Example usage for org.apache.commons.cli HelpFormatter printHelp

List of usage examples for org.apache.commons.cli HelpFormatter printHelp

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Introduction

In this page you can find the example usage for org.apache.commons.cli HelpFormatter printHelp.

Prototype

public void printHelp(String cmdLineSyntax, Options options, boolean autoUsage)

Source Link

Document

Print the help for options with the specified command line syntax.

Usage

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosMapQuery.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);/*from  w ww.  j  a  v a  2 s  .  c  o m*/
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoMapURI.NEO_MAP_SCHEME,
                new MapPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoMapURI.createNeoMapURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosMapQuery.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap().put(NeoMapURI.NEO_MAP_SCHEME,
                PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<MethodDeclaration> list = JavaQueries.getUnusedMethodsList(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO, MessageFormat.format("Query result (list) contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<MethodDeclaration> list = JavaQueries.getUnusedMethodsLoop(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO,
                    MessageFormat.format("Query result (loops) contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.Migrator.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input file");
    inputOpt.setArgs(1);/* w w w. j  a  va  2 s  .c o m*/
    inputOpt.setRequired(true);

    Option outputOpt = OptionBuilder.create(OUT);
    outputOpt.setArgName("OUTPUT");
    outputOpt.setDescription("Output file");
    outputOpt.setArgs(1);
    outputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(IN_EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of input EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option outClassOpt = OptionBuilder.create(OUT_EPACKAGE_CLASS);
    outClassOpt.setArgName("CLASS");
    outClassOpt.setDescription("FQN of output EPackage implementation class");
    outClassOpt.setArgs(1);
    outClassOpt.setRequired(true);

    options.addOption(inputOpt);
    options.addOption(outputOpt);
    options.addOption(inClassOpt);
    options.addOption(outClassOpt);

    CommandLineParser parser = new PosixParser();

    try {
        CommandLine commandLine = parser.parse(options, args);
        URI sourceUri = URI.createFileURI(commandLine.getOptionValue(IN));
        URI targetUri = URI.createFileURI(commandLine.getOptionValue(OUT));
        Class<?> inClazz = Migrator.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(IN_EPACKAGE_CLASS));
        Class<?> outClazz = Migrator.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(OUT_EPACKAGE_CLASS));

        @SuppressWarnings("unused")
        EPackage inEPackage = (EPackage) inClazz.getMethod("init").invoke(null);
        EPackage outEPackage = (EPackage) outClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getExtensionToFactoryMap().put("xmi",
                new XMIResourceFactoryImpl());
        resourceSet.getResourceFactoryRegistry().getExtensionToFactoryMap().put("zxmi",
                new XMIResourceFactoryImpl());

        Resource sourceResource = resourceSet.getResource(sourceUri, true);
        Resource targetResource = resourceSet.createResource(targetUri);

        targetResource.getContents().clear();
        LOG.log(Level.INFO, "Start migration");
        targetResource.getContents()
                .add(MigratorUtil.migrate(sourceResource.getContents().get(0), outEPackage));
        LOG.log(Level.INFO, "Migration finished");

        Map<String, Object> saveOpts = new HashMap<String, Object>();
        saveOpts.put(XMIResource.OPTION_ZIP, Boolean.TRUE);
        LOG.log(Level.INFO, "Start saving");
        targetResource.save(saveOpts);
        LOG.log(Level.INFO, "Saving done");
    } catch (ParseException e) {
        showError(e.toString());
        showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        showError(e.toString());
    }
}

From source file:com.cws.esolutions.core.main.EmailUtility.java

public static final void main(final String[] args) {
    final String methodName = EmailUtility.CNAME + "#main(final String[] args)";

    if (DEBUG) {/*  w  ww.j  a  v  a  2s . c  o  m*/
        DEBUGGER.debug(methodName);
        DEBUGGER.debug("Value: {}", (Object) args);
    }

    if (args.length == 0) {
        HelpFormatter usage = new HelpFormatter();
        usage.printHelp(EmailUtility.CNAME, options, true);

        return;
    }

    try {
        CommandLineParser parser = new PosixParser();
        CommandLine commandLine = parser.parse(options, args);

        URL xmlURL = null;
        JAXBContext context = null;
        Unmarshaller marshaller = null;
        CoreConfigurationData configData = null;

        xmlURL = FileUtils.getFile(commandLine.getOptionValue("config")).toURI().toURL();
        context = JAXBContext.newInstance(CoreConfigurationData.class);
        marshaller = context.createUnmarshaller();
        configData = (CoreConfigurationData) marshaller.unmarshal(xmlURL);

        EmailMessage message = new EmailMessage();
        message.setMessageTo(new ArrayList<String>(Arrays.asList(commandLine.getOptionValues("to"))));
        message.setMessageSubject(commandLine.getOptionValue("subject"));
        message.setMessageBody((String) commandLine.getArgList().get(0));
        message.setEmailAddr((StringUtils.isNotEmpty(commandLine.getOptionValue("from")))
                ? new ArrayList<String>(Arrays.asList(commandLine.getOptionValue("from")))
                : new ArrayList<String>(Arrays.asList(configData.getMailConfig().getMailFrom())));

        if (DEBUG) {
            DEBUGGER.debug("EmailMessage: {}", message);
        }

        try {
            EmailUtils.sendEmailMessage(configData.getMailConfig(), message, false);
        } catch (MessagingException mx) {
            System.err.println(
                    "An error occurred while sending the requested message. Exception: " + mx.getMessage());
        }
    } catch (ParseException px) {
        px.printStackTrace();
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(EmailUtility.CNAME, options, true);
    } catch (MalformedURLException mx) {
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp(EmailUtility.CNAME, options, true);
    } catch (JAXBException jx) {
        jx.printStackTrace();
        System.err.println("An error occurred while loading the provided configuration file. Cannot continue.");
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.ase2015.CdoQueryGrabats09.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input CDO resource directory");
    inputOpt.setArgs(1);/*from   ww w. j  av  a 2s  .c o  m*/
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option repoOpt = OptionBuilder.create(REPO_NAME);
    repoOpt.setArgName("REPO_NAME");
    repoOpt.setDescription("CDO Repository name");
    repoOpt.setArgs(1);
    repoOpt.setRequired(true);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(repoOpt);

    CommandLineParser parser = new PosixParser();

    try {
        CommandLine commandLine = parser.parse(options, args);

        String repositoryDir = commandLine.getOptionValue(IN);
        String repositoryName = commandLine.getOptionValue(REPO_NAME);

        Class<?> inClazz = CdoQueryGrabats09.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        EmbeddedCDOServer server = new EmbeddedCDOServer(repositoryDir, repositoryName);
        try {
            server.run();
            CDOSession session = server.openSession();
            CDOTransaction transaction = session.openTransaction();
            Resource resource = transaction.getRootResource();

            {
                Runtime.getRuntime().gc();
                long initialUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory();
                LOG.log(Level.INFO, MessageFormat.format("Used memory before query: {0}",
                        MessageUtil.byteCountToDisplaySize(initialUsedMemory)));
                LOG.log(Level.INFO, "Start query");
                long begin = System.currentTimeMillis();
                EList<ClassDeclaration> list = ASE2015JavaQueries.grabats09(resource);
                long end = System.currentTimeMillis();
                LOG.log(Level.INFO, "End query");
                LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size()));
                LOG.log(Level.INFO,
                        MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
                Runtime.getRuntime().gc();
                long finalUsedMemory = Runtime.getRuntime().totalMemory() - Runtime.getRuntime().freeMemory();
                LOG.log(Level.INFO, MessageFormat.format("Used memory after query: {0}",
                        MessageUtil.byteCountToDisplaySize(finalUsedMemory)));
                LOG.log(Level.INFO, MessageFormat.format("Memory use increase: {0}",
                        MessageUtil.byteCountToDisplaySize(finalUsedMemory - initialUsedMemory)));
            }

            transaction.close();
            session.close();
        } finally {
            server.stop();
        }
    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:com.act.lcms.db.io.LoadConstructAnalysisTableIntoDB.java

public static void main(String[] args) throws Exception {
    Options opts = new Options();
    opts.addOption(Option.builder("i").argName("path").desc("The TSV file to read").hasArg().required()
            .longOpt("input-file").build());

    // DB connection options.
    opts.addOption(Option.builder().argName("database url")
            .desc("The url to use when connecting to the LCMS db").hasArg().longOpt("db-url").build());
    opts.addOption(Option.builder("u").argName("database user").desc("The LCMS DB user").hasArg()
            .longOpt("db-user").build());
    opts.addOption(Option.builder("p").argName("database password").desc("The LCMS DB password").hasArg()
            .longOpt("db-pass").build());
    opts.addOption(Option.builder("H").argName("database host")
            .desc(String.format("The LCMS DB host (default = %s)", DB.DEFAULT_HOST)).hasArg().longOpt("db-host")
            .build());//from w w  w.j a  va2  s .  c  o m
    opts.addOption(Option.builder("P").argName("database port")
            .desc(String.format("The LCMS DB port (default = %d)", DB.DEFAULT_PORT)).hasArg().longOpt("db-port")
            .build());
    opts.addOption(Option.builder("N").argName("database name")
            .desc(String.format("The LCMS DB name (default = %s)", DB.DEFAULT_DB_NAME)).hasArg()
            .longOpt("db-name").build());

    // Everybody needs a little help from their friends.
    opts.addOption(
            Option.builder("h").argName("help").desc("Prints this help message").longOpt("help").build());

    CommandLine cl = null;
    try {
        CommandLineParser parser = new DefaultParser();
        cl = parser.parse(opts, args);
    } catch (ParseException e) {
        System.err.format("Argument parsing failed: %s\n", e.getMessage());
        HelpFormatter fmt = new HelpFormatter();
        fmt.printHelp(LoadConstructAnalysisTableIntoDB.class.getCanonicalName(), opts, true);
        System.exit(1);
    }

    if (cl.hasOption("help")) {
        new HelpFormatter().printHelp(LoadConstructAnalysisTableIntoDB.class.getCanonicalName(), opts, true);
        return;
    }

    File inputFile = new File(cl.getOptionValue("input-file"));
    if (!inputFile.exists()) {
        System.err.format("Unable to find input file at %s\n", cl.getOptionValue("input-file"));
        new HelpFormatter().printHelp(LoadConstructAnalysisTableIntoDB.class.getCanonicalName(), opts, true);
        System.exit(1);
    }

    DB db;

    if (cl.hasOption("db-url")) {
        db = new DB().connectToDB(cl.getOptionValue("db-url"));
    } else {
        Integer port = null;
        if (cl.getOptionValue("P") != null) {
            port = Integer.parseInt(cl.getOptionValue("P"));
        }
        db = new DB().connectToDB(cl.getOptionValue("H"), port, cl.getOptionValue("N"), cl.getOptionValue("u"),
                cl.getOptionValue("p"));
    }

    try {
        db.getConn().setAutoCommit(false);

        ConstructAnalysisFileParser parser = new ConstructAnalysisFileParser();
        parser.parse(inputFile);

        List<Pair<Integer, DB.OPERATION_PERFORMED>> results = ChemicalAssociatedWithPathway
                .insertOrUpdateChemicalsAssociatedWithPathwayFromParser(db, parser);
        if (results != null) {
            for (Pair<Integer, DB.OPERATION_PERFORMED> r : results) {
                System.out.format("%d: %s\n", r.getLeft(), r.getRight());
            }
        }
        // If we didn't encounter an exception, commit the transaction.
        db.getConn().commit();
    } catch (Exception e) {
        System.err.format("Caught exception when trying to load plate composition, rolling back. %s\n",
                e.getMessage());
        db.getConn().rollback();
        throw (e);
    } finally {
        db.getConn().close();
    }

}

From source file:fr.inria.atlanmod.kyanos.benchmarks.CdoQuery.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input CDO resource directory");
    inputOpt.setArgs(1);/*from  w w  w.ja  v a  2 s  .c om*/
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option repoOpt = OptionBuilder.create(REPO_NAME);
    repoOpt.setArgName("REPO_NAME");
    repoOpt.setDescription("CDO Repository name");
    repoOpt.setArgs(1);
    repoOpt.setRequired(true);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(repoOpt);

    CommandLineParser parser = new PosixParser();

    try {
        CommandLine commandLine = parser.parse(options, args);

        String repositoryDir = commandLine.getOptionValue(IN);
        String repositoryName = commandLine.getOptionValue(REPO_NAME);

        Class<?> inClazz = CdoQuery.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        EmbeddedCDOServer server = new EmbeddedCDOServer(repositoryDir, repositoryName);
        try {
            server.run();
            CDOSession session = server.openSession();
            CDOTransaction transaction = session.openTransaction();
            Resource resource = transaction.getRootResource();

            {
                LOG.log(Level.INFO, "Start query");
                long begin = System.currentTimeMillis();
                EList<MethodDeclaration> list = JavaQueries.getUnusedMethodsList(resource);
                long end = System.currentTimeMillis();
                LOG.log(Level.INFO, "End query");
                LOG.log(Level.INFO,
                        MessageFormat.format("Query result (list) contains {0} elements", list.size()));
                LOG.log(Level.INFO,
                        MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
            }

            {
                LOG.log(Level.INFO, "Start query");
                long begin = System.currentTimeMillis();
                EList<MethodDeclaration> list = JavaQueries.getUnusedMethodsLoop(resource);
                long end = System.currentTimeMillis();
                LOG.log(Level.INFO, "End query");
                LOG.log(Level.INFO,
                        MessageFormat.format("Query result (loops) contains {0} elements", list.size()));
                LOG.log(Level.INFO,
                        MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
            }

            transaction.close();
            session.close();
        } finally {
            server.stop();
        }
    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.ReferencesCounter.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input file");
    inputOpt.setArgs(1);//from www .  ja  va2 s. co  m
    inputOpt.setRequired(true);

    Option outputOpt = OptionBuilder.create(OUT);
    outputOpt.setArgName("OUTPUT");
    outputOpt.setDescription("Output file");
    outputOpt.setArgs(1);
    outputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(IN_EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of input EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option labelOpt = OptionBuilder.create(LABEL);
    labelOpt.setArgName("LABEL");
    labelOpt.setDescription("Label for the data set");
    labelOpt.setArgs(1);
    labelOpt.setRequired(true);

    options.addOption(inputOpt);
    options.addOption(outputOpt);
    options.addOption(inClassOpt);
    options.addOption(labelOpt);

    CommandLineParser parser = new PosixParser();

    try {
        CommandLine commandLine = parser.parse(options, args);
        URI sourceUri = URI.createFileURI(commandLine.getOptionValue(IN));
        Class<?> inClazz = ReferencesCounter.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(IN_EPACKAGE_CLASS));
        @SuppressWarnings("unused")
        EPackage inEPackage = (EPackage) inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getExtensionToFactoryMap().put("xmi",
                new XMIResourceFactoryImpl());
        resourceSet.getResourceFactoryRegistry().getExtensionToFactoryMap().put("zxmi",
                new XMIResourceFactoryImpl());

        Resource sourceResource = resourceSet.getResource(sourceUri, true);

        FileWriter writer = new FileWriter(new File(commandLine.getOptionValue(OUT)));
        try {
            writer.write(commandLine.getOptionValue(LABEL));
            writer.write("\n");

            for (Iterator<EObject> iterator = sourceResource.getAllContents(); iterator.hasNext();) {
                EObject eObject = iterator.next();
                for (EStructuralFeature feature : eObject.eClass().getEAllStructuralFeatures()) {
                    if (feature.isMany() && eObject.eIsSet(feature)) {
                        EList<?> value = (EList<?>) eObject.eGet(feature);
                        //                     if (value.size() > 10) 
                        writer.write(String.format("%d\n", value.size()));
                    }
                }
            }
        } finally {
            IOUtils.closeQuietly(writer);
        }

    } catch (ParseException e) {
        showError(e.toString());
        showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        showError(e.toString());
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosGraphQueryGrabats.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);//from  w w  w  .  ja v  a 2  s  . c  o m
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option optFileOpt = OptionBuilder.create(OPTIONS_FILE);
    optFileOpt.setArgName("FILE");
    optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource");
    optFileOpt.setArgs(1);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(optFileOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME,
                new BlueprintsPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosGraphQueryGrabats.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap()
                .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();

        if (commandLine.hasOption(OPTIONS_FILE)) {
            Properties properties = new Properties();
            properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE))));
            for (final Entry<Object, Object> entry : properties.entrySet()) {
                loadOpts.put((String) entry.getKey(), (String) entry.getValue());
            }
        }
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<ClassDeclaration> list = JavaQueries.grabats09(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosGraphQueryInvisibleMethodDeclarations.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);/*from w w w.  j a va  2 s.co  m*/
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option optFileOpt = OptionBuilder.create(OPTIONS_FILE);
    optFileOpt.setArgName("FILE");
    optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource");
    optFileOpt.setArgs(1);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(optFileOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME,
                new BlueprintsPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosGraphQueryInvisibleMethodDeclarations.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap()
                .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();

        if (commandLine.hasOption(OPTIONS_FILE)) {
            Properties properties = new Properties();
            properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE))));
            for (final Entry<Object, Object> entry : properties.entrySet()) {
                loadOpts.put((String) entry.getKey(), (String) entry.getValue());
            }
        }
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<MethodDeclaration> list = JavaQueries.getInvisibleMethodDeclarations(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO, MessageFormat.format("Query result contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}

From source file:fr.inria.atlanmod.kyanos.benchmarks.KyanosGraphQueryList.java

public static void main(String[] args) {
    Options options = new Options();

    Option inputOpt = OptionBuilder.create(IN);
    inputOpt.setArgName("INPUT");
    inputOpt.setDescription("Input Kyanos resource directory");
    inputOpt.setArgs(1);/*from w ww. j a va2 s  .c  o  m*/
    inputOpt.setRequired(true);

    Option inClassOpt = OptionBuilder.create(EPACKAGE_CLASS);
    inClassOpt.setArgName("CLASS");
    inClassOpt.setDescription("FQN of EPackage implementation class");
    inClassOpt.setArgs(1);
    inClassOpt.setRequired(true);

    Option optFileOpt = OptionBuilder.create(OPTIONS_FILE);
    optFileOpt.setArgName("FILE");
    optFileOpt.setDescription("Properties file holding the options to be used in the Kyanos Resource");
    optFileOpt.setArgs(1);

    options.addOption(inputOpt);
    options.addOption(inClassOpt);
    options.addOption(optFileOpt);

    CommandLineParser parser = new PosixParser();

    try {
        PersistenceBackendFactoryRegistry.getFactories().put(NeoBlueprintsURI.NEO_GRAPH_SCHEME,
                new BlueprintsPersistenceBackendFactory());

        CommandLine commandLine = parser.parse(options, args);

        URI uri = NeoBlueprintsURI.createNeoGraphURI(new File(commandLine.getOptionValue(IN)));

        Class<?> inClazz = KyanosGraphQueryList.class.getClassLoader()
                .loadClass(commandLine.getOptionValue(EPACKAGE_CLASS));
        inClazz.getMethod("init").invoke(null);

        ResourceSet resourceSet = new ResourceSetImpl();
        resourceSet.getResourceFactoryRegistry().getProtocolToFactoryMap()
                .put(NeoBlueprintsURI.NEO_GRAPH_SCHEME, PersistentResourceFactory.eINSTANCE);

        Resource resource = resourceSet.createResource(uri);

        Map<String, Object> loadOpts = new HashMap<String, Object>();

        if (commandLine.hasOption(OPTIONS_FILE)) {
            Properties properties = new Properties();
            properties.load(new FileInputStream(new File(commandLine.getOptionValue(OPTIONS_FILE))));
            for (final Entry<Object, Object> entry : properties.entrySet()) {
                loadOpts.put((String) entry.getKey(), (String) entry.getValue());
            }
        }
        resource.load(loadOpts);
        {
            LOG.log(Level.INFO, "Start query");
            long begin = System.currentTimeMillis();
            EList<MethodDeclaration> list = JavaQueries.getUnusedMethodsList(resource);
            long end = System.currentTimeMillis();
            LOG.log(Level.INFO, "End query");
            LOG.log(Level.INFO, MessageFormat.format("Query result (list) contains {0} elements", list.size()));
            LOG.log(Level.INFO, MessageFormat.format("Time spent: {0}", MessageUtil.formatMillis(end - begin)));
        }

        if (resource instanceof PersistentResourceImpl) {
            PersistentResourceImpl.shutdownWithoutUnload((PersistentResourceImpl) resource);
        } else {
            resource.unload();
        }

    } catch (ParseException e) {
        MessageUtil.showError(e.toString());
        MessageUtil.showError("Current arguments: " + Arrays.toString(args));
        HelpFormatter formatter = new HelpFormatter();
        formatter.printHelp("java -jar <this-file.jar>", options, true);
    } catch (Throwable e) {
        MessageUtil.showError(e.toString());
    }
}