List of usage examples for org.apache.hadoop.mapred JobConf setNumReduceTasks
public void setNumReduceTasks(int n)
From source file:edu.ucsb.cs.sort.signature.SigSortMain.java
License:Apache License
/** * Sets the job configurations including the mapper and reducer classes to * do the sorting based signatures./*w w w .j a va 2 s . c om*/ */ public static void main(String[] args) throws IOException { JobConf job = new JobConf(); new GenericOptionsParser(job, args); job.setJobName(SigSortMain.class.getSimpleName()); job.setJarByClass(SigSortMain.class); job.setMapperClass(SigSortMapper.class); job.setMapOutputKeyClass(BitSignature.class); job.setMapOutputValueClass(LongWritable.class); job.setPartitionerClass(SigRangePartitioner.class); job.setReducerClass(SigSortReducer.class); job.setNumReduceTasks(job.getInt(SortDriver.NUM_REDUCE_PROPERTY, SortDriver.NUM_REDUCE_VALUE)); job.setOutputKeyClass(LongWritable.class); job.setOutputValueClass(BitSignature.class); // // set input & output // String inputDir = SortDriver.INPUT_DIR; if (inputDir == null) { throw new UnsupportedOperationException("ERROR: input path not set"); } job.setInputFormat(SequenceFileInputFormat.class); SequenceFileInputFormat.addInputPath(job, new Path(inputDir)); Path outputPath = new Path(OUTPUT_PATH); FileSystem.get(job).delete(outputPath, true); job.setOutputFormat(SequenceFileOutputFormat.class); FileOutputFormat.setOutputPath(job, outputPath); // // run // JobSubmitter.run(job, "Sort By Signature Bytes", -1); }
From source file:edu.umd.cloud9.collection.aquaint2.DemoCountAquaint2Documents.java
License:Apache License
/** * Runs this tool./*w w w . ja v a 2s .c om*/ */ public int run(String[] args) throws Exception { if (args.length != 4) { printUsage(); return -1; } String inputPath = args[0]; String outputPath = args[1]; String mappingFile = args[2]; int mapTasks = Integer.parseInt(args[3]); System.out.println("input dir: " + inputPath); System.out.println("output dir: " + outputPath); System.out.println("mapping file: " + mappingFile); System.out.println("number of mappers: " + mapTasks); JobConf conf = new JobConf(DemoCountAquaint2Documents.class); conf.setJobName("DemoCountAquaint2Documents"); conf.setNumMapTasks(mapTasks); conf.setNumReduceTasks(0); FileInputFormat.setInputPaths(conf, new Path(inputPath)); FileOutputFormat.setOutputPath(conf, new Path(outputPath)); FileOutputFormat.setCompressOutput(conf, false); conf.setInputFormat(Aquaint2DocumentInputFormatOld.class); conf.setOutputKeyClass(Text.class); conf.setOutputValueClass(IntWritable.class); conf.setMapperClass(MyMapper.class); // delete the output directory if it exists already FileSystem.get(conf).delete(new Path(outputPath), true); JobClient.runJob(conf); // clean up FileSystem.get(conf).delete(new Path(outputPath), true); return 0; }
From source file:edu.umd.cloud9.collection.aquaint2.NumberAquaint2Documents.java
License:Apache License
/** * Runs this tool.//from w w w . j a v a 2 s . com */ public int run(String[] args) throws Exception { if (args.length != 3) { printUsage(); return -1; } String inputPath = args[0]; String outputPath = args[1]; String outputFile = args[2]; int mapTasks = 10; LOG.info("Tool: " + NumberAquaint2Documents.class.getCanonicalName()); LOG.info(" - Input path: " + inputPath); LOG.info(" - Output path: " + outputPath); LOG.info(" - Output file: " + outputFile); JobConf conf = new JobConf(NumberAquaint2Documents.class); conf.setJobName(NumberAquaint2Documents.class.getSimpleName()); conf.setNumMapTasks(mapTasks); conf.setNumReduceTasks(1); FileInputFormat.setInputPaths(conf, new Path(inputPath)); FileOutputFormat.setOutputPath(conf, new Path(outputPath)); FileOutputFormat.setCompressOutput(conf, false); conf.setInputFormat(Aquaint2DocumentInputFormat.class); conf.setOutputKeyClass(Text.class); conf.setOutputValueClass(IntWritable.class); conf.setOutputFormat(TextOutputFormat.class); conf.setMapperClass(MyMapper.class); conf.setReducerClass(MyReducer.class); // Delete the output directory if it exists already. FileSystem.get(conf).delete(new Path(outputPath), true); JobClient.runJob(conf); Aquaint2DocnoMapping.writeDocnoData(new Path(outputPath + "/part-00000"), new Path(outputFile), FileSystem.get(conf)); return 0; }
From source file:edu.umd.cloud9.collection.clue.ClueWarcForwardIndexBuilder.java
License:Apache License
/** * Runs this tool.// w w w.j a va2 s .co m */ @SuppressWarnings("static-access") public int run(String[] args) throws Exception { Options options = new Options(); options.addOption(OptionBuilder.withArgName("path").hasArg() .withDescription("(required) collection path (must be block-compressed SequenceFiles)") .create(COLLECTION_OPTION)); options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("(required) output index path") .create(INDEX_OPTION)); CommandLine cmdline; CommandLineParser parser = new GnuParser(); try { cmdline = parser.parse(options, args); } catch (ParseException exp) { System.err.println("Error parsing command line: " + exp.getMessage()); return -1; } if (!cmdline.hasOption(COLLECTION_OPTION) || !cmdline.hasOption(INDEX_OPTION)) { HelpFormatter formatter = new HelpFormatter(); formatter.printHelp(this.getClass().getName(), options); ToolRunner.printGenericCommandUsage(System.out); return -1; } JobConf conf = new JobConf(getConf(), ClueWarcForwardIndexBuilder.class); FileSystem fs = FileSystem.get(conf); String collectionPath = cmdline.getOptionValue(COLLECTION_OPTION); String indexFile = cmdline.getOptionValue(INDEX_OPTION); LOG.info("Tool name: " + ClueWarcForwardIndexBuilder.class.getSimpleName()); LOG.info(" - collection path: " + collectionPath); LOG.info(" - index file: " + indexFile); LOG.info("Note: This tool only works on block-compressed SequenceFiles!"); Random random = new Random(); Path outputPath = new Path( "tmp-" + ClueWarcForwardIndexBuilder.class.getSimpleName() + "-" + random.nextInt(10000)); conf.setJobName(ClueWarcForwardIndexBuilder.class.getSimpleName() + ":" + collectionPath); conf.setNumMapTasks(100); conf.setNumReduceTasks(1); // Note, we have to add the files one by one, otherwise, SequenceFileInputFormat // thinks its a MapFile. for (FileStatus status : fs.listStatus(new Path(collectionPath))) { FileInputFormat.addInputPath(conf, status.getPath()); } FileOutputFormat.setOutputPath(conf, outputPath); FileOutputFormat.setCompressOutput(conf, false); conf.setInputFormat(NoSplitSequenceFileInputFormat.class); conf.setOutputKeyClass(IntWritable.class); conf.setOutputValueClass(Text.class); conf.setMapRunnerClass(MyMapRunner.class); conf.setReducerClass(IdentityReducer.class); // delete the output directory if it exists already fs.delete(outputPath, true); RunningJob job = JobClient.runJob(conf); Counters counters = job.getCounters(); int blocks = (int) counters.findCounter(Blocks.Total).getCounter(); LOG.info("number of blocks: " + blocks); LOG.info("Writing index file..."); LineReader reader = new LineReader(fs.open(new Path(outputPath + "/part-00000"))); FSDataOutputStream out = fs.create(new Path(indexFile), true); out.writeUTF(ClueWarcForwardIndex.class.getCanonicalName()); out.writeUTF(collectionPath); out.writeInt(blocks); int cnt = 0; Text line = new Text(); while (reader.readLine(line) > 0) { String[] arr = line.toString().split("\\s+"); int docno = Integer.parseInt(arr[0]); int offset = Integer.parseInt(arr[1]); short fileno = Short.parseShort(arr[2]); out.writeInt(docno); out.writeInt(offset); out.writeShort(fileno); cnt++; if (cnt % 100000 == 0) { LOG.info(cnt + " blocks written"); } } reader.close(); out.close(); if (cnt != blocks) { throw new RuntimeException("Error: mismatch in block count!"); } fs.delete(outputPath, true); return 0; }
From source file:edu.umd.cloud9.collection.clue.CountClueWarcRecords.java
License:Apache License
/** * Runs this tool.//from www . j a va 2 s .c o m */ @SuppressWarnings("static-access") public int run(String[] args) throws Exception { Options options = new Options(); options.addOption(new Option(ORIGINAL_OPTION, "use original ClueWeb09 distribution")); options.addOption(new Option(REPACKED_OPTION, "use repacked SequenceFiles")); options.addOption(OptionBuilder.withArgName("path").hasArg() .withDescription("path: base path for 'original', actual path for 'repacked'").create(PATH_OPTION)); options.addOption(OptionBuilder.withArgName("path").hasArg().withDescription("DocnoMapping data path") .create(MAPPING_OPTION)); options.addOption(OptionBuilder.withArgName("num").hasArg() .withDescription("segment number (required if 'original')").create(SEGMENT_OPTION)); options.addOption(OptionBuilder.withArgName("path").hasArg() .withDescription("output file to write the number of records").create(COUNT_OPTION)); CommandLine cmdline; CommandLineParser parser = new GnuParser(); try { cmdline = parser.parse(options, args); } catch (ParseException exp) { HelpFormatter formatter = new HelpFormatter(); formatter.printHelp(this.getClass().getName(), options); ToolRunner.printGenericCommandUsage(System.out); System.err.println("Error parsing command line: " + exp.getMessage()); return -1; } boolean repacked; if (cmdline.hasOption(REPACKED_OPTION)) { repacked = true; } else if (cmdline.hasOption(ORIGINAL_OPTION)) { repacked = false; } else { HelpFormatter formatter = new HelpFormatter(); formatter.printHelp(this.getClass().getName(), options); ToolRunner.printGenericCommandUsage(System.out); System.err.println("Expecting either -original or -repacked"); return -1; } if (!cmdline.hasOption(PATH_OPTION) || !cmdline.hasOption(MAPPING_OPTION) || (!repacked && !cmdline.hasOption(SEGMENT_OPTION))) { HelpFormatter formatter = new HelpFormatter(); formatter.printHelp(this.getClass().getName(), options); ToolRunner.printGenericCommandUsage(System.out); return -1; } String path = cmdline.getOptionValue(PATH_OPTION); String mappingFile = cmdline.getOptionValue(MAPPING_OPTION); int segment = 1; if (!repacked) { segment = Integer.parseInt(cmdline.getOptionValue(SEGMENT_OPTION)); } LOG.info("Tool name: " + CountClueWarcRecords.class.getSimpleName()); LOG.info(" - repacked: " + repacked); LOG.info(" - path: " + path); LOG.info(" - mapping file: " + mappingFile); if (!repacked) { LOG.info(" - segment number: " + segment); } FileSystem fs = FileSystem.get(getConf()); int mapTasks = 10; JobConf conf = new JobConf(getConf(), CountClueWarcRecords.class); conf.setJobName( CountClueWarcRecords.class.getSimpleName() + (repacked ? ":" + path : ":segment" + segment)); conf.setNumMapTasks(mapTasks); conf.setNumReduceTasks(0); if (repacked) { // Note, we have to add the files one by one, otherwise, SequenceFileInputFormat // thinks its a MapFile. for (FileStatus status : fs.listStatus(new Path(path))) { FileInputFormat.addInputPath(conf, status.getPath()); } } else { ClueCollectionPathConstants.addEnglishCollectionPart(conf, path, segment); } DistributedCache.addCacheFile(new URI(mappingFile), conf); if (repacked) { conf.setInputFormat(SequenceFileInputFormat.class); } else { conf.setInputFormat(ClueWarcInputFormat.class); } conf.setOutputFormat(NullOutputFormat.class); conf.setMapperClass(MyMapper.class); RunningJob job = JobClient.runJob(conf); Counters counters = job.getCounters(); int numDocs = (int) counters.findCounter(Records.PAGES).getCounter(); LOG.info("Read " + numDocs + " docs."); if (cmdline.hasOption(COUNT_OPTION)) { String f = cmdline.getOptionValue(COUNT_OPTION); FSDataOutputStream out = fs.create(new Path(f)); out.write(new Integer(numDocs).toString().getBytes()); out.close(); } return 0; }
From source file:edu.umd.cloud9.collection.clue.RepackClueWarcRecords.java
License:Apache License
/** * Runs this tool./* ww w.ja v a 2s .co m*/ */ public int run(String[] args) throws Exception { if (args.length != 5) { printUsage(); return -1; } String basePath = args[0]; String outputPath = args[1]; int segment = Integer.parseInt(args[2]); String data = args[3]; String compressionType = args[4]; if (!compressionType.equals("block") && !compressionType.equals("record") && !compressionType.equals("none")) { System.err.println("Error: \"" + compressionType + "\" unknown compression type!"); System.exit(-1); } // Default block size. int blocksize = 1000000; JobConf conf = new JobConf(RepackClueWarcRecords.class); conf.setJobName("RepackClueWarcRecords:segment" + segment); conf.set("DocnoMappingDataFile", data); LOG.info("Tool name: RepackClueWarcRecords"); LOG.info(" - base path: " + basePath); LOG.info(" - output path: " + outputPath); LOG.info(" - segment number: " + segment); LOG.info(" - docno mapping data file: " + data); LOG.info(" - compression type: " + compressionType); if (compressionType.equals("block")) { LOG.info(" - block size: " + blocksize); } int mapTasks = 10; conf.setNumMapTasks(mapTasks); conf.setNumReduceTasks(0); ClueCollectionPathConstants.addEnglishCollectionPart(conf, basePath, segment); SequenceFileOutputFormat.setOutputPath(conf, new Path(outputPath)); if (compressionType.equals("none")) { SequenceFileOutputFormat.setCompressOutput(conf, false); } else { SequenceFileOutputFormat.setCompressOutput(conf, true); if (compressionType.equals("record")) { SequenceFileOutputFormat.setOutputCompressionType(conf, SequenceFile.CompressionType.RECORD); } else { SequenceFileOutputFormat.setOutputCompressionType(conf, SequenceFile.CompressionType.BLOCK); conf.setInt("io.seqfile.compress.blocksize", blocksize); } } conf.setInputFormat(ClueWarcInputFormat.class); conf.setOutputFormat(SequenceFileOutputFormat.class); conf.setOutputKeyClass(IntWritable.class); conf.setOutputValueClass(ClueWarcRecord.class); conf.setMapperClass(MyMapper.class); // Delete the output directory if it exists already. FileSystem.get(conf).delete(new Path(outputPath), true); JobClient.runJob(conf); return 0; }
From source file:edu.umd.cloud9.collection.line.DemoCountTextDocuments.java
License:Apache License
/** * Runs this tool./* w w w .jav a 2 s.c om*/ */ public int run(String[] args) throws Exception { if (args.length != 1) { printUsage(); return -1; } String inputPath = args[0]; sLogger.info("input: " + inputPath); JobConf conf = new JobConf(DemoCountTextDocuments.class); conf.setJobName("DemoCountTextDocuments"); conf.setNumReduceTasks(0); FileInputFormat.setInputPaths(conf, new Path(inputPath)); conf.setInputFormat(TextDocumentInputFormat.class); conf.setOutputFormat(NullOutputFormat.class); conf.setMapperClass(MyMapper.class); JobClient.runJob(conf); return 0; }
From source file:edu.umd.cloud9.collection.line.NumberTextDocuments.java
License:Apache License
/** * Runs this tool./*from w w w .j av a 2 s. co m*/ */ public int run(String[] args) throws Exception { if (args.length != 4) { printUsage(); return -1; } String inputPath = args[0]; String outputPath = args[1]; String outputFile = args[2]; int mapTasks = Integer.parseInt(args[3]); sLogger.info("Tool: NumberTextDocuments"); sLogger.info(" - Input path: " + inputPath); sLogger.info(" - Output path: " + outputPath); sLogger.info(" - Output file: " + outputFile); sLogger.info("Launching with " + mapTasks + " mappers..."); JobConf conf = new JobConf(getConf(), NumberTextDocuments.class); conf.setJobName("NumberTextDocuments"); conf.setNumMapTasks(mapTasks); conf.setNumReduceTasks(1); FileInputFormat.setInputPaths(conf, new Path(inputPath)); FileOutputFormat.setOutputPath(conf, new Path(outputPath)); FileOutputFormat.setCompressOutput(conf, false); conf.setInputFormat(TextDocumentInputFormat.class); conf.setOutputKeyClass(Text.class); conf.setOutputValueClass(IntWritable.class); conf.setOutputFormat(TextOutputFormat.class); conf.setMapperClass(MyMapper.class); conf.setReducerClass(MyReducer.class); // delete the output directory if it exists already FileSystem.get(conf).delete(new Path(outputPath), true); JobClient.runJob(conf); String input = outputPath + (outputPath.endsWith("/") ? "" : "/") + "/part-00000"; TextDocnoMapping.writeDocnoData(input, outputFile, FileSystem.get(getConf())); return 0; }
From source file:edu.umd.cloud9.collection.medline.DemoCountMedlineCitations.java
License:Apache License
/** * Runs this tool.//from ww w.j ava2 s.c o m */ public int run(String[] args) throws Exception { if (args.length != 3) { printUsage(); return -1; } String inputPath = args[0]; String outputPath = args[1]; String mappingFile = args[2]; sLogger.info("input: " + inputPath); sLogger.info("output dir: " + outputPath); sLogger.info("docno mapping file: " + mappingFile); JobConf conf = new JobConf(DemoCountMedlineCitations.class); conf.setJobName("DemoCountMedlineCitations"); conf.setNumReduceTasks(0); // pass in the class name as a String; this is makes the mapper general // in being able to load any collection of Indexable objects that has // docid/docno mapping specified by a DocnoMapping object conf.set("DocnoMappingClass", "edu.umd.cloud9.collection.medline.MedlineDocnoMapping"); // put the mapping file in the distributed cache so each map worker will // have it DistributedCache.addCacheFile(new URI(mappingFile), conf); FileInputFormat.setInputPaths(conf, new Path(inputPath)); FileOutputFormat.setOutputPath(conf, new Path(outputPath)); FileOutputFormat.setCompressOutput(conf, false); conf.setInputFormat(MedlineCitationInputFormat.class); conf.setOutputKeyClass(Text.class); conf.setOutputValueClass(IntWritable.class); conf.setMapperClass(MyMapper.class); // delete the output directory if it exists already FileSystem.get(conf).delete(new Path(outputPath), true); JobClient.runJob(conf); return 0; }
From source file:edu.umd.cloud9.collection.medline.NumberMedlineCitations.java
License:Apache License
/** * Runs this tool.//from ww w .j ava 2s.c om */ public int run(String[] args) throws Exception { if (args.length != 4) { printUsage(); return -1; } String inputPath = args[0]; String outputPath = args[1]; String outputFile = args[2]; int mapTasks = Integer.parseInt(args[3]); sLogger.info("Tool name: NumberMedlineCitations"); sLogger.info(" - Input path: " + inputPath); sLogger.info(" - Output path: " + outputPath); sLogger.info(" - Output file: " + outputFile); sLogger.info("Launching with " + mapTasks + " mappers..."); JobConf conf = new JobConf(getConf(), NumberMedlineCitations.class); conf.setJobName("NumberMedlineCitations"); conf.setNumMapTasks(mapTasks); conf.setNumReduceTasks(1); FileInputFormat.setInputPaths(conf, new Path(inputPath)); FileOutputFormat.setOutputPath(conf, new Path(outputPath)); FileOutputFormat.setCompressOutput(conf, false); conf.setInputFormat(MedlineCitationInputFormat.class); conf.setOutputKeyClass(IntWritable.class); conf.setOutputValueClass(IntWritable.class); conf.setOutputFormat(TextOutputFormat.class); conf.setMapperClass(MyMapper.class); conf.setReducerClass(MyReducer.class); // delete the output directory if it exists already FileSystem.get(conf).delete(new Path(outputPath), true); RunningJob job = JobClient.runJob(conf); // write out various properties Counters counters = job.getCounters(); Counter counter = counters.findCounter("edu.umd.cloud9.collection.medline.NumberMedlineCitations$Citations", 0, ""); int numdocs = (int) counter.getCounter(); sLogger.info("total number of docs: " + numdocs); MedlineDocnoMapping.writeDocidData(outputPath + "/part-00000", outputFile); return 0; }