Example usage for org.apache.commons.lang ArrayUtils toPrimitive

Introduction

In this page you can find the example usage for org.apache.commons.lang ArrayUtils toPrimitive.

Prototype

public static boolean[] toPrimitive(Boolean[] array) 

Source Link

Document

Converts an array of object Booleans to primitives.

Usage

From source file:org.neo4j.nlp.impl.util.VectorUtil.java

public static double getFeatureMatchDistribution(GraphDatabaseService db, Long patternId) {
    Transaction tx = db.beginTx();//  w  w  w . j a  v  a 2s. c o m
    Node startNode = db.getNodeById(patternId);

    // Feature match distribution
    List<Double> matches = IteratorUtil
            .asCollection(db.traversalDescription().depthFirst()
                    .relationships(withName("HAS_CLASS"), Direction.OUTGOING).evaluator(Evaluators.fromDepth(1))
                    .evaluator(Evaluators.toDepth(1)).traverse(startNode).relationships())
            .stream().map(p -> ((Integer) p.getProperty("matches")).doubleValue()).collect(Collectors.toList());

    tx.success();
    tx.close();

    double variance = 1.0;

    if (matches.size() > 1) {
        Double[] matchArr = matches.toArray(new Double[matches.size()]);
        // Get the standard deviation
        DescriptiveStatistics ds = new DescriptiveStatistics();
        matches.forEach(m -> ds.addValue(m.doubleValue() / StatUtils.sum(ArrayUtils.toPrimitive(matchArr))));
        variance = ds.getStandardDeviation();
    }

    return variance;
}

---

From source file:org.nuxeo.ecm.platform.convert.ooomanager.OOoManagerComponent.java

@Override
public void startOOoManager() throws IOException {
    DefaultOfficeManagerConfiguration configuration = new DefaultOfficeManagerConfiguration();

    starting = true;//  w w  w  . j  a  v  a2  s .com

    try {
        // Properties configuration
        String connectionProtocol = Framework.getProperty(CONNECTION_PROTOCOL_PROPERTY_KEY);
        if (connectionProtocol != null && !"".equals(connectionProtocol)) {
            if (OfficeConnectionProtocol.PIPE.toString().equals(connectionProtocol)) {
                ConfigBuilderHelper.hackClassLoader();
                configuration.setConnectionProtocol(OfficeConnectionProtocol.PIPE);
            } else if (OfficeConnectionProtocol.SOCKET.toString().equals(connectionProtocol)) {
                configuration.setConnectionProtocol(OfficeConnectionProtocol.SOCKET);
            }
        }
        String maxTasksPerProcessProperty = Framework.getProperty(MAX_TASKS_PER_PROCESS_PROPERTY_KEY);
        if (maxTasksPerProcessProperty != null && !"".equals(maxTasksPerProcessProperty)) {
            Integer maxTasksPerProcess = Integer.valueOf(maxTasksPerProcessProperty);
            configuration.setMaxTasksPerProcess(maxTasksPerProcess);
        }
        String officeHome = Framework.getProperty(OFFICE_HOME_PROPERTY_KEY);
        if (officeHome != null && !"".equals(officeHome)) {
            configuration.setOfficeHome(officeHome);
        }

        String taskExecutionTimeoutProperty = Framework.getProperty(TASK_EXECUTION_TIMEOUT_PROPERTY_KEY);
        if (taskExecutionTimeoutProperty != null && !"".equals(taskExecutionTimeoutProperty)) {
            Long taskExecutionTimeout = Long.valueOf(taskExecutionTimeoutProperty);
            configuration.setTaskExecutionTimeout(taskExecutionTimeout);
        }
        String taskQueueTimeoutProperty = Framework.getProperty(TASK_QUEUE_TIMEOUT_PROPERTY_KEY);
        if (taskQueueTimeoutProperty != null && !"".equals(taskQueueTimeoutProperty)) {
            Long taskQueueTimeout = Long.valueOf(taskQueueTimeoutProperty);
            configuration.setTaskQueueTimeout(taskQueueTimeout);
        }
        String templateProfileDir = Framework.getProperty(TEMPLATE_PROFILE_DIR_PROPERTY_KEY);
        if (templateProfileDir != null && !"".equals(templateProfileDir)) {
            File templateDirectory = new File(templateProfileDir);
            if (!templateDirectory.exists()) {
                try {
                    FileUtils.forceMkdir(templateDirectory);
                } catch (IOException e) {
                    throw new RuntimeException("I/O Error: could not create JOD templateDirectory");
                }
            }
            configuration.setTemplateProfileDir(templateDirectory);
        }

        // Descriptor configuration
        String pipeNamesProperty = Framework.getProperty(OFFICE_PIPES_PROPERTY_KEY);
        String[] pipeNames = null;
        if (pipeNamesProperty != null) {
            String[] unvalidatedPipeNames = pipeNamesProperty.split(",\\s*");
            ArrayList<String> validatedPipeNames = new ArrayList<>();
            // Basic validation to avoid empty strings
            for (int i = 0; i < unvalidatedPipeNames.length; i++) {
                String tmpPipeName = unvalidatedPipeNames[i].trim();
                if (tmpPipeName.length() > 0) {
                    validatedPipeNames.add(tmpPipeName);
                }
            }
            pipeNames = validatedPipeNames.toArray(new String[0]);
        } else {
            pipeNames = descriptor.getPipeNames();
        }
        if (pipeNames != null && pipeNames.length != 0) {
            configuration.setPipeNames(pipeNames);
        }
        String portNumbersProperty = Framework.getProperty(OFFICE_PORTS_PROPERTY_KEY);
        int[] portNumbers = null;
        if (portNumbersProperty != null) {
            String[] portStrings = portNumbersProperty.split(",\\s*");
            ArrayList<Integer> portList = new ArrayList<>();
            for (int i = 0; i < portStrings.length; i++) {
                try {
                    portList.add(Integer.parseInt(portStrings[i].trim()));
                } catch (NumberFormatException e) {
                    log.error("Ignoring malformed port number: " + portStrings[i]);
                }
            }
            portNumbers = ArrayUtils.toPrimitive(portList.toArray(new Integer[0]));
        } else {
            portNumbers = descriptor.getPortNumbers();
        }
        if (portNumbers != null && portNumbers.length != 0) {
            configuration.setPortNumbers(portNumbers);
        }
        try {
            officeManager = configuration.buildOfficeManager();
            officeManager.start();
            started = true;
            log.debug("Starting ooo manager.");
        } catch (IllegalStateException | OfficeException e) {
            started = false;
            Throwable t = unwrapException(e);
            log.warn("OpenOffice was not found, JOD Converter " + "won't be available: " + t.getMessage());
        }
    } finally {
        starting = false;
    }
}

---

From source file:org.opendaylight.openflowplugin.outputtest.OutputTestCommandProvider.java

public void _sendPacketOutputMsg(CommandInterpreter ci) {
    /* Sending package OUT with action */
    LOG.debug("SendOutMsgWithAction");
    if (sessionInitiated) {
        String inNodeKey = ci.nextArgument();
        String inPort = ci.nextArgument();
        String outPort = "0xfffffffd";

        ArrayList<Byte> _arrayList = new ArrayList<Byte>(40);
        ArrayList<Byte> list = _arrayList;
        String _string = new String("sendOutputMsg_TEST");
        byte[] msg = _string.getBytes();
        int index = 0;
        for (final byte b : msg) {
            {/*from w  w w  .  j  av a2s . c om*/
                list.add(Byte.valueOf(b));
                boolean _lessThan = (index < 7);
                if (_lessThan) {
                    int _plus = (index + 1);
                    index = _plus;
                } else {
                    index = 0;
                }
            }
        }
        boolean _lessThan = (index < 8);
        boolean _while = _lessThan;
        while (_while) {
            {
                Byte _byte = new Byte("0");
                list.add(_byte);
                int _plus = (index + 1);
                index = _plus;
            }
            boolean _lessThan_1 = (index < 8);
            _while = _lessThan_1;
        }
        NodeRef ref = OutputTestUtil.createNodeRef(inNodeKey);

        TransmitPacketInputBuilder packet_out = new TransmitPacketInputBuilder();

        NodeConnectorRef _createNodeConnRef_1 = OutputTestUtil.createNodeConnRef(inNodeKey, inPort);
        NodeConnectorRef _nodeConnectorRef_1 = new NodeConnectorRef(_createNodeConnRef_1);
        NodeConnectorRef nIngressConRef = _nodeConnectorRef_1;

        NodeConnectorRef _createNodeConnRef_2 = OutputTestUtil.createNodeConnRef(inNodeKey, outPort);
        NodeConnectorRef _nodeConnectorRef_2 = new NodeConnectorRef(_createNodeConnRef_2);
        NodeConnectorRef nEngressConRef = _nodeConnectorRef_2;

        final ArrayList<Byte> _converted_list = list;
        byte[] _primitive = ArrayUtils
                .toPrimitive(((Byte[]) Conversions.unwrapArray(_converted_list, Byte.class)));

        List<Action> actionList = new ArrayList<Action>();
        ActionBuilder ab = new ActionBuilder();

        OutputActionBuilder output = new OutputActionBuilder();
        output.setMaxLength(new Integer(0xffff));
        Uri value = new Uri(OutputPortValues.CONTROLLER.toString());
        output.setOutputNodeConnector(value);
        ab.setAction(new OutputActionCaseBuilder().setOutputAction(output.build()).build());
        ab.setOrder(0);
        ab.setKey(new ActionKey(0));
        actionList.add(ab.build());

        packet_out.setCookie(null);
        packet_out.setAction(actionList);
        packet_out.setPayload(_primitive);
        packet_out.setNode(ref);
        packet_out.setIngress(nIngressConRef);
        packet_out.setEgress(nEngressConRef);
        packet_out.setBufferId(new Long(0xffffffffL));

        packetProcessingService.transmitPacket(packet_out.build());
    } else {
        ci.println("Session not initiated, try again in a few seconds");
    }
}

---

From source file:org.opendaylight.openflowplugin.outputtest.OutputTestUtil.java

public static TransmitPacketInput buildTransmitInputPacket(final String nodeId, final String outPort,
        final String inPort) {
    List<Byte> list = new ArrayList<Byte>(40);
    byte[] msg = OUTPUT_MSG.getBytes();

    int index = 0;
    for (byte b : msg) {
        list.add(b);/*from  w ww  . ja v a  2 s. c o m*/
        index = index < 7 ? index + 1 : 0;
    }

    while (index < 8) {
        list.add((byte) 0);
        index++;
    }
    NodeRef ref = createNodeRef(nodeId);
    NodeConnectorRef nEgressConfRef = new NodeConnectorRef(createNodeConnRef(nodeId, outPort));

    NodeConnectorRef nIngressConRef = new NodeConnectorRef(createNodeConnRef(nodeId, inPort));

    TransmitPacketInputBuilder tPackBuilder = new TransmitPacketInputBuilder();

    final List<Byte> convertedList = list;
    byte[] primitive = ArrayUtils.toPrimitive(convertedList.toArray(new Byte[0]));
    tPackBuilder.setPayload(primitive);

    tPackBuilder.setNode(ref);
    // TODO VD P2 missing cookies in Test
    tPackBuilder.setConnectionCookie(null);
    tPackBuilder.setEgress(nEgressConfRef);
    tPackBuilder.setIngress(nIngressConRef);
    return tPackBuilder.build();
}

---

From source file:org.openfact.common.converts.DocumentUtils.java

public static Document byteToDocument(Byte[] document) throws Exception {
    DocumentBuilderFactory factory = DocumentBuilderFactory.newInstance();
    factory.setNamespaceAware(true);/*from  w ww  .  j av a  2s  .c  o  m*/
    DocumentBuilder builder = factory.newDocumentBuilder();
    Document docParse = builder.parse(new ByteArrayInputStream(ArrayUtils.toPrimitive(document)));
    return docParse;
}

---

From source file:org.openhab.binding.BluetoothLE.protocol.BluetoothLESimulator.java

@Override
public Object getData() throws Exception {
    Thread.sleep(5000); // do not run havoc :-)

    simulateFreeTecDevices(freeTecDevice1);
    simulateFreeTecDevices(freeTecDevice2);

    currentDevice++;//from  ww w .ja va 2 s.com
    if (currentDevice >= devices.size())
        currentDevice = 0;
    byte[] bytes = ArrayUtils.toPrimitive(devices.get(currentDevice));

    return getData(bytes, bytes.length);
}

---

From source file:org.openhab.binding.elerotransmitterstick.internal.stick.SerialConnection.java

private void analyzeBuffer() {
    // drop everything before the beginning of the packet header 0xAA
    while (!bytes.isEmpty() && bytes.get(0) != (byte) 0xAA) {
        logger.trace("dropping byte {} from buffer", bytes.get(0));
        bytes.remove(0);/*from  w  ww .ja  v a  2s  .  co m*/
    }

    if (logger.isTraceEnabled()) {
        logger.trace("buffer contains {} bytes: {}", bytes.size(),
                ArrayUtils.toPrimitive(bytes.toArray(new Byte[bytes.size()])));
    }
    if (bytes.size() > 1) {
        // second byte should be length byte (has to be either 0x04 or 0x05)
        int len = bytes.get(1);
        logger.trace("packet length is {} bytes.", len);

        if (len != 4 && len != 5) {
            // invalid length, drop packet
            bytes.remove(0);
            analyzeBuffer();
        } else if (bytes.size() > len + 1) {
            // we have a complete packet in the buffer, analyze it
            // third byte should be response type byte (has to be either EASY_CONFIRM or EASY_ACK)
            byte respType = bytes.get(2);

            synchronized (bytes) {
                if (respType == ResponseStatus.EASY_CONFIRM) {
                    logger.trace("response type is EASY_CONFIRM.");

                    long val = bytes.get(0) + bytes.get(1) + bytes.get(2) + bytes.get(3) + bytes.get(4)
                            + bytes.get(5);
                    if (val % 256 == 0) {
                        response = ResponseUtil.createResponse(bytes.get(3), bytes.get(4));
                    } else {
                        logger.warn("invalid response checksum. Skipping response.");
                    }

                    bytes.notify();
                } else if (respType == ResponseStatus.EASY_ACK) {
                    logger.trace("response type is EASY_ACK.");

                    long val = bytes.get(0) + bytes.get(1) + bytes.get(2) + bytes.get(3) + bytes.get(4)
                            + bytes.get(5) + bytes.get(6);
                    if (val % 256 == 0) {
                        response = ResponseUtil.createResponse(bytes.get(3), bytes.get(4), bytes.get(5));
                    } else {
                        logger.warn("invalid response checksum. Skipping response.");
                    }

                    bytes.notify();
                } else {
                    logger.warn("invalid response type {}. Skipping response.", respType);
                }
            }

            bytes.remove(0);
            analyzeBuffer();
        }
    }
}

---

From source file:org.openhab.binding.wr3223.internal.AbstractWR3223Connector.java

/**
 * Read bytes from input stream until ETX.
 *
 * @return The extracted answer./*  www. j  a  va 2  s  . c o  m*/
 * @throws IOException
 */
private byte[] readAnswer() throws IOException {
    List<Byte> answerList = new ArrayList<Byte>();
    Byte val;
    do {
        val = inputStream.readByte();
        answerList.add(val);
    } while (val != ETX);
    byte[] answer = ArrayUtils.toPrimitive(answerList.toArray(new Byte[0]));
    return answer;
}

---

From source file:org.openlmis.web.view.pdf.requisition.RequisitionPdfModel.java

private PdfPTable prepareTable(List<? extends Column> visibleColumns) throws DocumentException {
    java.util.List<Integer> widths = new ArrayList<>();
    for (Column column : visibleColumns) {
        widths.add(column.getColumnWidth());
    }/*from  w  w  w  .j  a  va 2 s .c om*/
    PdfPTable table = new PdfPTable(widths.size());

    table.setWidths(ArrayUtils.toPrimitive(widths.toArray(new Integer[widths.size()])));
    table.getDefaultCell().setBackgroundColor(HEADER_BACKGROUND);
    table.getDefaultCell().setPadding(CELL_PADDING);
    table.setWidthPercentage(WIDTH_PERCENTAGE);
    table.setSpacingBefore(TABLE_SPACING);
    table.setHeaderRows(2);
    table.setFooterRows(1);
    setTableHeader(table, visibleColumns);
    setBlankFooter(table, visibleColumns.size());
    return table;
}

---

From source file:org.opentox.jaqpot3.qsar.util.WekaInstancesProcess.java

public static Instances getFilteredInstances(Instances inputData, List<Feature> independentFeatures,
        Feature dependentFeature) throws JaqpotException {
    try {/*from   w  w  w.  j  a v a2  s  . com*/
        List<Integer> indexArray = getDescriptorsIndexArray(inputData, independentFeatures, dependentFeature);
        //apply filter for deleting the attributes other than these descriptors 
        int[] intArray = ArrayUtils.toPrimitive(indexArray.toArray(new Integer[indexArray.size()]));
        int m = 1;
        Remove rm = new Remove();
        rm.setOptions(new String[] { "-V" });
        rm.setAttributeIndicesArray(intArray);
        rm.setInputFormat(inputData);
        Instances filteredData = Filter.useFilter(inputData, rm);

        return filteredData;

    } catch (Exception ex) {
        throw new JaqpotException(ex);
    }
}

---

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