Example usage for org.jfree.data.statistics DefaultBoxAndWhiskerCategoryDataset DefaultBoxAndWhiskerCategoryDataset

Introduction

In this page you can find the example usage for org.jfree.data.statistics DefaultBoxAndWhiskerCategoryDataset DefaultBoxAndWhiskerCategoryDataset.

Prototype

public DefaultBoxAndWhiskerCategoryDataset() 

Source Link

Document

Creates a new dataset.

Usage

From source file:guineu.modules.visualization.intensityboxplot.IntensityBoxPlotFrame.java

private BoxAndWhiskerCategoryDataset createSampleDataset() {

    final DefaultBoxAndWhiskerCategoryDataset dataset = new DefaultBoxAndWhiskerCategoryDataset();

    final List list = new ArrayList();
    if (!xAxisValueSource.equals("Sample")) {
        Dataset data = GuineuCore.getDesktop().getSelectedDataFiles()[0];
        List<String> parameterValues = data.getParameterAvailableValues((String) xAxisValueSource);
        for (int i = 0; i < parameterValues.size(); i++) {
            for (String sampleName : this.selectedFiles) {
                if (parameterValues.get(i)
                        .equals(data.getParametersValue(sampleName, (String) xAxisValueSource))) {
                    for (int k = 0; k < this.selectedRows.length; k++) {
                        Double value = (Double) this.selectedRows[k].getPeak(sampleName);
                        list.add(value);

                    }/*from   w w  w. ja v  a2 s .co m*/
                }
            }

            dataset.add(BoxAndWhiskerCalculator.calculateBoxAndWhiskerStatistics(list), "Series ",
                    parameterValues.get(i));
        }
    } else {
        for (int i = 0; i < this.selectedFiles.length; i++) {
            for (int k = 0; k < this.selectedRows.length; k++) {
                Double value = (Double) this.selectedRows[k].getPeak(this.selectedFiles[i]);
                list.add(value);
            }
            dataset.add(BoxAndWhiskerCalculator.calculateBoxAndWhiskerStatistics(list), "Series ",
                    this.selectedFiles[i]);
        }
    }

    return dataset;
}

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From source file:edu.ucla.stat.SOCR.chart.demo.DotChart.java

protected BoxAndWhiskerCategoryDataset createDataset2(boolean isDemo) {
    if (isDemo) {
        SERIES_COUNT = 1;/*from w  w w  .j  a  v a 2  s .c  om*/
        CATEGORY_COUNT = 1;
        VALUE_COUNT = 20;
        values_storage = new String[SERIES_COUNT][CATEGORY_COUNT];

        DefaultBoxAndWhiskerCategoryDataset result = new DefaultBoxAndWhiskerCategoryDataset();
        List values = createValueList("3, -2, 4, 4, 5, 6, 6, 7, 1, 1, 1, 2,3, 4, 3, 4, 3, 10, 7, 6");

        result.add(values, "", "");

        values_storage[0][0] = "3, -2, 4, 4, 5, 6, 6, 7, 1, 1, 1, 2,3, 4, 3, 4, 3, 10, 7, 6";

        return result;
    } else
        return super.createDataset2(false);
}

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From source file:org.jfree.data.statistics.DefaultBoxAndWhiskerCategoryDatasetTest.java

/**
 * Some checks for the add() method./*from  w ww  .  j  a  va  2s .co m*/
 */
@Test
public void testAdd() {
    DefaultBoxAndWhiskerCategoryDataset dataset = new DefaultBoxAndWhiskerCategoryDataset();
    BoxAndWhiskerItem item1 = new BoxAndWhiskerItem(1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, new ArrayList());
    dataset.add(item1, "R1", "C1");

    assertEquals(2.0, dataset.getValue("R1", "C1").doubleValue(), EPSILON);
    assertEquals(1.0, dataset.getMeanValue("R1", "C1").doubleValue(), EPSILON);
    assertEquals(2.0, dataset.getMedianValue("R1", "C1").doubleValue(), EPSILON);
    assertEquals(3.0, dataset.getQ1Value("R1", "C1").doubleValue(), EPSILON);
    assertEquals(4.0, dataset.getQ3Value("R1", "C1").doubleValue(), EPSILON);
    assertEquals(5.0, dataset.getMinRegularValue("R1", "C1").doubleValue(), EPSILON);
    assertEquals(6.0, dataset.getMaxRegularValue("R1", "C1").doubleValue(), EPSILON);
    assertEquals(7.0, dataset.getMinOutlier("R1", "C1").doubleValue(), EPSILON);
    assertEquals(8.0, dataset.getMaxOutlier("R1", "C1").doubleValue(), EPSILON);
    assertEquals(new Range(7.0, 8.0), dataset.getRangeBounds(false));
}

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From source file:org.gephi.ui.utils.ChartsUtils.java

/**
 * Build a new box-plot from an array of numbers using a default title and yLabel.
 * String dataName will be used for xLabel.
 * @param numbers Numbers for building box-plot
 * @param dataName Name of the numbers data
 * @return Prepared box-plot/*from w w w  .  ja va2 s .co  m*/
 */
public static JFreeChart buildBoxPlot(final Number[] numbers, final String dataName) {
    if (numbers == null || numbers.length == 0) {
        return null;
    }
    DefaultBoxAndWhiskerCategoryDataset dataset = new DefaultBoxAndWhiskerCategoryDataset();
    final ArrayList<Number> list = new ArrayList<Number>();
    list.addAll(Arrays.asList(numbers));

    final String valuesString = getMessage("ChartsUtils.report.box-plot.values");
    dataset.add(list, valuesString, "");

    final BoxAndWhiskerRenderer renderer = new BoxAndWhiskerRenderer();
    renderer.setMeanVisible(false);
    renderer.setFillBox(false);
    renderer.setMaximumBarWidth(0.5);

    final CategoryAxis xAxis = new CategoryAxis(dataName);
    final NumberAxis yAxis = new NumberAxis(getMessage("ChartsUtils.report.box-plot.values-range"));
    yAxis.setAutoRangeIncludesZero(false);
    renderer.setBaseToolTipGenerator(new BoxAndWhiskerToolTipGenerator());
    final CategoryPlot plot = new CategoryPlot(dataset, xAxis, yAxis, renderer);
    plot.setRenderer(renderer);

    JFreeChart boxPlot = new JFreeChart(getMessage("ChartsUtils.report.box-plot.title"), plot);
    return boxPlot;
}

---

From source file:no.uio.medicine.virsurveillance.charts.BoxAndWhiskerChart_AWT.java

private CategoryDataset createDataset(ArrayList<ArrayList<ArrayList<Float>>> dataPoints,
        ArrayList<ArrayList<String>> categories, ArrayList<String> titles) {
    final int nSeries = 3; //<--n caixes a cada titol equivalent a size de datapoints
    final int nCaixes = 4; //<--titols per caixa. titles. en principi ha de ser igual a dataPoints(x).size
    final int puntsPerCaixa = 22; //<-- dataPoints(i)(j).size()

    final DefaultBoxAndWhiskerCategoryDataset dataset = new DefaultBoxAndWhiskerCategoryDataset();

    int i = 0;/*from  w ww  .j  av  a  2 s . c  o  m*/
    for (ArrayList<ArrayList<Float>> boxSet : dataPoints) {
        int j = 0;

        for (ArrayList<Float> box : boxSet) {
            dataset.add(box, titles.get(i), categories.get(i).get(j));
            j++;
        }

        i++;
    }

    return dataset;
}

---

From source file:edu.ucla.stat.SOCR.chart.SuperBoxAndWhiskerChart.java

/**
 * /*from w ww .ja v  a  2  s.  c  o  m*/
 * @param isDemo data come from demo(true) or dataTable(false)
 * @return
 */
protected BoxAndWhiskerCategoryDataset createDataset(boolean isDemo) {

    if (isDemo) {
        SERIES_COUNT = 3;
        CATEGORY_COUNT = 5;
        VALUE_COUNT = 20;

        values_storage = new String[SERIES_COUNT][CATEGORY_COUNT];

        DefaultBoxAndWhiskerCategoryDataset result = new DefaultBoxAndWhiskerCategoryDataset();
        for (int s = 0; s < SERIES_COUNT; s++) {
            for (int c = 0; c < CATEGORY_COUNT; c++) {
                List values = createValueList(0, 20.0, VALUE_COUNT);
                values_storage[s][c] = vs;
                result.add(values, "Series " + s, "Category " + c);
            }
        }
        return result;
    }

    else {
        trimColumn = true;
        setArrayFromTable();

        String[][] x = new String[xyLength][independentVarLength];
        String[][] y = new String[xyLength][dependentVarLength];

        for (int index = 0; index < independentVarLength; index++)
            for (int i = 0; i < xyLength; i++)
                x[i][index] = indepValues[i][index];

        SERIES_COUNT = 0;
        for (int index = 0; index < dependentVarLength; index++)
            for (int i = 0; i < xyLength; i++) {
                if (depValues[i][index] != null) {
                    y[i][index] = depValues[i][index];
                    SERIES_COUNT++;
                }
            }

        // create the dataset... 
        DefaultBoxAndWhiskerCategoryDataset dataset = new DefaultBoxAndWhiskerCategoryDataset();

        CATEGORY_COUNT = independentVarLength;

        values_storage = new String[SERIES_COUNT][CATEGORY_COUNT];

        for (int s = 0; s < SERIES_COUNT; s++)
            for (int c = 0; c < CATEGORY_COUNT; c++) {
                if (x[s][c] == null || x[s][c].length() == 0) {
                    x[s][c] = "0.0, 0.0";
                }
                if (y[s][0] != null) {
                    dataset.add(createValueList(x[s][c]), y[s][0], independentHeaders[c]);
                    values_storage[s][c] = x[s][c];
                }

            }

        return dataset;
    }
}

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From source file:unalcol.termites.boxplots.ECALMessages.java

/**
 * Creates a sample dataset./*  w w w  .ja va2s  .co m*/
 *
 * @return A sample dataset.
 */
private BoxAndWhiskerCategoryDataset createSampleDataset(ArrayList<Double> Pf, BoxAndWhiskerRenderer renderer) {

    final int seriesCount = 5;
    final int categoryCount = 4;
    final int entityCount = 22;
    String sDirectorio = ".\\experiments\\ECAL CR";
    File f = new File(sDirectorio);
    String extension;
    File[] files = f.listFiles();
    Hashtable<String, String> Pop = new Hashtable<>();
    PrintWriter escribir;
    Scanner sc = null;
    ArrayList<Integer> aPops = new ArrayList<>();
    ArrayList<Double> aPf = new ArrayList<>();
    ArrayList<String> aTech = new ArrayList<>();

    final DefaultBoxAndWhiskerCategoryDataset dataset = new DefaultBoxAndWhiskerCategoryDataset();

    for (File file : files) {
        extension = "";
        int i = file.getName().lastIndexOf('.');
        int p = Math.max(file.getName().lastIndexOf('/'), file.getName().lastIndexOf('\\'));
        if (i > p) {
            extension = file.getName().substring(i + 1);
        }

        // System.out.println(file.getName() + "extension" + extension);
        if (file.isFile() && extension.equals("csv") && file.getName().startsWith("experiment")) {
            System.out.println(file.getName());
            System.out.println("get: " + file.getName());
            String[] filenamep = file.getName().split(Pattern.quote("+"));

            System.out.println("file" + filenamep[8]);

            int popsize = Integer.valueOf(filenamep[2]);
            double pf = Double.valueOf(filenamep[4]);
            String mode = filenamep[6];

            int maxIter = -1;
            //if (!filenamep[8].isEmpty()) {
            maxIter = Integer.valueOf(filenamep[8]);
            //}

            System.out.println("psize:" + popsize);
            System.out.println("pf:" + pf);
            System.out.println("mode:" + mode);
            System.out.println("maxIter:" + maxIter);

            String[] aMode = { "random", "levywalk", "sandc" };
            //String[] aMode = {"lwphclwevap", "lwsandc2", "lwsandc", "lwphevap2", "lwphevap"};

            if (/*Pf == pf && */isInMode(aMode, mode)) {
                final List list = new ArrayList();
                try {
                    sc = new Scanner(file);

                } catch (FileNotFoundException ex) {
                    Logger.getLogger(DataCollectedLatexConsolidatorSASOMessagesSend1.class.getName())
                            .log(Level.SEVERE, null, ex);
                }
                int agentsCorrect = 0;
                int worldSize = 0;
                double averageExplored = 0.0;
                int bestRoundNumber = 0;
                double avgSend = 0;
                double avgRecv = 0;
                double avgdataExplInd = 0;
                ArrayList<Double> acSt = new ArrayList<>();
                ArrayList<Double> avgExp = new ArrayList<>();
                ArrayList<Double> bestR = new ArrayList<>();
                ArrayList<Double> avSnd = new ArrayList<>();
                ArrayList<Double> avRecv = new ArrayList<>();
                ArrayList<Double> avIndExpl = new ArrayList<>();

                String[] data = null;
                while (sc.hasNext()) {
                    String line = sc.nextLine();
                    //System.out.println("line:" + line);
                    data = line.split(",");
                    agentsCorrect = Integer.valueOf(data[0]);
                    //agentsIncorrect = Integer.valueOf(data[1]); // not used
                    worldSize = Integer.valueOf(data[3]);
                    averageExplored = Double.valueOf(data[4]);
                    // data[3] stdavgExplored - not used
                    bestRoundNumber = Integer.valueOf(data[6]);
                    avgSend = Double.valueOf(data[7]);
                    avgRecv = Double.valueOf(data[8]);
                    avgdataExplInd = Double.valueOf(data[11]);

                    //Add Data and generate statistics 
                    acSt.add((double) agentsCorrect);
                    avgExp.add(averageExplored);

                    avSnd.add(avgSend);
                    avRecv.add(avgRecv);
                    avIndExpl.add(avgdataExplInd);

                    list.add(new Double(avgSend));

                }
                LOGGER.debug("Adding series " + i);
                LOGGER.debug(list.toString());

                if (Pf.contains(pf)) {
                    /*pf == 1.0E-4 || pf == 3.0E-4*/
                    if (Pf.size() == 1) {
                        dataset.add(list, popsize, getTechniqueName(mode));
                    } else {
                        dataset.add(list, String.valueOf(popsize) + "-" + pf + "\n", getTechniqueName(mode));
                    }
                }
            }
        }

    }

    /*for (int i = 0; i < seriesCount; i++) {
     for (int j = 0; j < categoryCount; j++) {
     final List list = new ArrayList();
     // add some values...
     for (int k = 0; k < entityCount; k++) {
     final double value1 = 10.0 + Math.random() * 3;
     list.add(new Double(value1));
     final double value2 = 11.25 + Math.random(); // concentrate values in the middle
     list.add(new Double(value2));
     }
     LOGGER.debug("Adding series " + i);
     LOGGER.debug(list.toString());
     dataset.add(list, "Series " + i, " Type " + j);
     }
            
     }*/
    return dataset;
}

---

From source file:unalcol.termites.boxplots.MessagesSent2.java

/**
 * Creates a sample dataset.//from www  . ja  v a 2s  . c om
 *
 * @return A sample dataset.
 */
private BoxAndWhiskerCategoryDataset createSampleDataset(ArrayList<Double> Pf, BoxAndWhiskerRenderer renderer) {

    final int seriesCount = 5;
    final int categoryCount = 4;
    final int entityCount = 22;
    String sDirectorio = ".\\experiments\\2015-10-14-Maze\\results";
    File f = new File(sDirectorio);
    String extension;
    File[] files = f.listFiles();
    Hashtable<String, String> Pop = new Hashtable<>();
    PrintWriter escribir;
    Scanner sc = null;
    ArrayList<Integer> aPops = new ArrayList<>();
    ArrayList<Double> aPf = new ArrayList<>();
    ArrayList<String> aTech = new ArrayList<>();

    final DefaultBoxAndWhiskerCategoryDataset dataset = new DefaultBoxAndWhiskerCategoryDataset();

    for (File file : files) {
        extension = "";
        int i = file.getName().lastIndexOf('.');
        int p = Math.max(file.getName().lastIndexOf('/'), file.getName().lastIndexOf('\\'));
        if (i > p) {
            extension = file.getName().substring(i + 1);
        }

        // System.out.println(file.getName() + "extension" + extension);
        if (file.isFile() && extension.equals("csv") && file.getName().startsWith("experiment")) {
            System.out.println(file.getName());
            System.out.println("get: " + file.getName());
            String[] filenamep = file.getName().split(Pattern.quote("+"));

            System.out.println("file" + filenamep[8]);

            int popsize = Integer.valueOf(filenamep[2]);
            double pf = Double.valueOf(filenamep[4]);
            String mode = filenamep[6];

            int maxIter = -1;
            //if (!filenamep[8].isEmpty()) {
            maxIter = Integer.valueOf(filenamep[8]);
            //}

            System.out.println("psize:" + popsize);
            System.out.println("pf:" + pf);
            System.out.println("mode:" + mode);
            System.out.println("maxIter:" + maxIter);

            String[] aMode = { "levywalk", "lwphevap", "hybrid" };
            //String[] aMode = {"sandclw", "lwsandc2", "lwsandc", "lwphevap2", "lwphevap"};
            //String[] aMode = {"lwphclwevap", "lwsandc2", "lwsandc", "lwphevap2", "lwphevap"};

            if (/*Pf == pf && */isInMode(aMode, mode)) {
                final List list = new ArrayList();
                try {
                    sc = new Scanner(file);

                } catch (FileNotFoundException ex) {
                    Logger.getLogger(DataCollectedLatexConsolidatorSASOMessagesSend1.class.getName())
                            .log(Level.SEVERE, null, ex);
                }
                int agentsCorrect = 0;
                int worldSize = 0;
                double averageExplored = 0.0;
                int bestRoundNumber = 0;
                double avgSend = 0;
                double avgRecv = 0;
                double avgdataExplInd = 0;
                ArrayList<Double> acSt = new ArrayList<>();
                ArrayList<Double> avgExp = new ArrayList<>();
                ArrayList<Double> bestR = new ArrayList<>();
                ArrayList<Double> avSnd = new ArrayList<>();
                ArrayList<Double> avRecv = new ArrayList<>();
                ArrayList<Double> avIndExpl = new ArrayList<>();

                String[] data = null;
                while (sc.hasNext()) {
                    String line = sc.nextLine();
                    //System.out.println("line:" + line);
                    data = line.split(",");
                    agentsCorrect = Integer.valueOf(data[0]);
                    //agentsIncorrect = Integer.valueOf(data[1]); // not used
                    worldSize = Integer.valueOf(data[3]);
                    averageExplored = Double.valueOf(data[4]);
                    // data[3] stdavgExplored - not used
                    bestRoundNumber = Integer.valueOf(data[6]);
                    avgSend = Double.valueOf(data[7]);
                    avgRecv = Double.valueOf(data[8]);
                    avgdataExplInd = Double.valueOf(data[11]);

                    //Add Data and generate statistics 
                    acSt.add((double) agentsCorrect);
                    avgExp.add(averageExplored);

                    avSnd.add(avgSend);
                    avRecv.add(avgRecv);
                    avIndExpl.add(avgdataExplInd);

                    list.add(new Double(avgSend));

                }
                LOGGER.debug("Adding series " + i);
                LOGGER.debug(list.toString());

                if (Pf.contains(pf)) {
                    /*pf == 1.0E-4 || pf == 3.0E-4*/
                    if (Pf.size() == 1) {
                        dataset.add(list, popsize, getTechniqueName(mode));
                    } else {
                        dataset.add(list, String.valueOf(popsize) + "-" + pf + "\n", getTechniqueName(mode));
                    }
                }
            }
        }

    }

    /*for (int i = 0; i < seriesCount; i++) {
     for (int j = 0; j < categoryCount; j++) {
     final List list = new ArrayList();
     // add some values...
     for (int k = 0; k < entityCount; k++) {
     final double value1 = 10.0 + Math.random() * 3;
     list.add(new Double(value1));
     final double value2 = 11.25 + Math.random(); // concentrate values in the middle
     list.add(new Double(value2));
     }
     LOGGER.debug("Adding series " + i);
     LOGGER.debug(list.toString());
     dataset.add(list, "Series " + i, " Type " + j);
     }
            
     }*/
    return dataset;
}

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From source file:gui.TraitViewerDialog.java

@SuppressWarnings("rawtypes")
private ChartPanel getChart(int selectedRow) {

    ArrayList<Float> data = new ArrayList<Float>();
    for (float[] row : tFile.getRows()) {
        if (row[selectedRow + 1] != (float) -99.0) {
            data.add(row[selectedRow + 1]);
        }/*from   w ww.ja  v a 2  s .c om*/
    }
    BoxAndWhiskerItem a = BoxAndWhiskerCalculator.calculateBoxAndWhiskerStatistics(data);
    java.util.List l = new ArrayList(0);

    a = new BoxAndWhiskerItem(a.getMean(), a.getMedian(), a.getQ1(), a.getQ3(), a.getMinRegularValue(),
            a.getMaxRegularValue(), a.getMinRegularValue(), a.getMaxRegularValue(), l);
    traitstats.setText(showBoxAndWhiskerItem(a));

    DefaultBoxAndWhiskerCategoryDataset ds2 = new DefaultBoxAndWhiskerCategoryDataset();

    ds2.add(a, (Comparable) 1, (Comparable) 1);
    JFreeChart chart = ChartFactory.createBoxAndWhiskerChart(null, null, null, ds2, false);

    chart.removeLegend();

    // XYPlot plot = chart.getXYPlot();
    CategoryPlot plot = chart.getCategoryPlot();
    plot.getDomainAxis().setVisible(false);
    BoxAndWhiskerRenderer b = (BoxAndWhiskerRenderer) plot.getRenderer();
    // b.setFillBox(false);
    b.setSeriesPaint(0, new Color(236, 55, 169));
    b.setSeriesOutlinePaint(1, new Color(131, 79, 112));
    b.setBaseOutlineStroke(new BasicStroke(1.0f));
    // b.get
    b.setWhiskerWidth(0.8);
    b.setBaseOutlinePaint(new Color(84, 144, 201));
    b.setDefaultEntityRadius(2);
    b.setMaximumBarWidth(0.18);

    ChartPanel chartPanel = new ChartPanel(chart);
    chartPanel.setPopupMenu(null);
    return chartPanel;
}

---

From source file:edu.gmu.cs.sim.util.media.chart.BoxPlotGenerator.java

protected void update() {
    // We have to rebuild the dataset from scratch (deleting and replacing it) because JFreeChart's
    // BoxPlot facility doesn't have a way to remove or move elements.  Stupid stupid stupid.

    SeriesAttributes[] sa = getSeriesAttributes();
    DefaultBoxAndWhiskerCategoryDataset dataset = new DefaultBoxAndWhiskerCategoryDataset();

    for (int i = 0; i < sa.length; i++) {
        BoxPlotSeriesAttributes attributes = (BoxPlotSeriesAttributes) (sa[i]);
        double[][] values = attributes.getValues();
        String[] labels = attributes.getLabels();
        //UniqueString series = new UniqueString(attributes.getSeriesName());
        String series = attributes.getSeriesName();
        for (int j = 0; j < values.length; j++) {
            dataset.add(buildList(values[j]), series, labels[j]);
        }/*from   ww  w  . ja  va2  s  .  c  om*/
    }

    ((BoxAndWhiskerRenderer) (((CategoryPlot) (chart.getPlot())).getRenderer()))
            .setMaximumBarWidth(getMaximumWidth());

    setSeriesDataset(dataset);
}

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