Java tutorial
/* * Copyright (c) 2006-2015 Massachusetts General Hospital * All rights reserved. This program and the accompanying materials * are made available under the terms of the i2b2 Software License v2.1 * which accompanies this distribution. * * Contributors: * Lori Phillips */ package edu.harvard.i2b2.eclipse.plugins.ontology.views.edit; import java.util.Iterator; import java.util.List; import org.apache.axis2.AxisFault; import org.apache.commons.logging.Log; import org.apache.commons.logging.LogFactory; import org.eclipse.jface.resource.ImageDescriptor; import org.eclipse.jface.wizard.IWizardPage; import org.eclipse.jface.wizard.WizardPage; import org.eclipse.swt.SWT; import org.eclipse.swt.events.ModifyEvent; import org.eclipse.swt.events.ModifyListener; import org.eclipse.swt.events.SelectionEvent; import org.eclipse.swt.events.SelectionListener; import org.eclipse.swt.events.VerifyEvent; import org.eclipse.swt.events.VerifyListener; import org.eclipse.swt.graphics.Image; import org.eclipse.swt.layout.GridData; import org.eclipse.swt.layout.GridLayout; import org.eclipse.swt.widgets.*; import org.eclipse.ui.PlatformUI; import org.eclipse.ui.help.IWorkbenchHelpSystem; import org.eclipse.jface.dialogs.DialogSettings; import org.eclipse.jface.wizard.Wizard; import edu.harvard.i2b2.eclipse.UserInfoBean; import edu.harvard.i2b2.eclipse.plugins.ontology.util.*; import edu.harvard.i2b2.eclipse.plugins.ontology.ws.OntServiceDriver; import edu.harvard.i2b2.eclipse.plugins.ontology.ws.OntologyResponseMessage; import edu.harvard.i2b2.ontclient.datavo.i2b2message.StatusType; import edu.harvard.i2b2.ontclient.datavo.vdo.ConceptType; import edu.harvard.i2b2.ontclient.datavo.vdo.ConceptsType; import edu.harvard.i2b2.ontclient.datavo.vdo.GetTermInfoType; /* * */ public class ItemWizard extends Wizard { private static final Log log = LogFactory.getLog(ItemWizard.class); private boolean okToFinish = false; public ItemWizard() { // this enables a square, plain help button // setHelpAvailable(true); setWindowTitle(Messages.getString("ItemWizard.WindowTitle")); //$NON-NLS-1$ setNeedsProgressMonitor(false); //setDefaultPageImageDescriptor(ImageDescriptor.createFromFile(null, "icons/import.gif")); //$NON-NLS-1$ DialogSettings dialogSettings = new DialogSettings("userInfo"); //$NON-NLS-1$ setDialogSettings(dialogSettings); } /* (non-Javadoc) * @see org.eclipse.jface.wizard.IWizard#addPages() */ @Override public void addPages() { addPage(new ItemSettingsPage()); addPage(new SynonymsPage()); addPage(new QueryDimensionSettingsPage()); // addPage(new ValueMetadataSettingsPageOne()); // keyword entry no longer used addPage(new ValueMetadataSettingsPageTwo()); //datatype addPage(new ValueMetadataSettingsPageThree()); // enum addPage(new ValueMetadataSettingsPageFour()); // ranges addPage(new ValueMetadataSettingsPageFive()); // units addPage(new VerifyDataPage()); } @Override public IWizardPage getNextPage(IWizardPage page) { if (page instanceof ItemSettingsPage) { ((ItemSettingsPage) page).updateMetadataRecord(); okToFinish = false; } else if (page instanceof QueryDimensionSettingsPage) { ((QueryDimensionSettingsPage) page).updateMetadataRecord(); //skip remainder of pages if no value metadata is selected if (!(MetadataRecord.getInstance().isValueMetadataFlag())) { page = getPage(ValueMetadataSettingsPageFive.PAGE_NAME); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); okToFinish = verifyPage.updateParameters(); if (okToFinish) okToFinish = page.isPageComplete(); } /// skip Page One if this is a LAB /* else if((MetadataRecord.getInstance().getMetadata().getValuetypeCd().equals("LAB"))){ page = getPage(ValueMetadataSettingsPageOne.PAGE_NAME); } */ } else if (page instanceof ValueMetadataSettingsPageThree) { ((ValueMetadataSettingsPageThree) page).updateValueMetadata(); page = getPage(ValueMetadataSettingsPageFive.PAGE_NAME); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); okToFinish = verifyPage.updateParameters(); if (okToFinish) okToFinish = page.isPageComplete(); } else if (page instanceof ValueMetadataSettingsPageFour) { ((ValueMetadataSettingsPageFour) page).updateValueMetadata(); } else if (page instanceof ValueMetadataSettingsPageFive) { ((ValueMetadataSettingsPageFive) page).updateValueMetadata(); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); okToFinish = verifyPage.updateParameters(); if (okToFinish) okToFinish = page.isPageComplete(); } /* else if (page instanceof ValueMetadataSettingsPageOne) { ((ValueMetadataSettingsPageOne) page).updateValueMetadata(); // semantic type is KEY (not LAB) so skip the next 4 pages page = getPage(ValueMetadataSettingsPageFive.PAGE_NAME); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); okToFinish = verifyPage.updateParameters(); if(okToFinish) okToFinish = page.isPageComplete(); } */ else if (page instanceof ValueMetadataSettingsPageTwo) { ((ValueMetadataSettingsPageTwo) page).updateValueMetadata(); // ValueMetadata vm = ValueMetadata.getInstance(); // if page is enum type -- continue to page 3. if ((ValueMetadata.getInstance().isNumericType())) { page = getPage(ValueMetadataSettingsPageThree.PAGE_NAME); okToFinish = false; } else if ((ValueMetadata.getInstance().isStringType()) || !ValueMetadata.getInstance().isEnumType()) { page = getPage(ValueMetadataSettingsPageFive.PAGE_NAME); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); okToFinish = verifyPage.updateParameters(); if (okToFinish) okToFinish = page.isPageComplete(); } } return super.getNextPage(page); } @Override public boolean canFinish() { //controls appearance of 'Finish' button return okToFinish; } /* (non-Javadoc) * @see org.eclipse.jface.wizard.IWizard#performFinish() */ @Override public boolean performFinish() { if (!(Roles.getInstance().isRoleValid())) { MessageBox mBox = new MessageBox(Display.getCurrent().getActiveShell(), SWT.ICON_WARNING | SWT.OK); mBox.setText("New Item Warning"); mBox.setMessage(Messages.getString("EditView.MinRoleNeeded2")); int result = mBox.open(); okToFinish = false; return false; } // this handles case where we hit back button and then tried to finish. IWizardPage page = getContainer().getCurrentPage(); if (page.isPageComplete() == false) { okToFinish = false; return false; } if (page instanceof ItemSettingsPage) { ((ItemSettingsPage) page).updateMetadataRecord(); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); if (!verifyPage.updateParameters()) return false; } else if (page instanceof QueryDimensionSettingsPage) { ((QueryDimensionSettingsPage) page).updateMetadataRecord(); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); if (!verifyPage.updateParameters()) return false; } /* else if (page instanceof ValueMetadataSettingsPageOne) { ((ValueMetadataSettingsPageOne) page).updateValueMetadata(); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); if(!verifyPage.updateParameters()) return false; } */ else if (page instanceof ValueMetadataSettingsPageTwo) { ((ValueMetadataSettingsPageTwo) page).updateValueMetadata(); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); if (!verifyPage.updateParameters()) return false; } else if (page instanceof ValueMetadataSettingsPageThree) { ((ValueMetadataSettingsPageThree) page).updateValueMetadata(); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); if (!verifyPage.updateParameters()) return false; } else if (page instanceof ValueMetadataSettingsPageFour) { ((ValueMetadataSettingsPageFour) page).updateValueMetadata(); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); if (!verifyPage.updateParameters()) return false; } else if (page instanceof ValueMetadataSettingsPageFive) { ((ValueMetadataSettingsPageFive) page).updateValueMetadata(); VerifyDataPage verifyPage = (VerifyDataPage) getPage(VerifyDataPage.PAGE_NAME); if (!verifyPage.updateParameters()) return false; } if (validate()) { addChild().start(); ValueMetadata.getInstance().clear(); return true; } else return false; } /* (non-Javadoc) * @see org.eclipse.jface.wizard.IWizard#performCancel() */ @Override public boolean performCancel() { MessageBox mb = new MessageBox(getShell(), SWT.ICON_QUESTION | SWT.YES | SWT.NO); mb.setMessage(Messages.getString("Wizard.CancelPopupText")); mb.setText(Messages.getString("Wizard.CancelPopupTitle")); int ans = mb.open(); if (ans == SWT.YES) return true; else return false; } public Thread addChild() { final Display theDisplay = Display.getCurrent(); return new Thread() { @Override public void run() { try { ConceptType node = MetadataRecord.getInstance().getMetadata(); add(theDisplay, node); List<String> synonyms = MetadataRecord.getInstance().getSynonyms(); Iterator it = synonyms.iterator(); while (it.hasNext()) { String synName = (String) it.next(); node.setName(synName); node.setSynonymCd("Y"); add(theDisplay, node); } } catch (Exception e) { log.error("Add child error"); } theDisplay.syncExec(new Runnable() { public void run() { MetadataRecord.getInstance().getBrowser().update(); MetadataRecord.getInstance().getSyncAction().setImageDescriptor( ImageDescriptor.createFromFile(EditView.class, "/icons/red_database_refresh.png")); } }); } }; } public boolean validate() { boolean valid = false; try { OntologyResponseMessage msg = new OntologyResponseMessage(); StatusType procStatus = null; while (procStatus == null || !procStatus.getType().equals("DONE")) { GetTermInfoType termInfo = new GetTermInfoType(); termInfo.setSelf(MetadataRecord.getInstance().getMetadata().getKey()); termInfo.setBlob(false); termInfo.setSynonyms(false); termInfo.setHiddens(false); termInfo.setType("default"); String response = OntServiceDriver.getTermInfo(termInfo, "EDIT"); procStatus = msg.processResult(response); // else if other error codes // TABLE_ACCESS_DENIED and USER_INVALID and DATABASE ERRORS if (procStatus.getType().equals("ERROR")) { // e.getMessage() == Incoming message input stream is null -- for the case of connection down. MessageBox mBox = new MessageBox(Display.getCurrent().getActiveShell(), SWT.ICON_INFORMATION | SWT.OK); mBox.setText("Please Note ..."); mBox.setMessage("Unable to make a connection to the remote server\n" + "This is often a network error, please try again"); int result = mBox.open(); log.error(procStatus.getValue()); return false; } // check response ConceptsType concepts = msg.doReadConcepts(); // then do submit if response is empty (means term is unique) valid = concepts.getConcept().isEmpty(); if (!valid) { MessageBox mBox = new MessageBox(Display.getCurrent().getActiveShell(), SWT.ICON_INFORMATION | SWT.OK); mBox.setText("Please Note ..."); mBox.setMessage("The path name you created for this item is not unique \n" + "Please modify the symbol name on the first page and try again"); int result = mBox.open(); } } } catch (AxisFault e) { log.error("Unable to make a connection to the remote server\n" + "This is often a network error, please try again"); // e.getMessage() == Incoming message input stream is null -- for the case of connection down. MessageBox mBox = new MessageBox(Display.getCurrent().getActiveShell(), SWT.ICON_INFORMATION | SWT.OK); mBox.setText("Please Note ..."); mBox.setMessage("Unable to make a connection to the remote server\n" + "This is often a network error, please try again"); int result = mBox.open(); } catch (Exception e) { log.error( "Error message delivered from the remote server\n" + "You may wish to retry your last action"); // e.getMessage() == Incoming message input stream is null -- for the case of connection down. MessageBox mBox = new MessageBox(Display.getCurrent().getActiveShell(), SWT.ICON_INFORMATION | SWT.OK); mBox.setText("Please Note ..."); mBox.setMessage("Unable to make a connection to the remote server\n" + "This is often a network error, please try again"); int result = mBox.open(); } return valid; } public void add(final Display theDisplay, ConceptType node) { try { OntologyResponseMessage msg = new OntologyResponseMessage(); StatusType procStatus = null; while (procStatus == null || !procStatus.getType().equals("DONE")) { String response = OntServiceDriver.addChild(node); procStatus = msg.processResult(response); if (procStatus.getType().equals("ERROR")) { theDisplay.syncExec(new Runnable() { public void run() { // e.getMessage() == Incoming message input stream is null -- for the case of connection down. MessageBox mBox = new MessageBox(theDisplay.getActiveShell(), SWT.ICON_INFORMATION | SWT.OK); mBox.setText("Please Note ..."); mBox.setMessage("Unable to make a connection to the remote server\n" + "This is often a network error, please try again"); int result = mBox.open(); } }); log.error(procStatus.getValue()); return; } } } catch (AxisFault e) { log.error("Unable to make a connection to the remote server\n" + "This is often a network error, please try again"); theDisplay.syncExec(new Runnable() { public void run() { // e.getMessage() == Incoming message input stream is null -- for the case of connection down. MessageBox mBox = new MessageBox(Display.getCurrent().getActiveShell(), SWT.ICON_INFORMATION | SWT.OK); mBox.setText("Please Note ..."); mBox.setMessage("Unable to make a connection to the remote server\n" + "This is often a network error, please try again"); int result = mBox.open(); } }); } catch (Exception e) { log.error( "Error message delivered from the remote server\n" + "You may wish to retry your last action"); theDisplay.syncExec(new Runnable() { public void run() { // e.getMessage() == Incoming message input stream is null -- for the case of connection down. MessageBox mBox = new MessageBox(Display.getCurrent().getActiveShell(), SWT.ICON_INFORMATION | SWT.OK); mBox.setText("Please Note ..."); mBox.setMessage("Unable to make a connection to the remote server\n" + "This is often a network error, please try again"); int result = mBox.open(); } }); } } } class ItemSettingsPage extends WizardPage { private Text text1, text2, text3, text4, text6, text5; private String schemesKey = ""; private Combo valTypeCombo; private Button enterValues; public static final String PAGE_NAME = "ItemSettings"; //$NON-NLS-1$ public ItemSettingsPage() { super(PAGE_NAME); setTitle(Messages.getString("ItemWizard.ItemSettings"));// + "\n\n" + notice); setPageComplete(false); } /* (non-Javadoc) * @see org.eclipse.jface.dialogs.IDialogPage#createControl(org.eclipse.swt.widgets.Composite) */ public void createControl(Composite parent) { Composite itemSettings = new Composite(parent, SWT.NONE); GridLayout gridLayout = new GridLayout(); gridLayout.numColumns = 2; gridLayout.horizontalSpacing = 1; gridLayout.verticalSpacing = 1; gridLayout.marginHeight = 0; gridLayout.marginWidth = 5; itemSettings.setLayout(gridLayout); new Label(itemSettings, SWT.NONE); new Label(itemSettings, SWT.NONE); //Parent info ImageDescriptor imageDescriptorFolder = ImageDescriptor.createFromFile(getClass(), "icons/closedFolder.jpg"); ImageDescriptor imageDescriptorContainer = ImageDescriptor.createFromFile(getClass(), "icons/closedCase.jpg"); Image image = null; if (MetadataRecord.getInstance().getParentData().getVisualattributes().startsWith("F")) image = imageDescriptorFolder.createImage(); else if (MetadataRecord.getInstance().getParentData().getVisualattributes().startsWith("C")) image = imageDescriptorContainer.createImage(); new Label(itemSettings, SWT.NONE).setText("The parent will be: "); Composite parentInfo = new Composite(itemSettings, SWT.NONE); parentInfo.setLayout(gridLayout); new Label(parentInfo, SWT.NONE).setImage(image); new Label(parentInfo, SWT.NONE).setText(" " + MetadataRecord.getInstance().getParentData().getName()); new Label(itemSettings, SWT.NONE).setText("The path will be: "); new Label(itemSettings, SWT.NONE) .setText(StringUtil.getPath(MetadataRecord.getInstance().getParentData().getFullName())); new Label(itemSettings, SWT.NONE); new Label(itemSettings, SWT.NONE); new Label(itemSettings, SWT.NONE).setText("*Item Name:"); text1 = new Text(itemSettings, SWT.BORDER); text1.setToolTipText("The Item Name is the name that appears in the navigate tree."); GridData textData = new GridData(); textData.widthHint = 250; textData.grabExcessHorizontalSpace = true; textData.horizontalAlignment = SWT.FILL; text1.setLayoutData(textData); text1.addModifyListener(new ModifyListener() { public void modifyText(ModifyEvent event) { // update tooltip and symbol name as name is entered String name = text1.getText(); text5.setText(MetadataRecord.getInstance().getParentData().getTooltip() + " \\ " + name); if (name.length() > 33) name = name.substring(0, 33) + "~"; text6.setText(name); // Page is not complete until a name, concept and symbol name have been added if ((text1.getText().length() > 0) && (text2.getText().length() > 0) && (text6.getText().length() > 0)) setPageComplete(true); else setPageComplete(false); } }); text1.addVerifyListener(new VerifyListener() { public void verifyText(VerifyEvent e) { if ((e.character == '\b') || (e.character == '\u007F')) { e.doit = true; return; } // dont allow certain characters. if (invalid(e.character)) e.doit = false; if (text1.getText().length() > 1999) e.doit = false; } }); new Label(itemSettings, SWT.NONE).setText("Tooltip:"); text5 = new Text(itemSettings, SWT.BORDER); text5.setToolTipText("The Tooltip is the tooltip that appears in the navigate tree."); text5.setLayoutData(textData); String tooltip = MetadataRecord.getInstance().getParentData().getTooltip(); // Limit length of tool tip to 255 chars if (tooltip.length() > 254) tooltip = tooltip.substring(0, 254); text5.setText(tooltip); text5.addVerifyListener(new VerifyListener() { public void verifyText(VerifyEvent e) { if ((e.character == '\b') || (e.character == '\u007F')) { e.doit = true; return; } if (text5.getText().length() > 254) e.doit = false; } }); new Label(itemSettings, SWT.NONE).setText("*Base code:"); Composite conceptCodeComp = new Composite(itemSettings, SWT.NONE); GridLayout grid2 = new GridLayout(); grid2.numColumns = 2; grid2.horizontalSpacing = 1; grid2.verticalSpacing = 1; grid2.marginHeight = 0; grid2.marginWidth = 0; conceptCodeComp.setLayout(grid2); GridData data = new GridData(); data.horizontalSpan = 1; data.horizontalAlignment = SWT.FILL; conceptCodeComp.setLayoutData(data); final Combo schemesCombo = new Combo(conceptCodeComp, SWT.READ_ONLY); schemesCombo.setToolTipText("Select a prefix for the base code (may be empty)."); List<ConceptType> schemes = SchemesUtil.getInstance().getSchemes(); if (schemes != null) { Iterator<ConceptType> schemesIterator = schemes.iterator(); while (schemesIterator.hasNext()) { ConceptType scheme = (ConceptType) schemesIterator.next(); String name = scheme.getName(); schemesCombo.add(name); } } text2 = new Text(conceptCodeComp, SWT.BORDER); text2.setToolTipText("Base codes (concept codes, provider codes) identify terms for queries."); GridData data2 = new GridData(); data2.widthHint = 135; data2.grabExcessHorizontalSpace = true; data2.horizontalAlignment = SWT.FILL; text2.setLayoutData(data2); text2.addModifyListener(new ModifyListener() { public void modifyText(ModifyEvent event) { // Page is not complete until a name, concept and symbol name have been added if ((text1.getText().length() > 0) && (text2.getText().length() > 0) && (text6.getText().length() > 0)) setPageComplete(true); else setPageComplete(false); } }); text2.addVerifyListener(new VerifyListener() { public void verifyText(VerifyEvent e) { if ((e.character == '\b') || (e.character == '\u007F')) { e.doit = true; return; } if (schemesKey.length() + text2.getText().length() > 49) e.doit = false; } }); schemesCombo.addSelectionListener(new SelectionListener() { public void widgetSelected(SelectionEvent e) { // Item in list has been selected if (schemesCombo.getSelectionIndex() == 0) schemesKey = ""; else { ConceptType concept = (ConceptType) SchemesUtil.getInstance().getSchemes() .get(schemesCombo.getSelectionIndex()); schemesKey = concept.getKey(); } } public void widgetDefaultSelected(SelectionEvent e) { // this is not an option (text cant be entered) } }); new Label(itemSettings, SWT.NONE).setText("*Symbol Name:"); text6 = new Text(itemSettings, SWT.BORDER); text6.setToolTipText("The symbol name is appended to the path to create the full path name"); text6.setLayoutData(textData); text6.addModifyListener(new ModifyListener() { public void modifyText(ModifyEvent event) { // Page is not complete until a name, concept and symbol name have been added if ((text1.getText().length() > 0) && (text2.getText().length() > 0) && (text6.getText().length() > 0)) setPageComplete(true); else setPageComplete(false); } }); text6.addVerifyListener(new VerifyListener() { public void verifyText(VerifyEvent e) { if ((e.character == '\b') || (e.character == '\u007F')) { e.doit = true; return; } // dont allow certain characters. if (invalid(e.character)) e.doit = false; if (text6.getText().length() > 33) e.doit = false; } }); new Label(itemSettings, SWT.NONE).setText("Sourcesystem code:"); text3 = new Text(itemSettings, SWT.BORDER); text3.setToolTipText("A Sourcesystem code describes the system the data was derived from."); text3.setLayoutData(textData); text3.setText(UserInfoBean.getInstance().getUserName() + "_manualentry"); text3.addVerifyListener(new VerifyListener() { public void verifyText(VerifyEvent e) { if ((e.character == '\b') || (e.character == '\u007F')) { e.doit = true; return; } if (text3.getText().length() > 49) e.doit = false; } }); new Label(itemSettings, SWT.NONE).setText("Comment:"); text4 = new Text(itemSettings, SWT.BORDER); text4.setToolTipText("Miscellaneous (optional) comments may be entered here."); text4.setLayoutData(textData); text4.addVerifyListener(new VerifyListener() { public void verifyText(VerifyEvent e) { if ((e.character == '\b') || (e.character == '\u007F')) { e.doit = true; return; } if (text4.getText().length() > 1999) e.doit = false; } }); new Label(itemSettings, SWT.NONE).setText("Semantic type:"); Composite semanticComp = new Composite(itemSettings, SWT.NONE); GridLayout grid3 = new GridLayout(); grid2.numColumns = 3; grid2.horizontalSpacing = 1; grid2.verticalSpacing = 1; grid2.marginHeight = 0; grid2.marginWidth = 0; semanticComp.setLayout(grid2); semanticComp.setLayoutData(data); valTypeCombo = new Combo(semanticComp, SWT.READ_ONLY); valTypeCombo.setToolTipText("'DOC'== a document or note; 'LAB' == lab results"); valTypeCombo.add(""); valTypeCombo.add("DOC"); valTypeCombo.add("LAB"); valTypeCombo.setText(""); valTypeCombo.addSelectionListener(new SelectionListener() { public void widgetSelected(SelectionEvent e) { if (valTypeCombo.getText().equals("LAB")) { enterValues.setSelection(true); } } public void widgetDefaultSelected(SelectionEvent e) { // this is not an option (text cant be entered) } }); new Label(semanticComp, SWT.NONE).setText(" "); enterValues = new Button(semanticComp, SWT.CHECK); enterValues.setText("Enter Value Information"); new Label(itemSettings, SWT.NONE); new Label(itemSettings, SWT.NONE); new Label(itemSettings, SWT.NONE).setText("* denotes required field."); setControl(itemSettings); } @Override public void performHelp() { String PREFIX = "edu.harvard.i2b2.eclipse.plugins.ontology"; String EDIT_VIEW_CONTEXT_ID = PREFIX + ".edit_terms_view_help_wizard_item"; final IWorkbenchHelpSystem helpSystem = PlatformUI.getWorkbench().getHelpSystem(); helpSystem.displayHelp(EDIT_VIEW_CONTEXT_ID); // to show "big" help page: // helpSystem.displayHelpResource("/edu.harvard.i2b2.eclipse.plugins.ontology/html/i2b2_edit_terms_index.htm"); } public void updateMetadataRecord() { MetadataRecord.getInstance().getMetadata().setName(getName()); MetadataRecord.getInstance().getMetadata().setBasecode(getConceptCode()); MetadataRecord.getInstance().getMetadata().setSourcesystemCd(getSourcesystemCode()); MetadataRecord.getInstance().getMetadata().setComment(getComment()); MetadataRecord.getInstance().setSymbol(getSymbol()); MetadataRecord.getInstance().getMetadata().setValuetypeCd(getValuetypeCd()); MetadataRecord.getInstance().getMetadata().setTooltip(getTooltip()); MetadataRecord.getInstance().getMetadata().setKey(MetadataRecord.getInstance().getParentData().getKey() + MetadataRecord.getInstance().getSymbol() + "\\"); MetadataRecord.getInstance().getMetadata() .setDimcode(MetadataRecord.getInstance().getParentData().getDimcode() + MetadataRecord.getInstance().getSymbol() + "\\"); MetadataRecord.getInstance().setValueMetadataFlag(enterValues.getSelection()); } @Override public String getName() { return text1.getText(); } public String getConceptCode() { String code = text2.getText(); if (!((code == null) || (code.length() == 0))) { String prefix = schemesKey; if (!((prefix == null) || (prefix.length() == 0))) return prefix + code; else return code; } else return ""; } public String getSourcesystemCode() { return text3.getText(); } public String getSymbol() { return text6.getText(); } public String getComment() { return text4.getText(); } public String getValuetypeCd() { return valTypeCombo.getText(); } public String getTooltip() { return text5.getText(); } private boolean invalid(char c) { if ((c == '*') || (c == '|') || (c == '/') || (c == '\\') || (c == '"') || (c == '<') || (c == '%') || (c == '?')) { // the characters ':' and '>' are now allowed (genomic data uses them) MessageBox mBox = new MessageBox(Display.getCurrent().getActiveShell(), SWT.ICON_INFORMATION | SWT.OK); mBox.setText("Please Note ..."); mBox.setMessage("The following characters are not allowed for this field \n" + " * | \\ / \" < ? %"); int result = mBox.open(); return true; } else return false; } }