Example usage for org.dom4j.io SAXReader SAXReader

Introduction

In this page you can find the example usage for org.dom4j.io SAXReader SAXReader.

Prototype

public SAXReader()

Source Link

Usage

From source file:com.fxdigital.manager.SoftInfoImpl.java

/**
 * ??/*from   ww  w. j av a  2 s  .c  o  m*/
 * 
 * @return
 */
public String getSoftVersion() {
    String version = null;
    String path = getPath();
    if (path == null) {
        return "?";
    }
    File f = new File(path);
    SAXReader reader = new SAXReader();
    try {
        Document doc = reader.read(f);
        Element root = doc.getRootElement();
        version = root.attributeValue("version");
        version = "V" + version;
    } catch (Exception e) {
        e.printStackTrace();
    }
    if (version == null)
        version = "V1.0";
    return version;
}

From source file:com.fxdigital.manager.SoftInfoImpl.java

/**
 * ??//w  w  w . ja v a 2s.  c o  m
 * 
 * @return
 */
public String getLicenseTime() {
    String time = null;
    String path = getPath();
    if (path == null) {
        return "?";
    }
    File f = new File(path);
    SAXReader reader = new SAXReader();
    try {
        Document doc = reader.read(f);
        Element root = doc.getRootElement();
        time = root.attributeValue("SerialNumber");
    } catch (Exception e) {
        e.printStackTrace();
    }
    if (time != null && time.length() >= 14) {
        time = time.substring(0, 4) + "-" + time.substring(4, 6) + "-" + time.substring(6, 8) + " "
                + time.substring(8, 10) + ":" + time.substring(10, 12) + ":" + time.substring(12, 14);
    }

    return time;
}

From source file:com.gi.desktop.maptool.dialog.MapServiceConfDialog.java

License:Open Source License

@SuppressWarnings("unchecked")
private void loadAgsSchema() {
    JFileChooser dialog = getJFileChooserAgsSchema();
    int val = dialog.showOpenDialog(this);
    if (val == JFileChooser.APPROVE_OPTION) {
        File agsSchema = dialog.getSelectedFile();
        try {// w  w  w  .ja  va  2 s.c  o  m
            FileInputStream in = new FileInputStream(agsSchema);
            SAXReader saxReader = new SAXReader();
            Document document = saxReader.read(in);
            Element root = document.getRootElement();
            Element eTileCacheInfo = root.element("TileCacheInfo");

            Element eTileOrigin = eTileCacheInfo.element("TileOrigin");
            this.jTextFieldOriginX.setText(eTileOrigin.elementText("X"));
            this.jTextFieldOriginY.setText(eTileOrigin.elementText("Y"));

            this.jTextFieldWidth.setText(eTileCacheInfo.elementText("TileCols"));
            this.jTextFieldHeight.setText(eTileCacheInfo.elementText("TileRows"));

            jListLevelsModel.removeAllElements();
            Element eLODInfos = eTileCacheInfo.element("LODInfos");
            for (Iterator iLODInfos = eLODInfos.elementIterator(); iLODInfos.hasNext();) {
                Element eLODInfo = (Element) iLODInfos.next();
                TileLodInfo tileLodInfo = new TileLodInfo();
                tileLodInfo.setLevel(Integer.valueOf(eLODInfo.elementText("LevelID")));
                tileLodInfo.setScale(Double.valueOf(eLODInfo.elementText("Scale")));
                tileLodInfo.setResolution(Double.valueOf(eLODInfo.elementText("Resolution")));

                LodItem item = new LodItem();
                item.setTileLodInfo(tileLodInfo);
                jListLevelsModel.addElement(item);
            }
        } catch (Exception e) {
            JOptionPane.showMessageDialog(null, "Load Error!");
        }
    }
}

From source file:com.github.autoprimer3.AutoPrimer3Config.java

License:Open Source License

public void readGenomeXmlFile(File xml) throws IOException, DocumentException {
    SAXReader reader = new SAXReader();
    Document doc = reader.read(xml);
    buildsAndTables.setDasGenomeXmlDocument(doc);
    buildsAndTables.readDasGenomeXmlDocument();
    setBuildToDescription(buildsAndTables.getBuildToDescription());
    setBuildToMapMaster(buildsAndTables.getBuildToMapMaster());

}

From source file:com.github.autoprimer3.AutoPrimer3Config.java

License:Open Source License

public Document getBuildXmlDocument(String build, Boolean forceRefresh)
        throws DocumentException, MalformedURLException, IOException {
    SAXReader reader = new SAXReader();
    File f = getBuildXmlFile(build);
    if (!f.exists() || forceRefresh) {
        Document dasXml = buildsAndTables.getTableXmlDocument(build);
        writeTableXmlFile(dasXml, build);
    }/*from www.  j  a  v a  2s.  c o m*/
    return reader.read(f);
}

From source file:com.github.autoprimer3.AutoPrimer3Config.java

License:Open Source License

public LinkedHashSet<String> readTableFile(File xml) throws DocumentException {
    SAXReader reader = new SAXReader();
    Document dasXml = reader.read(xml);
    return readTableFile(dasXml);
}

From source file:com.github.autoprimer3.AutoPrimer3Config.java

License:Open Source License

public LinkedHashSet<String> readTableFile(File xml, String category)
        throws DocumentException, MalformedURLException {
    SAXReader reader = new SAXReader();
    Document dasXml = reader.read(xml);
    return readTableFile(dasXml, category);
}

From source file:com.github.autoprimer3.GetUcscBuildsAndTables.java

License:Open Source License

public void connectToUcsc() throws DocumentException, MalformedURLException {
    SAXReader reader = new SAXReader();
    URL url = new URL("http://genome.ucsc.edu/cgi-bin/das/dsn");
    //URL url = new URL("http://genome-euro.ucsc.edu/cgi-bin/das/dsn");
    dasGenomeXml = reader.read(url);//from  ww w.j  ava  2 s.  c om
    readDasGenomeXmlDocument();
}

From source file:com.github.autoprimer3.GetUcscBuildsAndTables.java

License:Open Source License

public Document getTableXmlDocument(String build) throws DocumentException, MalformedURLException {
    SAXReader reader = new SAXReader();
    URL url = new URL("http://genome.ucsc.edu/cgi-bin/das/" + build + "/types");
    Document dasXml;/*from  ww  w .  ja v  a 2s . co m*/
    dasXml = reader.read(url);
    return dasXml;
}

From source file:com.github.autoprimer3.GetUcscBuildsAndTables.java

License:Open Source License

public String retrieveSequence(String build, String chrom, Integer start, Integer end)
        throws DocumentException, MalformedURLException {
    if (buildToDescription.isEmpty()) {
        this.connectToUcsc();
    }/*from   w w  w.  j  a  v  a  2 s  .c  o  m*/
    if (!buildToMapMaster.containsKey(build)) {
        return null;
    } else {
        StringBuilder dna = new StringBuilder();
        URL genomeUrl = new URL(
                buildToMapMaster.get(build) + "/dna?segment=" + chrom + ":" + (start + 1) + "," + end);
        SAXReader reader = new SAXReader();
        Document dasXml;
        dasXml = reader.read(genomeUrl);
        Element root = dasXml.getRootElement();
        for (Iterator i = root.elementIterator("SEQUENCE"); i.hasNext();) {
            Element dsn = (Element) i.next();
            Element seq = dsn.element("DNA");
            String text = seq.getText().replaceAll("\n", "");
            dna.append(text);
            //dna.append(seq.getText());
        }
        return dna.toString();

    }

}