org.eclipse.jgit.transport.UploadPack.java Source code

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/*
 * Copyright (C) 2008-2010, Google Inc.
 * and other copyright owners as documented in the project's IP log.
 *
 * This program and the accompanying materials are made available
 * under the terms of the Eclipse Distribution License v1.0 which
 * accompanies this distribution, is reproduced below, and is
 * available at http://www.eclipse.org/org/documents/edl-v10.php
 *
 * All rights reserved.
 *
 * Redistribution and use in source and binary forms, with or
 * without modification, are permitted provided that the following
 * conditions are met:
 *
 * - Redistributions of source code must retain the above copyright
 *   notice, this list of conditions and the following disclaimer.
 *
 * - Redistributions in binary form must reproduce the above
 *   copyright notice, this list of conditions and the following
 *   disclaimer in the documentation and/or other materials provided
 *   with the distribution.
 *
 * - Neither the name of the Eclipse Foundation, Inc. nor the
 *   names of its contributors may be used to endorse or promote
 *   products derived from this software without specific prior
 *   written permission.
 *
 * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND
 * CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES,
 * INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES
 * OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
 * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR
 * CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
 * SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT
 * NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
 * LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
 * CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT,
 * STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE)
 * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
 * ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
 */

package org.eclipse.jgit.transport;

import static java.util.Collections.unmodifiableMap;
import static java.util.Objects.requireNonNull;
import static org.eclipse.jgit.lib.Constants.R_TAGS;
import static org.eclipse.jgit.transport.GitProtocolConstants.CAPABILITY_REF_IN_WANT;
import static org.eclipse.jgit.transport.GitProtocolConstants.CAPABILITY_SERVER_OPTION;
import static org.eclipse.jgit.transport.GitProtocolConstants.COMMAND_FETCH;
import static org.eclipse.jgit.transport.GitProtocolConstants.COMMAND_LS_REFS;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_AGENT;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_ALLOW_REACHABLE_SHA1_IN_WANT;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_ALLOW_TIP_SHA1_IN_WANT;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_DEEPEN_RELATIVE;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_FILTER;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_INCLUDE_TAG;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_MULTI_ACK;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_MULTI_ACK_DETAILED;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_NO_DONE;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_NO_PROGRESS;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_OFS_DELTA;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_SHALLOW;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_SIDEBAND_ALL;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_SIDE_BAND;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_SIDE_BAND_64K;
import static org.eclipse.jgit.transport.GitProtocolConstants.OPTION_THIN_PACK;
import static org.eclipse.jgit.util.RefMap.toRefMap;

import java.io.ByteArrayOutputStream;
import java.io.EOFException;
import java.io.IOException;
import java.io.InputStream;
import java.io.OutputStream;
import java.io.UncheckedIOException;
import java.text.MessageFormat;
import java.util.ArrayList;
import java.util.Collection;
import java.util.Collections;
import java.util.HashSet;
import java.util.List;
import java.util.Map;
import java.util.Objects;
import java.util.Optional;
import java.util.Set;
import java.util.TreeMap;
import java.util.function.Predicate;
import java.util.stream.Collectors;
import java.util.stream.Stream;

import org.eclipse.jgit.annotations.NonNull;
import org.eclipse.jgit.annotations.Nullable;
import org.eclipse.jgit.errors.CorruptObjectException;
import org.eclipse.jgit.errors.IncorrectObjectTypeException;
import org.eclipse.jgit.errors.MissingObjectException;
import org.eclipse.jgit.errors.PackProtocolException;
import org.eclipse.jgit.internal.JGitText;
import org.eclipse.jgit.internal.storage.pack.CachedPackUriProvider;
import org.eclipse.jgit.internal.storage.pack.PackWriter;
import org.eclipse.jgit.internal.transport.parser.FirstWant;
import org.eclipse.jgit.lib.BitmapIndex;
import org.eclipse.jgit.lib.BitmapIndex.BitmapBuilder;
import org.eclipse.jgit.lib.Constants;
import org.eclipse.jgit.lib.NullProgressMonitor;
import org.eclipse.jgit.lib.ObjectId;
import org.eclipse.jgit.lib.ObjectReader;
import org.eclipse.jgit.lib.ProgressMonitor;
import org.eclipse.jgit.lib.Ref;
import org.eclipse.jgit.lib.RefDatabase;
import org.eclipse.jgit.lib.Repository;
import org.eclipse.jgit.revwalk.AsyncRevObjectQueue;
import org.eclipse.jgit.revwalk.BitmapWalker;
import org.eclipse.jgit.revwalk.DepthWalk;
import org.eclipse.jgit.revwalk.ObjectWalk;
import org.eclipse.jgit.revwalk.ReachabilityChecker;
import org.eclipse.jgit.revwalk.RevCommit;
import org.eclipse.jgit.revwalk.RevFlag;
import org.eclipse.jgit.revwalk.RevFlagSet;
import org.eclipse.jgit.revwalk.RevObject;
import org.eclipse.jgit.revwalk.RevSort;
import org.eclipse.jgit.revwalk.RevTag;
import org.eclipse.jgit.revwalk.RevWalk;
import org.eclipse.jgit.revwalk.filter.CommitTimeRevFilter;
import org.eclipse.jgit.storage.pack.PackConfig;
import org.eclipse.jgit.storage.pack.PackStatistics;
import org.eclipse.jgit.transport.GitProtocolConstants.MultiAck;
import org.eclipse.jgit.transport.RefAdvertiser.PacketLineOutRefAdvertiser;
import org.eclipse.jgit.transport.TransferConfig.ProtocolVersion;
import org.eclipse.jgit.util.io.InterruptTimer;
import org.eclipse.jgit.util.io.NullOutputStream;
import org.eclipse.jgit.util.io.TimeoutInputStream;
import org.eclipse.jgit.util.io.TimeoutOutputStream;

/**
 * Implements the server side of a fetch connection, transmitting objects.
 */
public class UploadPack {
    /** Policy the server uses to validate client requests */
    public static enum RequestPolicy {
        /** Client may only ask for objects the server advertised a reference for. */
        ADVERTISED,

        /**
         * Client may ask for any commit reachable from a reference advertised by
         * the server.
         */
        REACHABLE_COMMIT,

        /**
         * Client may ask for objects that are the tip of any reference, even if not
         * advertised.
         * <p>
         * This may happen, for example, when a custom {@link RefFilter} is set.
         *
         * @since 3.1
         */
        TIP,

        /**
         * Client may ask for any commit reachable from any reference, even if that
         * reference wasn't advertised.
         *
         * @since 3.1
         */
        REACHABLE_COMMIT_TIP,

        /** Client may ask for any SHA-1 in the repository. */
        ANY;
    }

    /**
     * Validator for client requests.
     *
     * @since 3.1
     */
    public interface RequestValidator {
        /**
         * Check a list of client wants against the request policy.
         *
         * @param up
         *            {@link UploadPack} instance.
         * @param wants
         *            objects the client requested that were not advertised.
         *
         * @throws PackProtocolException
         *            if one or more wants is not valid.
         * @throws IOException
         *            if a low-level exception occurred.
         * @since 3.1
         */
        void checkWants(UploadPack up, List<ObjectId> wants) throws PackProtocolException, IOException;
    }

    /**
     * Data in the first line of a want-list, the line itself plus options.
     *
     * @deprecated Use {@link FirstWant} instead
     */
    @Deprecated
    public static class FirstLine {

        private final FirstWant firstWant;

        /**
         * @param line
         *            line from the client.
         */
        public FirstLine(String line) {
            try {
                firstWant = FirstWant.fromLine(line);
            } catch (PackProtocolException e) {
                throw new UncheckedIOException(e);
            }
        }

        /** @return non-capabilities part of the line. */
        public String getLine() {
            return firstWant.getLine();
        }

        /** @return capabilities parsed from the line. */
        public Set<String> getOptions() {
            if (firstWant.getAgent() != null) {
                Set<String> caps = new HashSet<>(firstWant.getCapabilities());
                caps.add(OPTION_AGENT + '=' + firstWant.getAgent());
                return caps;
            }
            return firstWant.getCapabilities();
        }
    }

    /*
     * {@link java.util.function.Consumer} doesn't allow throwing checked
     * exceptions. Define our own to propagate IOExceptions.
     */
    @FunctionalInterface
    private static interface IOConsumer<R> {
        void accept(R t) throws IOException;
    }

    /** Database we read the objects from. */
    private final Repository db;

    /** Revision traversal support over {@link #db}. */
    private final RevWalk walk;

    /** Configuration to pass into the PackWriter. */
    private PackConfig packConfig;

    /** Configuration for various transfer options. */
    private TransferConfig transferConfig;

    /** Timeout in seconds to wait for client interaction. */
    private int timeout;

    /**
     * Is the client connection a bi-directional socket or pipe?
     * <p>
     * If true, this class assumes it can perform multiple read and write cycles
     * with the client over the input and output streams. This matches the
     * functionality available with a standard TCP/IP connection, or a local
     * operating system or in-memory pipe.
     * <p>
     * If false, this class runs in a read everything then output results mode,
     * making it suitable for single round-trip systems RPCs such as HTTP.
     */
    private boolean biDirectionalPipe = true;

    /** Timer to manage {@link #timeout}. */
    private InterruptTimer timer;

    /**
     * Whether the client requested to use protocol V2 through a side
     * channel (such as the Git-Protocol HTTP header).
     */
    private boolean clientRequestedV2;

    private InputStream rawIn;

    private ResponseBufferedOutputStream rawOut;

    private PacketLineIn pckIn;

    private OutputStream msgOut = NullOutputStream.INSTANCE;

    private ErrorWriter errOut = new PackProtocolErrorWriter();

    /**
     * Refs eligible for advertising to the client, set using
     * {@link #setAdvertisedRefs}.
     */
    private Map<String, Ref> refs;

    /** Hook used while processing Git protocol v2 requests. */
    private ProtocolV2Hook protocolV2Hook = ProtocolV2Hook.DEFAULT;

    /** Hook used while advertising the refs to the client. */
    private AdvertiseRefsHook advertiseRefsHook = AdvertiseRefsHook.DEFAULT;

    /** Whether the {@link #advertiseRefsHook} has been invoked. */
    private boolean advertiseRefsHookCalled;

    /** Filter used while advertising the refs to the client. */
    private RefFilter refFilter = RefFilter.DEFAULT;

    /** Hook handling the various upload phases. */
    private PreUploadHook preUploadHook = PreUploadHook.NULL;

    /** Hook for taking post upload actions. */
    private PostUploadHook postUploadHook = PostUploadHook.NULL;

    /** Caller user agent */
    String userAgent;

    /** Raw ObjectIds the client has asked for, before validating them. */
    private Set<ObjectId> wantIds = new HashSet<>();

    /** Objects the client wants to obtain. */
    private final Set<RevObject> wantAll = new HashSet<>();

    /** Objects on both sides, these don't have to be sent. */
    private final Set<RevObject> commonBase = new HashSet<>();

    /** Commit time of the oldest common commit, in seconds. */
    private int oldestTime;

    /** null if {@link #commonBase} should be examined again. */
    private Boolean okToGiveUp;

    private boolean sentReady;

    /** Objects we sent in our advertisement list, clients can ask for these. */
    private Set<ObjectId> advertised;

    /** Marked on objects the client has asked us to give them. */
    private final RevFlag WANT;

    /** Marked on objects both we and the client have. */
    private final RevFlag PEER_HAS;

    /** Marked on objects in {@link #commonBase}. */
    private final RevFlag COMMON;

    /** Objects where we found a path from the want list to a common base. */
    private final RevFlag SATISFIED;

    private final RevFlagSet SAVE;

    private RequestValidator requestValidator = new AdvertisedRequestValidator();

    private MultiAck multiAck = MultiAck.OFF;

    private boolean noDone;

    private PackStatistics statistics;

    /**
     * Request this instance is handling.
     *
     * We need to keep a reference to it for {@link PreUploadHook pre upload
     * hooks}. They receive a reference this instance and invoke methods like
     * getDepth() to get information about the request.
     */
    private FetchRequest currentRequest;

    private CachedPackUriProvider cachedPackUriProvider;

    /**
     * Create a new pack upload for an open repository.
     *
     * @param copyFrom
     *            the source repository.
     */
    public UploadPack(Repository copyFrom) {
        db = copyFrom;
        walk = new RevWalk(db);
        walk.setRetainBody(false);

        WANT = walk.newFlag("WANT"); //$NON-NLS-1$
        PEER_HAS = walk.newFlag("PEER_HAS"); //$NON-NLS-1$
        COMMON = walk.newFlag("COMMON"); //$NON-NLS-1$
        SATISFIED = walk.newFlag("SATISFIED"); //$NON-NLS-1$
        walk.carry(PEER_HAS);

        SAVE = new RevFlagSet();
        SAVE.add(WANT);
        SAVE.add(PEER_HAS);
        SAVE.add(COMMON);
        SAVE.add(SATISFIED);

        setTransferConfig(null);
    }

    /**
     * Get the repository this upload is reading from.
     *
     * @return the repository this upload is reading from.
     */
    public final Repository getRepository() {
        return db;
    }

    /**
     * Get the RevWalk instance used by this connection.
     *
     * @return the RevWalk instance used by this connection.
     */
    public final RevWalk getRevWalk() {
        return walk;
    }

    /**
     * Get refs which were advertised to the client.
     *
     * @return all refs which were advertised to the client, or null if
     *         {@link #setAdvertisedRefs(Map)} has not been called yet.
     */
    public final Map<String, Ref> getAdvertisedRefs() {
        return refs;
    }

    /**
     * Set the refs advertised by this UploadPack.
     * <p>
     * Intended to be called from a
     * {@link org.eclipse.jgit.transport.PreUploadHook}.
     *
     * @param allRefs
     *            explicit set of references to claim as advertised by this
     *            UploadPack instance. This overrides any references that may
     *            exist in the source repository. The map is passed to the
     *            configured {@link #getRefFilter()}. If null, assumes all refs
     *            were advertised.
     */
    public void setAdvertisedRefs(@Nullable Map<String, Ref> allRefs) {
        if (allRefs != null)
            refs = allRefs;
        else
            refs = db.getAllRefs();
        if (refFilter == RefFilter.DEFAULT)
            refs = transferConfig.getRefFilter().filter(refs);
        else
            refs = refFilter.filter(refs);
    }

    /**
     * Get timeout (in seconds) before aborting an IO operation.
     *
     * @return timeout (in seconds) before aborting an IO operation.
     */
    public int getTimeout() {
        return timeout;
    }

    /**
     * Set the timeout before willing to abort an IO call.
     *
     * @param seconds
     *            number of seconds to wait (with no data transfer occurring)
     *            before aborting an IO read or write operation with the
     *            connected client.
     */
    public void setTimeout(int seconds) {
        timeout = seconds;
    }

    /**
     * Whether this class expects a bi-directional pipe opened between the
     * client and itself.
     *
     * @return true if this class expects a bi-directional pipe opened between
     *         the client and itself. The default is true.
     */
    public boolean isBiDirectionalPipe() {
        return biDirectionalPipe;
    }

    /**
     * Set whether this class will assume the socket is a fully bidirectional
     * pipe between the two peers
     *
     * @param twoWay
     *            if true, this class will assume the socket is a fully
     *            bidirectional pipe between the two peers and takes advantage
     *            of that by first transmitting the known refs, then waiting to
     *            read commands. If false, this class assumes it must read the
     *            commands before writing output and does not perform the
     *            initial advertising.
     */
    public void setBiDirectionalPipe(boolean twoWay) {
        biDirectionalPipe = twoWay;
    }

    /**
     * Get policy used by the service to validate client requests
     *
     * @return policy used by the service to validate client requests, or null
     *         for a custom request validator.
     */
    public RequestPolicy getRequestPolicy() {
        if (requestValidator instanceof AdvertisedRequestValidator)
            return RequestPolicy.ADVERTISED;
        if (requestValidator instanceof ReachableCommitRequestValidator)
            return RequestPolicy.REACHABLE_COMMIT;
        if (requestValidator instanceof TipRequestValidator)
            return RequestPolicy.TIP;
        if (requestValidator instanceof ReachableCommitTipRequestValidator)
            return RequestPolicy.REACHABLE_COMMIT_TIP;
        if (requestValidator instanceof AnyRequestValidator)
            return RequestPolicy.ANY;
        return null;
    }

    /**
     * Set the policy used to enforce validation of a client's want list.
     *
     * @param policy
     *            the policy used to enforce validation of a client's want list.
     *            By default the policy is
     *            {@link org.eclipse.jgit.transport.UploadPack.RequestPolicy#ADVERTISED},
     *            which is the Git default requiring clients to only ask for an
     *            object that a reference directly points to. This may be
     *            relaxed to
     *            {@link org.eclipse.jgit.transport.UploadPack.RequestPolicy#REACHABLE_COMMIT}
     *            or
     *            {@link org.eclipse.jgit.transport.UploadPack.RequestPolicy#REACHABLE_COMMIT_TIP}
     *            when callers have {@link #setBiDirectionalPipe(boolean)} set
     *            to false. Overrides any policy specified in a
     *            {@link org.eclipse.jgit.transport.TransferConfig}.
     */
    public void setRequestPolicy(RequestPolicy policy) {
        switch (policy) {
        case ADVERTISED:
        default:
            requestValidator = new AdvertisedRequestValidator();
            break;
        case REACHABLE_COMMIT:
            requestValidator = new ReachableCommitRequestValidator();
            break;
        case TIP:
            requestValidator = new TipRequestValidator();
            break;
        case REACHABLE_COMMIT_TIP:
            requestValidator = new ReachableCommitTipRequestValidator();
            break;
        case ANY:
            requestValidator = new AnyRequestValidator();
            break;
        }
    }

    /**
     * Set custom validator for client want list.
     *
     * @param validator
     *            custom validator for client want list.
     * @since 3.1
     */
    public void setRequestValidator(@Nullable RequestValidator validator) {
        requestValidator = validator != null ? validator : new AdvertisedRequestValidator();
    }

    /**
     * Get the hook used while advertising the refs to the client.
     *
     * @return the hook used while advertising the refs to the client.
     */
    public AdvertiseRefsHook getAdvertiseRefsHook() {
        return advertiseRefsHook;
    }

    /**
     * Get the filter used while advertising the refs to the client.
     *
     * @return the filter used while advertising the refs to the client.
     */
    public RefFilter getRefFilter() {
        return refFilter;
    }

    /**
     * Set the hook used while advertising the refs to the client.
     * <p>
     * If the {@link org.eclipse.jgit.transport.AdvertiseRefsHook} chooses to
     * call {@link #setAdvertisedRefs(Map)}, only refs set by this hook
     * <em>and</em> selected by the {@link org.eclipse.jgit.transport.RefFilter}
     * will be shown to the client.
     *
     * @param advertiseRefsHook
     *            the hook; may be null to show all refs.
     */
    public void setAdvertiseRefsHook(@Nullable AdvertiseRefsHook advertiseRefsHook) {
        this.advertiseRefsHook = advertiseRefsHook != null ? advertiseRefsHook : AdvertiseRefsHook.DEFAULT;
    }

    /**
     * Set the protocol V2 hook.
     *
     * @param hook
     *            the hook; if null no special actions are taken.
     * @since 5.1
     */
    public void setProtocolV2Hook(@Nullable ProtocolV2Hook hook) {
        this.protocolV2Hook = hook != null ? hook : ProtocolV2Hook.DEFAULT;
    }

    /**
     * Get the currently installed protocol v2 hook.
     *
     * @return the hook or a default implementation if none installed.
     *
     * @since 5.5
     */
    public ProtocolV2Hook getProtocolV2Hook() {
        return this.protocolV2Hook != null ? this.protocolV2Hook : ProtocolV2Hook.DEFAULT;
    }

    /**
     * Set the filter used while advertising the refs to the client.
     * <p>
     * Only refs allowed by this filter will be sent to the client. The filter
     * is run against the refs specified by the
     * {@link org.eclipse.jgit.transport.AdvertiseRefsHook} (if applicable). If
     * null or not set, uses the filter implied by the
     * {@link org.eclipse.jgit.transport.TransferConfig}.
     *
     * @param refFilter
     *            the filter; may be null to show all refs.
     */
    public void setRefFilter(@Nullable RefFilter refFilter) {
        this.refFilter = refFilter != null ? refFilter : RefFilter.DEFAULT;
    }

    /**
     * Get the configured pre upload hook.
     *
     * @return the configured pre upload hook.
     */
    public PreUploadHook getPreUploadHook() {
        return preUploadHook;
    }

    /**
     * Set the hook that controls how this instance will behave.
     *
     * @param hook
     *            the hook; if null no special actions are taken.
     */
    public void setPreUploadHook(@Nullable PreUploadHook hook) {
        preUploadHook = hook != null ? hook : PreUploadHook.NULL;
    }

    /**
     * Get the configured post upload hook.
     *
     * @return the configured post upload hook.
     * @since 4.1
     */
    public PostUploadHook getPostUploadHook() {
        return postUploadHook;
    }

    /**
     * Set the hook for post upload actions (logging, repacking).
     *
     * @param hook
     *            the hook; if null no special actions are taken.
     * @since 4.1
     */
    public void setPostUploadHook(@Nullable PostUploadHook hook) {
        postUploadHook = hook != null ? hook : PostUploadHook.NULL;
    }

    /**
     * Set the configuration used by the pack generator.
     *
     * @param pc
     *            configuration controlling packing parameters. If null the
     *            source repository's settings will be used.
     */
    public void setPackConfig(@Nullable PackConfig pc) {
        this.packConfig = pc;
    }

    /**
     * Set configuration controlling transfer options.
     *
     * @param tc
     *            configuration controlling transfer options. If null the source
     *            repository's settings will be used.
     * @since 3.1
     */
    public void setTransferConfig(@Nullable TransferConfig tc) {
        this.transferConfig = tc != null ? tc : new TransferConfig(db);
        if (transferConfig.isAllowTipSha1InWant()) {
            setRequestPolicy(transferConfig.isAllowReachableSha1InWant() ? RequestPolicy.REACHABLE_COMMIT_TIP
                    : RequestPolicy.TIP);
        } else {
            setRequestPolicy(transferConfig.isAllowReachableSha1InWant() ? RequestPolicy.REACHABLE_COMMIT
                    : RequestPolicy.ADVERTISED);
        }
    }

    /**
     * Check whether the client expects a side-band stream.
     *
     * @return true if the client has advertised a side-band capability, false
     *     otherwise.
     * @throws org.eclipse.jgit.transport.RequestNotYetReadException
     *             if the client's request has not yet been read from the wire, so
     *             we do not know if they expect side-band. Note that the client
     *             may have already written the request, it just has not been
     *             read.
     */
    public boolean isSideBand() throws RequestNotYetReadException {
        if (currentRequest == null) {
            throw new RequestNotYetReadException();
        }
        Set<String> caps = currentRequest.getClientCapabilities();
        return caps.contains(OPTION_SIDE_BAND) || caps.contains(OPTION_SIDE_BAND_64K);
    }

    /**
     * Set the Extra Parameters provided by the client.
     *
     * <p>These are parameters passed by the client through a side channel
     * such as the Git-Protocol HTTP header, to allow a client to request
     * a newer response format while remaining compatible with older servers
     * that do not understand different request formats.
     *
     * @param params
     *            parameters supplied by the client, split at colons or NUL
     *            bytes.
     * @since 5.0
     */
    public void setExtraParameters(Collection<String> params) {
        this.clientRequestedV2 = params.contains("version=2"); //$NON-NLS-1$
    }

    /**
     * @param p provider of URIs corresponding to cached packs (to support
     *     the packfile URIs feature)
     * @since 5.5
     */
    public void setCachedPackUriProvider(@Nullable CachedPackUriProvider p) {
        cachedPackUriProvider = p;
    }

    private boolean useProtocolV2() {
        return ProtocolVersion.V2.equals(transferConfig.protocolVersion) && clientRequestedV2;
    }

    /**
     * Execute the upload task on the socket.
     *
     * <p>
     * Same as {@link #uploadWithExceptionPropagation} except that the thrown
     * exceptions are handled in the method, and the error messages are sent to
     * the clients.
     *
     * <p>
     * Call this method if the caller does not have an error handling mechanism.
     * Call {@link #uploadWithExceptionPropagation} if the caller wants to have
     * its own error handling mechanism.
     *
     * @param input
     * @param output
     * @param messages
     * @throws java.io.IOException
     */
    public void upload(InputStream input, OutputStream output, @Nullable OutputStream messages) throws IOException {
        try {
            uploadWithExceptionPropagation(input, output, messages);
        } catch (ServiceMayNotContinueException err) {
            if (!err.isOutput() && err.getMessage() != null) {
                try {
                    errOut.writeError(err.getMessage());
                } catch (IOException e) {
                    err.addSuppressed(e);
                    throw err;
                }
                err.setOutput();
            }
            throw err;
        } catch (IOException | RuntimeException | Error err) {
            if (rawOut != null) {
                String msg = err instanceof PackProtocolException ? err.getMessage()
                        : JGitText.get().internalServerError;
                try {
                    errOut.writeError(msg);
                } catch (IOException e) {
                    err.addSuppressed(e);
                    throw err;
                }
                throw new UploadPackInternalServerErrorException(err);
            }
            throw err;
        }
    }

    /**
     * Execute the upload task on the socket.
     *
     * <p>
     * If the client passed extra parameters (e.g., "version=2") through a side
     * channel, the caller must call setExtraParameters first to supply them.
     *
     * @param input
     *            raw input to read client commands from. Caller must ensure the
     *            input is buffered, otherwise read performance may suffer.
     * @param output
     *            response back to the Git network client, to write the pack
     *            data onto. Caller must ensure the output is buffered,
     *            otherwise write performance may suffer.
     * @param messages
     *            secondary "notice" channel to send additional messages out
     *            through. When run over SSH this should be tied back to the
     *            standard error channel of the command execution. For most
     *            other network connections this should be null.
     * @throws ServiceMayNotContinueException
     *             thrown if one of the hooks throws this.
     * @throws IOException
     *             thrown if the server or the client I/O fails, or there's an
     *             internal server error.
     * @since 5.6
     */
    public void uploadWithExceptionPropagation(InputStream input, OutputStream output,
            @Nullable OutputStream messages) throws ServiceMayNotContinueException, IOException {
        try {
            rawIn = input;
            if (messages != null) {
                msgOut = messages;
            }

            if (timeout > 0) {
                final Thread caller = Thread.currentThread();
                timer = new InterruptTimer(caller.getName() + "-Timer"); //$NON-NLS-1$
                TimeoutInputStream i = new TimeoutInputStream(rawIn, timer);
                @SuppressWarnings("resource")
                TimeoutOutputStream o = new TimeoutOutputStream(output, timer);
                i.setTimeout(timeout * 1000);
                o.setTimeout(timeout * 1000);
                rawIn = i;
                output = o;
            }

            rawOut = new ResponseBufferedOutputStream(output);
            if (biDirectionalPipe) {
                rawOut.stopBuffering();
            }

            pckIn = new PacketLineIn(rawIn);
            PacketLineOut pckOut = new PacketLineOut(rawOut);
            if (useProtocolV2()) {
                serviceV2(pckOut);
            } else {
                service(pckOut);
            }
        } finally {
            msgOut = NullOutputStream.INSTANCE;
            walk.close();
            if (timer != null) {
                try {
                    timer.terminate();
                } finally {
                    timer = null;
                }
            }
        }
    }

    /**
     * Get the PackWriter's statistics if a pack was sent to the client.
     *
     * @return statistics about pack output, if a pack was sent. Null if no pack
     *         was sent, such as during the negotiation phase of a smart HTTP
     *         connection, or if the client was already up-to-date.
     * @since 4.1
     */
    public PackStatistics getStatistics() {
        return statistics;
    }

    private Map<String, Ref> getAdvertisedOrDefaultRefs() throws IOException {
        if (refs != null) {
            return refs;
        }

        if (!advertiseRefsHookCalled) {
            advertiseRefsHook.advertiseRefs(this);
            advertiseRefsHookCalled = true;
        }
        if (refs == null) {
            // Fall back to all refs.
            setAdvertisedRefs(db.getRefDatabase().getRefs().stream().collect(toRefMap((a, b) -> b)));
        }
        return refs;
    }

    private Map<String, Ref> getFilteredRefs(Collection<String> refPrefixes) throws IOException {
        if (refPrefixes.isEmpty()) {
            return getAdvertisedOrDefaultRefs();
        }
        if (refs == null && !advertiseRefsHookCalled) {
            advertiseRefsHook.advertiseRefs(this);
            advertiseRefsHookCalled = true;
        }
        if (refs == null) {
            // Fast path: the advertised refs hook did not set advertised refs.
            String[] prefixes = refPrefixes.toArray(new String[0]);
            Map<String, Ref> rs = db.getRefDatabase().getRefsByPrefix(prefixes).stream()
                    .collect(toRefMap((a, b) -> b));
            if (refFilter != RefFilter.DEFAULT) {
                return refFilter.filter(rs);
            }
            return transferConfig.getRefFilter().filter(rs);
        }

        // Slow path: filter the refs provided by the advertised refs hook.
        // refFilter has already been applied to refs.
        return refs.values().stream().filter(ref -> refPrefixes.stream().anyMatch(ref.getName()::startsWith))
                .collect(toRefMap((a, b) -> b));
    }

    /**
     * Returns the specified references.
     * <p>
     * This produces an immutable map containing whatever subset of the
     * refs named by the caller are present in the supplied {@code refs}
     * map.
     *
     * @param refs
     *            Map to search for refs to return.
     * @param names
     *            which refs to search for in {@code refs}.
     * @return the requested Refs, omitting any that are null or missing.
     */
    @NonNull
    private static Map<String, Ref> mapRefs(Map<String, Ref> refs, List<String> names) {
        return unmodifiableMap(
                names.stream().map(refs::get).filter(Objects::nonNull).collect(toRefMap((a, b) -> b)));
    }

    /**
     * Read refs on behalf of the client.
     * <p>
     * This checks whether the refs are present in the ref advertisement
     * since otherwise the client might not be supposed to be able to
     * read them.
     *
     * @param names
     *            unabbreviated names of references.
     * @return the requested Refs, omitting any that are not visible or
     *         do not exist.
     * @throws java.io.IOException
     *            on failure to read a ref or check it for visibility.
     */
    @NonNull
    private Map<String, Ref> exactRefs(List<String> names) throws IOException {
        if (refs != null) {
            return mapRefs(refs, names);
        }
        if (!advertiseRefsHookCalled) {
            advertiseRefsHook.advertiseRefs(this);
            advertiseRefsHookCalled = true;
        }
        if (refs == null && refFilter == RefFilter.DEFAULT && transferConfig.hasDefaultRefFilter()) {
            // Fast path: no ref filtering is needed.
            String[] ns = names.toArray(new String[0]);
            return unmodifiableMap(db.getRefDatabase().exactRef(ns));
        }
        return mapRefs(getAdvertisedOrDefaultRefs(), names);
    }

    /**
     * Find a ref in the usual search path on behalf of the client.
     * <p>
     * This checks that the ref is present in the ref advertisement since
     * otherwise the client might not be supposed to be able to read it.
     *
     * @param name
     *            short name of the ref to find, e.g. "master" to find
     *            "refs/heads/master".
     * @return the requested Ref, or {@code null} if it is not visible or
     *         does not exist.
     * @throws java.io.IOException
     *            on failure to read the ref or check it for visibility.
     */
    @Nullable
    private Ref findRef(String name) throws IOException {
        if (refs != null) {
            return RefDatabase.findRef(refs, name);
        }
        if (!advertiseRefsHookCalled) {
            advertiseRefsHook.advertiseRefs(this);
            advertiseRefsHookCalled = true;
        }
        if (refs == null && refFilter == RefFilter.DEFAULT && transferConfig.hasDefaultRefFilter()) {
            // Fast path: no ref filtering is needed.
            return db.getRefDatabase().findRef(name);
        }
        return RefDatabase.findRef(getAdvertisedOrDefaultRefs(), name);
    }

    private void service(PacketLineOut pckOut) throws IOException {
        boolean sendPack = false;
        // If it's a non-bidi request, we need to read the entire request before
        // writing a response. Buffer the response until then.
        PackStatistics.Accumulator accumulator = new PackStatistics.Accumulator();
        List<ObjectId> unshallowCommits = new ArrayList<>();
        FetchRequest req;
        try {
            if (biDirectionalPipe)
                sendAdvertisedRefs(new PacketLineOutRefAdvertiser(pckOut));
            else if (requestValidator instanceof AnyRequestValidator)
                advertised = Collections.emptySet();
            else
                advertised = refIdSet(getAdvertisedOrDefaultRefs().values());

            long negotiateStart = System.currentTimeMillis();
            accumulator.advertised = advertised.size();

            ProtocolV0Parser parser = new ProtocolV0Parser(transferConfig);
            req = parser.recvWants(pckIn);
            currentRequest = req;

            wantIds = req.getWantIds();

            if (req.getWantIds().isEmpty()) {
                preUploadHook.onBeginNegotiateRound(this, req.getWantIds(), 0);
                preUploadHook.onEndNegotiateRound(this, req.getWantIds(), 0, 0, false);
                return;
            }
            accumulator.wants = req.getWantIds().size();

            if (req.getClientCapabilities().contains(OPTION_MULTI_ACK_DETAILED)) {
                multiAck = MultiAck.DETAILED;
                noDone = req.getClientCapabilities().contains(OPTION_NO_DONE);
            } else if (req.getClientCapabilities().contains(OPTION_MULTI_ACK))
                multiAck = MultiAck.CONTINUE;
            else
                multiAck = MultiAck.OFF;

            if (!req.getClientShallowCommits().isEmpty()) {
                verifyClientShallow(req.getClientShallowCommits());
            }

            if (req.getDepth() != 0 || req.getDeepenSince() != 0) {
                computeShallowsAndUnshallows(req, shallow -> {
                    pckOut.writeString("shallow " + shallow.name() + '\n'); //$NON-NLS-1$
                }, unshallow -> {
                    pckOut.writeString("unshallow " + unshallow.name() + '\n'); //$NON-NLS-1$
                    unshallowCommits.add(unshallow);
                }, Collections.emptyList());
                pckOut.end();
            }

            if (!req.getClientShallowCommits().isEmpty())
                walk.assumeShallow(req.getClientShallowCommits());
            sendPack = negotiate(req, accumulator, pckOut);
            accumulator.timeNegotiating += System.currentTimeMillis() - negotiateStart;

            if (sendPack && !biDirectionalPipe) {
                // Ensure the request was fully consumed. Any remaining input must
                // be a protocol error. If we aren't at EOF the implementation is broken.
                int eof = rawIn.read();
                if (0 <= eof) {
                    sendPack = false;
                    throw new CorruptObjectException(MessageFormat.format(JGitText.get().expectedEOFReceived,
                            "\\x" + Integer.toHexString(eof))); //$NON-NLS-1$
                }
            }
        } finally {
            if (!sendPack && !biDirectionalPipe) {
                while (0 < rawIn.skip(2048) || 0 <= rawIn.read()) {
                    // Discard until EOF.
                }
            }
            rawOut.stopBuffering();
        }

        if (sendPack) {
            sendPack(accumulator, req, refs == null ? null : refs.values(), unshallowCommits,
                    Collections.emptyList(), pckOut);
        }
    }

    private void lsRefsV2(PacketLineOut pckOut) throws IOException {
        ProtocolV2Parser parser = new ProtocolV2Parser(transferConfig);
        LsRefsV2Request req = parser.parseLsRefsRequest(pckIn);
        protocolV2Hook.onLsRefs(req);

        rawOut.stopBuffering();
        PacketLineOutRefAdvertiser adv = new PacketLineOutRefAdvertiser(pckOut);
        adv.setUseProtocolV2(true);
        if (req.getPeel()) {
            adv.setDerefTags(true);
        }
        Map<String, Ref> refsToSend = getFilteredRefs(req.getRefPrefixes());
        if (req.getSymrefs()) {
            findSymrefs(adv, refsToSend);
        }

        adv.send(refsToSend.values());
        adv.end();
    }

    // Resolves ref names from the request's want-ref lines to
    // object ids, throwing PackProtocolException if any are missing.
    private Map<String, ObjectId> wantedRefs(FetchV2Request req) throws IOException {
        Map<String, ObjectId> result = new TreeMap<>();

        List<String> wanted = req.getWantedRefs();
        Map<String, Ref> resolved = exactRefs(wanted);

        for (String refName : wanted) {
            Ref ref = resolved.get(refName);
            if (ref == null) {
                throw new PackProtocolException(MessageFormat.format(JGitText.get().invalidRefName, refName));
            }
            ObjectId oid = ref.getObjectId();
            if (oid == null) {
                throw new PackProtocolException(MessageFormat.format(JGitText.get().invalidRefName, refName));
            }
            result.put(refName, oid);
        }
        return result;
    }

    private void fetchV2(PacketLineOut pckOut) throws IOException {
        // Depending on the requestValidator, #processHaveLines may
        // require that advertised be set. Set it only in the required
        // circumstances (to avoid a full ref lookup in the case that
        // we don't need it).
        if (requestValidator instanceof TipRequestValidator
                || requestValidator instanceof ReachableCommitTipRequestValidator
                || requestValidator instanceof AnyRequestValidator) {
            advertised = Collections.emptySet();
        } else {
            advertised = refIdSet(getAdvertisedOrDefaultRefs().values());
        }

        ProtocolV2Parser parser = new ProtocolV2Parser(transferConfig);
        FetchV2Request req = parser.parseFetchRequest(pckIn);
        currentRequest = req;
        rawOut.stopBuffering();

        protocolV2Hook.onFetch(req);

        if (req.getSidebandAll()) {
            pckOut.setUsingSideband(true);
        }

        // TODO(ifrade): Refactor to pass around the Request object, instead of
        // copying data back to class fields
        List<ObjectId> deepenNots = new ArrayList<>();
        for (String s : req.getDeepenNotRefs()) {
            Ref ref = findRef(s);
            if (ref == null) {
                throw new PackProtocolException(MessageFormat.format(JGitText.get().invalidRefName, s));
            }
            deepenNots.add(ref.getObjectId());
        }

        Map<String, ObjectId> wantedRefs = wantedRefs(req);
        // TODO(ifrade): Avoid mutating the parsed request.
        req.getWantIds().addAll(wantedRefs.values());
        wantIds = req.getWantIds();

        boolean sectionSent = false;
        boolean mayHaveShallow = req.getDepth() != 0 || req.getDeepenSince() != 0
                || !req.getDeepenNotRefs().isEmpty();
        List<ObjectId> shallowCommits = new ArrayList<>();
        List<ObjectId> unshallowCommits = new ArrayList<>();

        if (!req.getClientShallowCommits().isEmpty()) {
            verifyClientShallow(req.getClientShallowCommits());
        }
        if (mayHaveShallow) {
            computeShallowsAndUnshallows(req, shallowCommit -> shallowCommits.add(shallowCommit),
                    unshallowCommit -> unshallowCommits.add(unshallowCommit), deepenNots);
        }
        if (!req.getClientShallowCommits().isEmpty())
            walk.assumeShallow(req.getClientShallowCommits());

        if (req.wasDoneReceived()) {
            processHaveLines(req.getPeerHas(), ObjectId.zeroId(), new PacketLineOut(NullOutputStream.INSTANCE));
        } else {
            pckOut.writeString("acknowledgments\n"); //$NON-NLS-1$
            for (ObjectId id : req.getPeerHas()) {
                if (walk.getObjectReader().has(id)) {
                    pckOut.writeString("ACK " + id.getName() + "\n"); //$NON-NLS-1$ //$NON-NLS-2$
                }
            }
            processHaveLines(req.getPeerHas(), ObjectId.zeroId(), new PacketLineOut(NullOutputStream.INSTANCE));
            if (okToGiveUp()) {
                pckOut.writeString("ready\n"); //$NON-NLS-1$
            } else if (commonBase.isEmpty()) {
                pckOut.writeString("NAK\n"); //$NON-NLS-1$
            }
            sectionSent = true;
        }

        if (req.wasDoneReceived() || okToGiveUp()) {
            if (mayHaveShallow) {
                if (sectionSent)
                    pckOut.writeDelim();
                pckOut.writeString("shallow-info\n"); //$NON-NLS-1$
                for (ObjectId o : shallowCommits) {
                    pckOut.writeString("shallow " + o.getName() + '\n'); //$NON-NLS-1$
                }
                for (ObjectId o : unshallowCommits) {
                    pckOut.writeString("unshallow " + o.getName() + '\n'); //$NON-NLS-1$
                }
                sectionSent = true;
            }

            if (!wantedRefs.isEmpty()) {
                if (sectionSent) {
                    pckOut.writeDelim();
                }
                pckOut.writeString("wanted-refs\n"); //$NON-NLS-1$
                for (Map.Entry<String, ObjectId> entry : wantedRefs.entrySet()) {
                    pckOut.writeString(entry.getValue().getName() + ' ' + entry.getKey() + '\n');
                }
                sectionSent = true;
            }

            if (sectionSent)
                pckOut.writeDelim();
            if (!pckOut.isUsingSideband()) {
                // sendPack will write "packfile\n" for us if sideband-all is used.
                // But sideband-all is not used, so we have to write it ourselves.
                pckOut.writeString("packfile\n"); //$NON-NLS-1$
            }
            sendPack(new PackStatistics.Accumulator(), req,
                    req.getClientCapabilities().contains(OPTION_INCLUDE_TAG)
                            ? db.getRefDatabase().getRefsByPrefix(R_TAGS)
                            : null,
                    unshallowCommits, deepenNots, pckOut);
            // sendPack invokes pckOut.end() for us, so we do not
            // need to invoke it here.
        } else {
            // Invoke pckOut.end() by ourselves.
            pckOut.end();
        }
    }

    /*
     * Returns true if this is the last command and we should tear down the
     * connection.
     */
    private boolean serveOneCommandV2(PacketLineOut pckOut) throws IOException {
        String command;
        try {
            command = pckIn.readString();
        } catch (EOFException eof) {
            /* EOF when awaiting command is fine */
            return true;
        }
        if (PacketLineIn.isEnd(command)) {
            // A blank request is valid according
            // to the protocol; do nothing in this
            // case.
            return true;
        }
        if (command.equals("command=" + COMMAND_LS_REFS)) { //$NON-NLS-1$
            lsRefsV2(pckOut);
            return false;
        }
        if (command.equals("command=" + COMMAND_FETCH)) { //$NON-NLS-1$
            fetchV2(pckOut);
            return false;
        }
        throw new PackProtocolException(MessageFormat.format(JGitText.get().unknownTransportCommand, command));
    }

    @SuppressWarnings("nls")
    private List<String> getV2CapabilityAdvertisement() {
        ArrayList<String> caps = new ArrayList<>();
        caps.add("version 2");
        caps.add(COMMAND_LS_REFS);
        boolean advertiseRefInWant = transferConfig.isAllowRefInWant()
                && db.getConfig().getBoolean("uploadpack", null, "advertiserefinwant", true);
        caps.add(COMMAND_FETCH + '=' + (transferConfig.isAllowFilter() ? OPTION_FILTER + ' ' : "")
                + (advertiseRefInWant ? CAPABILITY_REF_IN_WANT + ' ' : "")
                + (transferConfig.isAdvertiseSidebandAll() ? OPTION_SIDEBAND_ALL + ' ' : "")
                + (cachedPackUriProvider != null ? "packfile-uris " : "") + OPTION_SHALLOW);
        caps.add(CAPABILITY_SERVER_OPTION);
        return caps;
    }

    private void serviceV2(PacketLineOut pckOut) throws IOException {
        if (biDirectionalPipe) {
            // Just like in service(), the capability advertisement
            // is sent only if this is a bidirectional pipe. (If
            // not, the client is expected to call
            // sendAdvertisedRefs() on its own.)
            protocolV2Hook.onCapabilities(CapabilitiesV2Request.builder().build());
            for (String s : getV2CapabilityAdvertisement()) {
                pckOut.writeString(s + "\n"); //$NON-NLS-1$
            }
            pckOut.end();

            while (!serveOneCommandV2(pckOut)) {
                // Repeat until an empty command or EOF.
            }
            return;
        }

        try {
            serveOneCommandV2(pckOut);
        } finally {
            while (0 < rawIn.skip(2048) || 0 <= rawIn.read()) {
                // Discard until EOF.
            }
            rawOut.stopBuffering();
        }
    }

    private static Set<ObjectId> refIdSet(Collection<Ref> refs) {
        Set<ObjectId> ids = new HashSet<>(refs.size());
        for (Ref ref : refs) {
            ObjectId id = ref.getObjectId();
            if (id != null) {
                ids.add(id);
            }
            id = ref.getPeeledObjectId();
            if (id != null) {
                ids.add(id);
            }
        }
        return ids;
    }

    /*
     * Determines what object ids must be marked as shallow or unshallow for the
     * client.
     */
    private void computeShallowsAndUnshallows(FetchRequest req, IOConsumer<ObjectId> shallowFunc,
            IOConsumer<ObjectId> unshallowFunc, List<ObjectId> deepenNots) throws IOException {
        if (req.getClientCapabilities().contains(OPTION_DEEPEN_RELATIVE)) {
            // TODO(jonathantanmy): Implement deepen-relative
            throw new UnsupportedOperationException();
        }

        int walkDepth = req.getDepth() == 0 ? Integer.MAX_VALUE : req.getDepth() - 1;
        try (DepthWalk.RevWalk depthWalk = new DepthWalk.RevWalk(walk.getObjectReader(), walkDepth)) {

            depthWalk.setDeepenSince(req.getDeepenSince());

            // Find all the commits which will be shallow
            for (ObjectId o : req.getWantIds()) {
                try {
                    depthWalk.markRoot(depthWalk.parseCommit(o));
                } catch (IncorrectObjectTypeException notCommit) {
                    // Ignore non-commits in this loop.
                }
            }

            depthWalk.setDeepenNots(deepenNots);

            RevCommit o;
            boolean atLeastOne = false;
            while ((o = depthWalk.next()) != null) {
                DepthWalk.Commit c = (DepthWalk.Commit) o;
                atLeastOne = true;

                boolean isBoundary = (c.getDepth() == walkDepth) || c.isBoundary();

                // Commits at the boundary which aren't already shallow in
                // the client need to be marked as such
                if (isBoundary && !req.getClientShallowCommits().contains(c)) {
                    shallowFunc.accept(c.copy());
                }

                // Commits not on the boundary which are shallow in the client
                // need to become unshallowed
                if (!isBoundary && req.getClientShallowCommits().remove(c)) {
                    unshallowFunc.accept(c.copy());
                }
            }
            if (!atLeastOne) {
                throw new PackProtocolException(JGitText.get().noCommitsSelectedForShallow);
            }
        }
    }

    /*
     * Verify all shallow lines refer to commits
     *
     * It can mutate the input set (removing missing object ids from it)
     */
    private void verifyClientShallow(Set<ObjectId> shallowCommits) throws IOException, PackProtocolException {
        AsyncRevObjectQueue q = walk.parseAny(shallowCommits, true);
        try {
            for (;;) {
                try {
                    // Shallow objects named by the client must be commits.
                    RevObject o = q.next();
                    if (o == null) {
                        break;
                    }
                    if (!(o instanceof RevCommit)) {
                        throw new PackProtocolException(
                                MessageFormat.format(JGitText.get().invalidShallowObject, o.name()));
                    }
                } catch (MissingObjectException notCommit) {
                    // shallow objects not known at the server are ignored
                    // by git-core upload-pack, match that behavior.
                    shallowCommits.remove(notCommit.getObjectId());
                    continue;
                }
            }
        } finally {
            q.release();
        }
    }

    /**
     * Generate an advertisement of available refs and capabilities.
     *
     * @param adv
     *            the advertisement formatter.
     * @throws java.io.IOException
     *            the formatter failed to write an advertisement.
     * @throws org.eclipse.jgit.transport.ServiceMayNotContinueException
     *            the hook denied advertisement.
     */
    public void sendAdvertisedRefs(RefAdvertiser adv) throws IOException, ServiceMayNotContinueException {
        sendAdvertisedRefs(adv, null);
    }

    /**
     * Generate an advertisement of available refs and capabilities.
     *
     * @param adv
     *            the advertisement formatter.
     * @param serviceName
     *            if not null, also output "# service=serviceName" followed by a
     *            flush packet before the advertisement. This is required
     *            in v0 of the HTTP protocol, described in Git's
     *            Documentation/technical/http-protocol.txt.
     * @throws java.io.IOException
     *            the formatter failed to write an advertisement.
     * @throws org.eclipse.jgit.transport.ServiceMayNotContinueException
     *            the hook denied advertisement.
     * @since 5.0
     */
    public void sendAdvertisedRefs(RefAdvertiser adv, @Nullable String serviceName)
            throws IOException, ServiceMayNotContinueException {
        if (useProtocolV2()) {
            // The equivalent in v2 is only the capabilities
            // advertisement.
            protocolV2Hook.onCapabilities(CapabilitiesV2Request.builder().build());
            for (String s : getV2CapabilityAdvertisement()) {
                adv.writeOne(s);
            }
            adv.end();
            return;
        }

        Map<String, Ref> advertisedOrDefaultRefs = getAdvertisedOrDefaultRefs();

        if (serviceName != null) {
            adv.writeOne("# service=" + serviceName + '\n'); //$NON-NLS-1$
            adv.end();
        }
        adv.init(db);
        adv.advertiseCapability(OPTION_INCLUDE_TAG);
        adv.advertiseCapability(OPTION_MULTI_ACK_DETAILED);
        adv.advertiseCapability(OPTION_MULTI_ACK);
        adv.advertiseCapability(OPTION_OFS_DELTA);
        adv.advertiseCapability(OPTION_SIDE_BAND);
        adv.advertiseCapability(OPTION_SIDE_BAND_64K);
        adv.advertiseCapability(OPTION_THIN_PACK);
        adv.advertiseCapability(OPTION_NO_PROGRESS);
        adv.advertiseCapability(OPTION_SHALLOW);
        if (!biDirectionalPipe)
            adv.advertiseCapability(OPTION_NO_DONE);
        RequestPolicy policy = getRequestPolicy();
        if (policy == RequestPolicy.TIP || policy == RequestPolicy.REACHABLE_COMMIT_TIP || policy == null)
            adv.advertiseCapability(OPTION_ALLOW_TIP_SHA1_IN_WANT);
        if (policy == RequestPolicy.REACHABLE_COMMIT || policy == RequestPolicy.REACHABLE_COMMIT_TIP
                || policy == null)
            adv.advertiseCapability(OPTION_ALLOW_REACHABLE_SHA1_IN_WANT);
        adv.advertiseCapability(OPTION_AGENT, UserAgent.get());
        if (transferConfig.isAllowFilter()) {
            adv.advertiseCapability(OPTION_FILTER);
        }
        adv.setDerefTags(true);
        findSymrefs(adv, advertisedOrDefaultRefs);
        advertised = adv.send(advertisedOrDefaultRefs.values());

        if (adv.isEmpty())
            adv.advertiseId(ObjectId.zeroId(), "capabilities^{}"); //$NON-NLS-1$
        adv.end();
    }

    /**
     * Send a message to the client, if it supports receiving them.
     * <p>
     * If the client doesn't support receiving messages, the message will be
     * discarded, with no other indication to the caller or to the client.
     *
     * @param what
     *            string describing the problem identified by the hook. The
     *            string must not end with an LF, and must not contain an LF.
     * @since 3.1
     */
    public void sendMessage(String what) {
        try {
            msgOut.write(Constants.encode(what + "\n")); //$NON-NLS-1$
        } catch (IOException e) {
            // Ignore write failures.
        }
    }

    /**
     * Get an underlying stream for sending messages to the client
     *
     * @return an underlying stream for sending messages to the client, or null.
     * @since 3.1
     */
    public OutputStream getMessageOutputStream() {
        return msgOut;
    }

    /**
     * Returns the clone/fetch depth. Valid only after calling recvWants(). A
     * depth of 1 means return only the wants.
     *
     * @return the depth requested by the client, or 0 if unbounded.
     * @since 4.0
     */
    public int getDepth() {
        if (currentRequest == null)
            throw new RequestNotYetReadException();
        return currentRequest.getDepth();
    }

    /**
     * Deprecated synonym for {@code getFilterSpec().getBlobLimit()}.
     *
     * @return filter blob limit requested by the client, or -1 if no limit
     * @since 5.3
     * @deprecated Use {@link #getFilterSpec()} instead
     */
    @Deprecated
    public final long getFilterBlobLimit() {
        return getFilterSpec().getBlobLimit();
    }

    /**
     * Returns the filter spec for the current request. Valid only after
     * calling recvWants(). This may be a no-op filter spec, but it won't be
     * null.
     *
     * @return filter requested by the client
     * @since 5.4
     */
    public final FilterSpec getFilterSpec() {
        if (currentRequest == null) {
            throw new RequestNotYetReadException();
        }
        return currentRequest.getFilterSpec();
    }

    /**
     * Get the user agent of the client.
     * <p>
     * If the client is new enough to use {@code agent=} capability that value
     * will be returned. Older HTTP clients may also supply their version using
     * the HTTP {@code User-Agent} header. The capability overrides the HTTP
     * header if both are available.
     * <p>
     * When an HTTP request has been received this method returns the HTTP
     * {@code User-Agent} header value until capabilities have been parsed.
     *
     * @return user agent supplied by the client. Available only if the client
     *         is new enough to advertise its user agent.
     * @since 4.0
     */
    public String getPeerUserAgent() {
        if (currentRequest != null && currentRequest.getAgent() != null) {
            return currentRequest.getAgent();
        }

        return userAgent;
    }

    private boolean negotiate(FetchRequest req, PackStatistics.Accumulator accumulator, PacketLineOut pckOut)
            throws IOException {
        okToGiveUp = Boolean.FALSE;

        ObjectId last = ObjectId.zeroId();
        List<ObjectId> peerHas = new ArrayList<>(64);
        for (;;) {
            String line;
            try {
                line = pckIn.readString();
            } catch (EOFException eof) {
                // EOF on stateless RPC (aka smart HTTP) and non-shallow request
                // means the client asked for the updated shallow/unshallow data,
                // disconnected, and will try another request with actual want/have.
                // Don't report the EOF here, its a bug in the protocol that the client
                // just disconnects without sending an END.
                if (!biDirectionalPipe && req.getDepth() > 0)
                    return false;
                throw eof;
            }

            if (PacketLineIn.isEnd(line)) {
                last = processHaveLines(peerHas, last, pckOut);
                if (commonBase.isEmpty() || multiAck != MultiAck.OFF)
                    pckOut.writeString("NAK\n"); //$NON-NLS-1$
                if (noDone && sentReady) {
                    pckOut.writeString("ACK " + last.name() + "\n"); //$NON-NLS-1$ //$NON-NLS-2$
                    return true;
                }
                if (!biDirectionalPipe)
                    return false;
                pckOut.flush();

            } else if (line.startsWith("have ") && line.length() == 45) { //$NON-NLS-1$
                peerHas.add(ObjectId.fromString(line.substring(5)));
                accumulator.haves++;
            } else if (line.equals("done")) { //$NON-NLS-1$
                last = processHaveLines(peerHas, last, pckOut);

                if (commonBase.isEmpty())
                    pckOut.writeString("NAK\n"); //$NON-NLS-1$

                else if (multiAck != MultiAck.OFF)
                    pckOut.writeString("ACK " + last.name() + "\n"); //$NON-NLS-1$ //$NON-NLS-2$

                return true;

            } else {
                throw new PackProtocolException(MessageFormat.format(JGitText.get().expectedGot, "have", line)); //$NON-NLS-1$
            }
        }
    }

    private ObjectId processHaveLines(List<ObjectId> peerHas, ObjectId last, PacketLineOut out) throws IOException {
        preUploadHook.onBeginNegotiateRound(this, wantIds, peerHas.size());
        if (wantAll.isEmpty() && !wantIds.isEmpty())
            parseWants();
        if (peerHas.isEmpty())
            return last;

        sentReady = false;
        int haveCnt = 0;
        walk.getObjectReader().setAvoidUnreachableObjects(true);
        AsyncRevObjectQueue q = walk.parseAny(peerHas, false);
        try {
            for (;;) {
                RevObject obj;
                try {
                    obj = q.next();
                } catch (MissingObjectException notFound) {
                    continue;
                }
                if (obj == null)
                    break;

                last = obj;
                haveCnt++;

                if (obj instanceof RevCommit) {
                    RevCommit c = (RevCommit) obj;
                    if (oldestTime == 0 || c.getCommitTime() < oldestTime)
                        oldestTime = c.getCommitTime();
                }

                if (obj.has(PEER_HAS))
                    continue;

                obj.add(PEER_HAS);
                if (obj instanceof RevCommit)
                    ((RevCommit) obj).carry(PEER_HAS);
                addCommonBase(obj);

                // If both sides have the same object; let the client know.
                //
                switch (multiAck) {
                case OFF:
                    if (commonBase.size() == 1)
                        out.writeString("ACK " + obj.name() + "\n"); //$NON-NLS-1$ //$NON-NLS-2$
                    break;
                case CONTINUE:
                    out.writeString("ACK " + obj.name() + " continue\n"); //$NON-NLS-1$ //$NON-NLS-2$
                    break;
                case DETAILED:
                    out.writeString("ACK " + obj.name() + " common\n"); //$NON-NLS-1$ //$NON-NLS-2$
                    break;
                }
            }
        } finally {
            q.release();
            walk.getObjectReader().setAvoidUnreachableObjects(false);
        }

        int missCnt = peerHas.size() - haveCnt;

        // If we don't have one of the objects but we're also willing to
        // create a pack at this point, let the client know so it stops
        // telling us about its history.
        //
        boolean didOkToGiveUp = false;
        if (0 < missCnt) {
            for (int i = peerHas.size() - 1; i >= 0; i--) {
                ObjectId id = peerHas.get(i);
                if (walk.lookupOrNull(id) == null) {
                    didOkToGiveUp = true;
                    if (okToGiveUp()) {
                        switch (multiAck) {
                        case OFF:
                            break;
                        case CONTINUE:
                            out.writeString("ACK " + id.name() + " continue\n"); //$NON-NLS-1$ //$NON-NLS-2$
                            break;
                        case DETAILED:
                            out.writeString("ACK " + id.name() + " ready\n"); //$NON-NLS-1$ //$NON-NLS-2$
                            sentReady = true;
                            break;
                        }
                    }
                    break;
                }
            }
        }

        if (multiAck == MultiAck.DETAILED && !didOkToGiveUp && okToGiveUp()) {
            ObjectId id = peerHas.get(peerHas.size() - 1);
            out.writeString("ACK " + id.name() + " ready\n"); //$NON-NLS-1$ //$NON-NLS-2$
            sentReady = true;
        }

        preUploadHook.onEndNegotiateRound(this, wantAll, haveCnt, missCnt, sentReady);
        peerHas.clear();
        return last;
    }

    private void parseWants() throws IOException {
        List<ObjectId> notAdvertisedWants = null;
        for (ObjectId obj : wantIds) {
            if (!advertised.contains(obj)) {
                if (notAdvertisedWants == null)
                    notAdvertisedWants = new ArrayList<>();
                notAdvertisedWants.add(obj);
            }
        }
        if (notAdvertisedWants != null)
            requestValidator.checkWants(this, notAdvertisedWants);

        AsyncRevObjectQueue q = walk.parseAny(wantIds, true);
        try {
            RevObject obj;
            while ((obj = q.next()) != null) {
                want(obj);

                if (!(obj instanceof RevCommit))
                    obj.add(SATISFIED);
                if (obj instanceof RevTag) {
                    obj = walk.peel(obj);
                    if (obj instanceof RevCommit)
                        want(obj);
                }
            }
            wantIds.clear();
        } catch (MissingObjectException notFound) {
            throw new WantNotValidException(notFound.getObjectId(), notFound);
        } finally {
            q.release();
        }
    }

    private void want(RevObject obj) {
        if (!obj.has(WANT)) {
            obj.add(WANT);
            wantAll.add(obj);
        }
    }

    /**
     * Validator corresponding to {@link RequestPolicy#ADVERTISED}.
     *
     * @since 3.1
     */
    public static final class AdvertisedRequestValidator implements RequestValidator {
        @Override
        public void checkWants(UploadPack up, List<ObjectId> wants) throws PackProtocolException, IOException {
            if (!up.isBiDirectionalPipe())
                new ReachableCommitRequestValidator().checkWants(up, wants);
            else if (!wants.isEmpty())
                throw new WantNotValidException(wants.iterator().next());
        }
    }

    /**
     * Validator corresponding to {@link RequestPolicy#REACHABLE_COMMIT}.
     *
     * @since 3.1
     */
    public static final class ReachableCommitRequestValidator implements RequestValidator {
        @Override
        public void checkWants(UploadPack up, List<ObjectId> wants) throws PackProtocolException, IOException {
            checkNotAdvertisedWants(up, wants, up.getAdvertisedRefs().values());
        }
    }

    /**
     * Validator corresponding to {@link RequestPolicy#TIP}.
     *
     * @since 3.1
     */
    public static final class TipRequestValidator implements RequestValidator {
        @Override
        public void checkWants(UploadPack up, List<ObjectId> wants) throws PackProtocolException, IOException {
            if (!up.isBiDirectionalPipe())
                new ReachableCommitTipRequestValidator().checkWants(up, wants);
            else if (!wants.isEmpty()) {
                Set<ObjectId> refIds = refIdSet(up.getRepository().getRefDatabase().getRefs());
                for (ObjectId obj : wants) {
                    if (!refIds.contains(obj))
                        throw new WantNotValidException(obj);
                }
            }
        }
    }

    /**
     * Validator corresponding to {@link RequestPolicy#REACHABLE_COMMIT_TIP}.
     *
     * @since 3.1
     */
    public static final class ReachableCommitTipRequestValidator implements RequestValidator {
        @Override
        public void checkWants(UploadPack up, List<ObjectId> wants) throws PackProtocolException, IOException {
            checkNotAdvertisedWants(up, wants, up.getRepository().getRefDatabase().getRefs());
        }
    }

    /**
     * Validator corresponding to {@link RequestPolicy#ANY}.
     *
     * @since 3.1
     */
    public static final class AnyRequestValidator implements RequestValidator {
        @Override
        public void checkWants(UploadPack up, List<ObjectId> wants) throws PackProtocolException, IOException {
            // All requests are valid.
        }
    }

    private static void checkNotAdvertisedWantsUsingBitmap(ObjectReader reader, BitmapIndex bitmapIndex,
            List<ObjectId> notAdvertisedWants, Set<ObjectId> reachableFrom) throws IOException {
        BitmapWalker bitmapWalker = new BitmapWalker(new ObjectWalk(reader), bitmapIndex, null);
        BitmapBuilder reachables = bitmapWalker.findObjects(reachableFrom, null, false);
        for (ObjectId oid : notAdvertisedWants) {
            if (!reachables.contains(oid)) {
                throw new WantNotValidException(oid);
            }
        }
    }

    private static void checkReachabilityByWalkingObjects(ObjectWalk walk, List<RevObject> wants,
            Set<ObjectId> reachableFrom) throws IOException {

        walk.sort(RevSort.TOPO);
        for (RevObject want : wants) {
            walk.markStart(want);
        }
        for (ObjectId have : reachableFrom) {
            RevObject o = walk.parseAny(have);
            walk.markUninteresting(o);

            RevObject peeled = walk.peel(o);
            if (peeled instanceof RevCommit) {
                // By default, for performance reasons, ObjectWalk does not mark a
                // tree as uninteresting when we mark a commit. Mark it ourselves so
                // that we can determine reachability exactly.
                walk.markUninteresting(((RevCommit) peeled).getTree());
            }
        }

        RevCommit commit = walk.next();
        if (commit != null) {
            throw new WantNotValidException(commit);
        }
        RevObject object = walk.nextObject();
        if (object != null) {
            throw new WantNotValidException(object);
        }
    }

    private static void checkNotAdvertisedWants(UploadPack up, List<ObjectId> notAdvertisedWants,
            Collection<Ref> visibleRefs) throws IOException {

        ObjectReader reader = up.getRevWalk().getObjectReader();

        try (RevWalk walk = new RevWalk(reader)) {
            walk.setRetainBody(false);
            Set<ObjectId> reachableFrom = refIdSet(visibleRefs);
            // Missing "wants" throw exception here
            List<RevObject> wantsAsObjs = objectIdsToRevObjects(walk, notAdvertisedWants);
            List<RevCommit> wantsAsCommits = wantsAsObjs.stream().filter(obj -> obj instanceof RevCommit)
                    .map(obj -> (RevCommit) obj).collect(Collectors.toList());
            boolean allWantsAreCommits = wantsAsObjs.size() == wantsAsCommits.size();
            boolean repoHasBitmaps = reader.getBitmapIndex() != null;

            if (!allWantsAreCommits) {
                if (!repoHasBitmaps) {
                    if (up.transferConfig.isAllowFilter()) {
                        // Use allowFilter as an indication that the server
                        // operator is willing to pay the cost of these
                        // reachability checks.
                        try (ObjectWalk objWalk = walk.toObjectWalkWithSameObjects()) {
                            checkReachabilityByWalkingObjects(objWalk, wantsAsObjs, reachableFrom);
                        }
                        return;
                    }

                    // If unadvertized non-commits are requested, use
                    // bitmaps. If there are no bitmaps, instead of
                    // incurring the expense of a manual walk, reject
                    // the request.
                    RevObject nonCommit = wantsAsObjs.stream().filter(obj -> !(obj instanceof RevCommit)).limit(1)
                            .collect(Collectors.toList()).get(0);
                    throw new WantNotValidException(nonCommit);

                }
                checkNotAdvertisedWantsUsingBitmap(reader, reader.getBitmapIndex(), notAdvertisedWants,
                        reachableFrom);
                return;
            }

            // All wants are commits, we can use ReachabilityChecker
            ReachabilityChecker reachabilityChecker = walk.createReachabilityChecker();

            Stream<RevCommit> reachableCommits = importantRefsFirst(visibleRefs).map(UploadPack::refToObjectId)
                    .map(objId -> objectIdToRevCommit(walk, objId)).filter(Objects::nonNull); // Ignore missing tips

            Optional<RevCommit> unreachable = reachabilityChecker.areAllReachable(wantsAsCommits, reachableCommits);
            if (unreachable.isPresent()) {
                throw new WantNotValidException(unreachable.get());
            }

        } catch (MissingObjectException notFound) {
            throw new WantNotValidException(notFound.getObjectId(), notFound);
        }
    }

    static Stream<Ref> importantRefsFirst(Collection<Ref> visibleRefs) {
        Predicate<Ref> startsWithRefsHeads = ref -> ref.getName().startsWith(Constants.R_HEADS);
        Predicate<Ref> startsWithRefsTags = ref -> ref.getName().startsWith(Constants.R_TAGS);
        Predicate<Ref> allOther = ref -> !startsWithRefsHeads.test(ref) && !startsWithRefsTags.test(ref);

        return Stream.concat(visibleRefs.stream().filter(startsWithRefsHeads), Stream
                .concat(visibleRefs.stream().filter(startsWithRefsTags), visibleRefs.stream().filter(allOther)));
    }

    private static ObjectId refToObjectId(Ref ref) {
        return ref.getObjectId() != null ? ref.getObjectId() : ref.getPeeledObjectId();
    }

    /**
     * Translate an object id to a RevCommit.
     *
     * @param walk
     *            walk on the relevant object storae
     * @param objectId
     *            Object Id
     * @return RevCommit instance or null if the object is missing
     */
    @Nullable
    private static RevCommit objectIdToRevCommit(RevWalk walk, ObjectId objectId) {
        if (objectId == null) {
            return null;
        }

        try {
            return walk.parseCommit(objectId);
        } catch (IOException e) {
            return null;
        }
    }

    // Resolve the ObjectIds into RevObjects. Any missing object raises an
    // exception
    private static List<RevObject> objectIdsToRevObjects(RevWalk walk, Iterable<ObjectId> objectIds)
            throws MissingObjectException, IOException {
        List<RevObject> result = new ArrayList<>();
        for (ObjectId objectId : objectIds) {
            result.add(walk.parseAny(objectId));
        }
        return result;
    }

    private void addCommonBase(RevObject o) {
        if (!o.has(COMMON)) {
            o.add(COMMON);
            commonBase.add(o);
            okToGiveUp = null;
        }
    }

    private boolean okToGiveUp() throws PackProtocolException {
        if (okToGiveUp == null)
            okToGiveUp = Boolean.valueOf(okToGiveUpImp());
        return okToGiveUp.booleanValue();
    }

    private boolean okToGiveUpImp() throws PackProtocolException {
        if (commonBase.isEmpty())
            return false;

        try {
            for (RevObject obj : wantAll) {
                if (!wantSatisfied(obj))
                    return false;
            }
            return true;
        } catch (IOException e) {
            throw new PackProtocolException(JGitText.get().internalRevisionError, e);
        }
    }

    private boolean wantSatisfied(RevObject want) throws IOException {
        if (want.has(SATISFIED))
            return true;

        walk.resetRetain(SAVE);
        walk.markStart((RevCommit) want);
        if (oldestTime != 0)
            walk.setRevFilter(CommitTimeRevFilter.after(oldestTime * 1000L));
        for (;;) {
            final RevCommit c = walk.next();
            if (c == null)
                break;
            if (c.has(PEER_HAS)) {
                addCommonBase(c);
                want.add(SATISFIED);
                return true;
            }
        }
        return false;
    }

    /**
     * Send the requested objects to the client.
     *
     * @param accumulator
     *            where to write statistics about the content of the pack.
     * @param req
     *            request in process
     * @param allTags
     *            refs to search for annotated tags to include in the pack if
     *            the {@link #OPTION_INCLUDE_TAG} capability was requested.
     * @param unshallowCommits
     *            shallow commits on the client that are now becoming unshallow
     * @param deepenNots
     *            objects that the client specified using --shallow-exclude
     * @param pckOut
     *            output writer
     * @throws IOException
     *             if an error occurred while generating or writing the pack.
     */
    private void sendPack(PackStatistics.Accumulator accumulator, FetchRequest req,
            @Nullable Collection<Ref> allTags, List<ObjectId> unshallowCommits, List<ObjectId> deepenNots,
            PacketLineOut pckOut) throws IOException {
        Set<String> caps = req.getClientCapabilities();
        boolean sideband = caps.contains(OPTION_SIDE_BAND) || caps.contains(OPTION_SIDE_BAND_64K);

        if (sideband) {
            errOut = new SideBandErrorWriter();

            int bufsz = SideBandOutputStream.SMALL_BUF;
            if (req.getClientCapabilities().contains(OPTION_SIDE_BAND_64K)) {
                bufsz = SideBandOutputStream.MAX_BUF;
            }
            OutputStream packOut = new SideBandOutputStream(SideBandOutputStream.CH_DATA, bufsz, rawOut);

            ProgressMonitor pm = NullProgressMonitor.INSTANCE;
            if (!req.getClientCapabilities().contains(OPTION_NO_PROGRESS)) {
                msgOut = new SideBandOutputStream(SideBandOutputStream.CH_PROGRESS, bufsz, rawOut);
                pm = new SideBandProgressMonitor(msgOut);
            }

            sendPack(pm, pckOut, packOut, req, accumulator, allTags, unshallowCommits, deepenNots);
            pckOut.end();
        } else {
            sendPack(NullProgressMonitor.INSTANCE, pckOut, rawOut, req, accumulator, allTags, unshallowCommits,
                    deepenNots);
        }
    }

    /**
     * Send the requested objects to the client.
     *
     * @param pm
     *            progress monitor
     * @param pckOut
     *            PacketLineOut that shares the output with packOut
     * @param packOut
     *            packfile output
     * @param req
     *            request being processed
     * @param accumulator
     *            where to write statistics about the content of the pack.
     * @param allTags
     *            refs to search for annotated tags to include in the pack if
     *            the {@link #OPTION_INCLUDE_TAG} capability was requested.
     * @param unshallowCommits
     *            shallow commits on the client that are now becoming unshallow
     * @param deepenNots
     *            objects that the client specified using --shallow-exclude
     * @throws IOException
     *             if an error occurred while generating or writing the pack.
     */
    private void sendPack(ProgressMonitor pm, PacketLineOut pckOut, OutputStream packOut, FetchRequest req,
            PackStatistics.Accumulator accumulator, @Nullable Collection<Ref> allTags,
            List<ObjectId> unshallowCommits, List<ObjectId> deepenNots) throws IOException {
        if (wantAll.isEmpty()) {
            preUploadHook.onSendPack(this, wantIds, commonBase);
        } else {
            preUploadHook.onSendPack(this, wantAll, commonBase);
        }
        msgOut.flush();

        PackConfig cfg = packConfig;
        if (cfg == null)
            cfg = new PackConfig(db);
        @SuppressWarnings("resource") // PackWriter is referenced in the finally
        // block, and is closed there
        final PackWriter pw = new PackWriter(cfg, walk.getObjectReader(), accumulator);
        try {
            pw.setIndexDisabled(true);
            if (req.getFilterSpec().isNoOp()) {
                pw.setUseCachedPacks(true);
            } else {
                pw.setFilterSpec(req.getFilterSpec());
                pw.setUseCachedPacks(false);
            }
            pw.setUseBitmaps(req.getDepth() == 0 && req.getClientShallowCommits().isEmpty()
                    && req.getFilterSpec().getTreeDepthLimit() == -1);
            pw.setClientShallowCommits(req.getClientShallowCommits());
            pw.setReuseDeltaCommits(true);
            pw.setDeltaBaseAsOffset(req.getClientCapabilities().contains(OPTION_OFS_DELTA));
            pw.setThin(req.getClientCapabilities().contains(OPTION_THIN_PACK));
            pw.setReuseValidatingObjects(false);

            // Objects named directly by references go at the beginning
            // of the pack.
            if (commonBase.isEmpty() && refs != null) {
                Set<ObjectId> tagTargets = new HashSet<>();
                for (Ref ref : refs.values()) {
                    if (ref.getPeeledObjectId() != null)
                        tagTargets.add(ref.getPeeledObjectId());
                    else if (ref.getObjectId() == null)
                        continue;
                    else if (ref.getName().startsWith(Constants.R_HEADS))
                        tagTargets.add(ref.getObjectId());
                }
                pw.setTagTargets(tagTargets);
            }

            RevWalk rw = walk;
            if (req.getDepth() > 0 || req.getDeepenSince() != 0 || !deepenNots.isEmpty()) {
                int walkDepth = req.getDepth() == 0 ? Integer.MAX_VALUE : req.getDepth() - 1;
                pw.setShallowPack(req.getDepth(), unshallowCommits);

                @SuppressWarnings("resource") // Ownership is transferred below
                DepthWalk.RevWalk dw = new DepthWalk.RevWalk(walk.getObjectReader(), walkDepth);
                dw.setDeepenSince(req.getDeepenSince());
                dw.setDeepenNots(deepenNots);
                dw.assumeShallow(req.getClientShallowCommits());
                rw = dw;
            }

            if (wantAll.isEmpty()) {
                pw.preparePack(pm, wantIds, commonBase, req.getClientShallowCommits());
            } else {
                walk.reset();

                ObjectWalk ow = rw.toObjectWalkWithSameObjects();
                pw.preparePack(pm, ow, wantAll, commonBase, PackWriter.NONE);
                rw = ow;
            }

            if (req.getClientCapabilities().contains(OPTION_INCLUDE_TAG) && allTags != null) {
                for (Ref ref : allTags) {
                    ObjectId objectId = ref.getObjectId();
                    if (objectId == null) {
                        // skip unborn branch
                        continue;
                    }

                    // If the object was already requested, skip it.
                    if (wantAll.isEmpty()) {
                        if (wantIds.contains(objectId))
                            continue;
                    } else {
                        RevObject obj = rw.lookupOrNull(objectId);
                        if (obj != null && obj.has(WANT))
                            continue;
                    }

                    if (!ref.isPeeled())
                        ref = db.getRefDatabase().peel(ref);

                    ObjectId peeledId = ref.getPeeledObjectId();
                    objectId = ref.getObjectId();
                    if (peeledId == null || objectId == null)
                        continue;

                    objectId = ref.getObjectId();
                    if (pw.willInclude(peeledId) && !pw.willInclude(objectId)) {
                        RevObject o = rw.parseAny(objectId);
                        addTagChain(o, pw);
                        pw.addObject(o);
                    }
                }
            }

            if (pckOut.isUsingSideband()) {
                if (req instanceof FetchV2Request && cachedPackUriProvider != null
                        && !((FetchV2Request) req).getPackfileUriProtocols().isEmpty()) {
                    FetchV2Request reqV2 = (FetchV2Request) req;
                    pw.setPackfileUriConfig(new PackWriter.PackfileUriConfig(pckOut,
                            reqV2.getPackfileUriProtocols(), cachedPackUriProvider));
                } else {
                    // PackWriter will write "packfile-uris\n" and "packfile\n"
                    // for us if provided a PackfileUriConfig. In this case, we
                    // are not providing a PackfileUriConfig, so we have to
                    // write this line ourselves.
                    pckOut.writeString("packfile\n"); //$NON-NLS-1$
                }
            }
            pw.writePack(pm, NullProgressMonitor.INSTANCE, packOut);

            if (msgOut != NullOutputStream.INSTANCE) {
                String msg = pw.getStatistics().getMessage() + '\n';
                msgOut.write(Constants.encode(msg));
                msgOut.flush();
            }

        } finally {
            statistics = pw.getStatistics();
            if (statistics != null) {
                postUploadHook.onPostUpload(statistics);
            }
            pw.close();
        }
    }

    private static void findSymrefs(final RefAdvertiser adv, final Map<String, Ref> refs) {
        Ref head = refs.get(Constants.HEAD);
        if (head != null && head.isSymbolic()) {
            adv.addSymref(Constants.HEAD, head.getLeaf().getName());
        }
    }

    private void addTagChain(RevObject o, PackWriter pw) throws IOException {
        while (Constants.OBJ_TAG == o.getType()) {
            RevTag t = (RevTag) o;
            o = t.getObject();
            if (o.getType() == Constants.OBJ_TAG && !pw.willInclude(o.getId())) {
                walk.parseBody(o);
                pw.addObject(o);
            }
        }
    }

    private static class ResponseBufferedOutputStream extends OutputStream {
        private final OutputStream rawOut;

        private OutputStream out;

        ResponseBufferedOutputStream(OutputStream rawOut) {
            this.rawOut = rawOut;
            this.out = new ByteArrayOutputStream();
        }

        @Override
        public void write(int b) throws IOException {
            out.write(b);
        }

        @Override
        public void write(byte b[]) throws IOException {
            out.write(b);
        }

        @Override
        public void write(byte b[], int off, int len) throws IOException {
            out.write(b, off, len);
        }

        @Override
        public void flush() throws IOException {
            out.flush();
        }

        @Override
        public void close() throws IOException {
            out.close();
        }

        void stopBuffering() throws IOException {
            if (out != rawOut) {
                ((ByteArrayOutputStream) out).writeTo(rawOut);
                out = rawOut;
            }
        }
    }

    private interface ErrorWriter {
        void writeError(String message) throws IOException;
    }

    private class SideBandErrorWriter implements ErrorWriter {
        @Override
        public void writeError(String message) throws IOException {
            @SuppressWarnings("resource" /* java 7 */)
            SideBandOutputStream err = new SideBandOutputStream(SideBandOutputStream.CH_ERROR,
                    SideBandOutputStream.SMALL_BUF, requireNonNull(rawOut));
            err.write(Constants.encode(message));
            err.flush();
        }
    }

    private class PackProtocolErrorWriter implements ErrorWriter {
        @Override
        public void writeError(String message) throws IOException {
            new PacketLineOut(requireNonNull(rawOut)).writeString("ERR " + message + '\n'); //$NON-NLS-1$
        }
    }
}