Example usage for org.dom4j.io SAXReader SAXReader

List of usage examples for org.dom4j.io SAXReader SAXReader

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Introduction

In this page you can find the example usage for org.dom4j.io SAXReader SAXReader.

Prototype

public SAXReader()

Source Link

Usage

From source file:au.gov.ansto.bragg.process.parse.Parse.java

License:Open Source License

public static Document readFile(URL fileURL) throws DocumentException {
    SAXReader fileHandle = new SAXReader();
    Document documentHandle = fileHandle.read(fileURL);

    return documentHandle;
}

From source file:au.gov.ansto.bragg.process.parse.Parse.java

License:Open Source License

public static Document readFile(String fileName) throws DocumentException {
    SAXReader fileHandle = new SAXReader();
    Document documentHandle = fileHandle.read(fileName);
    return documentHandle;
}

From source file:au.gov.ansto.bragg.process.parse.Parse.java

License:Open Source License

public static Document readFile(File fileName) throws DocumentException {
    SAXReader fileHandle = new SAXReader();
    Document documentHandle = null;
    try {//  ww w.ja v  a2 s.c  o  m
        documentHandle = fileHandle.read(fileName);
    } catch (DocumentException e) {
        // TODO: handle exception
        try {
            documentHandle = fileHandle.read(fileName.toURL());
        } catch (MalformedURLException e1) {
            // TODO Auto-generated catch block
            throw new DocumentException(e1);
        }
    }
    return documentHandle;
}

From source file:batch.performance.visualizer.Visualizer.java

License:Open Source License

public static void main(String[] args) throws Exception {
    if (args.length != 2) {
        System.out.println("Usage: Visualizer <result.xml> <outDir>");
        System.exit(-1);/*from   w  w w  . j  a  va  2  s . c o  m*/
    }

    File input = new File(args[0]);
    File outDir = new File(args[1]);

    // TODO: validation of the ipnut

    // parse the test result
    Document dom = new SAXReader().read(new InputSource(input.toURL().toExternalForm()));
    Result r = new Result(dom);

    // generate per-scenario results
    for (Iterator itr = r.scenarios(); itr.hasNext();) {
        ScenarioResult scenario = (ScenarioResult) itr.next();

        DataSetBuilder dsb = new DataSetBuilder();

        for (Iterator jtr = scenario.dataSeries(); jtr.hasNext();) {
            DataSeries ds = (DataSeries) jtr.next();
            ds.addTo(dsb);
        }

        CategoryDataset ds = dsb.build();

        // full version
        printChart(createChart(ds, "Summary of " + scenario, true),
                new File(outDir, scenario.name + ".large.png"), WIDTH * 4, HEIGHT * 4);
        // small version
        printChart(createChart(ds, null, false), new File(outDir, scenario.name + ".small.png"), WIDTH, HEIGHT);
    }

    {// generate the total summary chart
        DataSetBuilder dsb = new DataSetBuilder();
        for (Iterator itr = r.scenarios(); itr.hasNext();) {
            ScenarioResult scenario = (ScenarioResult) itr.next();
            scenario.addTo(dsb);
        }
        CategoryDataset dataset = dsb.build();
        printChart(createChart(dataset, "Summary", true), new File(outDir, "summary.large.png"), WIDTH * 4,
                HEIGHT * 4);
        printChart(createChart(dataset, null, false), new File(outDir, "summary.small.png"), WIDTH, HEIGHT);
    }
}

From source file:be.hikage.maven.plugin.xmlmerge.MergeXmlMojo.java

License:Apache License

private Document loadXml(File baseFile) throws DocumentException {
    SAXReader reader = new SAXReader();
    return reader.read(baseFile);
}

From source file:be.mxs.common.util.pdf.general.dossierCreators.StaffDossierPDFCreator.java

private Vector parsePredefinedWeekSchedulesFromXMLConfigValue() {
    Vector schedules = new Vector();

    // read xml containing predefined weekSchedules
    try {/*from w ww  .j  a  va 2  s  .c  om*/
        SAXReader xmlReader = new SAXReader();
        String sXMLValue = MedwanQuery.getInstance().getConfigString("defaultWeekschedules");
        org.dom4j.Document document = xmlReader.read(new StringReader(sXMLValue));

        if (document != null) {
            org.dom4j.Element root = document.getRootElement();
            Iterator scheduleElems = root.elementIterator("WeekSchedule");

            PredefinedWeekSchedule schedule;
            org.dom4j.Element scheduleElem, timeBlockElem;
            while (scheduleElems.hasNext()) {
                schedule = new PredefinedWeekSchedule();

                scheduleElem = (org.dom4j.Element) scheduleElems.next();
                schedule.id = scheduleElem.attributeValue("id");
                schedule.type = scheduleElem.attributeValue("scheduleType");
                schedule.xml = scheduleElem.asXML();

                // timeblocks
                Iterator timeBlockElems = scheduleElem.element("TimeBlocks").elementIterator("TimeBlock");
                while (timeBlockElems.hasNext()) {
                    timeBlockElem = (org.dom4j.Element) timeBlockElems.next();

                    TimeBlock timeBlock = new TimeBlock();
                    timeBlock.id = checkString(timeBlockElem.attributeValue("id"));
                    timeBlock.dayIdx = checkString(timeBlockElem.elementText("DayIdx"));
                    timeBlock.beginHour = checkString(timeBlockElem.elementText("BeginHour"));
                    timeBlock.endHour = checkString(timeBlockElem.elementText("EndHour"));

                    schedule.timeBlocks.add(timeBlock);
                }

                Collections.sort(schedule.timeBlocks); // on day     
                schedules.add(schedule);
            }
        }
    } catch (Exception e) {
        if (Debug.enabled)
            e.printStackTrace();
        Debug.printProjectErr(e, Thread.currentThread().getStackTrace());
    }

    return schedules;
}

From source file:BlastResultXMLsplit.BlastXMLsplit.java

public BlastXMLsplit(String filepath, int seqnumber)
        throws FileNotFoundException, IOException, ParserConfigurationException {
    SAXReader reader = new SAXReader();
    reader.setValidation(false);//  w  w  w .  j  a v a2s.c o  m
    try {
        System.out.println("Xlmfile reading");
        Document document = reader.read(new FileInputStream(filepath));//XMLdocument?
        System.out.println("Xlmfile read done!");
        org.dom4j.DocumentFactory DocumentFactory = new org.dom4j.DocumentFactory();

        ArrayList str = new ArrayList();//??? 

        String fileoutpath;

        org.dom4j.Element rootElm = document.getRootElement();//
        File f = new File(filepath);
        int count = 1;
        List<org.dom4j.Element> blastOutput_iterations = rootElm.element("BlastOutput_iterations").elements();//?
        org.dom4j.Element BlastOutput_program = rootElm.element("BlastOutput_program");
        org.dom4j.Element BlastOutput_version = rootElm.element("BlastOutput_version");
        org.dom4j.Element BlastOutput_reference = rootElm.element("BlastOutput_reference");
        org.dom4j.Element BlastOutput_db = rootElm.element("BlastOutput_db");
        //?
        BlastOutput_program.getParent().remove(BlastOutput_program);
        BlastOutput_version.getParent().remove(BlastOutput_version);
        BlastOutput_reference.getParent().remove(BlastOutput_reference);
        BlastOutput_db.getParent().remove(BlastOutput_db);
        // org.dom4j.Element BlastOutput_query_def=rootElm.element("BlastOutput_query-def");
        //org.dom4j.Element BBlastOutput_query_len=rootElm.element("BlastOutput_query-len");

        org.dom4j.Element BlastOutput_param = rootElm.element("BlastOutput_param");
        rootElm.remove(BlastOutput_param);

        String Iteration_queryIDstr, Iteration_queryDefstr, Iteration_query_len;
        List<org.dom4j.Element> Iterationlist = null;
        int size = blastOutput_iterations.size();
        System.out.println("Your query seqcount is " + size + "\r\n Start dividing your file");
        for (int i = 0; i < size; i = i + seqnumber) {
            //??
            fileoutpath = f.getParent() + System.getProperty("file.separator") + count + ".xml";
            count++;
            System.out.println("The " + count + " is located in " + fileoutpath);
            FileOutputStream fos = new FileOutputStream(fileoutpath);
            OutputFormat format = OutputFormat.createPrettyPrint();
            XMLWriter writer = new XMLWriter(fos, format);
            // XMLWriter writer = new XMLWriter(new FileOutputStream(fileoutpath));
            //w??
            org.dom4j.Element firstelement = blastOutput_iterations.get(i);
            Iteration_queryIDstr = firstelement.element("Iteration_query-ID").getText();
            Iteration_queryDefstr = firstelement.element("Iteration_query-def").getText();
            Iteration_query_len = firstelement.element("Iteration_query-len").getText();

            //org.dom4j.DocumentFactory DocumentFactory = new org.dom4j.DocumentFactory();

            Document document2 = DocumentHelper.createDocument();
            ;
            org.dom4j.Element BlastOutputElement = document2.addElement("BlastOutput");
            //doc.setRootElement(BlastOutputElement);
            //;
            BlastOutputElement.add(BlastOutput_program);
            BlastOutputElement.add(BlastOutput_version);
            BlastOutputElement.add(BlastOutput_reference);
            BlastOutputElement.add(BlastOutput_db);
            BlastOutputElement.addElement("BlastOutput_query-ID");
            BlastOutputElement.element("BlastOutput_query-ID").setText(Iteration_queryIDstr);
            BlastOutputElement.addElement("BlastOutput_query-def");
            BlastOutputElement.element("BlastOutput_query-def").setText(Iteration_queryDefstr);
            BlastOutputElement.addElement("BlastOutput_query-len");
            BlastOutputElement.element("BlastOutput_query-len").setText(Iteration_query_len);
            //                Element BlastOutput_param_new=DocumentFactory.createElement("BlastOutput_param");
            //                for (Iterator it = BlastOutput_param.elementIterator(); it.hasNext();) {
            //                    Element tempele=(Element) it.next();
            //                    tempele.getParent().remove(tempele);
            //                    BlastOutput_param_new.add(tempele);
            //                }
            BlastOutputElement.add(BlastOutput_param);
            //BlastOutputElement.add(BlastOutput_param);
            if (i + seqnumber < blastOutput_iterations.size()) {
                Iterationlist = blastOutput_iterations.subList(i, i + seqnumber);
            } else {
                Iterationlist = blastOutput_iterations.subList(i, blastOutput_iterations.size() - 1);
            }
            //System.out.println(Iterationlist.size());
            //?query
            resetIterationlist(Iterationlist);
            //?BlastOutput_iterations

            Element BlastOutput_iterations = DocumentFactory.createElement("BlastOutput_iterations");
            //BlastOutputElement.addAttribute("BlastOutput_iterations");
            //org.dom4j.Element BlastOutput_iterations = new org.dom4j.Element("BlastOutput_iterations");
            for (int j = 0; j < Iterationlist.size(); j++) {
                Iterationlist.get(j).getParent().remove(Iterationlist.get(j));
                //System.out.println(j);
                BlastOutput_iterations.add(Iterationlist.get(j));
            }
            BlastOutputElement.add(BlastOutput_iterations);

            //
            writer.write(document2);
            writer.close();
            BlastOutput_program.getParent().remove(BlastOutput_program);
            BlastOutput_version.getParent().remove(BlastOutput_version);
            BlastOutput_reference.getParent().remove(BlastOutput_reference);
            BlastOutput_db.getParent().remove(BlastOutput_db);
            BlastOutput_param.getParent().remove(BlastOutput_param);
        }
    } catch (DocumentException ex) {
        Logger.getLogger(BlastXMLsplit.class.getName()).log(Level.SEVERE, null, ex);
    }

}

From source file:boxConnection.SerStreamingServer.java

License:Open Source License

public void record(Socket socket) throws IOException, DocumentException {

    //       BufferedReader input = new BufferedReader(new InputStreamReader(socket.getInputStream()));
    //       String line;
    //       while ((line=input.readLine())!=null) {
    //           System.out.println(line);
    //       }/* w  ww .j a  v  a2 s. c  o m*/

    //Pretty print the document to System.out
    //      OutputFormat format = OutputFormat.createPrettyPrint();
    //      XMLWriter writer = new XMLWriter( System.out, format );
    //      writer.write( document );

    byte[] message = new byte[10000];
    int messageLength = 0;

    messageLength = socket.getInputStream().read(message);
    // Umlaute filtern
    for (int i = 0; i < messageLength; i++) {
        if (message[i] > 0x7e
                || (message[i] < 0x20 && message[i] != '\t' && message[i] != '\n' && message[i] != '\r')) {
            message[i] = (byte) ' ';
        }
    }

    SAXReader reader = new SAXReader();
    ByteArrayInputStream in = new ByteArrayInputStream(message, 0, messageLength);
    Document document = reader.read(in);

    BORecordArgs recordArgs = SerXMLConverter.parseRecordDocument(document);
    if (recordArgs.getCommand().equals("stop")) {
        ControlMain.getControl().getView().getTabProgramm().getControl().stopRecord();
        Logger.getLogger("SerStreamingServer").info("From DBox: Stop record");
    }
    if (recordArgs.getCommand().equals("record")) {
        recordArgs.checkTitle();
        ControlMain.getControl().getView().getTabProgramm().getControl().startRecord(recordArgs);
        Logger.getLogger("SerStreamingServer").info("From DBox: Start record");
    }
    server.close(); //server restart
    this.run();
}

From source file:br.com.atus.util.CEPWebService.java

public Document getDocumento(URL url) throws DocumentException {
    SAXReader reader = new SAXReader();
    Document document = reader.read(url);

    return document;
}

From source file:br.com.cgcop.utilitarios.CEPWebService.java

private Document getDocumento(URL url) throws DocumentException {
    SAXReader reader = new SAXReader();
    Document document = reader.read(url);

    return document;
}