Example usage for org.apache.commons.lang ArrayUtils toPrimitive

Introduction

In this page you can find the example usage for org.apache.commons.lang ArrayUtils toPrimitive.

Prototype

public static boolean[] toPrimitive(Boolean[] array) 

Source Link

Document

Converts an array of object Booleans to primitives.

Usage

From source file:ijfx.ui.plugin.overlay.OverlayPanel.java

protected XYChart.Series<Double, Double> getOverlayHistogram(Overlay overlay) {

    Timer timer = timerService.getTimer(this.getClass());
    timer.start();//from w  ww.  j  ava 2  s.c om
    Double[] valueList = statsService.getValueListFromImageDisplay(currentDisplay(), overlay);
    timer.elapsed("Getting the stats");
    SummaryStatistics sumup = new SummaryStatistics();
    for (Double v : valueList) {
        sumup.addValue(v);
    }
    timer.elapsed("Building the sumup");

    double min = sumup.getMin();
    double max = sumup.getMax();
    double range = max - min;
    int bins = 100;//new Double(max - min).intValue();

    EmpiricalDistribution distribution = new EmpiricalDistribution(bins);

    double[] values = ArrayUtils.toPrimitive(valueList);
    Arrays.parallelSort(values);
    distribution.load(values);

    timer.elapsed("Sort and distrubution repartition up");

    XYChart.Series<Double, Double> serie = new XYChart.Series<>();
    ArrayList<Data<Double, Double>> data = new ArrayList<>(bins);
    double k = min;
    for (SummaryStatistics st : distribution.getBinStats()) {
        data.add(new Data<Double, Double>(k, new Double(st.getN())));
        k += range / bins;
    }

    serie.getData().clear();
    serie.getData().addAll(data);
    timer.elapsed("Creating charts");
    return serie;
}

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From source file:io.pravega.controller.eventProcessor.impl.EventProcessorTest.java

@Test(timeout = 10000)
public void testEventProcessorWriter() throws ReinitializationRequiredException, CheckpointStoreException {
    int initialCount = 1;
    String systemName = "testSystem";
    String readerGroupName = "testReaderGroup";
    int[] input = { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 };
    EventStreamWriterMock<TestEvent> writer = new EventStreamWriterMock<>();

    CheckpointStore checkpointStore = CheckpointStoreFactory.createInMemoryStore();

    CheckpointConfig checkpointConfig = CheckpointConfig.builder().type(CheckpointConfig.Type.None).build();

    EventProcessorGroupConfig config = EventProcessorGroupConfigImpl.builder().eventProcessorCount(1)
            .readerGroupName(READER_GROUP).streamName(STREAM_NAME).checkpointConfig(checkpointConfig).build();

    createEventProcessorGroupConfig(initialCount);

    EventProcessorSystemImpl system = createMockSystem(systemName, PROCESS, SCOPE, createEventReaders(1, input),
            writer, readerGroupName);//from w w  w  . j  a  va 2s  . c o m

    EventProcessorConfig<TestEvent> eventProcessorConfig = EventProcessorConfig.<TestEvent>builder()
            .supplier(() -> new StartWritingEventProcessor(false, input)).serializer(new JavaSerializer<>())
            .decider((Throwable e) -> ExceptionHandler.Directive.Stop).config(config).build();

    // Create EventProcessorGroup.
    EventProcessorGroupImpl<TestEvent> group = (EventProcessorGroupImpl<TestEvent>) system
            .createEventProcessorGroup(eventProcessorConfig, checkpointStore);

    // Await until it is ready.
    group.awaitRunning();

    // By now, the events have been written to the Mock EventStreamWriter.
    Integer[] writerList = writer.getEventList().stream().map(TestEvent::getNumber).collect(Collectors.toList())
            .toArray(new Integer[input.length]);

    // Validate that events are correctly written.
    Assert.assertArrayEquals(input, ArrayUtils.toPrimitive(writerList));
}

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From source file:dk.dma.ais.view.rest.AisStoreResource.java

@GET
@Path("/history/kml")
@Produces(MEDIA_TYPE_KMZ)//from ww w  . j av  a2s  .  c  o m
public Response historyKml(@Context UriInfo info, @QueryParam("mmsi") List<Integer> mmsis) {
    Iterable<AisPacket> query = getHistory(info,
            ArrayUtils.toPrimitive(mmsis.toArray(new Integer[mmsis.size()])));
    return Response.ok().entity(
            StreamingUtil.createZippedStreamingOutput(query, AisPacketOutputSinks.newKmlSink(), "history.kml"))
            .type(MEDIA_TYPE_KMZ).build();
}

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From source file:net.maizegenetics.analysis.imputation.FILLINImputationAccuracy.java

private boolean matchChromosomes() {
    Chromosome[] unimpChr = this.unimp.chromosomes();
    Chromosome[] keyChr = this.maskKey.chromosomes();
    ArrayList<Integer> keepSites = new ArrayList<>();
    for (Chromosome chr : unimpChr) { //if any of the chromosomes in input do not exist in key, return false (which then masks proportion)
        if (Arrays.binarySearch(keyChr, chr) < 0)
            return false;
    }/*from   www.  j a va  2 s .c  om*/
    for (Chromosome chr : keyChr) { //keep sites on key that are on matching chromosomes
        if (Arrays.binarySearch(unimpChr, chr) > -1) {
            int[] startEnd = this.maskKey.firstLastSiteOfChromosome(chr);
            for (int site = startEnd[0]; site <= startEnd[1]; site++) {
                keepSites.add(site);
            }
        }
    }
    FilterGenotypeTable filter = FilterGenotypeTable.getInstance(this.maskKey,
            ArrayUtils.toPrimitive(keepSites.toArray(new Integer[keepSites.size()])));
    this.maskKey = filter;//GenotypeTableBuilder.getGenotypeCopyInstance(filter);//Change this back when GenotypeCopyInstance fixed
    if (verboseOutput)
        System.out.println(this.maskKey.numberOfSites() + " sites retained after chromsome filter");
    return true;
}

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From source file:gov.nih.nci.cabig.caaers.web.ae.AdverseEventReconciliationCommand.java

public void seralizeMapping() {
    AeMappingsDTO mappings = new AeMappingsDTO();
    List<Integer> rejectedExternal = new ArrayList<Integer>();
    for (AdverseEventDTO ae : getRejectedExternalAeList())
        rejectedExternal.add(ae.getId());
    mappings.setRejectedExternalAeIds(ArrayUtils.toPrimitive(rejectedExternal.toArray(new Integer[] {})));

    List<Integer> rejectedInternal = new ArrayList<Integer>();
    for (AdverseEventDTO ae : getRejectedInternalAeList())
        rejectedInternal.add(ae.getId());
    mappings.setRejectedInternalAeIds(ArrayUtils.toPrimitive(rejectedInternal.toArray(new Integer[] {})));
    List<AeMergeDTO> relations = new ArrayList<AeMergeDTO>();
    for (Map.Entry<AdverseEventDTO, AdverseEventDTO> entry : matchedAeMapping.entrySet()) {
        String key = entry.getKey().getId() + "_" + entry.getValue().getId();
        AeMergeDTO merge = new AeMergeDTO();
        merge.setInteralAeId(entry.getKey().getId());
        merge.setExternalAeId(entry.getValue().getId());
        relations.add(merge);/*w  w  w .  ja v a2s  .  co  m*/
        AdverseEventDTO ae = mergeMap.get(key);
        if (ae != null)
            merge.copyChanges(entry.getKey(), entry.getValue(), ae);
    }
    mappings.setRelations(relations.toArray(new AeMergeDTO[] {}));

    reportingPeriod.setOldAeMapping(AeMappingsDTO.seralize(mappings));
}

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From source file:com.opengamma.analytics.financial.model.volatility.smile.fitting.sabr.ForexSmileDeltaSurfaceDataBundleTest.java

@Test
public void testObject() {
    assertArrayEquals(FORWARDS, DATA.getForwards(), EPS);
    assertArrayEquals(EXPIRIES, DATA.getExpiries(), 0);
    final int n = DELTAS.length;
    for (int i = 0; i < EXPIRIES.length; i++) {
        final double[] rr = new double[n];
        final double[] s = new double[n];
        for (int j = 0; j < n; j++) {
            rr[j] = RR[j][i];// ww w  .j a v a2  s  . c o m
            s[j] = STRANGLE[j][i];
        }
        final SmileDeltaParameters cal = new SmileDeltaParameters(EXPIRIES[i], ATM[i], DELTAS, rr, s);
        assertArrayEquals(cal.getStrike(FORWARD_CURVE.getForward(EXPIRIES[i])), DATA.getStrikes()[i], EPS);
        assertArrayEquals(cal.getVolatility(), DATA.getVolatilities()[i], EPS);
    }
    assertEquals(FORWARD_CURVE, DATA.getForwardCurve());
    //   assertEquals(IS_CALL_DATA, DATA.isCallData());
    ForexSmileDeltaSurfaceDataBundle other = new ForexSmileDeltaSurfaceDataBundle(FORWARD_CURVE, EXPIRIES,
            DELTAS, ATM, RR, STRANGLE, IS_CALL_DATA);
    assertEquals(DATA, other);
    assertEquals(DATA.hashCode(), other.hashCode());
    other = new ForexSmileDeltaSurfaceDataBundle(FORWARD_CURVE, EXPIRIES, STRIKES, VOLS, IS_CALL_DATA);
    assertEquals(DATA, other);
    assertEquals(DATA.hashCode(), other.hashCode());
    other = new ForexSmileDeltaSurfaceDataBundle(FORWARDS, EXPIRIES, DELTAS, ATM, RR, STRANGLE, IS_CALL_DATA,
            INTERPOLATOR);
    assertArrayEquals(DATA.getExpiries(), other.getExpiries(), 0);
    for (int i = 0; i < EXPIRIES.length; i++) {
        assertArrayEquals(DATA.getStrikes()[i], other.getStrikes()[i], 0);
        assertArrayEquals(DATA.getVolatilities()[i], other.getVolatilities()[i], 0);
    }
    //  assertEquals(DATA.isCallData(), other.isCallData());
    assertArrayEquals(ArrayUtils.toPrimitive(DATA.getForwardCurve().getForwardCurve().getXData()),
            ArrayUtils.toPrimitive(other.getForwardCurve().getForwardCurve().getXData()), 0);
    assertArrayEquals(ArrayUtils.toPrimitive(DATA.getForwardCurve().getForwardCurve().getYData()),
            ArrayUtils.toPrimitive(other.getForwardCurve().getForwardCurve().getYData()), 0);
    assertEquals(((InterpolatedDoublesCurve) DATA.getForwardCurve().getForwardCurve()).getInterpolator(),
            ((InterpolatedDoublesCurve) other.getForwardCurve().getForwardCurve()).getInterpolator());
    final ForwardCurve otherCurve = new ForwardCurve(
            InterpolatedDoublesCurve.from(EXPIRIES, EXPIRIES, INTERPOLATOR));
    other = new ForexSmileDeltaSurfaceDataBundle(otherCurve, EXPIRIES, DELTAS, ATM, RR, STRANGLE, IS_CALL_DATA);
    assertFalse(DATA.equals(other));
    other = new ForexSmileDeltaSurfaceDataBundle(FORWARD_CURVE,
            new double[] { 7. / 365, 14 / 365., 21 / 365., 1 / 12., 3 / 12., 0.5, 0.75, 1, 5, 9 }, DELTAS, ATM,
            RR, STRANGLE, IS_CALL_DATA);
    assertFalse(DATA.equals(other));
    other = new ForexSmileDeltaSurfaceDataBundle(FORWARD_CURVE, EXPIRIES, new double[] { 0.15, 0.35 }, ATM, RR,
            STRANGLE, IS_CALL_DATA);
    assertFalse(DATA.equals(other));
    other = new ForexSmileDeltaSurfaceDataBundle(FORWARD_CURVE, EXPIRIES, DELTAS, FORWARDS, RR, STRANGLE,
            IS_CALL_DATA);
    assertFalse(DATA.equals(other));
    other = new ForexSmileDeltaSurfaceDataBundle(FORWARD_CURVE, EXPIRIES, DELTAS, ATM, STRANGLE, STRANGLE,
            IS_CALL_DATA);
    assertFalse(DATA.equals(other));
    other = new ForexSmileDeltaSurfaceDataBundle(FORWARD_CURVE, EXPIRIES, DELTAS, ATM, RR, RR, IS_CALL_DATA);
    assertFalse(DATA.equals(other));
    //    other = new ForexSmileDeltaSurfaceDataBundle(FORWARD_CURVE, EXPIRIES, DELTAS, ATM, RR, STRANGLE, !IS_CALL_DATA);
    //    assertFalse(DATA.equals(other));
}

---

From source file:gsn.msr.sensormap.datahub.ServiceSkeleton.java

private ArrayOfSensorData transformToSensorDataArray(String vsName, StringBuilder query,
        boolean is_binary_linked) {
    logger.debug("QUERY : " + query);
    ArrayOfSensorData toReturn = new ArrayOfSensorData();
    try {/*w ww  .  ja v  a 2 s  .  c o m*/
        DataEnumerator output = null;
        output = Main.getStorage(vsName).executeQuery(query, is_binary_linked);
        SensorData data = new SensorData();
        ArrayOfDateTime arrayOfDateTime = new ArrayOfDateTime();
        ArrayList<Double> sensor_readings = new ArrayList();
        while (output.hasMoreElements()) {
            StreamElement se = output.nextElement();
            Calendar timestamp = Calendar.getInstance();
            timestamp.setTimeInMillis(se.getTimeStamp());
            arrayOfDateTime.addDateTime(timestamp);
            sensor_readings.add(Double.parseDouble(se.getData()[0].toString()));
        }
        data.setSensorType(5);//Vector
        data.setDataType(1);// Generic
        data.setTimestamps(arrayOfDateTime);
        ArrayOfDouble arrayOfDouble = new ArrayOfDouble();
        arrayOfDouble.set_double(ArrayUtils.toPrimitive(sensor_readings.toArray(new Double[] {})));
        data.setData(arrayOfDouble);
        toReturn.addSensorData(data);
    } catch (SQLException e) {
        logger.error(e.getMessage(), e);
    }

    return toReturn;
}

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From source file:eionet.web.action.VocabularyFoldersActionBean.java

/**
 * Returns the expanded folder IDs and sets the correct expanded[] value.
 *
 * @return/*from www  . j  a  v a2 s . c o  m*/
 */
private int[] parseExpandedIds() {
    List<Integer> result = new ArrayList<Integer>();

    if (StringUtils.isNotEmpty(expanded)) {
        String[] expandedStrArr = StringUtils.split(expanded, ",");
        for (String s : expandedStrArr) {
            result.add(Integer.parseInt(s));
        }
    }
    if (expand) {
        result.add(folderId);
    } else {
        result.remove(Integer.valueOf(folderId));
    }

    expanded = StringUtils.join(result, ",");

    return ArrayUtils.toPrimitive(result.toArray(new Integer[result.size()]));
}

---

From source file:com.twineworks.kettle.ruby.step.RubyStepSyntaxHighlighter.java

void highlight(String title, StyledTextComp wText) {
    // set up lexer process
    script = wText.getText();/*  w w  w .j  av  a  2  s .  c  o m*/
    StyledText canvas = wText.getStyledText();
    initBytes();
    initLexer(title);

    // remember bounds of current token
    int leftTokenBorder = 0;
    int rightTokenBorder = 0;
    int token = 0;
    int previousToken = 0;
    int lastCommentEnd = 0;

    ArrayList<StyleRange> ranges = new ArrayList<>(200);
    ArrayList<Integer> intRanges = new ArrayList<>(400);

    try {

        boolean keepParsing = true;

        while (keepParsing) {

            /* take care of comments, which are stripped out by the lexer */
            int[] upcomingComment = null;
            while ((rightTokenBorder >= lastCommentEnd || rightTokenBorder == 0)
                    && (upcomingComment = getUpcomingCommentPos(rightTokenBorder)) != null) {
                leftTokenBorder = upcomingComment[0];
                rightTokenBorder = leftTokenBorder + upcomingComment[1];
                lastCommentEnd = rightTokenBorder;
                //          System.out.println("Found comment -> [" + leftTokenBorder + "," + rightTokenBorder + "]");
                ranges.add(tokenToStyleRange(TOKEN_COMMENT, null, previousToken));

                int start = charOffset(leftTokenBorder);
                int count = charOffset(rightTokenBorder) - start;

                intRanges.add(start);
                intRanges.add(count);
            }

            /* read language syntax */
            int oldOffset = lexerOffset();
            previousToken = token;
            token = lexer.nextToken();
            keepParsing = !lexer.eofp;

            if (token > 0 && token != 10) {

                Object v = lexer.value();

                leftTokenBorder = oldOffset;
                if (leftTokenBorder < lastCommentEnd && lexerOffset() > lastCommentEnd) {
                    leftTokenBorder = lastCommentEnd;
                }
                rightTokenBorder = lexerOffset();

                //          System.out.println("Found token " + token + " -> " + lexer.value() + " [" + leftTokenBorder + "," + rightTokenBorder + "]");

                ranges.add(tokenToStyleRange(token, v, previousToken));
                int start = charOffset(leftTokenBorder);
                int count = charOffset(rightTokenBorder) - start;
                intRanges.add(start);
                intRanges.add(count);
            }

        }

        // don't mind anything that might go wrong during parsing
    } catch (SyntaxException e) {
        // apply the latest style to the rest of the file in case there is a syntax error
        if (ranges.size() > 0) {
            ranges.remove(ranges.size() - 1);
            intRanges.remove(intRanges.size() - 1);
            intRanges.remove(intRanges.size() - 1);
        }
        ranges.add(tokenToStyleRange(token, null, previousToken));
        int start = charOffset(leftTokenBorder);
        intRanges.add(start);
        intRanges.add(script.length() - start);

    } catch (Exception ignored) {
        // the lexer will sometimes throw a non-syntax exception when confronted with malformed input
        //      ignored.printStackTrace();
    }

    // don't mind swt errors in case some unforeseen input brought the style ranges out of order
    try {
        canvas.setStyleRanges(ArrayUtils.toPrimitive(intRanges.toArray(new Integer[0])),
                ranges.toArray(new StyleRange[0]));
    } catch (Exception e) {
        //      e.printStackTrace();
    }

}

---

From source file:com.ec.android.module.bluetooth40.base.BaseBluetoothControlWithProtocolActivity.java

protected void writeContent(Byte[] bytes) {
    writeContent(new String(ArrayUtils.toPrimitive(bytes)));
}

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