Example usage for org.jfree.chart.renderer.xy XYLineAndShapeRenderer setToolTipGenerator

List of usage examples for org.jfree.chart.renderer.xy XYLineAndShapeRenderer setToolTipGenerator

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Introduction

In this page you can find the example usage for org.jfree.chart.renderer.xy XYLineAndShapeRenderer setToolTipGenerator.

Prototype

@Override
public void setToolTipGenerator(XYToolTipGenerator generator)

Source Link

Document

Sets the tool tip generator for ALL series and sends a RendererChangeEvent to all registered listeners.

Usage

From source file:edu.unc.LCCC.caBIG.DWD.javaCode.visualization.SetUpPlotWindow.java

public static JPanel createXYLineAndShapeRendererChart(XYDataset data, String x, String y, int w, int h) {
    //XYDataset data = new SampleXYDataset2();
    JFreeChart chart = ChartFactory.createScatterPlot(null, // the title of the chart
            x, // the label for the X axis
            y, // the label for the Y axis
            data, // the dataset for the chart
            PlotOrientation.VERTICAL, // the orientation of the chart
            true, // a flag specifying whether or not a legend is required
            true, // a flag specifying whether or not tooltips should be generated
            false); // a flag specifying whether or not the chart should generate URLs

    XYPlot plot = (XYPlot) chart.getPlot();
    XYLineAndShapeRenderer renderer = new XYLineAndShapeRenderer();
    renderer.setSeriesLinesVisible(0, false);
    renderer.setSeriesShapesVisible(0, true);

    renderer.setSeriesLinesVisible(1, false);
    renderer.setSeriesShapesVisible(1, true);

    renderer.setSeriesLinesVisible(2, true);
    renderer.setSeriesShapesVisible(2, false);

    renderer.setToolTipGenerator(new StandardXYToolTipGenerator());
    renderer.setDefaultEntityRadius(6);/*  w w w  .  ja  va 2 s .c  o m*/
    plot.setRenderer(renderer);

    ChartPanel chartPanel = new ChartPanel(chart);
    chartPanel.setPreferredSize(new java.awt.Dimension(w, h));

    return chartPanel;
}

From source file:gov.nih.nci.caintegrator.ui.graphing.chart.plot.ClinicalPlot.java

private void createChart() {

    //String xLabel = factor1.toString();
    String xLabel = factor1AxisLabel;
    //String yLabel = factor2.toString();
    String yLabel = factor2AxisLabel;

    clinicalChart = ChartFactory.createScatterPlot("Clinical Plot", xLabel, yLabel, null,
            PlotOrientation.VERTICAL, true, true, false);

    XYPlot plot = (XYPlot) clinicalChart.getPlot();

    buildLegend();/* w  w w.j  a  va2s  .  co  m*/

    plot.setNoDataMessage(null);
    XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) plot.getRenderer();
    renderer.setToolTipGenerator(new StandardXYToolTipGenerator());
    renderer.setUseOutlinePaint(true);
    plot.setRangeCrosshairVisible(false);
    plot.setDomainCrosshairVisible(false);

    NumberAxis domainAxis = (NumberAxis) plot.getDomainAxis();
    NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis();

    //should determine axis range using datapoints.

    domainAxis.setAutoRangeIncludesZero(false);

    //get domain and range of the axis.
    DataRange domainAxisLimits = getDataRange(dataPoints, factor1, true);
    DataRange rangeAxisLimits = getDataRange(dataPoints, factor2, true);

    //domainAxis.setRange(domainAxisLimits.getMinRange(), domainAxisLimits.getMaxRange());
    //rangeAxis.setRange(rangeAxisLimits.getMinRange(), rangeAxisLimits.getMaxRange());

    double domainMax = Math.max(100.0, domainAxisLimits.getMaxRange()) + 5.0;
    double rangeMax = Math.max(100.0, rangeAxisLimits.getMaxRange()) + 5.0;

    domainAxis.setRange(0.0, domainMax);
    rangeAxis.setRange(0.0, rangeMax);

    System.out.println("domainAxis=" + domainAxis.getLabel());
    System.out.println("rangeAxis=" + rangeAxis.getLabel());

    createGlyphsAndAddToPlot(plot);
}

From source file:gov.nih.nci.cma.web.graphing.CMAPrincipalComponentAnalysisPlot.java

private void createChart() {

    String xLabel = component1.toString();
    String yLabel = component2.toString();

    pcaChart = ChartFactory.createScatterPlot("Principal Component Analysis", xLabel, yLabel, null,
            PlotOrientation.VERTICAL, true, true, false);

    XYPlot plot = (XYPlot) pcaChart.getPlot();

    buildLegend();// w ww.  ja  v a  2s .c  o m

    plot.setNoDataMessage(null);
    XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) plot.getRenderer();
    renderer.setToolTipGenerator(new StandardXYToolTipGenerator());
    renderer.setUseOutlinePaint(true);
    plot.setRangeCrosshairVisible(false);
    plot.setDomainCrosshairVisible(false);

    //        XYShapeAnnotation annotation = new XYShapeAnnotation(new Rectangle2D.Double(25.0, 25.0, 5, 5));
    //
    //        plot.addAnnotation(annotation);

    NumberAxis domainAxis = (NumberAxis) plot.getDomainAxis();
    NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis();

    //should determine axis range using datapoints.
    DataRange component1Range = getDataRange(dataPoints, PCAcomponent.PC1);
    DataRange component2Range = getDataRange(dataPoints, PCAcomponent.PC2);
    DataRange component3Range = getDataRange(dataPoints, PCAcomponent.PC3);

    Double pc1AbsMax = Math.max(Math.abs(component1Range.getMaxRange()),
            Math.abs(component1Range.getMinRange()));
    Double pc2AbsMax = Math.max(Math.abs(component2Range.getMaxRange()),
            Math.abs(component2Range.getMinRange()));
    Double pc3AbsMax = Math.max(Math.abs(component3Range.getMaxRange()),
            Math.abs(component3Range.getMinRange()));

    Double maxAbsVal = Math.max(pc1AbsMax, pc2AbsMax);

    maxAbsVal = Math.max(maxAbsVal, pc3AbsMax);

    //maxAbsVal = Math.max(100.0, maxAbsVal);

    domainAxis.setAutoRangeIncludesZero(false);

    double tickUnit = 25.0;

    if (maxAbsVal <= 50.0 && maxAbsVal >= 25.0) {
        tickUnit = 10.0; //5.0;
    } else if (maxAbsVal <= 25.0) {
        tickUnit = 5.0;
    }

    domainAxis.setTickUnit(new NumberTickUnit(tickUnit));
    rangeAxis.setTickUnit(new NumberTickUnit(tickUnit));

    double glyphScaleFactor = (maxAbsVal * 2.0) / 600.0; //assuming 600 pixels for the graph

    double adjAbsVal = Math.ceil(maxAbsVal + (glyphScaleFactor * 8.0));

    //domainAxis.setRange(-maxAbsVal, maxAbsVal);
    domainAxis.setRange(-adjAbsVal, adjAbsVal);

    //rangeAxis.setRange(-maxAbsVal, maxAbsVal);
    rangeAxis.setRange(-adjAbsVal, adjAbsVal);

    createGlyphsAndAddToPlot(plot); //, glyphScaleFactor);

    // Paint p = new GradientPaint(0, 0, Color.white, 1000, 0, Color.green);
    //try and match the UI e9e9e9
    Paint p = new Color(233, 233, 233);

    pcaChart.setBackgroundPaint(p);
}

From source file:gov.nih.nci.caintegrator.ui.graphing.chart.plot.PrincipalComponentAnalysisPlot.java

protected void createChart() {

    String xLabel = component1.toString();
    String yLabel = component2.toString();

    pcaChart = ChartFactory.createScatterPlot("Principal Component Analysis", xLabel, yLabel, null,
            PlotOrientation.VERTICAL, true, true, false);

    XYPlot plot = (XYPlot) pcaChart.getPlot();

    if (!this.colorBy.equals(PCAcolorByType.NONE)) {
        buildLegend();/*from  www . j  a va  2  s . c  om*/
    }

    plot.setNoDataMessage(null);
    XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) plot.getRenderer();
    renderer.setToolTipGenerator(new StandardXYToolTipGenerator());
    renderer.setUseOutlinePaint(true);
    plot.setRangeCrosshairVisible(false);
    plot.setDomainCrosshairVisible(false);

    //        XYShapeAnnotation annotation = new XYShapeAnnotation(new Rectangle2D.Double(25.0, 25.0, 5, 5));
    //           
    //        plot.addAnnotation(annotation);

    NumberAxis domainAxis = (NumberAxis) plot.getDomainAxis();
    NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis();

    //should determine axis range using datapoints.
    DataRange component1Range = getDataRange(dataPoints, PCAcomponent.PC1);
    DataRange component2Range = getDataRange(dataPoints, PCAcomponent.PC2);
    DataRange component3Range = getDataRange(dataPoints, PCAcomponent.PC3);

    Double pc1AbsMax = Math.max(Math.abs(component1Range.getMaxRange()),
            Math.abs(component1Range.getMinRange()));
    Double pc2AbsMax = Math.max(Math.abs(component2Range.getMaxRange()),
            Math.abs(component2Range.getMinRange()));
    Double pc3AbsMax = Math.max(Math.abs(component3Range.getMaxRange()),
            Math.abs(component3Range.getMinRange()));

    Double maxAbsVal = Math.max(pc1AbsMax, pc2AbsMax);

    maxAbsVal = Math.max(maxAbsVal, pc3AbsMax);

    maxAbsVal = Math.max(150.0, maxAbsVal);

    domainAxis.setAutoRangeIncludesZero(false);

    domainAxis.setRange(-maxAbsVal, maxAbsVal);
    rangeAxis.setRange(-maxAbsVal, maxAbsVal);

    domainAxis.setTickUnit(new NumberTickUnit(25.0));
    rangeAxis.setTickUnit(new NumberTickUnit(25.0));

    createGlyphsAndAddToPlot(plot);

    // Paint p = new GradientPaint(0, 0, Color.white, 1000, 0, Color.green);
    //try and match the UI e9e9e9
    Paint p = new Color(233, 233, 233);

    pcaChart.setBackgroundPaint(p);
}

From source file:gov.nih.nci.ispy.ui.graphing.chart.plot.ISPYPrincipalComponentAnalysisPlot.java

private void createChart() {

    String xLabel = component1.toString();
    String yLabel = component2.toString();

    pcaChart = ChartFactory.createScatterPlot("Principal Component Analysis", xLabel, yLabel, null,
            PlotOrientation.VERTICAL, true, true, false);

    XYPlot plot = (XYPlot) pcaChart.getPlot();

    buildLegend();/*  ww w  .  jav  a 2s  . c  om*/

    plot.setNoDataMessage(null);
    XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) plot.getRenderer();
    renderer.setToolTipGenerator(new StandardXYToolTipGenerator());
    renderer.setUseOutlinePaint(true);
    plot.setRangeCrosshairVisible(false);
    plot.setDomainCrosshairVisible(false);

    //        XYShapeAnnotation annotation = new XYShapeAnnotation(new Rectangle2D.Double(25.0, 25.0, 5, 5));
    //           
    //        plot.addAnnotation(annotation);

    NumberAxis domainAxis = (NumberAxis) plot.getDomainAxis();
    NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis();

    //should determine axis range using datapoints.
    DataRange component1Range = getDataRange(dataPoints, PCAcomponent.PC1);
    DataRange component2Range = getDataRange(dataPoints, PCAcomponent.PC2);
    DataRange component3Range = getDataRange(dataPoints, PCAcomponent.PC3);

    Double pc1AbsMax = Math.max(Math.abs(component1Range.getMaxRange()),
            Math.abs(component1Range.getMinRange()));
    Double pc2AbsMax = Math.max(Math.abs(component2Range.getMaxRange()),
            Math.abs(component2Range.getMinRange()));
    Double pc3AbsMax = Math.max(Math.abs(component3Range.getMaxRange()),
            Math.abs(component3Range.getMinRange()));

    Double maxAbsVal = Math.max(pc1AbsMax, pc2AbsMax);

    maxAbsVal = Math.max(maxAbsVal, pc3AbsMax);

    //maxAbsVal = Math.max(100.0, maxAbsVal);

    domainAxis.setAutoRangeIncludesZero(false);

    double tickUnit = 25.0;

    if (maxAbsVal <= 25.0) {
        tickUnit = 5.0;
    } else if (maxAbsVal <= 50.0) {
        tickUnit = 10.0;
    }

    domainAxis.setTickUnit(new NumberTickUnit(tickUnit));
    rangeAxis.setTickUnit(new NumberTickUnit(tickUnit));

    double glyphScaleFactor = (maxAbsVal * 2.0) / 600.0; //assuming 600 pixels for the graph

    double adjAbsVal = Math.ceil(maxAbsVal + (glyphScaleFactor * 8.0));

    //domainAxis.setRange(-maxAbsVal, maxAbsVal);
    domainAxis.setRange(-adjAbsVal, adjAbsVal);

    //rangeAxis.setRange(-maxAbsVal, maxAbsVal);
    rangeAxis.setRange(-adjAbsVal, adjAbsVal);

    createGlyphsAndAddToPlot(plot, glyphScaleFactor);

    // Paint p = new GradientPaint(0, 0, Color.white, 1000, 0, Color.green);
    //try and match the UI e9e9e9
    Paint p = new Color(233, 233, 233);

    pcaChart.setBackgroundPaint(p);
}

From source file:grafix.graficos.indices.Indice.java

public void plotar(final XYPlot plot, final JanelaGraficos janela, final int contador) {
    XYLineAndShapeRenderer indicesRenderer = new XYLineAndShapeRenderer();
    indicesRenderer.setSeriesLinesVisible(0, isTracoContinuo());
    indicesRenderer.setSeriesShapesVisible(0, !isTracoContinuo());
    indicesRenderer.setSeriesShape(0, ShapeUtilities.createDiamond(1.5f));
    indicesRenderer.setStroke(new BasicStroke(getEspessura() * 0.5f));
    indicesRenderer.setToolTipGenerator(new IndiceToolTipGenerator(this));
    indicesRenderer.setPaint(getCor());/* w w  w  . ja va2s .  c om*/
    plot.setRenderer(contador, indicesRenderer);
    plot.setDataset(contador, getDataSet(janela));
}

From source file:gov.nih.nci.ispy.ui.graphing.chart.plot.ISPYCorrelationScatterPlot.java

private void createChart() {

    String title = "Correlation Scatter Plot  correlationCoefficient=" + nf.format(corrValue) + " N="
            + dataPoints.size();//from   ww w  .  j av  a2  s. co m

    corrChart = ChartFactory.createScatterPlot(title, xLabel, yLabel, null, PlotOrientation.VERTICAL, true,
            true, false);

    XYPlot plot = (XYPlot) corrChart.getPlot();

    plot.setNoDataMessage(null);
    XYLineAndShapeRenderer renderer = (XYLineAndShapeRenderer) plot.getRenderer();
    renderer.setToolTipGenerator(new StandardXYToolTipGenerator());
    renderer.setUseOutlinePaint(true);
    plot.setRangeCrosshairVisible(false);
    plot.setDomainCrosshairVisible(false);

    //        XYShapeAnnotation annotation = new XYShapeAnnotation(new Rectangle2D.Double(25.0, 25.0, 5, 5));
    //           
    //        plot.addAnnotation(annotation);

    NumberAxis domainAxis = (NumberAxis) plot.getDomainAxis();
    NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis();

    //should determine axis range using datapoints.
    List<PlotPoint> plotPoints = new ArrayList<PlotPoint>(dataPoints);
    DataRange Xrange = PlotPoint.getDataRange(plotPoints, AxisType.X_AXIS);
    DataRange Yrange = PlotPoint.getDataRange(plotPoints, AxisType.Y_AXIS);

    //        Double xAbsMax = Math.max(Math.abs(Xrange.getMaxRange()), Math.abs(Xrange.getMinRange()));
    //        Double yAbsMax = Math.max(Math.abs(Yrange.getMaxRange()), Math.abs(Yrange.getMinRange()));
    //        
    //        Double maxAbsVal = Math.max(xAbsMax, yAbsMax);

    domainAxis.setAutoRangeIncludesZero(false);

    double xTick = 10.0;
    double yTick = 10.0;

    double xdist = Math.abs(Xrange.getMaxRange() - Xrange.getMinRange());
    double ydist = Math.abs(Yrange.getMaxRange() - Yrange.getMinRange());
    if (xdist < 10.0) {
        xTick = 1.0;
    }

    if (ydist < 10.0) {
        yTick = 1.0;
    }

    //        if (maxAbsVal <= 25.0) {
    //          tickUnit =5.0;
    //        }
    //        else if (maxAbsVal <= 50.0) {
    //          tickUnit = 10.0;
    //        }

    domainAxis.setTickUnit(new NumberTickUnit(xTick));
    rangeAxis.setTickUnit(new NumberTickUnit(yTick));

    //double glyphScaleFactor = (maxAbsVal*2.0)/600.0;   //assuming 600 pixels for the graph
    double xScale = xdist / 600.0;
    //double glyphScaleFactor = 1.0;
    double yScale = ydist / 600.0;

    //double adjAbsVal = Math.ceil(maxAbsVal + (glyphScaleFactor*8.0));

    //domainAxis.setRange(-maxAbsVal, maxAbsVal);
    double xMin = Xrange.getMinRange() - xScale * glyphSize;
    double xMax = Xrange.getMaxRange() + xScale * glyphSize;
    double yMin = Yrange.getMinRange() - yScale * glyphSize;
    double yMax = Yrange.getMaxRange() + yScale * glyphSize;

    domainAxis.setRange(xMin, xMax);

    //rangeAxis.setRange(-maxAbsVal, maxAbsVal);
    rangeAxis.setRange(yMin, yMax);
    Set<SampleInfo> infoSet = new HashSet<SampleInfo>();

    if ((colorBy == ColorByType.IHC_EXPRESSION_X) || (colorBy == ColorByType.IHC_EXPRESSION_Y)) {
        String geneName = null;
        if ((colorBy == ColorByType.IHC_EXPRESSION_X) && (ct1 != ContinuousType.GENE)) {
            logger.info("User attempted to color by ihc x on non gene continuous type.");
            //need to show validation error
            return;
        } else if ((colorBy == ColorByType.IHC_EXPRESSION_Y) && (ct2 != ContinuousType.GENE)) {
            logger.info("User attempted to color by ihc y on non gene continuous type.");
            //need to show validation error
            return;
        } else {
            if (colorBy == ColorByType.IHC_EXPRESSION_X) {
                //parse the gene name from the xLabel
                geneName = xLabel.substring(0, xLabel.indexOf('_'));
            } else if (colorBy == ColorByType.IHC_EXPRESSION_Y) {
                //parse the gene name from the yLabel
                geneName = yLabel.substring(0, yLabel.indexOf('_'));
            }
        }

        //Get the IHC data for the samples to be graphed   
        LevelOfExpressionIHCService loeService = LevelOfExpressionIHCService.getInstance();
        LossOfExpressionIHCService lossService = LossOfExpressionIHCService.getInstance();
        Set<String> sampleIds = new HashSet<String>();
        String labtrackId;
        SampleInfo info;
        for (ISPYPlotPoint corrPoint : dataPoints) {
            info = corrPoint.getSampleInfo();
            if (info != null) {
                labtrackId = corrPoint.getSampleInfo().getLabtrackId();
                sampleIds.add(labtrackId);
                infoSet.add(info);
            } else {
                logger.warn("Point id=" + corrPoint.getId() + " has no sample info. Skipping point");
            }
        }

        Collection<? extends Finding> loeFindings = loeService.getFindingsFromSampleInfo(infoSet);
        Collection<? extends Finding> lossFindings = lossService.getFindingsFromSampleInfo(infoSet);

        List<IHCFinding> findings = new ArrayList<IHCFinding>();

        for (Finding f : loeFindings) {
            findings.add((IHCFinding) f);
        }

        for (Finding f : lossFindings) {
            findings.add((IHCFinding) f);
        }

        //        Need to handle mapping names to IHC biomarker names.
        //EGFR (ok), FAK (PTK2), HER2 (ERBB2), Ki-67, P53, bcl2 (ok), p27, CYCLIN_D1 (CCND1)
        //Translate the gene names into the biomarker names 
        //used by ihc. This code should be removed once protein biomarker
        //alias is implmented.
        String ihcBiomarker = geneName;
        if (geneName.equalsIgnoreCase("PTK2")) {
            ihcBiomarker = "FAK";
            ihcBiomarkerType = IHCBiomarkerType.FAK;
        } else if (geneName.equalsIgnoreCase("ERBB2")) {
            ihcBiomarker = "HER2";
            ihcBiomarkerType = IHCBiomarkerType.HER2;
        } else if (geneName.equalsIgnoreCase("MKI67")) {
            //need to check this one
            ihcBiomarker = "Ki-67";
            ihcBiomarkerType = IHCBiomarkerType.KI67;
        } else if (geneName.equalsIgnoreCase("TP53")) {
            ihcBiomarker = "P53";
            ihcBiomarkerType = IHCBiomarkerType.P53;
        } else if (geneName.equalsIgnoreCase("Cdkn1b")) {
            ihcBiomarker = "P27";
            ihcBiomarkerType = IHCBiomarkerType.P27;
        } else if (geneName.equalsIgnoreCase("BCL2")) {
            ihcBiomarker = "BCL2";
            ihcBiomarkerType = IHCBiomarkerType.BCL2;
        } else if (geneName.equalsIgnoreCase("EGFR")) {
            ihcBiomarker = "EGFR";
            ihcBiomarkerType = IHCBiomarkerType.EGFR;
        } else if (geneName.equalsIgnoreCase("CCND1")) {
            ihcBiomarker = "CYCLIN_D1";
            ihcBiomarkerType = IHCBiomarkerType.CYCLIN_D1;
        }

        List<IHCFinding> filteredList = getIHCFindingsForBiomarker(findings, ihcBiomarker);

        //TEST Case
        //          Set<String> testIds = new HashSet<String>();
        //          testIds.add("212833");
        //          testIds.add("213152");

        //Collection<? extends Finding> loeFindings = loeService.getFindingsFromSampleIds(testIds);

        //Collection<? extends Finding> lossFindings = lossService.getFindingsFromSampleIds(sampleIds);

        ihcData = new HashMap<String, List<IHCFinding>>();
        IHCFinding loeFinding;
        List<IHCFinding> findingList;
        Specimen specimen = null;
        String patientDID = null;
        for (Finding finding : filteredList) {
            loeFinding = (IHCFinding) finding;
            specimen = loeFinding.getSpecimen();
            if ((specimen != null) && (specimen.getPatientDID() != null)) {
                patientDID = specimen.getPatientDID();
                findingList = ihcData.get(patientDID);

                if (findingList == null) {
                    findingList = new ArrayList<IHCFinding>();
                    ihcData.put(patientDID, findingList);
                }

                findingList.add(loeFinding);
            } else {
                logger.warn(
                        "loeFinding id=" + loeFinding.getId() + " has null specimen or patientDID. Skipping..");
            }

        }
        //          IHCFinding lossFinding;
        //          for (Finding finding : lossFindings) {
        //           lossFinding = (IHCFinding) finding;
        //            ihcData.put(lossFinding.getId(), lossFinding);
        //          }

    }

    createGlyphsAndAddToPlot(plot, xScale, yScale);

    // Paint p = new GradientPaint(0, 0, Color.white, 1000, 0, Color.green);
    //try and match the UI e9e9e9
    Paint p = new Color(233, 233, 233);

    corrChart.setBackgroundPaint(p);

    buildLegend();

}

From source file:grafix.graficos.indices.IndiceADX.java

@Override
public void plotar(final XYPlot plot, final JanelaGraficos janela, final int contador) {
    XYLineAndShapeRenderer r = new XYLineAndShapeRenderer();
    r.setSeriesLinesVisible(0, true);//from   w  w  w.j  av a 2 s .com
    r.setSeriesShapesVisible(0, false);
    r.setSeriesPaint(0, Color.BLUE);
    r.setSeriesStroke(0, new BasicStroke(.75f));

    r.setSeriesPaint(1, Color.RED);
    r.setSeriesStroke(1, new BasicStroke(.6f, BasicStroke.CAP_ROUND, BasicStroke.JOIN_ROUND, 1.0f,
            new float[] { 3.0f, 4.0f }, 0.0f));
    r.setSeriesLinesVisible(1, true);
    r.setSeriesShapesVisible(1, false);

    r.setSeriesPaint(2, new Color(0f, .6f, 0f));
    r.setSeriesStroke(2, new BasicStroke(.6f, BasicStroke.CAP_ROUND, BasicStroke.JOIN_ROUND, 2.0f,
            new float[] { 3.0f, 4.0f }, 0.0f));
    r.setSeriesLinesVisible(2, true);
    r.setSeriesShapesVisible(2, false);

    r.setToolTipGenerator(new IndiceToolTipGenerator(this));
    plot.setRenderer(contador, r);
    plot.setDataset(contador, getDataSet(janela));
}

From source file:gov.nih.nci.caintegrator.ui.graphing.chart.plot.KaplanMeierPlot.java

private void createChart(XYDataset dataset) {
    //Create the chart, dropping in the data set
    JFreeChart chart = ChartFactory.createXYLineChart("", "Days in Study", "Probability of Survival", dataset,
            PlotOrientation.VERTICAL, false, //legend
            true, //tooltips
            false//urls
    );/*w ww  .  j a  va2  s .  c om*/
    LegendTitle legend = chart.getLegend();
    XYPlot plot = (XYPlot) chart.getPlot();
    /********************************************************
     * IMPORTANT:
     * Ideally I would create the actual Renderer settings for
     * the at the time I start to march through the 
     * KaplanMeierPlotPointSeriesSets, adding them to the actual
     * Data Set that is going to be going into the Chart plotter.
     * But you have no idea how they are going to be sitting in
     * the Plot dataset so there is no guarantee that setting the
     * renderer based on a supposed index will actually work. In fact
     * it didn't work when I wrote this.
     * 
     */
    XYLineAndShapeRenderer renderer = new XYLineAndShapeRenderer();
    for (int i = 0; i < finalDataCollection.getSeriesCount(); i++) {
        KaplanMeierPlotPointSeries kmSeries = (KaplanMeierPlotPointSeries) finalDataCollection.getSeries(i);
        if (kmSeries.getType() == SeriesType.CENSOR) {
            renderer.setSeriesLinesVisible(i, false);
            renderer.setSeriesShapesVisible(i, true);
        } else if (kmSeries.getType() == SeriesType.PROBABILITY) {
            renderer.setSeriesLinesVisible(i, true);
            renderer.setSeriesShapesVisible(i, false);

        } else {
            //don't show this set as it is not a known type
            renderer.setSeriesLinesVisible(i, false);
            renderer.setSeriesShapesVisible(i, false);
        }
        renderer.setSeriesPaint(i, getKMSetColor(kmSeries.getKey(), kmSeries.getType()), true);
    }

    renderer.setToolTipGenerator(new StandardXYToolTipGenerator());
    renderer.setDefaultEntityRadius(6);
    plot.setRenderer(renderer);
    //change the auto tick unit selection to integer units only...
    NumberAxis rangeAxis = (NumberAxis) plot.getRangeAxis();
    rangeAxis.setStandardTickUnits(NumberAxis.createStandardTickUnits());
    // OPTIONAL CUSTOMISATION COMPLETED.
    rangeAxis.setAutoRange(true);
    rangeAxis.setRange(0.0, 1.0);
    kmChart = chart;
}

From source file:net.nosleep.superanalyzer.analysis.views.YearView.java

private void createChart() {

    NumberAxis xAxis = new NumberAxis(Misc.getString("RELEASE_YEAR"));
    xAxis.setAutoRangeIncludesZero(false);

    NumberAxis yAxis = new NumberAxis(Misc.getString("SONG_COUNT"));
    yAxis.setAutoRangeIncludesZero(true);

    xAxis.setNumberFormatOverride(new DecimalFormat("0"));

    XYLineAndShapeRenderer renderer = new XYLineAndShapeRenderer();
    XYPlot plot = new XYPlot(_dataset, xAxis, yAxis, renderer);

    // create and return the chart panel...
    _chart = new JFreeChart(Misc.getString("RELEASE_YEAR"), JFreeChart.DEFAULT_TITLE_FONT, plot, true);

    plot.setBackgroundPaint(Color.lightGray);
    plot.setDomainGridlinePaint(Color.white);

    plot.setDomainGridlinesVisible(false);
    plot.setRangeGridlinesVisible(false);
    plot.setAxisOffset(new RectangleInsets(4, 4, 4, 4));

    LegendTitle legend = _chart.getLegend();
    legend.setFrame(BlockBorder.NONE);//from w  w  w .j av a 2s.  c  om

    _chart.addSubtitle(HomePanel.createSubtitle(Misc.getString("RELEASE_YEAR_TOOLTIP")));

    XYToolTipGenerator generator = new StandardXYToolTipGenerator("{2}", new DecimalFormat("0.00"),
            new DecimalFormat("0.00"));
    renderer.setToolTipGenerator(generator);

    ChartUtilities.applyCurrentTheme(_chart);

    // format the lines after applying the theme
    renderer.setBaseShapesVisible(true);
    renderer.setDrawOutlines(true);
    renderer.setUseFillPaint(true);
    renderer.setBaseFillPaint(Color.white);
    renderer.setSeriesStroke(0, new BasicStroke(3.0f));
    renderer.setSeriesOutlineStroke(0, new BasicStroke(2.0f));
    renderer.setSeriesShape(0, new Ellipse2D.Double(-4.0, -4.0, 8.0, 8.0));

    renderer.setSeriesStroke(1, new BasicStroke(3.0f));
    renderer.setSeriesOutlineStroke(1, new BasicStroke(2.0f));
    renderer.setSeriesShape(1, new Rectangle2D.Double(-3.0, -3.0, 6.0, 6.0));

    _chart.setPadding(new RectangleInsets(10, 10, 10, 10));

    Misc.formatChart(plot);
}