List of usage examples for org.apache.commons.cli CommandLine getArgList
public List getArgList()
From source file:com.aliyun.odps.mapred.bridge.streaming.StreamJob.java
void parseArgv() { CommandLine cmdLine = null; try {/* w w w. j a v a 2 s . c o m*/ cmdLine = parser.parse(allOptions, argv_); } catch (Exception oe) { LOG.error(oe.getMessage()); exitUsage(argv_.length > 0 && "-info".equals(argv_[0])); } if (cmdLine == null) { exitUsage(argv_.length > 0 && "-info".equals(argv_[0])); return; } @SuppressWarnings("unchecked") List<String> args = cmdLine.getArgList(); if (args != null && args.size() > 0) { fail("Found " + args.size() + " unexpected arguments on the " + "command line " + args); } detailedUsage_ = cmdLine.hasOption("info"); if (cmdLine.hasOption("help") || detailedUsage_) { printUsage = true; return; } verbose_ = cmdLine.hasOption("verbose"); background_ = cmdLine.hasOption("background"); debug_ = cmdLine.hasOption("debug") ? debug_ + 1 : debug_; output_ = cmdLine.getOptionValue("output"); comCmd_ = cmdLine.getOptionValue("combiner"); redCmd_ = cmdLine.getOptionValue("reducer"); lazyOutput_ = cmdLine.hasOption("lazyOutput"); String[] values = cmdLine.getOptionValues("file"); SessionState ss = SessionState.get(); MetaExplorer metaExplorer = new MetaExplorerImpl(ss.getOdps()); Map<String, String> aliasToTempResource = new HashMap<String, String>(); String padding = "_" + UUID.randomUUID().toString(); if (values != null && values.length > 0) { for (int i = 0; i < values.length; i++) { String file = values[i]; packageFiles_.add(file); try { aliasToTempResource.put(FilenameUtils.getName(file), metaExplorer.addFileResourceWithRetry(file, Resource.Type.FILE, padding, true)); } catch (OdpsException e) { throw new RuntimeException(e); } } config_.set("stream.temp.resource.alias", JSON.toJSONString(aliasToTempResource)); String[] res = config_.getResources(); Set<String> resources = aliasToTempResource.keySet(); if (res != null) { config_.setResources(StringUtils.join(res, ",") + "," + StringUtils.join(resources, ",")); } else { config_.setResources(StringUtils.join(resources, ",")); } } additionalConfSpec_ = cmdLine.getOptionValue("additionalconfspec"); numReduceTasksSpec_ = cmdLine.getOptionValue("numReduceTasks"); partitionerSpec_ = cmdLine.getOptionValue("partitioner"); mapDebugSpec_ = cmdLine.getOptionValue("mapdebug"); reduceDebugSpec_ = cmdLine.getOptionValue("reducedebug"); ioSpec_ = cmdLine.getOptionValue("io"); String[] car = cmdLine.getOptionValues("cacheArchive"); if (null != car) { fail("no -cacheArchive option any more, please use -resources instead."); } String[] caf = cmdLine.getOptionValues("cacheFile"); if (null != caf) { fail("no -cacheFile option any more, please use -resources instead."); } mapCmd_ = cmdLine.getOptionValue("mapper"); String[] cmd = cmdLine.getOptionValues("cmdenv"); if (null != cmd && cmd.length > 0) { for (String s : cmd) { if (addTaskEnvironment_.length() > 0) { addTaskEnvironment_ += " "; } addTaskEnvironment_ += s; } } // per table input config Map<String, Map<String, String>> inputConfigs = new HashMap<String, Map<String, String>>(); String[] columns = null; for (Option opt : cmdLine.getOptions()) { if ("jobconf".equals(opt.getOpt())) { String[] jobconf = opt.getValues(); if (null != jobconf && jobconf.length > 0) { for (String s : jobconf) { String[] parts = s.split("=", 2); config_.set(parts[0], parts[1]); } } } else if ("columns".equals(opt.getOpt())) { String columnsValue = opt.getValue(); if (columnsValue.equals("ALL")) { columns = null; } else { columns = columnsValue.split(","); } } else if ("input".equals(opt.getOpt())) { values = opt.getValues(); if (values != null && values.length > 0) { for (String input : values) { TableInfo ti = parseTableInfo(input); if (columns != null) { ti.setCols(columns); } inputSpecs_.add(ti); String inputKey = (ti.getProjectName() + "." + ti.getTableName()).toLowerCase(); // XXX only apply once per table if (inputConfigs.get(inputKey) != null) { continue; } Map<String, String> inputConfig = new HashMap<String, String>(); inputConfig.put("stream.map.input.field.separator", config_.get("stream.map.input.field.separator", "\t")); // TODO other per table input config: cols, etc. inputConfigs.put(inputKey, inputConfig); } } } } try { config_.set("stream.map.input.configs", JSON.toJSONString(inputConfigs)); } catch (Exception e) { throw new RuntimeException("fail to set input configs"); } }
From source file:com.archivas.clienttools.arcmover.cli.ArcCopy.java
protected void parseArgs() throws ParseException { // create the command cmdLine parser CommandLineParser parser = new PosixParser(); CommandLine cmdLine; // parse the command cmdLine arguments cmdLine = parser.parse(getOptions(), getArgs()); // Help//from www .j a v a 2 s . c o m printHelp = cmdLine.hasOption("h"); if (printHelp) { return; } initializeProfiles(cmdLine.hasOption("insecure")); // See how we are getting the input list: file or from stdin @SuppressWarnings({ "unchecked" }) List<String> argList = cmdLine.getArgList(); // Handle the load schedule and export lists LoadSchedule schedule = LoadSchedule.getDefaultLoadSchedule(); getLoadSchedule(cmdLine, schedule); setUpExportListThread(cmdLine); // See if we are rerunning, set up the job if we are boolean rerunning = handleRerunAndResume(cmdLine, schedule); if (rerunning) { List<String> extraOptions = new ArrayList<String>(); if (cmdLine.hasOption(DESTINATION_PROFILE_OPTION)) { extraOptions.add(DESTINATION_PROFILE_OPTION); } if (cmdLine.hasOption(SOURCE_PROFILE_OPTION)) { extraOptions.add(SOURCE_PROFILE_OPTION); } if (cmdLine.hasOption(DESTINATION_PATH_OPTION)) { extraOptions.add(DESTINATION_PATH_OPTION); } if (cmdLine.hasOption(SOURCE_PATH_OPTION)) { extraOptions.add(SOURCE_PATH_OPTION); } if (cmdLine.hasOption(JOB_NAME)) { extraOptions.add(JOB_NAME); } if (cmdLine.hasOption(HOLD_OPTION)) { extraOptions.add(HOLD_OPTION); } if (cmdLine.hasOption(INDEX_OPTION)) { extraOptions.add(INDEX_OPTION); } if (cmdLine.hasOption(SHRED_OPTION)) { extraOptions.add(SHRED_OPTION); } if (cmdLine.hasOption(RETENTION_OPTION)) { extraOptions.add(RETENTION_OPTION); } if (cmdLine.hasOption(UID_OPTION)) { extraOptions.add(UID_OPTION); } if (cmdLine.hasOption(GID_OPTION)) { extraOptions.add(GID_OPTION); } if (cmdLine.hasOption(FILE_PERMS_OPTION)) { extraOptions.add(FILE_PERMS_OPTION); } if (cmdLine.hasOption(DIR_PERMS_OPTION)) { extraOptions.add(DIR_PERMS_OPTION); } if (cmdLine.hasOption(CUSTOM_METADATA_OPTION)) { extraOptions.add(CUSTOM_METADATA_OPTION); } if (cmdLine.hasOption(ACL_OPTION)) { extraOptions.add(ACL_OPTION); } if (cmdLine.hasOption(OWNER_OPTION)) { extraOptions.add(OWNER_OPTION); } if (cmdLine.hasOption(DOMAIN_OPTION)) { extraOptions.add(DOMAIN_OPTION); } if (cmdLine.hasOption(IGNORE_CONFLICTS)) { extraOptions.add(IGNORE_CONFLICTS); } if (!extraOptions.isEmpty()) { throw new ParseException("The following supplied options are not allowed with --" + RESUME + " or --" + RERUN + ": " + extraOptions); } // The list_file is not allowed for rerun/resume if (argList.size() > numCmdLineArgs - 1) { throw new ParseException( "The list_file argument is not allowed with --" + RESUME + " or --" + RERUN); } } else { if (argList.size() != numCmdLineArgs) { throw new ParseException("Missing argument list_file."); } String listFileName = argList.get(numCmdLineArgs - 1); // Required fields List<String> missingRequiredOptions = new ArrayList<String>(); if (!cmdLine.hasOption("s")) { missingRequiredOptions.add("s"); } if (!cmdLine.hasOption("d")) { missingRequiredOptions.add("d"); } if (!cmdLine.hasOption(DESTINATION_PATH_OPTION)) { missingRequiredOptions.add(DESTINATION_PATH_OPTION); } // Print a friendly string if we are missing more than one require options if (missingRequiredOptions.size() > 1) { throw new ParseException("Missing required options: " + missingRequiredOptions); } // Parse require options String srcProfileName = getProfileNameFromCmdLineAndValidateExistance(cmdLine, "s"); String tarProfileName = getProfileNameFromCmdLineAndValidateExistance(cmdLine, "d"); AbstractProfileBase srcProfile = ProfileManager.getProfileByName(srcProfileName); AbstractProfileBase dstProfile = ProfileManager.getProfileByName(tarProfileName); String targetPath = validateTargetPath(cmdLine); // Optional fields String sourcePath = null; if (cmdLine.hasOption(SOURCE_PATH_OPTION)) { sourcePath = cmdLine.getOptionValue(SOURCE_PATH_OPTION); } String jobName = null; if (cmdLine.hasOption(JOB_NAME)) { jobName = cmdLine.getOptionValue(JOB_NAME); } FileMetadata metadata = new FileMetadata(); // We ignore the metadata on the commandline going hcp to hcp unless the user has // cli.override_metadata // set to true in their user.properties file. This is a special hook for service. boolean goingFromLFSToHCP = srcProfile.getType() == ProfileType.FILESYSTEM && dstProfile.getType() != ProfileType.FILESYSTEM; boolean isCLIMetadataOverrideEnabled = Boolean.parseBoolean(HCPMoverProperties.CLI_OVERRIDE_MD.get()); if (goingFromLFSToHCP || isCLIMetadataOverrideEnabled) { if (cmdLine.hasOption(INDEX_OPTION)) { metadata.setSearchIndex(new Boolean(cmdLine.getOptionValue(INDEX_OPTION))); } if (cmdLine.hasOption(HOLD_OPTION)) { metadata.setRetentionHold(new Boolean(cmdLine.getOptionValue(HOLD_OPTION))); } if (cmdLine.hasOption(SHRED_OPTION)) { metadata.setShred(new Boolean(cmdLine.getOptionValue(SHRED_OPTION))); } if (cmdLine.hasOption(RETENTION_OPTION)) { String cmdLineRetentionValue = cmdLine.getOptionValue(RETENTION_OPTION); Retention retention = Retention.fromHcapValue(cmdLineRetentionValue); metadata.setRetention(retention); } if (cmdLine.hasOption(CUSTOM_METADATA_OPTION)) { CustomMetadata customMetadata = new CustomMetadata(CustomMetadata.Form.FILE, cmdLine.getOptionValue(CUSTOM_METADATA_OPTION)); metadata.setCustomMetadata(customMetadata); } if (cmdLine.hasOption(ACL_OPTION)) { if (dstProfile.supportsACLs()) { ACLMetadata acl = new ACLMetadata(CustomMetadata.Form.FILE, cmdLine.getOptionValue(ACL_OPTION)); metadata.setACL(acl); } else { throw new ParseException("The " + ACL_OPTION + " may only be specified when copying from the local file system to a HCP 5.0 or later namespace."); } } if (dstProfile.supportsPosixSettings()) { if (cmdLine.hasOption(UID_OPTION)) { metadata.setUid(cmdLine.getOptionValue(UID_OPTION)); } if (cmdLine.hasOption(GID_OPTION)) { metadata.setGid(cmdLine.getOptionValue(GID_OPTION)); } if (cmdLine.hasOption(FILE_PERMS_OPTION)) { metadata.setFileMode(new Integer(cmdLine.getOptionValue(FILE_PERMS_OPTION))); } if (cmdLine.hasOption(DIR_PERMS_OPTION)) { metadata.setDirMode(new Integer(cmdLine.getOptionValue(DIR_PERMS_OPTION))); } } else { List<String> extraOptions = new ArrayList<String>(); if (cmdLine.hasOption(UID_OPTION)) { extraOptions.add(UID_OPTION); } if (cmdLine.hasOption(GID_OPTION)) { extraOptions.add(GID_OPTION); } if (cmdLine.hasOption(FILE_PERMS_OPTION)) { extraOptions.add(FILE_PERMS_OPTION); } if (cmdLine.hasOption(DIR_PERMS_OPTION)) { extraOptions.add(DIR_PERMS_OPTION); } if (!extraOptions.isEmpty()) { throw new ParseException( "The following supplied options are only allowed when copying from the local file system to either HCAP 2.x or the default namespace on HCP 3.0 or later: " + extraOptions); } } // throw an exception if anonymous user tries to set owner for objects if (dstProfile.isAnonymousAccess()) { if (cmdLine.hasOption(OWNER_OPTION)) { throw new ParseException("Cannot use owner option with an anonymous namespace profile."); } } if (dstProfile.supportsOwner()) { if (cmdLine.hasOption(OWNER_OPTION)) { Owner owner; if (cmdLine.hasOption(DOMAIN_OPTION)) { owner = new Owner(cmdLine.getOptionValue(OWNER_OPTION), cmdLine.getOptionValue(DOMAIN_OPTION)); } else { String ownerName = cmdLine.getOptionValue(OWNER_OPTION); if (ownerName.length() == 0) { owner = new Owner(Owner.OwnerType.PUBLIC); } else { owner = new Owner(ownerName); } } metadata.setOwner(owner); } } else { List<String> extraOptions = new ArrayList<String>(); if (cmdLine.hasOption(OWNER_OPTION)) { extraOptions.add(OWNER_OPTION); } if (cmdLine.hasOption(DOMAIN_OPTION)) { extraOptions.add(DOMAIN_OPTION); } if (!extraOptions.isEmpty()) { throw new ParseException( "The following supplied options are only allowed when copying from the local file system to an HCP 5.0 or later namespace: " + extraOptions); } } } else { List<String> extraOptions = new ArrayList<String>(); if (cmdLine.hasOption(HOLD_OPTION)) { extraOptions.add(HOLD_OPTION); } if (cmdLine.hasOption(INDEX_OPTION)) { extraOptions.add(INDEX_OPTION); } if (cmdLine.hasOption(SHRED_OPTION)) { extraOptions.add(SHRED_OPTION); } if (cmdLine.hasOption(RETENTION_OPTION)) { extraOptions.add(RETENTION_OPTION); } if (cmdLine.hasOption(UID_OPTION)) { extraOptions.add(UID_OPTION); } if (cmdLine.hasOption(GID_OPTION)) { extraOptions.add(GID_OPTION); } if (cmdLine.hasOption(FILE_PERMS_OPTION)) { extraOptions.add(FILE_PERMS_OPTION); } if (cmdLine.hasOption(DIR_PERMS_OPTION)) { extraOptions.add(DIR_PERMS_OPTION); } if (cmdLine.hasOption(CUSTOM_METADATA_OPTION)) { extraOptions.add(CUSTOM_METADATA_OPTION); } if (cmdLine.hasOption(ACL_OPTION)) { extraOptions.add(ACL_OPTION); } if (cmdLine.hasOption(OWNER_OPTION)) { extraOptions.add(OWNER_OPTION); } if (cmdLine.hasOption(DOMAIN_OPTION)) { extraOptions.add(DOMAIN_OPTION); } if (!extraOptions.isEmpty()) { throw new ParseException( "The following supplied options are only allowed when copying from the local file system to HCP: " + extraOptions); } } boolean ignoreConflicts = cmdLine.hasOption(IGNORE_CONFLICTS); // Validate the input file if one was provided try { FileListParser.validateFile(new File(listFileName), srcProfile, sourcePath, targetPath); } catch (IOException e) { throw new ParseException("Error parsing input file. Msg: " + e.getMessage()); } catch (FileListParserException e) { throw new ParseException("Error parsing input file. Msg: " + e.getMessage()); } // Setup the job with the arguments try { setupCopyJob(listFileName, dstProfile, targetPath, srcProfile, sourcePath, jobName, metadata, ignoreConflicts, schedule); managedJobImpl = arcMover.createManagedJob(managedJob); } catch (IllegalArgumentException e) { throw new ParseException( "IllegalArgumentException writing to database during file list parsing. Msg: " + e.getMessage()); } catch (DatabaseException e) { throw new ParseException( "DatabaseException writing to database during file list parsing. Msg: " + e.getMessage()); } catch (JobException e) { throw new ParseException( "JobException writing to database during file list parsing. Msg: " + e.getMessage()); } } }
From source file:net.jsign.PESignerCLI.java
void execute(String... args) throws SignerException { DefaultParser parser = new DefaultParser(); try {//from w w w. j a v a 2 s .co m CommandLine cmd = parser.parse(options, args); if (cmd.hasOption("help") || args.length == 0) { printHelp(); return; } File keystore = cmd.hasOption("keystore") ? new File(cmd.getOptionValue("keystore")) : null; String storepass = cmd.getOptionValue("storepass"); String storetype = cmd.getOptionValue("storetype"); String alias = cmd.getOptionValue("alias"); String keypass = cmd.getOptionValue("keypass"); File keyfile = cmd.hasOption("keyfile") ? new File(cmd.getOptionValue("keyfile")) : null; File certfile = cmd.hasOption("certfile") ? new File(cmd.getOptionValue("certfile")) : null; String tsaurl = cmd.getOptionValue("tsaurl"); String tsmode = cmd.getOptionValue("tsmode"); String algorithm = cmd.getOptionValue("alg"); String name = cmd.getOptionValue("name"); String url = cmd.getOptionValue("url"); File file = cmd.getArgList().isEmpty() ? null : new File(cmd.getArgList().get(0)); if (keystore != null && storetype == null) { // guess the type of the keystore from the extension of the file String filename = keystore.getName().toLowerCase(); if (filename.endsWith(".p12") || filename.endsWith(".pfx")) { storetype = "PKCS12"; } else { storetype = "JKS"; } } PrivateKey privateKey; Certificate[] chain; // some exciting parameter validation... if (keystore == null && keyfile == null && certfile == null) { throw new SignerException("keystore option, or keyfile and certfile options must be set"); } if (keystore != null && (keyfile != null || certfile != null)) { throw new SignerException("keystore option can't be mixed with keyfile or certfile"); } if (keystore != null) { // JKS or PKCS12 keystore KeyStore ks; try { ks = KeyStore.getInstance(storetype); } catch (KeyStoreException e) { throw new SignerException("keystore type '" + storetype + "' is not supported", e); } if (!keystore.exists()) { throw new SignerException("The keystore " + keystore + " couldn't be found"); } FileInputStream in = null; try { in = new FileInputStream(keystore); ks.load(in, storepass != null ? storepass.toCharArray() : null); } catch (Exception e) { throw new SignerException("Unable to load the keystore " + keystore, e); } finally { try { if (in != null) { in.close(); } } catch (IOException e) { // ignore } } if (alias == null) { throw new SignerException("alias option must be set"); } try { chain = ks.getCertificateChain(alias); } catch (KeyStoreException e) { throw new SignerException(e.getMessage(), e); } if (chain == null) { throw new SignerException( "No certificate found under the alias '" + alias + "' in the keystore " + keystore); } char[] password = keypass != null ? keypass.toCharArray() : storepass.toCharArray(); try { privateKey = (PrivateKey) ks.getKey(alias, password); } catch (Exception e) { throw new SignerException("Failed to retrieve the private key from the keystore", e); } } else { // separate private key and certificate files (PVK/SPC) if (keyfile == null) { throw new SignerException("keyfile option must be set"); } if (!keyfile.exists()) { throw new SignerException("The keyfile " + keyfile + " couldn't be found"); } if (certfile == null) { throw new SignerException("certfile option must be set"); } if (!certfile.exists()) { throw new SignerException("The certfile " + certfile + " couldn't be found"); } // load the certificate chain try { chain = loadCertificateChain(certfile); } catch (Exception e) { throw new SignerException("Failed to load the certificate from " + certfile, e); } // load the private key try { privateKey = PVK.parse(keyfile, keypass); } catch (Exception e) { throw new SignerException("Failed to load the private key from " + keyfile, e); } } if (algorithm != null && DigestAlgorithm.of(algorithm) == null) { throw new SignerException("The digest algorithm " + algorithm + " is not supported"); } if (file == null) { throw new SignerException("missing file argument"); } if (!file.exists()) { throw new SignerException("The file " + file + " couldn't be found"); } PEFile peFile; try { peFile = new PEFile(file); } catch (IOException e) { throw new SignerException("Couldn't open the executable file " + file, e); } // and now the actual work! PESigner signer = new PESigner(chain, privateKey).withProgramName(name).withProgramURL(url) .withDigestAlgorithm(DigestAlgorithm.of(algorithm)) .withTimestamping(tsaurl != null || tsmode != null) .withTimestampingMode(TimestampingMode.of(tsmode)).withTimestampingAutority(tsaurl); try { System.out.println("Adding Authenticode signature to " + file); signer.sign(peFile); } catch (Exception e) { throw new SignerException("Couldn't sign " + file, e); } finally { try { peFile.close(); } catch (IOException e) { System.err.println("Couldn't close " + file); e.printStackTrace(System.err); } } } catch (ParseException e) { e.printStackTrace(); } }
From source file:edu.uci.ics.asterix.aoya.AsterixYARNClient.java
/** * Initialize the mode of the client from the arguments. * // ww w . j a v a 2 s .co m * @param args * @param cliParser * @throws ParseException */ private void initMode(String[] args, CommandLine cliParser) throws ParseException { @SuppressWarnings("unchecked") List<String> clientVerb = cliParser.getArgList(); String message = null; //Now check if there is a mode if (clientVerb == null || clientVerb.size() < 1) { message = "You must specify an action."; } //But there can only be one mode... else if (clientVerb.size() > 1) { message = "Trailing arguments, or too many arguments. Only one action may be performed at a time."; } if (message != null) { throw new ParseException(message); } //Now we can initialize the mode and check it against parameters mode = Mode.fromAlias(clientVerb.get(0)); if (mode == null) { mode = Mode.NOOP; } }
From source file:com.netcrest.pado.tools.pado.command.temporal.java
@SuppressWarnings({ "unchecked", "rawtypes" })
@Override//from w w w . j a v a 2 s . co m
public void run(CommandLine commandLine, String command) throws Exception {
boolean isLucene = commandLine.hasOption("lucene");
boolean isEnable = commandLine.hasOption("enable");
boolean isDisable = commandLine.hasOption("disable");
boolean isAll = commandLine.hasOption("all");
if (isAll && (isLucene == false && isEnable == false && isDisable == false)) {
PadoShell.printlnError(this,
"Invalid option. '-all' only applies to '-lucene', '-enable', and '-disable'.");
return;
}
List<String> argList = (List<String>) commandLine.getArgList();
if (isLucene || isEnable || isDisable) {
// Build Lucene indexes
// Parse [-all [-grid <grid ID>[,...]] | [<path>...]]
String[] gridIds = PadoShellUtil.getGridIds(this, commandLine, true);
if (gridIds == null) {
return;
}
String fullPaths[] = PadoShellUtil.getFullPaths(padoShell, commandLine);
if (PadoShellUtil.hasError(this, padoShell, fullPaths, true)) {
return;
}
if (isLucene) {
runLucene(gridIds, fullPaths);
} else {
setTemporalEnabled(isEnable, gridIds, fullPaths);
}
} else {
// Execute temporal command
String path;
if (argList.size() == 1) {
path = padoShell.getCurrentPath();
} else {
path = argList.get(1);
}
String fullPath = padoShell.getFullPath(path);
String gridId = SharedCache.getSharedCache().getGridId(fullPath);
String gridPath = GridUtil.getChildPath(fullPath);
String fullPaths[] = PadoShellUtil.getFullPaths(padoShell, commandLine);
if (fullPaths == null) {
fullPaths = new String[] { fullPath };
}
if (PadoShellUtil.hasError(this, padoShell, fullPaths, false)) {
return;
}
ITemporalBiz temporalBiz = SharedCache.getSharedCache().getPado().getCatalog()
.newInstance(ITemporalBiz.class, gridPath);
temporalBiz.getBizContext().getGridContextClient().setGridIds(gridId);
temporalBiz.setGridPath(gridPath);
rawFormat = false;
if (commandLine.hasOption("put")) {
runPut(temporalBiz, commandLine.getOptionValues("put"));
} else if (commandLine.hasOption("putAttachments")) {
runPutAttachments(temporalBiz, commandLine.getOptionValues("putAttachments"));
} else if (commandLine.hasOption("get")) {
runGet(temporalBiz, commandLine.getOptionValues("get"));
} else if (commandLine.hasOption("getAttachments1")) {
runGetAttachments1(temporalBiz, commandLine.getOptionValues("getAttachments1"));
} else if (commandLine.hasOption("getAttachments2")) {
runGetAttachments2(temporalBiz, commandLine.getOptionValues("getAttachments2"));
} else if (commandLine.hasOption("getAttachments3")) {
runGetAttachments3(temporalBiz, commandLine.getOptionValues("getAttachments3"));
} else if (commandLine.hasOption("remove")) {
runRemove(temporalBiz, commandLine.getOptionValues("remove"));
} else if (commandLine.hasOption("history")) {
if (commandLine.hasOption("rawformat")) {
rawFormat = true;
} else {
rawFormat = false;
}
runHistory(temporalBiz, commandLine.getOptionValue("history"));
} else {
boolean isRefresh = commandLine.hasOption("-refresh");
IScrollableResultSet srs = temporalBiz.getEntryResultSet(System.currentTimeMillis(), null, true,
padoShell.getFetchSize(), isRefresh);
srs.setFetchSize(padoShell.getFetchSize());
ResultSetDisplay.display(srs);
}
}
}
From source file:de.uni_rostock.goodod.tools.Configuration.java
private HierarchicalConfiguration getConfigMap(String args[]) { CombinedConfiguration cfg = new CombinedConfiguration(); HierarchicalConfiguration envCfg = new CombinedConfiguration(); String repoRoot = System.getenv("GOODOD_REPO_ROOT"); boolean helpMode = false; envCfg.addProperty("repositoryRoot", repoRoot); if (null == args) { return cfg; }/* w ww . j a va2s .co m*/ GnuParser cmdLineParser = new GnuParser(); CommandLine cmdLine = null; try { // parse the command line arguments cmdLine = cmdLineParser.parse(options, args); } catch (ParseException exception) { logger.fatal("Could not validate command-line.", exception); System.exit(1); } if (cmdLine.hasOption('c')) { envCfg.addProperty("configFile", cmdLine.getOptionValue('c')); } if (cmdLine.hasOption('t')) { envCfg.addProperty("threadCount", cmdLine.getOptionObject('t')); } if (cmdLine.hasOption('s')) { envCfg.addProperty("similarity", cmdLine.getOptionValue('s')); } if (cmdLine.hasOption('h')) { envCfg.addProperty("helpMode", true); helpMode = true; } if (cmdLine.hasOption('d')) { envCfg.addProperty("debug", true); } if (cmdLine.hasOption('1')) { envCfg.addProperty("one-way", true); } //Fetch the remaining arguments, but alas, commons-cli is not generics aware @SuppressWarnings("unchecked") List<String> argList = cmdLine.getArgList(); HierarchicalConfiguration testConfig = null; try { if (argList.isEmpty() && (false == helpMode)) { logger.fatal("No test specification provided."); System.exit(1); } else if (1 == argList.size()) { File testFile = new File(argList.get(0)); testConfig = readTestConfig(testFile); assert (null != testConfig); envCfg.addProperty("testFile", testFile.toString()); } else if (false == helpMode) { /* * For > 1 file, we assume that both are ontologies and we * construct ourselves a test case configuration for them. */ testConfig = new HierarchicalConfiguration(); String ontologyA = argList.get(0); String ontologyB = argList.get(1); testConfig.addProperty("testName", "Comparison of " + ontologyA + " and " + ontologyB); testConfig.addProperty("notInRepository", true); Node studentOntologies = new Node("studentOntologies"); Node groupA = new Node("groupA", Collections.singletonList(ontologyA)); Node groupB = new Node("groupB", Collections.singletonList(ontologyB)); studentOntologies.addChild(groupA); studentOntologies.addChild(groupB); testConfig.getRoot().addChild(studentOntologies); if (2 < argList.size()) { logger.warn("Ignoring extra arguments to comparison between individual ontologies."); } envCfg.addProperty("testFile", "unknown.plist"); } } catch (Throwable t) { logger.fatal("Could not load test configuration.", t); System.exit(1); } cfg.addConfiguration(envCfg, "environment"); if (false == helpMode) { cfg.addConfiguration(testConfig, "TestSubTree", "testDescription"); } return cfg; }
From source file:com.trsst.Command.java
public int doBegin(String[] argv, PrintStream out, InputStream in) { buildOptions(argv, out, in);/*from ww w . j av a2s.c om*/ int result = 0; Server server = null; try { CommandLineParser argParser = new GnuParser(); CommandLine commands; try { commands = argParser.parse(mergedOptions, argv); } catch (Throwable t) { log.error("Unexpected error parsing arguments: " + Arrays.asList(argv), t); return 127; } LinkedList<String> arguments = new LinkedList<String>(); for (Object o : commands.getArgList()) { arguments.add(o.toString()); // dodge untyped param warning } if (commands.hasOption("?")) { printAllUsage(); return 0; } if (arguments.size() < 1) { printAllUsage(); return 127; // "command not found" } if (!commands.hasOption("strict")) { // most trsst nodes run with self-signed certificates, // so by default we accept them Common.enableAnonymousSSL(); } else { System.err.println("Requiring signed SSL"); } // System.out.println("Commands: " + arguments ); String mode = arguments.removeFirst().toString(); // for port requests if ("serve".equals(mode)) { // start a server and exit result = doServe(commands, arguments); return 0; } // attempt to parse next argument as a server url Client client = null; if (commands.hasOption("h")) { String host = commands.getOptionValue("h"); try { URL url = new URL(host); // this argument is a server url client = new Client(url); System.err.println("Using service: " + host); } catch (MalformedURLException e) { // otherwise: ignore and continue System.err.println("Bad hostname: " + host); } } // if a server url wasn't specified if (client == null) { // start a client with a local server server = new Server(); client = new Client(server.getServiceURL()); System.err.println("Starting temporary service at: " + server.getServiceURL()); } if ("pull".equals(mode)) { // pull feeds from server result = doPull(client, commands, arguments, out); } else if ("push".equals(mode)) { // push feeds to server result = doPush(client, commands, arguments, out); } else if ("post".equals(mode)) { // post (and push) entries result = doPost(client, commands, arguments, out, in); } else { printAllUsage(); result = 127; // "command not found" } } catch (Throwable t) { log.error("Unexpected error: " + t, t); result = 1; // "catchall for general errors" } if (server != null) { server.stop(); } return result; }
From source file:biomine.bmvis2.Vis.java
private void createGUI(String title) { // try { // System.setProperty("com.apple.macosx.AntiAliasedTextOn", "false"); // System.setProperty("com.apple.macosx.AntiAliasedGraphicsOn", // "false"); // } catch (Throwable t) { // // Ignore property exceptions // }/*ww w.j a va 2 s. c o m*/ // try { // System.setProperty("sun.java2d.opengl", "true"); // } catch (Throwable t) { // // Ignore property exceptions // } this.setLayout(new GridLayout()); this.tabs = new TabbedPaneHiddenBar(); this.getContentPane().add(tabs); this.tabs.setVisible(true); tabs.addChangeListener(new ChangeListener() { public void stateChanged(ChangeEvent arg0) { GraphTab tab = (GraphTab) tabs.getSelectedComponent(); if (tab == null) { Logging.info("ui", "No graphs open, creating the default menu."); Vis.this.setJMenuBar(getDefaultMenu()); } else { Vis.this.setJMenuBar(tab.getMenuBar()); } } }); if (appletContext == null) { Options opts = new Options(); CommandLineParser parser = new PosixParser(); CommandLine cmd = null; opts.addOption("h", "help", false, "Show help."); opts.addOption("s", "simple", false, "Show simple UI without side panes"); opts.addOption("logcategories", true, "Logging categories delimited by spaces, all for all"); opts.addOption("loglevel", true, "Logging level: 0 for debug, 1 for info, 2 for warning, 3 for error"); opts.addOption("d", "debug", false, "Shorthand for logcategories all, loglevel -1"); try { cmd = parser.parse(opts, args); } catch (ParseException e) { System.err.println(e.getLocalizedMessage()); System.err.println(); Vis.printCmdLineHelp(opts); System.exit(1); } if (cmd.hasOption("-h") || cmd.getArgList().size() == 0) { Vis.printCmdLineHelp(opts); System.exit(0); } if (cmd.hasOption("-s")) this.properties.put("simple", "true"); if (cmd.hasOption("-d")) { Logging.init(new ArrayList<String>(Arrays.asList("all")), -1); } else { ArrayList<String> logCategories = null; Integer logLevel = null; if (cmd.hasOption("logcategories")) logCategories = new ArrayList<String>( Arrays.asList(cmd.getOptionValue("logcategories").split(","))); if (cmd.hasOption("loglevel")) logLevel = Integer.parseInt(cmd.getOptionValue("loglevel")); if (logCategories != null || logLevel != null) Logging.init(logCategories, logLevel); } VisFrame frame = new VisFrame("BMVIS II"); this.visFrame = frame; frame.add(this); boolean noneOpened = true; for (Object arg : cmd.getArgList()) { if (this.openTab((String) arg) != null) noneOpened = false; } if (noneOpened && cmd.getArgList().size() > 0) { String message = "No files could be opened! Exiting."; Logging.error("graph_reading", message); JOptionPane.showMessageDialog(this, message); System.exit(1); } this.visFrame.setVisible(true); } else { // Applet operation goes here... this.setVisible(true); try { if (getParameter("graph") != null) { String graphFile = getParameter("graph"); URL u = new URL(getCodeBase(), graphFile); InputStream graphStream = u.openConnection().getInputStream(); BMGraph bm = BMGraphUtils.readBMGraph(graphStream); graphStream.close(); this.openTab(new FileGraphSource(bm)); } if (getParameter("json") != null) { String jsonFile = getParameter("json"); URL u = new URL(getCodeBase(), jsonFile); InputStream jsonStream = u.openConnection().getInputStream(); openJSONTab(StreamToString.convertStreamToString(jsonStream), jsonFile); } } catch (IOException e) { Logging.error("graph_reading", e.toString()); JOptionPane.showMessageDialog(this, e.getMessage()); } } }
From source file:com.trsst.Command.java
public int doPost(Client client, CommandLine commands, LinkedList<String> arguments, PrintStream out, InputStream in) {// w ww .j ava 2s . c o m String id = null; if (arguments.size() == 0 && commands.getArgList().size() == 0) { printPostUsage(); return 127; // "command not found" } if (arguments.size() > 0) { id = arguments.removeFirst(); System.err.println("Obtaining keys for feed id: " + id); } else { System.err.println("Generating new feed id... "); } // read input text String subject = commands.getOptionValue("s"); String verb = commands.getOptionValue("v"); String base = commands.getOptionValue("b"); String body = commands.getOptionValue("c"); String name = commands.getOptionValue("n"); String email = commands.getOptionValue("m"); String uri = commands.getOptionValue("uri"); String title = commands.getOptionValue("t"); String subtitle = commands.getOptionValue("subtitle"); String icon = commands.getOptionValue("i"); if (icon == null && commands.hasOption("i")) { icon = "-"; } String logo = commands.getOptionValue("l"); if (logo == null && commands.hasOption("l")) { logo = "-"; } String attach = commands.getOptionValue("a"); if (attach == null && commands.hasOption("a")) { attach = "-"; } String[] recipients = commands.getOptionValues("e"); String[] mentions = commands.getOptionValues("r"); String[] tags = commands.getOptionValues("g"); String url = commands.getOptionValue("u"); String vanity = commands.getOptionValue("vanity"); // obtain password char[] password = null; String pass = commands.getOptionValue("p"); if (pass != null) { password = pass.toCharArray(); } else { try { Console console = System.console(); if (console != null) { password = console.readPassword("Password: "); } else { log.info("No console detected for password input."); } } catch (Throwable t) { log.error("Unexpected error while reading password", t); } } if (password == null) { log.error("Password is required to post."); return 127; // "command not found" } if (password.length < 6) { System.err.println("Password must be at least six characters in length."); return 127; // "command not found" } // obtain keys KeyPair signingKeys = null; KeyPair encryptionKeys = null; String keyPath = commands.getOptionValue("k"); // if id was not specified from the command line if (id == null) { // if password was not specified from command line if (pass == null) { try { // verify password char[] verify = null; Console console = System.console(); if (console != null) { verify = console.readPassword("Re-type Password: "); } else { log.info("No console detected for password verification."); } if (verify == null || verify.length != password.length) { System.err.println("Passwords do not match."); return 127; // "command not found" } for (int i = 0; i < verify.length; i++) { if (verify[i] != password[i]) { System.err.println("Passwords do not match."); return 127; // "command not found" } verify[i] = 0; } } catch (Throwable t) { log.error("Unexpected error while verifying password: " + t.getMessage(), t); } } // create new account if (base == null) { // default to trsst hub base = "https://home.trsst.com/feed"; } // generate vanity id if required if (vanity != null) { System.err.println("Searching for vanity feed id prefix: " + vanity); switch (vanity.length()) { case 0: case 1: break; case 2: System.err.println("This may take several minutes."); break; case 3: System.err.println("This may take several hours."); break; case 4: System.err.println("This may take several days."); break; case 5: System.err.println("This may take several months."); break; default: System.err.println("This may take several years."); break; } System.err.println("Started: " + new Date()); System.err.println("^C to exit"); } do { signingKeys = Common.generateSigningKeyPair(); id = Common.toFeedId(signingKeys.getPublic()); } while (vanity != null && !id.startsWith(vanity)); if (vanity != null) { System.err.println("Finished: " + new Date()); } encryptionKeys = Common.generateEncryptionKeyPair(); System.err.println("New feed id created: " + id); File keyFile; if (keyPath != null) { keyFile = new File(keyPath, id + Common.KEY_EXTENSION); } else { keyFile = new File(Common.getClientRoot(), id + Common.KEY_EXTENSION); } // persist to keystore writeSigningKeyPair(signingKeys, id, keyFile, password); writeEncryptionKeyPair(encryptionKeys, id, keyFile, password); } else { File keyFile; if (keyPath != null) { keyFile = new File(Common.getClientRoot(), keyPath); } else { keyFile = new File(Common.getClientRoot(), id + Common.KEY_EXTENSION); } if (keyFile.exists()) { System.err.println("Using existing account id: " + id); } else { System.err.println("Cannot locate keys for account id: " + id); return 78; // "configuration error" } signingKeys = readSigningKeyPair(id, keyFile, password); if (signingKeys != null) { encryptionKeys = readEncryptionKeyPair(id, keyFile, password); if (encryptionKeys == null) { encryptionKeys = signingKeys; } } } // clear password chars for (int i = 0; i < password.length; i++) { password[i] = 0; } if (signingKeys == null) { System.err.println("Could not obtain keys for signing."); return 73; // "can't create output error" } String[] recipientIds = null; if (recipients != null) { LinkedList<String> keys = new LinkedList<String>(); for (int i = 0; i < recipients.length; i++) { if ("-".equals(recipients[i])) { // "-" is shorthand for encrypt for mentioned ids if (mentions != null) { for (String mention : mentions) { if (Common.isFeedId(mention)) { keys.add(mention); } } } } else if (Common.isFeedId(recipients[i])) { keys.add(recipients[i]); } else { log.warn("Could not parse recipient id: " + recipients[i]); } } recipientIds = keys.toArray(new String[0]); } // handle binary attachment String mimetype = null; byte[] attachment = null; if (attach != null) { InputStream input = null; try { if ("-".equals(attach)) { input = new BufferedInputStream(in); } else { File file = new File(attach); input = new BufferedInputStream(new FileInputStream(file)); System.err.println("Attaching: " + file.getCanonicalPath()); } attachment = Common.readFully(input); mimetype = new Tika().detect(attachment); System.err.println("Detected type: " + mimetype); } catch (Throwable t) { log.error("Could not read attachment: " + attach, t); return 73; // "can't create output error" } finally { try { input.close(); } catch (IOException ioe) { // suppress any futher error on closing } } } Object result; try { EntryOptions options = new EntryOptions(); options.setStatus(subject); options.setVerb(verb); if (mentions != null) { options.setMentions(mentions); } if (tags != null) { options.setTags(tags); } options.setBody(body); if (attachment != null) { options.addContentData(attachment, mimetype); } else if (url != null) { options.setContentUrl(url); } FeedOptions feedOptions = new FeedOptions(); feedOptions.setAuthorEmail(email); feedOptions.setAuthorName(name); feedOptions.setAuthorUri(uri); feedOptions.setTitle(title); feedOptions.setSubtitle(subtitle); feedOptions.setBase(base); if (icon != null) { if ("-".equals(icon)) { feedOptions.setAsIcon(true); } else { feedOptions.setIconURL(icon); } } if (logo != null) { if ("-".equals(logo)) { feedOptions.setAsLogo(true); } else { feedOptions.setLogoURL(logo); } } if (recipientIds != null) { EntryOptions publicEntry = new EntryOptions().setStatus("Encrypted content").setVerb("encrypt"); // TODO: add duplicate mentions to outside of envelope options.encryptFor(recipientIds, publicEntry); } result = client.post(signingKeys, encryptionKeys, options, feedOptions); } catch (IllegalArgumentException e) { log.error("Invalid request: " + id + " : " + e.getMessage(), e); return 76; // "remote error" } catch (IOException e) { log.error("Error connecting to service for id: " + id, e); return 76; // "remote error" } catch (org.apache.abdera.security.SecurityException e) { log.error("Error generating signatures for id: " + id, e); return 73; // "can't create output error" } catch (Exception e) { log.error("General security error for id: " + id, e); return 74; // "general io error" } if (result != null) { if (format) { out.println(Common.formatXML(result.toString())); } else { out.println(result.toString()); } } return 0; // "OK" }
From source file:com.greenpepper.maven.runner.CommandLineRunner.java
@SuppressWarnings("unchecked") private List<String> parseCommandLine(String[] args) throws ArgumentMissingException, IOException, ParseException { List<String> parameters = new ArrayList<String>(); CommandLine commandLine = argumentsParser.parse(args); if (commandLine != null) { Option[] options = commandLine.getOptions(); for (Option option : options) { if ("v".equals(option.getOpt())) { isDebug = true;/*from ww w. j ava2 s .c om*/ parameters.add("--debug"); } else if ("p".equals(option.getOpt())) { projectDependencyDescriptor = option.getValue(); } else if ("m".equals(option.getOpt())) { usingScopes(option.getValue()); } else if ("o".equals(option.getOpt())) { parameters.add("-" + option.getOpt()); parameters.add(option.getValue()); } else if ("r".equals(option.getOpt())) { parameters.add("-" + option.getOpt()); parameters.add(option.getValue()); } else { parameters.add("--" + option.getLongOpt()); if (option.hasArg()) { parameters.add(option.getValue()); } } } parameters.addAll(commandLine.getArgList()); } return parameters; }