Example usage for org.apache.commons.cli HelpFormatter HelpFormatter

List of usage examples for org.apache.commons.cli HelpFormatter HelpFormatter

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HelpFormatter

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From source file:com.jgaap.backend.CLI.java

/**
 * Parses the arguments passed to jgaap from the command line. Will either
 * display the help or run jgaap on an experiment.
 * /*  w  w  w .  j ava 2  s  .c o m*/
 * @param args
 *            command line arguments
 * @throws Exception
 */
public static void main(String[] args) throws Exception {
    CommandLineParser parser = new GnuParser();
    CommandLine cmd = parser.parse(options, args);
    if (cmd.hasOption('h')) {
        String command = cmd.getOptionValue('h');
        if (command == null) {
            HelpFormatter helpFormatter = new HelpFormatter();
            helpFormatter.setLeftPadding(5);
            helpFormatter.setWidth(100);
            helpFormatter.printHelp(
                    "jgaap -c [canon canon ...] -es [event] -ec [culler culler ...] -a [analysis] <-d [distance]> -l [file] <-s [file]>",
                    "Welcome to JGAAP the Java Graphical Authorship Attribution Program.\nMore information can be found at http://jgaap.com",
                    options, "Copyright 2013 Evaluating Variation in Language Lab, Duquesne University");
        } else {
            List<Displayable> list = new ArrayList<Displayable>();
            if (command.equalsIgnoreCase("c")) {
                list.addAll(Canonicizers.getCanonicizers());
            } else if (command.equalsIgnoreCase("es")) {
                list.addAll(EventDrivers.getEventDrivers());
            } else if (command.equalsIgnoreCase("ec")) {
                list.addAll(EventCullers.getEventCullers());
            } else if (command.equalsIgnoreCase("a")) {
                list.addAll(AnalysisDrivers.getAnalysisDrivers());
            } else if (command.equalsIgnoreCase("d")) {
                list.addAll(DistanceFunctions.getDistanceFunctions());
            } else if (command.equalsIgnoreCase("lang")) {
                list.addAll(Languages.getLanguages());
            }
            for (Displayable display : list) {
                if (display.showInGUI())
                    System.out.println(display.displayName() + " - " + display.tooltipText());
            }
            if (list.isEmpty()) {
                System.out.println("Option " + command + " was not found.");
                System.out.println("Please use c, es, d, a, or lang");
            }
        }
    } else if (cmd.hasOption('v')) {
        System.out.println("Java Graphical Authorship Attribution Program version 5.2.0");
    } else if (cmd.hasOption("ee")) {
        String eeFile = cmd.getOptionValue("ee");
        String lang = cmd.getOptionValue("lang");
        ExperimentEngine.runExperiment(eeFile, lang);
        System.exit(0);
    } else {
        JGAAP.commandline = true;
        API api = API.getPrivateInstance();
        String documentsFilePath = cmd.getOptionValue('l');
        if (documentsFilePath == null) {
            throw new Exception("No Documents CSV specified");
        }
        List<Document> documents;
        if (documentsFilePath.startsWith(JGAAPConstants.JGAAP_RESOURCE_PACKAGE)) {
            documents = Utils.getDocumentsFromCSV(
                    CSVIO.readCSV(com.jgaap.JGAAP.class.getResourceAsStream(documentsFilePath)));
        } else {
            documents = Utils.getDocumentsFromCSV(CSVIO.readCSV(documentsFilePath));
        }
        for (Document document : documents) {
            api.addDocument(document);
        }
        String language = cmd.getOptionValue("lang", "english");
        api.setLanguage(language);
        String[] canonicizers = cmd.getOptionValues('c');
        if (canonicizers != null) {
            for (String canonicizer : canonicizers) {
                api.addCanonicizer(canonicizer);
            }
        }
        String[] events = cmd.getOptionValues("es");
        if (events == null) {
            throw new Exception("No EventDriver specified");
        }
        for (String event : events) {
            api.addEventDriver(event);
        }
        String[] eventCullers = cmd.getOptionValues("ec");
        if (eventCullers != null) {
            for (String eventCuller : eventCullers) {
                api.addEventCuller(eventCuller);
            }
        }
        String analysis = cmd.getOptionValue('a');
        if (analysis == null) {
            throw new Exception("No AnalysisDriver specified");
        }
        AnalysisDriver analysisDriver = api.addAnalysisDriver(analysis);
        String distanceFunction = cmd.getOptionValue('d');
        if (distanceFunction != null) {
            api.addDistanceFunction(distanceFunction, analysisDriver);
        }
        api.execute();
        List<Document> unknowns = api.getUnknownDocuments();
        OutputStreamWriter outputStreamWriter;
        String saveFile = cmd.getOptionValue('s');
        if (saveFile == null) {
            outputStreamWriter = new OutputStreamWriter(System.out);
        } else {
            outputStreamWriter = new OutputStreamWriter(new FileOutputStream(saveFile));
        }
        Writer writer = new BufferedWriter(outputStreamWriter);
        for (Document unknown : unknowns) {
            writer.append(unknown.getFormattedResult(analysisDriver));
        }
        writer.append('\n');
    }
}

From source file:com.xtructure.xnet.demos.art.TwoNodeSimulation.java

/**
 * The main method./*w  ww . j ava  2 s  . co  m*/
 * 
 * @param args
 *            the arguments
 */
public static void main(String[] args) {
    Options options = new Options();
    options.addOption("n", "networkFile", true, //
            "the xml file from which the network is loaded");
    options.addOption("i", "inputFile", true, //
            "the xml file from which the input is loaded");
    options.addOption("test", false,
            "run integration test (non-gui, ignores networkFile and inputFile options)");
    BasicParser bp = new BasicParser();
    try {
        CommandLine cl = bp.parse(options, args);
        if (cl.hasOption("test")) {
            new TwoNodeSimulation();
        } else {
            File networkFile = new File(RESOURCE_DIR, "default.network.xml");
            File inputFile = new File(RESOURCE_DIR, "default.input.xml");
            loadConfigFiles(RESOURCE_DIR, inputFile, networkFile);
            if (cl.hasOption("n")) {
                networkFile = new File(cl.getOptionValue("n")).getAbsoluteFile();
            }
            if (cl.hasOption("i")) {
                inputFile = new File(cl.getOptionValue("i")).getAbsoluteFile();
            }
            new TwoNodeSimulation(networkFile, inputFile);
        }
    } catch (ParseException e) {
        System.err.println(e.getMessage());
        HelpFormatter hf = new HelpFormatter();
        hf.printHelp("Usage:", options);
    } catch (XMLStreamException e) {
        e.printStackTrace();
    } catch (IOException e) {
        e.printStackTrace();
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosGraphQueryGrabats.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);/*from   w  w w. ja  va2s.c  o  m*/
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option optFileOpt = OptionBuilder.create(OPTIONS_FILE);
    optFileOpt.setArgName("FILE");
    optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource");
    optFileOpt.setArgs(1);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(optFileOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME,
                new BlueprintsPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosGraphQueryGrabats.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap()
                .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();

        if (commandLine.hasOption(OPTIONS_FILE)) {
            Properties properties = new Properties();
            properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE))));
            for (final Entry<Object, Object> entry : properties.entrySet()) {
                loadOpts.put((String) entry.getKey(), (String) entry.getValue());
            }
        }
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<ClassDeclaration> list = JavaQueries.grabats09(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosGraphQueryList.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);/*from  w w  w .ja  va 2s .c om*/
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option optFileOpt = OptionBuilder.create(OPTIONS_FILE);
    optFileOpt.setArgName("FILE");
    optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource");
    optFileOpt.setArgs(1);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(optFileOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME,
                new BlueprintsPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosGraphQueryList.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap()
                .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();

        if (commandLine.hasOption(OPTIONS_FILE)) {
            Properties properties = new Properties();
            properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE))));
            for (final Entry<Object, Object> entry : properties.entrySet()) {
                loadOpts.put((String) entry.getKey(), (String) entry.getValue());
            }
        }
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<MethodDeclaration> list = JavaQueries.getUnusedMethodsList(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO, MessageFormat.format("Query result (list) contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosGraphQueryLoop.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);//from w w  w  . j a  va  2  s  .c o m
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option optFileOpt = OptionBuilder.create(OPTIONS_FILE);
    optFileOpt.setArgName("FILE");
    optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource");
    optFileOpt.setArgs(1);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(optFileOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME,
                new BlueprintsPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosGraphQueryLoop.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap()
                .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();

        if (commandLine.hasOption(OPTIONS_FILE)) {
            Properties properties = new Properties();
            properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE))));
            for (final Entry<Object, Object> entry : properties.entrySet()) {
                loadOpts.put((String) entry.getKey(), (String) entry.getValue());
            }
        }
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<MethodDeclaration> list = JavaQueries.getUnusedMethodsLoop(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO,
                    MessageFormat.format("Query result (loops) contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosGraphQueryOrphanNonPrimitiveTypes.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);//www .j  a  v a  2 s.  c o m
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option optFileOpt = OptionBuilder.create(OPTIONS_FILE);
    optFileOpt.setArgName("FILE");
    optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource");
    optFileOpt.setArgs(1);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(optFileOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME,
                new BlueprintsPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosGraphQueryOrphanNonPrimitiveTypes.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap()
                .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();

        if (commandLine.hasOption(OPTIONS_FILE)) {
            Properties properties = new Properties();
            properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE))));
            for (final Entry<Object, Object> entry : properties.entrySet()) {
                loadOpts.put((String) entry.getKey(), (String) entry.getValue());
            }
        }
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<Type> list = JavaQueries.getOrphanNonPrimitivesTypes(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosGraphQueryUnusedMethodsList.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);/* w w w . j a  v  a  2s . c o  m*/
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option optFileOpt = OptionBuilder.create(OPTIONS_FILE);
    optFileOpt.setArgName("FILE");
    optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource");
    optFileOpt.setArgs(1);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(optFileOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME,
                new BlueprintsPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosGraphQueryUnusedMethodsList.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap()
                .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();

        if (commandLine.hasOption(OPTIONS_FILE)) {
            Properties properties = new Properties();
            properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE))));
            for (final Entry<Object, Object> entry : properties.entrySet()) {
                loadOpts.put((String) entry.getKey(), (String) entry.getValue());
            }
        }
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<MethodDeclaration> list = JavaQueries.getUnusedMethodsList(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:com.netflix.aegisthus.tools.SSTableExport.java

@SuppressWarnings("rawtypes")
public static void main(String[] args) throws IOException {
    String usage = String.format("Usage: %s <sstable>", SSTableExport.class.getName());

    CommandLineParser parser = new PosixParser();
    try {/*from w  w w .jav  a2  s .c  o  m*/
        cmd = parser.parse(options, args);
    } catch (ParseException e1) {
        System.err.println(e1.getMessage());
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(usage, options);
        System.exit(1);
    }

    if (cmd.getArgs().length != 1) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(usage, options);
        System.exit(1);
    }
    Map<String, AbstractType> convertors = null;
    if (cmd.hasOption(COLUMN_NAME_TYPE)) {
        try {
            convertors = new HashMap<String, AbstractType>();
            convertors.put(SSTableScanner.COLUMN_NAME_KEY,
                    TypeParser.parse(cmd.getOptionValue(COLUMN_NAME_TYPE)));
        } catch (ConfigurationException e) {
            System.err.println(e.getMessage());
            HelpFormatter formatter = new HelpFormatter();
            formatter.printHelp(usage, options);
            System.exit(1);
        } catch (SyntaxException e) {
            System.err.println(e.getMessage());
            HelpFormatter formatter = new HelpFormatter();
            formatter.printHelp(usage, options);
            System.exit(1);
        }
    }
    Descriptor.Version version = null;
    if (cmd.hasOption(OPT_VERSION)) {
        version = new Descriptor.Version(cmd.getOptionValue(OPT_VERSION));
    }

    if (cmd.hasOption(INDEX_SPLIT)) {
        String ssTableFileName;
        DataInput input = null;
        if ("-".equals(cmd.getArgs()[0])) {
            ssTableFileName = System.getProperty("aegisthus.file.name");
            input = new DataInputStream(new BufferedInputStream(System.in, 65536 * 10));
        } else {
            ssTableFileName = new File(cmd.getArgs()[0]).getAbsolutePath();
            input = new DataInputStream(
                    new BufferedInputStream(new FileInputStream(ssTableFileName), 65536 * 10));
        }
        exportIndexSplit(ssTableFileName, input);
    } else if (cmd.hasOption(INDEX)) {
        String ssTableFileName = new File(cmd.getArgs()[0]).getAbsolutePath();
        exportIndex(ssTableFileName);
    } else if (cmd.hasOption(ROWSIZE)) {
        String ssTableFileName = new File(cmd.getArgs()[0]).getAbsolutePath();
        exportRowSize(ssTableFileName);
    } else if ("-".equals(cmd.getArgs()[0])) {
        if (version == null) {
            System.err.println("when streaming must supply file version");
            HelpFormatter formatter = new HelpFormatter();
            formatter.printHelp(usage, options);
            System.exit(1);
        }
        exportStream(version);
    } else {
        String ssTableFileName = new File(cmd.getArgs()[0]).getAbsolutePath();
        FileInputStream fis = new FileInputStream(ssTableFileName);
        InputStream inputStream = new DataInputStream(new BufferedInputStream(fis, 65536 * 10));
        long end = -1;
        if (cmd.hasOption(END)) {
            end = Long.valueOf(cmd.getOptionValue(END));
        }
        if (cmd.hasOption(OPT_COMP)) {
            CompressionMetadata cm = new CompressionMetadata(
                    new BufferedInputStream(new FileInputStream(cmd.getOptionValue(OPT_COMP)), 65536),
                    fis.getChannel().size());
            inputStream = new CompressionInputStream(inputStream, cm);
            end = cm.getDataLength();
        }
        DataInputStream input = new DataInputStream(inputStream);
        if (version == null) {
            version = Descriptor.fromFilename(ssTableFileName).version;
        }
        SSTableScanner scanner = new SSTableScanner(input, convertors, end, version);
        if (cmd.hasOption(OPT_MAX_COLUMN_SIZE)) {
            scanner.setMaxColSize(Long.parseLong(cmd.getOptionValue(OPT_MAX_COLUMN_SIZE)));
        }
        export(scanner);
        if (cmd.hasOption(OPT_MAX_COLUMN_SIZE)) {
            if (scanner.getErrorRowCount() > 0) {
                System.err.println(String.format("%d rows were too large", scanner.getErrorRowCount()));
            }
        }
    }
}

From source file:de.prozesskraft.pkraft.Perlcode.java

public static void main(String[] args) throws org.apache.commons.cli.ParseException, IOException {

    //      try//ww  w .  j av  a 2s.c  o m
    //      {
    //         if (args.length != 3)
    //         {
    //            System.out.println("Please specify processdefinition file (xml) and an outputfilename");
    //         }
    //         
    //      }
    //      catch (ArrayIndexOutOfBoundsException e)
    //      {
    //         System.out.println("***ArrayIndexOutOfBoundsException: Please specify processdefinition.xml, openoffice_template.od*, newfile_for_processdefinitions.odt\n" + e.toString());
    //      }

    /*----------------------------
      get options from ini-file
    ----------------------------*/
    File inifile = new java.io.File(
            WhereAmI.getInstallDirectoryAbsolutePath(Perlcode.class) + "/" + "../etc/pkraft-perlcode.ini");

    if (inifile.exists()) {
        try {
            ini = new Ini(inifile);
        } catch (InvalidFileFormatException e1) {
            // TODO Auto-generated catch block
            e1.printStackTrace();
        } catch (IOException e1) {
            // TODO Auto-generated catch block
            e1.printStackTrace();
        }
    } else {
        System.err.println("ini file does not exist: " + inifile.getAbsolutePath());
        System.exit(1);
    }

    /*----------------------------
      create boolean options
    ----------------------------*/
    Option ohelp = new Option("help", "print this message");
    Option ov = new Option("v", "prints version and build-date");

    /*----------------------------
      create argument options
    ----------------------------*/
    Option ostep = OptionBuilder.withArgName("STEPNAME").hasArg().withDescription(
            "[optional] stepname of step to generate a script for. if this parameter is omitted, a script for the process will be generated.")
            //            .isRequired()
            .create("step");

    Option ooutput = OptionBuilder.withArgName("DIR").hasArg()
            .withDescription("[mandatory] directory for generated files. must not exist when calling.")
            //            .isRequired()
            .create("output");

    Option odefinition = OptionBuilder.withArgName("FILE").hasArg()
            .withDescription("[mandatory] process definition file.")
            //            .isRequired()
            .create("definition");

    Option onolist = OptionBuilder.withArgName("")
            //            .hasArg()
            .withDescription(
                    "[optional] with this parameter the multiple use of multi-optionis is forced. otherwise it is possible to use an integrated comma-separeated list.")
            //            .isRequired()
            .create("nolist");

    /*----------------------------
      create options object
    ----------------------------*/
    Options options = new Options();

    options.addOption(ohelp);
    options.addOption(ov);
    options.addOption(ostep);
    options.addOption(ooutput);
    options.addOption(odefinition);
    options.addOption(onolist);

    /*----------------------------
      create the parser
    ----------------------------*/
    CommandLineParser parser = new GnuParser();
    try {
        // parse the command line arguments
        commandline = parser.parse(options, args);
    } catch (Exception exp) {
        // oops, something went wrong
        System.err.println("Parsing failed. Reason: " + exp.getMessage());
        exiter();
    }

    /*----------------------------
      usage/help
    ----------------------------*/
    if (commandline.hasOption("help")) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("perlcode", options);
        System.exit(0);
    }

    else if (commandline.hasOption("v")) {
        System.out.println("web:     www.prozesskraft.de");
        System.out.println("version: [% version %]");
        System.out.println("date:    [% date %]");
        System.exit(0);
    }

    /*----------------------------
      ueberpruefen ob eine schlechte kombination von parametern angegeben wurde
    ----------------------------*/
    if (!(commandline.hasOption("definition"))) {
        System.err.println("option -definition is mandatory.");
        exiter();
    }

    if (!(commandline.hasOption("output"))) {
        System.err.println("option -output is mandatory.");
        exiter();
    }

    /*----------------------------
      die lizenz ueberpruefen und ggf abbrechen
    ----------------------------*/

    // check for valid license
    ArrayList<String> allPortAtHost = new ArrayList<String>();
    allPortAtHost.add(ini.get("license-server", "license-server-1"));
    allPortAtHost.add(ini.get("license-server", "license-server-2"));
    allPortAtHost.add(ini.get("license-server", "license-server-3"));

    MyLicense lic = new MyLicense(allPortAtHost, "1", "user-edition", "0.1");

    // lizenz-logging ausgeben
    for (String actLine : (ArrayList<String>) lic.getLog()) {
        System.err.println(actLine);
    }

    // abbruch, wenn lizenz nicht valide
    if (!lic.isValid()) {
        System.exit(1);
    }

    /*----------------------------
      die eigentliche business logic
    ----------------------------*/
    Process p1 = new Process();
    java.io.File outputDir = new java.io.File(commandline.getOptionValue("output"));
    java.io.File outputDirProcessScript = new java.io.File(commandline.getOptionValue("output"));
    java.io.File outputDirBin = new java.io.File(commandline.getOptionValue("output") + "/bin");
    java.io.File outputDirLib = new java.io.File(commandline.getOptionValue("output") + "/lib");
    boolean nolist = false;
    if (commandline.hasOption("nolist")) {
        nolist = true;
    }

    if (outputDir.exists()) {
        System.err.println("fatal: directory already exists: " + outputDir.getCanonicalPath());
        exiter();
    } else {
        outputDir.mkdir();
    }

    p1.setInfilexml(commandline.getOptionValue("definition"));
    System.err.println("info: reading process definition " + commandline.getOptionValue("definition"));
    Process p2 = null;
    try {
        p2 = p1.readXml();
    } catch (JAXBException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
        System.err.println("error");
        exiter();
    }

    // perlcode generieren fuer einen bestimmten step
    if (commandline.hasOption("step")) {
        outputDirBin.mkdir();
        String stepname = commandline.getOptionValue("step");
        writeStepAsPerlcode(p2, stepname, outputDirBin, nolist);
    }

    // perlcode generieren fuer den gesamten process
    else {
        outputDirBin.mkdir();
        writeProcessAsPerlcode(p2, outputDirProcessScript, outputDirBin, nolist);

        // copy all perllibs from the lib directory
        outputDirLib.mkdir();
        final Path source = Paths.get(WhereAmI.getInstallDirectoryAbsolutePath(Perlcode.class) + "/../perllib");
        final Path target = Paths.get(outputDirLib.toURI());

        copyDirectoryTree.copyDirectoryTree(source, target);
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosGraphQueryThrownExceptionsPerPackage.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);//from ww  w  .j  av a  2  s  . c om
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option optFileOpt = OptionBuilder.create(OPTIONS_FILE);
    optFileOpt.setArgName("FILE");
    optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource");
    optFileOpt.setArgs(1);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(optFileOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME,
                new BlueprintsPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosGraphQueryThrownExceptionsPerPackage.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap()
                .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();

        if (commandLine.hasOption(OPTIONS_FILE)) {
            Properties properties = new Properties();
            properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE))));
            for (final Entry<Object, Object> entry : properties.entrySet()) {
                loadOpts.put((String) entry.getKey(), (String) entry.getValue());
            }
        }
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            HashMap<String, EList<TypeAccess>> list = JavaQueries.getThrownExceptionsPerPackage(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}