xyplot.setBackgroundPaint(Color.WHITE);
    defaultScatterPlottImgUrl = saveToFile(tempScatterPlot, w, h, defaultScatterPlotRenderingInfo);

    //        xyplot.setBackgroundPaint(c);

    if (custTrend != -1) {
        domainAxis.setGridBandsVisible(true);
        if (custTrend == 4) {
            domainAxis.setGridBandPaint(Color.decode("#ffe5e5"));
            xyplot.setDomainTickBandPaint(Color.decode("#ffe5e5"));
            domainAxis.setGridBandAlternatePaint(Color.decode("#ffe5e5"));
        } else if (custTrend == 0) {
            domainAxis.setGridBandPaint(Color.decode("#e5ffe5"));
            xyplot.setDomainTickBandPaint(c);
        } else if (custTrend == 2) {
            domainAxis.setGridBandPaint(Color.decode("#e6f4ff"));
            xyplot.setDomainTickBandPaint(c);
        }

    }

    String textTitle = comparisonTitle.getValue().split("bold;'>")[1].replace("</font>", "");
    TextTitle title = new TextTitle(textTitle, f);

    scatterPlot = new JFreeChart(xyplot);
    scatterPlot.setTitle(title);

    scatterPlot.setBorderVisible(false);
    scatterPlot.setBackgroundPaint(Color.WHITE);
    scatterPlot.getLegend().setVisible(false);
    dsKeyDatasetMap.clear();
    for (int i = 0; i < defaultScatterPlotRenderingInfo.getEntityCollection().getEntityCount(); i++) {
        final ChartEntity entity = defaultScatterPlotRenderingInfo.getEntityCollection().getEntity(i);
        if (entity instanceof XYItemEntity) {

            int x = ((XYItemEntity) entity).getSeriesIndex();
            int y = ((XYItemEntity) entity).getItem();

            if (((XYItemEntity) entity).getDataset().getYValue(x,
                    y) > (int) ((XYItemEntity) entity).getDataset().getYValue(x, y)) {
                continue;
            }
            if (((XYItemEntity) entity).getSeriesIndex() > 3) {

                continue;
            }

            String[] arr = ((XYItemEntity) entity).getShapeCoords().split(",");
            int xSer = Integer.valueOf(arr[0]);
            int ySer = Integer.valueOf(arr[1]);
            int ySerEnd = Integer.valueOf(arr[3]);
            int patGrNumber = (int) ((XYItemEntity) entity).getDataset().getYValue(x, y);
            int trend = Integer.valueOf(((XYItemEntity) entity).getDataset()
                    .getSeriesKey(((XYItemEntity) entity).getSeriesIndex()).toString());

            ComparisonDetailsBean cpDetails = patientGroupsNumToDsIdMap.get(patGrNumber);
            List<Integer> dsList = cpDetails.getRegulatedList(trend);
            StringBuilder sb = new StringBuilder();

            for (int dsId : dsList) {
                QuantDatasetObject ds;

                sb.append("<h4>").append((Quant_Central_Manager.getFullQuantDatasetMap().get(dsId)).getAuthor())
                        .append(" ")
                        .append((Quant_Central_Manager.getFullQuantDatasetMap().get(dsId)).getYear())
                        .append("<h4/>");
                sb.append("<p></p>");
                ds = Quant_Central_Manager.getFullQuantDatasetMap().get(dsId);

                dsKeyDatasetMap.put("_-_" + dsId + "_-_" + comparisonProtein.getProteinAccssionNumber() + "_-_",
                        ds);
            }
            String tooltip = sb.toString().substring(0, sb.toString().length() - 7);
            SquaredDot square = new SquaredDot("squared");
            if (paTGrNumbtrendMap.get(patGrNumber)[trend] > 1) {
                square.setWidth(20 + "px");
                square.setHeight(15 + "px");
            } else {
                square.setWidth(10 + "px");
                square.setHeight(10 + "px");
            }
            square.setDescription(tooltip);
            square.setParam("trend", trend);
            square.setParam("pGrNumber", patGrNumber);
            int top = (ySer - 4);
            if (ySer > ySerEnd) {
                top = ySerEnd - 3;
            }
            defaultChartLayout.addComponent(square, "left: " + (xSer - 5) + "px; top: " + top + "px;");
        }
    }

}

From source file:lucee.runtime.tag.Chart.java

private void setMarker(JFreeChart chart, Plot p) {
    if (!showmarkers)
        return;/*from  www. j  a v  a 2s . co m*/

    if (markersize < 1 || markersize > 100)
        markersize = 4;

    if (p instanceof XYPlot) {
        XYPlot xyp = (XYPlot) p;
        XYItemRenderer r = xyp.getRenderer();
        if (r instanceof XYLineAndShapeRenderer) {
            XYLineAndShapeRenderer xyr = (XYLineAndShapeRenderer) r;
            xyr.setBaseShapesVisible(true);
            xyr.setBaseShapesFilled(true);

            int seriesCount = _series.size();
            for (int i = 0; i < seriesCount; i++) {
                xyr.setSeriesShapesVisible(i, true);
                xyr.setSeriesItemLabelsVisible(i, true);
                xyr.setSeriesShape(i, ShapeUtilities.createDiamond(markersize));
                xyr.setUseFillPaint(true);
                xyr.setBaseFillPaint(databackgroundcolor);
            }
        }
    } else if (p instanceof CategoryPlot) {
        CategoryPlot cp = (CategoryPlot) p;
        CategoryItemRenderer r = cp.getRenderer();
        if (r instanceof LineAndShapeRenderer) {
            LineAndShapeRenderer lsr = (LineAndShapeRenderer) r;

            int seriesCount = _series.size();
            for (int i = 0; i < seriesCount; i++) {
                lsr.setSeriesShapesVisible(i, true);
                lsr.setSeriesItemLabelsVisible(i, true);
                lsr.setSeriesShape(i, ShapeUtilities.createDiamond(markersize));
                lsr.setUseFillPaint(true);
                lsr.setBaseFillPaint(databackgroundcolor);
            }
        }
    }
}

From source file:com.appnativa.rare.ui.chart.jfreechart.ChartHandler.java

protected Shape getDefaultShape(int index, ArrayList<Shape> markers) {
    Shape s;/* ww w.  j  a va2 s .co  m*/

    index = index % 4;

    while (markers.size() <= index) {
        switch (index) {
        case 0:
            s = new RoundRectangle2D.Double(-3, -3, 6, 6, 6, 6);

            break;

        case 1:
            s = new Rectangle2D.Double(-3, -3, 6, 6);

            break;

        case 2: {
            s = ShapeUtilities.createDiamond(4);

            break;
        }

        default: {
            s = ShapeUtilities.createUpTriangle(4);
        }
        }

        markers.add(s);
    }

    s = markers.get(index);

    return s;
}

From source file:jhplot.HChart.java

/**
 * Get shape depending on the marker index.
 * /*from   w w w.  j  a  v  a  2 s.co  m*/
 * @param index
 * @return
 */
private Shape getShape(int index, float size) {

    // Shape s = ShapeUtilities.createDiamond(4F);
    double x = -0.5 * size;
    if (index == 0)
        return new java.awt.geom.Ellipse2D.Double(x, x, size, size);
    if (index == 1)
        return new java.awt.geom.Rectangle2D.Double(x, x, size, size);
    if (index == 2)
        return ShapeUtilities.createDiamond(size);
    if (index == 3)
        return ShapeUtilities.createDownTriangle(size);

    if (index == 4)
        return new java.awt.geom.Ellipse2D.Double(x, x, size, size);
    if (index == 5)
        return new java.awt.geom.Rectangle2D.Double(x, x, size, size);
    if (index == 6)
        return ShapeUtilities.createDiamond(size);
    if (index == 7)
        return ShapeUtilities.createDownTriangle(size);

    if (index == 7)
        return ShapeUtilities.createRegularCross(0, size);
    if (index == 8)
        return ShapeUtilities.createDiagonalCross(0, size);
    if (index == 9)
        return ShapeUtilities.createDiagonalCross(0, size);
    if (index == 10)
        return ShapeUtilities.createDiagonalCross(0, size);
    if (index == 11)
        new java.awt.geom.Ellipse2D.Double(0.5, 0.5, 1, 1);
    if (index == 12)
        return ShapeUtilities.createDiagonalCross(0, size);

    return new java.awt.geom.Ellipse2D.Double(x, x, size, size);

}

From source file:com.planetmayo.debrief.satc_rcp.views.MaintainContributionsView.java

protected void redoOwnshipStates() {
    if (legPlot == null)
        return;//  www.ja  v a 2s.  co  m

    boolean showCourses = true;
    if (showOSCourse != null)
        showCourses = showOSCourse.getSelection();

    java.awt.Color courseCol = java.awt.Color.blue.darker().darker();
    java.awt.Color speedCol = java.awt.Color.blue.brighter().brighter();

    // ok, now loop through and set them
    long startTime = Long.MAX_VALUE;
    long endTime = Long.MIN_VALUE;

    // clear any datasets
    legPlot.setDataset(0, null);
    legPlot.setDataset(1, null);

    // hmm, actually we have to remove any target leg markers
    @SuppressWarnings("unchecked")
    Collection<IntervalMarker> markers = legPlot.getDomainMarkers(Layer.BACKGROUND);
    if (markers != null) {
        ArrayList<IntervalMarker> markersToDelete = new ArrayList<IntervalMarker>(markers);
        Iterator<IntervalMarker> mIter = markersToDelete.iterator();
        while (mIter.hasNext()) {
            IntervalMarker im = mIter.next();
            legPlot.removeDomainMarker(im);
        }
    }

    // hey, does it have any ownship legs?
    TimeSeriesCollection tscC = new TimeSeriesCollection();
    TimeSeriesCollection tscS = new TimeSeriesCollection();
    TimeSeriesCollection tscCLegs = new TimeSeriesCollection();
    TimeSeriesCollection tscSLegs = new TimeSeriesCollection();
    TimeSeries courses = new TimeSeries("Course");
    TimeSeries bearings = new TimeSeries("Bearings");
    TimeSeries speeds = new TimeSeries("Speed");
    TimeSeries courseLegs = new TimeSeries("Course (leg)");
    TimeSeries speedLegs = new TimeSeries("Speed (leg)");

    Iterator<BaseContribution> conts = activeSolver.getContributions().iterator();
    while (conts.hasNext()) {
        BaseContribution baseC = conts.next();
        if (baseC.isActive())
            if (baseC instanceof BearingMeasurementContribution) {
                BearingMeasurementContribution bmc = (BearingMeasurementContribution) baseC;

                Iterator<LegOfData> lIter = null;
                LegOfData thisLeg = null;

                if (bmc.getOwnshipLegs() != null) {
                    lIter = bmc.getOwnshipLegs().iterator();
                    thisLeg = lIter.next();
                }

                List<HostState> hostStates = bmc.getHostState();
                if (hostStates != null) {
                    Iterator<HostState> stateIter = hostStates.iterator();
                    while (stateIter.hasNext()) {
                        BearingMeasurementContribution.HostState hostState = stateIter.next();
                        long thisTime = hostState.time;
                        double thisCourse = hostState.courseDegs;
                        if (showCourses)
                            courses.add(new FixedMillisecond(thisTime), thisCourse);
                        double thisSpeed = hostState.speedKts;
                        speeds.add(new FixedMillisecond(thisTime), thisSpeed);
                        startTime = Math.min(thisTime, startTime);
                        endTime = Math.max(thisTime, endTime);

                        // sort out if this is in a leg or not
                        if (thisLeg != null) {
                            if (thisTime > thisLeg.getEnd() && lIter.hasNext()) {
                                thisLeg = lIter.next();
                            } else {
                                if (thisTime >= thisLeg.getStart()) {
                                    speedLegs.add(new FixedMillisecond(thisTime), thisSpeed);
                                    if (showCourses)
                                        courseLegs.add(new FixedMillisecond(thisTime), thisCourse);
                                }
                            }
                        }
                    }
                }

                // also, we wish to show the bearings from the BMC
                Iterator<BMeasurement> cuts = bmc.getMeasurements().iterator();
                while (cuts.hasNext()) {
                    BearingMeasurementContribution.BMeasurement measurement = cuts.next();
                    if (measurement.isActive()) {
                        long thisT = measurement.getDate().getTime();
                        bearings.add(new FixedMillisecond(thisT),
                                Math.toDegrees(Math.abs(measurement.getBearingRads())));
                    }
                }

            }
    }

    // HEY, also shade the ownship legs
    conts = activeSolver.getContributions().iterator();
    while (conts.hasNext()) {
        BaseContribution baseC = conts.next();
        if (baseC.isActive()) {
            if (baseC instanceof BearingMeasurementContribution) {
                BearingMeasurementContribution bmc = (BearingMeasurementContribution) baseC;

                Iterator<LegOfData> lIter = null;
                if (bmc.getOwnshipLegs() != null) {
                    int ctr = 1;
                    lIter = bmc.getOwnshipLegs().iterator();
                    while (lIter.hasNext()) {
                        LegOfData thisL = lIter.next();
                        long thisStart = thisL.getStart();
                        long thisFinish = thisL.getEnd();

                        java.awt.Color transCol = new java.awt.Color(0, 0, 255, 12);

                        final Marker bst = new IntervalMarker(thisStart, thisFinish, transCol,
                                new BasicStroke(2.0f), null, null, 1.0f);
                        bst.setLabel("O/S-" + ctr++);
                        bst.setLabelAnchor(RectangleAnchor.TOP_LEFT);
                        bst.setLabelFont(new Font("SansSerif", Font.ITALIC + Font.BOLD, 10));
                        bst.setLabelTextAnchor(TextAnchor.TOP_LEFT);
                        legPlot.addDomainMarker(bst, Layer.BACKGROUND);
                    }
                }
            }
        }
    }

    tscS.addSeries(speeds);
    tscSLegs.addSeries(speedLegs);
    tscC.addSeries(bearings);

    if (showCourses) {
        tscC.addSeries(courses);
        tscCLegs.addSeries(courseLegs);
    }

    legPlot.setDataset(0, null);
    legPlot.setDataset(1, null);
    legPlot.setDataset(2, null);
    legPlot.setDataset(3, null);
    legPlot.setDataset(0, tscC);
    legPlot.setDataset(1, tscS);
    legPlot.setDataset(2, tscCLegs);
    legPlot.setDataset(3, tscSLegs);

    final NumberAxis axis2 = new NumberAxis("Speed (Kts)");
    legPlot.setRangeAxis(1, axis2);
    legPlot.mapDatasetToRangeAxis(1, 1);
    legPlot.mapDatasetToRangeAxis(3, 1);

    legPlot.getRangeAxis(0).setLabel("Crse/Brg (Degs)");
    legPlot.mapDatasetToRangeAxis(0, 0);
    legPlot.mapDatasetToRangeAxis(2, 0);

    final XYLineAndShapeRenderer lineRenderer1 = new XYLineAndShapeRenderer(true, true);
    lineRenderer1.setSeriesPaint(1, courseCol);
    lineRenderer1.setSeriesShape(1, ShapeUtilities.createDiamond(0.1f));
    lineRenderer1.setSeriesPaint(0, java.awt.Color.RED);
    lineRenderer1.setSeriesShape(0, ShapeUtilities.createDiamond(2f));

    final XYLineAndShapeRenderer lineRenderer2 = new XYLineAndShapeRenderer(true, false);
    lineRenderer2.setSeriesPaint(0, speedCol);

    final XYLineAndShapeRenderer lineRenderer3 = new XYLineAndShapeRenderer(false, true);
    lineRenderer3.setSeriesPaint(0, courseCol);
    lineRenderer3.setSeriesShape(0, ShapeUtilities.createUpTriangle(2f));

    final XYLineAndShapeRenderer lineRenderer4 = new XYLineAndShapeRenderer(false, true);
    lineRenderer4.setSeriesPaint(0, speedCol);
    lineRenderer4.setSeriesShape(0, ShapeUtilities.createDownTriangle(2f));

    // ok, and store them
    legPlot.setRenderer(0, lineRenderer1);
    legPlot.setRenderer(1, lineRenderer2);
    legPlot.setRenderer(2, lineRenderer3);
    legPlot.setRenderer(3, lineRenderer4);

    if (startTime != Long.MAX_VALUE)
        legPlot.getDomainAxis().setRange(startTime, endTime);

    // ok - get the straight legs to sort themselves out
    // redoStraightLegs();
}