Example usage for org.apache.commons.io FileUtils copyDirectory

List of usage examples for org.apache.commons.io FileUtils copyDirectory

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  6. copyDirectory

Introduction

In this page you can find the example usage for org.apache.commons.io FileUtils copyDirectory.

Prototype

public static void copyDirectory(File srcDir, File destDir) throws IOException

Source Link

Document

Copies a whole directory to a new location preserving the file dates.

Usage

From source file:au.org.ala.delta.confor.ToKeyTest.java

@Test
public void testSampleToKey() throws Exception {

    File tointDirectory = urlToFile("/dataset/");
    File dest = new File(System.getProperty("java.io.tmpdir"));
    FileUtils.copyDirectory(tointDirectory, dest);

    String tokeyFilePath = FilenameUtils.concat(dest.getAbsolutePath(), "sample/tokey");

    CONFOR.main(new String[] { tokeyFilePath });

    String expectedKCharsFilename = FilenameUtils.concat(dest.getAbsolutePath(),
            "sample/expected_results/kchars");
    String expectedKItemsFilename = FilenameUtils.concat(dest.getAbsolutePath(),
            "sample/expected_results/kitems");

    BinaryKeyFile expectedKChars = new BinaryKeyFile(expectedKCharsFilename, BinFileMode.FM_READONLY);
    BinaryKeyFile expectedKItems = new BinaryKeyFile(expectedKItemsFilename, BinFileMode.FM_READONLY);

    String actualKCharsFilename = FilenameUtils.concat(dest.getAbsolutePath(), "sample/kchars");
    String actualKItemsFilename = FilenameUtils.concat(dest.getAbsolutePath(), "sample/kitems");

    BinaryKeyFile kchars = new BinaryKeyFile(actualKCharsFilename, BinFileMode.FM_READONLY);
    BinaryKeyFile kitems = new BinaryKeyFile(actualKItemsFilename, BinFileMode.FM_READONLY);

    int numRecords = expectedKChars.getLength() / BinaryKeyFile.RECORD_LENGTH_BYTES;
    int actualNumRecords = kchars.getLength() / BinaryKeyFile.RECORD_LENGTH_BYTES;

    int count = Math.min(numRecords, actualNumRecords);

    for (int i = 1; i <= count; i++) {
        List<Integer> expectedRecord = expectedKChars.readIntegerList(i, BinaryKeyFile.RECORD_LENGTH_INTEGERS);
        List<Integer> actualRecord = kchars.readIntegerList(i, BinaryKeyFile.RECORD_LENGTH_INTEGERS);

        System.out.println("Record: " + i);
        System.out.println(expectedRecord);
        System.out.println(actualRecord);

        System.out.println("Expected as string: ");
        System.out.println(expectedKChars.readString(i, BinaryKeyFile.RECORD_LENGTH_BYTES));

        System.out.println();/*from w  w w . j av  a2 s.com*/
        assertEquals(expectedRecord, actualRecord);

    }

    numRecords = expectedKItems.getLength() / BinaryKeyFile.RECORD_LENGTH_BYTES;
    System.out.println("**** Items File (" + numRecords + ")*****");

    List<Integer> header = expectedKItems.readIntegerList(1, BinaryKeyFile.RECORD_LENGTH_INTEGERS);
    ItemsFileHeader itemsHeader = new ItemsFileHeader();
    itemsHeader.fromInts(header);

    for (int i = 1; i < numRecords; i++) {

        System.out.println("Record: " + i);

        if ((i >= itemsHeader.getCharcterReliabilitiesRecord() && i < itemsHeader.getTaxonMaskRecord())
                || i >= itemsHeader.getItemAbundancesRecord()) {
            List<Float> expectedFloats = expectedKItems.readFloatList(i, BinaryKeyFile.RECORD_LENGTH_INTEGERS);
            List<Float> actualFloats = kitems.readFloatList(i, BinaryKeyFile.RECORD_LENGTH_INTEGERS);
            System.out.println(expectedFloats);
            System.out.println(actualFloats);

            for (int f = 0; f < expectedFloats.size(); f++) {
                // Note sure if this is a difference in encoding or precision
                // but our floats are quite different.
                assertEquals(expectedFloats.get(f), actualFloats.get(f), 0.021f);
            }
        } else if (i >= itemsHeader.getHeadingRecord() && i < itemsHeader.getCharacterMaskRecord()) {
            // The header has the date in it so will be different.
        } else {
            List<Integer> expectedRecord = expectedKItems.readIntegerList(i,
                    BinaryKeyFile.RECORD_LENGTH_INTEGERS);
            List<Integer> actualRecord = kitems.readIntegerList(i, BinaryKeyFile.RECORD_LENGTH_INTEGERS);
            System.out.println(expectedRecord);
            System.out.println(actualRecord);

            System.out.println("Expected as string: ");
            char[] chars = expectedKItems.readString(i, BinaryKeyFile.RECORD_LENGTH_BYTES).toCharArray();
            for (int c = 0; c < chars.length; c++) {
                System.out.print(chars[c]);
            }
            if (i != 1) {
                assertEquals(expectedRecord, actualRecord);
            }
        }
        System.out.println();

        char[] actualChars = kitems.readString(i, BinaryKeyFile.RECORD_LENGTH_BYTES).toCharArray();
        for (int c = 0; c < actualChars.length; c++) {
            System.out.print(actualChars[c]);
        }
        System.out.println();

        System.out.println();
    }

}

From source file:ml.shifu.shifu.udf.EvalScoreUDFTest.java

@BeforeClass
public void setUp() throws Exception {
    Environment.setProperty(Environment.SHIFU_HOME, ".");
    File models = new File("src/test/resources/example/cancer-judgement/ModelStore/ModelSet1/models");

    FileUtils.copyDirectory(models, tmpModels);

    instance = new EvalScoreUDF("LOCAL",
            "src/test/resources/example/cancer-judgement/ModelStore/ModelSet1/ModelConfig.json",
            "src/test/resources/example/cancer-judgement/ModelStore/ModelSet1/ColumnConfig.json", "EvalA");
}

From source file:de.brendamour.jpasskit.signing.PKPassTemplateFolder.java

@Override
public void provisionPassAtDirectory(File tempPassDir) throws IOException {
    FileUtils.copyDirectory(new File(pathToTemplateDirectory), tempPassDir);
}

From source file:com.mycompany.sparkrentals.client.RentalSolrClientTest.java

@Before
public void setUp() throws IOException, SolrServerException {
    File resourceDir = new File("src/test/resources/solr");
    //use a temporary folder for solr home
    FileUtils.copyDirectory(resourceDir, tempSolrHome.getRoot());
    CoreContainer coreContainer = new CoreContainer(tempSolrHome.getRoot().getAbsolutePath());
    coreContainer.load();//from w  w  w .  j av a2s .  c  om
    server = new EmbeddedSolrServer(coreContainer, "new_core");

    //populate initial data
    List<Rental> rentals = new ArrayList<>();
    rentals.add(new Rental("A1234", "city1", "province2", "country2", "fjkso", "Villa", true, true, true, true,
            10f, "$", 1, new Date()));
    rentals.add(new Rental("A2234", "city2", "province2", "country9", "dfsdd", "studio", true, false, true,
            true, 11f, "$", 2, new Date()));
    rentals.add(new Rental("A3234", "city3", "province5", "country1", "e9r3e", "studio", false, true, false,
            true, 7.2f, "$", 3, new Date()));
    Date threeDaysAgo = new Date(new Date().getTime() - 3 * 24 * 3600 * 1000);
    rentals.add(new Rental("A4234", "city4", "province7", "country6", "ghree", "Single Floor", true, false,
            true, true, 8f, "$", 2, threeDaysAgo));

    for (Rental rental : rentals) {
        server.addBean(rental);
        server.commit();
    }

    client = new RentalSolrClient();
    client.setSolrClient(server);
}

From source file:ml.shifu.shifu.util.ModelSpecLoaderUtilsTest.java

@Test
public void testFindModels() throws IOException {
    ModelConfig modelConfig = CommonUtils.loadModelConfig(
            "src/test/resources/example/cancer-judgement/ModelStore/ModelSet1/ModelConfig.json",
            SourceType.LOCAL);/*from   w w  w.j a va2s  .c o m*/

    File srcModels = new File("src/test/resources/example/cancer-judgement/ModelStore/ModelSet1/models");
    File dstModels = new File("models");
    FileUtils.copyDirectory(srcModels, dstModels);

    List<FileStatus> modelFiles = ModelSpecLoaderUtils.findModels(modelConfig, null, SourceType.LOCAL);
    Assert.assertEquals(5, modelFiles.size());

    EvalConfig evalConfig = modelConfig.getEvalConfigByName("EvalA");
    evalConfig.setCustomPaths(new HashMap<String, String>());
    evalConfig.getCustomPaths().put(Constants.KEY_MODELS_PATH, null);
    modelFiles = ModelSpecLoaderUtils.findModels(modelConfig, evalConfig, SourceType.LOCAL);
    Assert.assertEquals(5, modelFiles.size());

    evalConfig.getCustomPaths().put(Constants.KEY_MODELS_PATH, "  ");
    modelFiles = ModelSpecLoaderUtils.findModels(modelConfig, evalConfig, SourceType.LOCAL);
    Assert.assertEquals(5, modelFiles.size());

    FileUtils.deleteDirectory(dstModels);

    evalConfig.getCustomPaths().put(Constants.KEY_MODELS_PATH,
            "./src/test/resources/example/cancer-judgement/ModelStore/ModelSet1/models");
    modelFiles = ModelSpecLoaderUtils.findModels(modelConfig, evalConfig, SourceType.LOCAL);
    Assert.assertEquals(5, modelFiles.size());

    evalConfig.getCustomPaths().put(Constants.KEY_MODELS_PATH,
            "./src/test/resources/example/cancer-judgement/ModelStore/ModelSet1/models/model0.nn");
    modelFiles = ModelSpecLoaderUtils.findModels(modelConfig, evalConfig, SourceType.LOCAL);
    Assert.assertEquals(1, modelFiles.size());

    evalConfig.getCustomPaths().put(Constants.KEY_MODELS_PATH, "not-exists");
    modelFiles = ModelSpecLoaderUtils.findModels(modelConfig, evalConfig, SourceType.LOCAL);
    Assert.assertEquals(0, modelFiles.size());

    evalConfig.getCustomPaths().put(Constants.KEY_MODELS_PATH,
            "./src/test/resources/example/cancer-judgement/ModelStore/ModelSet1/models/*.nn");
    modelFiles = ModelSpecLoaderUtils.findModels(modelConfig, evalConfig, SourceType.LOCAL);
    Assert.assertEquals(5, modelFiles.size());

    evalConfig.getCustomPaths().put(Constants.KEY_MODELS_PATH,
            "./src/test/resources/example/cancer-judgement/ModelStore/ModelSet{0,1,9}/*/*.nn");
    modelFiles = ModelSpecLoaderUtils.findModels(modelConfig, evalConfig, SourceType.LOCAL);
    Assert.assertEquals(5, modelFiles.size());
}

From source file:com.dragovorn.dragonbot.api.bot.file.FileManager.java

public static void reloadFiles() {
    FileManager.config = new File(directory, "config.yml");
    FileManager.logs = new File(directory, "logs");
    FileManager.plugins = new File(directory, "plugins");
    FileManager.updater = new File(directory, "updater.jar");

    List<File> toCopy = new ArrayList<>();

    toCopy.addAll(pluginAddedFiles);/*from www. jav  a  2 s  .  co m*/

    pluginAddedFiles.clear();

    toCopy.forEach(file -> {
        try {
            if (file.isDirectory()) {
                FileUtils.copyDirectory(file, new File(directory, file.getName()));
            } else {
                FileUtils.copyFile(file, new File(directory, file.getName()));
            }

            file.delete();

            pluginAddedFiles.add(new File(directory, file.getName()));
        } catch (IOException exception) {
            exception.printStackTrace();
        }
    });
}

From source file:com.smartbear.soapui.utils.jetty.JettyTestCaseBase.java

protected JettyTestCaseBase() {
    port = PORT.getAndIncrement();/*from  w  w  w . ja  v  a2s.  c om*/
    resourceBase = Files.createTempDir().getAbsolutePath();
    try {
        FileUtils.copyDirectory(
                new File(JettyTestCaseBase.class.getResource("/config").toURI()).getParentFile(),
                new File(resourceBase));
    } catch (IOException e) {
        throw new IllegalStateException(e);
    } catch (URISyntaxException e) {
        throw new RuntimeException("Unexpected URI syntax exception! - this shouldn't happen", e);
    }
    ResourceHandler resource_handler = new ResourceHandler();
    resource_handler.setResourceBase(resourceBase);
    this.server = new Server(port);

    HandlerList handlers = new HandlerList();
    handlers.setHandlers(new Handler[] { resource_handler, new DefaultHandler() });
    this.server.setHandler(handlers);
}

From source file:com.google.cloud.tools.gradle.appengine.AppEngineFlexiblePluginIntegrationTest.java

@Before
public void setUp() throws IOException {
    FileUtils.copyDirectory(new File("src/integTest/resources/projects/flexible-project"),
            testProjectDir.getRoot());/*w  ww.j a  v  a  2 s . c  o m*/
}

From source file:com.kylinolap.job.hadoop.cube.NDCuboidMapperTest.java

@Before
public void setUp() throws Exception {
    createTestMetadata();/* ww w  . ja v a2 s  .c  om*/

    // hack for distributed cache
    FileUtils.deleteDirectory(new File("../job/meta"));
    FileUtils.copyDirectory(new File(this.getTestConfig().getMetadataUrl()), new File("../job/meta"));

    NDCuboidMapper mapper = new NDCuboidMapper();
    CuboidReducer reducer = new CuboidReducer();
    mapReduceDriver = MapReduceDriver.newMapReduceDriver(mapper, reducer);
}

From source file:com.google.cloud.tools.gradle.endpoints.framework.ProjectTests.java

@Test
public void testClientBuilds() throws IOException, URISyntaxException {
    FileUtils.copyDirectory(new File(getClass().getClassLoader().getResource("projects/client").toURI()),
            testProjectDir.getRoot());/*ww w  .  j  a  va2  s . com*/
    BuildResult buildResult = GradleRunner.create().withProjectDir(testProjectDir.getRoot())
            .withPluginClasspath().withArguments("assemble").build();
}