net.openchrom.chromatogram.xxd.process.supplier.alignment.ui.internal.runnable.CalculateAlignmentRunnable.java Source code

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Here is the source code for net.openchrom.chromatogram.xxd.process.supplier.alignment.ui.internal.runnable.CalculateAlignmentRunnable.java

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/*******************************************************************************
 * Copyright (c) 2016, 2017 Lablicate GmbH.
 *
 * All rights reserved. This program and the accompanying materials
 * are made available under the terms of the Eclipse Public License v1.0
 * which accompanies this distribution, and is available at
 * http://www.eclipse.org/legal/epl-v10.html
 * 
 * Contributors:
 * Dr. Philip Wenig - initial API and implementation
 *******************************************************************************/
package net.openchrom.chromatogram.xxd.process.supplier.alignment.ui.internal.runnable;

import java.lang.reflect.InvocationTargetException;
import java.util.List;

import org.eclipse.core.runtime.IProgressMonitor;
import org.eclipse.jface.operation.IRunnableWithProgress;

import net.openchrom.chromatogram.xxd.process.supplier.alignment.core.AlignmentProcessor;
import net.openchrom.chromatogram.xxd.process.supplier.alignment.model.AlignmentResults;
import net.openchrom.chromatogram.xxd.process.supplier.alignment.model.IAlignmentResults;
import net.openchrom.chromatogram.xxd.process.supplier.alignment.model.IDataInputEntry;
import net.openchrom.chromatogram.xxd.process.supplier.alignment.settings.IAlignmentSettings;

public class CalculateAlignmentRunnable implements IRunnableWithProgress {

    private List<IDataInputEntry> dataInputEntries;
    private AlignmentResults alignmentResults;
    private IAlignmentSettings alignmentSettings;

    public CalculateAlignmentRunnable(List<IDataInputEntry> dataInputEntries,
            IAlignmentSettings alignmentSettings) {
        this.dataInputEntries = dataInputEntries;
        this.alignmentSettings = alignmentSettings;
    }

    @Override
    public void run(IProgressMonitor monitor) throws InvocationTargetException, InterruptedException {

        AlignmentProcessor alignmentProcessor = new AlignmentProcessor();
        alignmentResults = alignmentProcessor.calculateAlignment(dataInputEntries, alignmentSettings, monitor);
    }

    public AlignmentResults getAlignmentResults() {

        return alignmentResults;
    }
}