Example usage for org.apache.commons.lang ArrayUtils toObject

Introduction

In this page you can find the example usage for org.apache.commons.lang ArrayUtils toObject.

Prototype

public static Boolean[] toObject(boolean[] array) 

Source Link

Document

Converts an array of primitive booleans to objects.

Usage

From source file:edu.harvard.iq.dvn.ingest.statdataio.impl.plugins.por.PORFileReader.java

private void decodeSec2(BufferedReader reader) throws IOException {
    dbgLog.fine("***** decodeSec2(): start *****");
    if (reader == null) {
        throw new IllegalArgumentException("decodeSec2: stream == null!");
    }// w  w  w  .  j av a2  s .  c om

    // Because a 64-bit machine may not save the first 40
    // bytes of a POR file in a way as a 32-bit machine does,
    // the first 5 lines of a POR file is excluded from the read-back
    // file and the new 1st line contains the format mark "SPSSPORT"
    // somewhere in it.

    // mark the start position for the later rewind
    if (reader.markSupported()) {
        reader.mark(100000);
    }

    char[] sixthLineCharArray = new char[80];
    int nbytes_sixthLine = reader.read(sixthLineCharArray);

    String sixthLine = new String(sixthLineCharArray);
    dbgLog.info("sixthLineCharArray=" + Arrays.deepToString(ArrayUtils.toObject(sixthLineCharArray)));
    int signatureLocation = sixthLine.indexOf(POR_MARK);

    if (signatureLocation >= 0) {
        dbgLog.info("format signature was found at:" + signatureLocation);
    } else {
        dbgLog.severe("signature string was not found");
        throw new IOException("signature string was not found");
    }

    // rewind the position to the beginning
    reader.reset();

    // skip bytes up to the signature string
    long skippedBytes = reader.skip(signatureLocation);

    char[] sec2_leader = new char[POR_MARK.length()];
    int nbytes_sec2_leader = reader.read(sec2_leader);

    String leader_string = new String(sec2_leader);

    dbgLog.info("format signature [SPSSPORT] detected=" + leader_string);

    if (leader_string.equals("SPSSPORT")) {
        dbgLog.info("signature was correctly detected");

    } else {
        dbgLog.severe("the format signature is not found at the previously located column");
        throw new IOException("decodeSec2: failed to find the signature string");
    }

    int length_section_2 = LENGTH_SECTION_2;

    char[] Sec2_bytes = new char[length_section_2];

    int nbytes_sec2 = reader.read(Sec2_bytes);

    if (nbytes_sec2 == 0) {
        dbgLog.severe("decodeSec2: reading error");
        throw new IOException("decodeSec2: reading error");
    } else {
        dbgLog.fine("bytes read=" + nbytes_sec2);
    }

    String sec2 = new String(Sec2_bytes);
    dbgLog.fine("sec2[creation date/time]=" + sec2);

    // sec2
    //       0123456789012345678
    //       A8/YYYYMMDD6/HHMMSS
    // thus
    // section2 should has 3 elements

    String[] section2 = StringUtils.split(sec2, '/');

    dbgLog.fine("section2=" + StringUtils.join(section2, "|"));

    String fileCreationDate = null;
    String fileCreationTime = null;
    if ((section2.length == 3) && (section2[0].startsWith("A"))) {
        fileCreationDate = section2[1].substring(0, 7);
        fileCreationTime = section2[2];
    } else {
        dbgLog.severe("decodeSec2: file creation date/time were not correctly detected");
        throw new IOException("decodeSec2: file creation date/time were not correctly detected");
    }
    dbgLog.fine("fileCreationDate=" + fileCreationDate);
    dbgLog.fine("fileCreationTime=" + fileCreationTime);
    smd.getFileInformation().put("fileCreationDate", fileCreationDate);
    smd.getFileInformation().put("fileCreationTime", fileCreationTime);
    smd.getFileInformation().put("varFormat_schema", "SPSS");
}

---

From source file:com.opengamma.analytics.math.curve.InterpolatedDoublesCurve.java

@Override
public Double[] getYValueParameterSensitivity(final Double x) {
    Validate.notNull(x, "x");
    return ArrayUtils.toObject(_interpolator.getNodeSensitivitiesForValue(_dataBundle, x));
}

---

From source file:eionet.meta.dao.mysql.DataElementDAOImpl.java

/**
 * {@inheritDoc}/*from w  w w  . j  a v a 2s  .  c  o m*/
 */
@Override
public Map<Integer, List<List<DataElement>>> getVocabularyConceptsDataElementValues(int vocabularyFolderId,
        int[] vocabularyConceptIds, boolean emptyAttributes) {
    // this does not work for IN type, although it is recommended!!!!
    // final MapSqlParameterSource params = new MapSqlParameterSource();
    //
    // params.addValue("vocabularyFolderId", vocabularyFolderId);
    // params.addValue("vocabularyConceptIds", vocabularyConceptIds);

    final Map<String, Object> params = new HashMap<String, Object>();
    params.put("vocabularyFolderId", vocabularyFolderId);
    // to work in "IN" clause, it should be list of Integer objects.
    params.put("vocabularyConceptIds", Arrays.asList(ArrayUtils.toObject(vocabularyConceptIds)));

    StringBuilder sql = new StringBuilder();
    sql.append("select * from VOCABULARY_CONCEPT_ELEMENT v ");
    if (emptyAttributes) {
        sql.append("RIGHT OUTER JOIN DATAELEM d ");
    } else {
        sql.append("LEFT JOIN DATAELEM d ");
    }
    sql.append("ON (v.DATAELEM_ID = d.DATAELEM_ID and v.VOCABULARY_CONCEPT_ID in (:vocabularyConceptIds)) ");
    sql.append("LEFT JOIN VOCABULARY2ELEM ve on ve.DATAELEM_ID = d.DATAELEM_ID ");
    sql.append("LEFT JOIN VOCABULARY_CONCEPT rc on v.RELATED_CONCEPT_ID = rc.VOCABULARY_CONCEPT_ID ");
    sql.append("LEFT JOIN VOCABULARY rcv ON rc.VOCABULARY_ID = rcv.VOCABULARY_ID ");
    sql.append("LEFT JOIN VOCABULARY_SET rcvs ON rcv.FOLDER_ID = rcvs.ID ");
    sql.append("where ve.VOCABULARY_ID = :vocabularyFolderId ");
    sql.append("order by v.VOCABULARY_CONCEPT_ID, ve.DATAELEM_ID, v.ELEMENT_VALUE, rc.IDENTIFIER");

    final Map<Integer, List<List<DataElement>>> result = new HashMap<Integer, List<List<DataElement>>>();

    getNamedParameterJdbcTemplate().query(sql.toString(), params, new RowCallbackHandler() {

        List<List<DataElement>> listOfValues = null;
        List<DataElement> values = null;
        int previousDataElemId = -1;
        int previousConceptId = -1;

        @Override
        public void processRow(ResultSet rs) throws SQLException {
            int conceptId = rs.getInt("v.VOCABULARY_CONCEPT_ID");
            int dataElemId = rs.getInt("d.DATAELEM_ID");

            if (previousConceptId != conceptId) {
                listOfValues = new ArrayList<List<DataElement>>();
                result.put(conceptId, listOfValues);
                values = new ArrayList<DataElement>();
                listOfValues.add(values);
            } else if (previousDataElemId != dataElemId) {
                values = new ArrayList<DataElement>();
                listOfValues.add(values);
            }

            previousConceptId = conceptId;
            previousDataElemId = dataElemId;

            DataElement de = new DataElement();
            de.setId(dataElemId);
            de.setShortName(rs.getString("d.SHORT_NAME"));
            de.setStatus(rs.getString("d.REG_STATUS"));
            de.setType(rs.getString("d.TYPE"));
            de.setModified(new Date(rs.getLong("d.DATE")));
            de.setWorkingUser(rs.getString("d.WORKING_USER"));

            de.setIdentifier(rs.getString("d.identifier"));

            de.setAttributeValue(rs.getString("v.ELEMENT_VALUE"));
            de.setAttributeLanguage(rs.getString("v.LANGUAGE"));
            de.setRelatedConceptId(rs.getInt("v.RELATED_CONCEPT_ID"));

            de.setRelatedConceptIdentifier(rs.getString("rc.IDENTIFIER"));
            de.setRelatedConceptLabel(rs.getString("rc.LABEL"));
            de.setRelatedConceptVocabulary(rs.getString("rcv.IDENTIFIER"));
            de.setRelatedConceptBaseURI(rs.getString("rcv.BASE_URI"));
            de.setRelatedConceptVocSet(rs.getString("rcvs.IDENTIFIER"));
            de.setVocabularyId(rs.getInt("d.VOCABULARY_ID"));

            de.setRelatedConceptOriginalId(rs.getInt("rc.ORIGINAL_CONCEPT_ID"));
            de.setRelatedVocabularyStatus(rs.getString("rcv.REG_STATUS"));
            de.setRelatedVocabularyWorkingCopy(rs.getInt("rcv.WORKING_COPY") == 1);
            List<FixedValue> fxvs = getFixedValues(de.getId());
            de.setFixedValues(fxvs);
            de.setElemAttributeValues(getDataElementAttributeValues(dataElemId));

            values.add(de);
        }
    });

    if (emptyAttributes && result.get(0) != null) {
        if (result.containsKey(vocabularyConceptIds[0])) {
            result.get(vocabularyConceptIds[0]).addAll(result.get(0));
        } else {
            result.put(vocabularyConceptIds[0], result.get(0));
        }
    }

    // fill empty lists for not found concepts
    for (int conceptId : vocabularyConceptIds) {
        if (!result.containsKey(conceptId)) {
            result.put(conceptId, new ArrayList<List<DataElement>>());
        }
    }

    return result;
}

---

From source file:edu.harvard.iq.dataverse.ingest.tabulardata.impl.plugins.por.PORFileReader.java

private void decodeSec2(BufferedReader reader) throws IOException {
    dbgLog.fine("decodeSec2(): start");
    if (reader == null) {
        throw new IllegalArgumentException("decodeSec2: stream == null!");
    }/*from   w  ww .  jav a2 s  .c  o  m*/

    // Because a 64-bit machine may not save the first 40
    // bytes of a POR file in a way as a 32-bit machine does,
    // the first 5 lines of a POR file is excluded from the read-back
    // file and the new 1st line contains the format mark "SPSSPORT"
    // somewhere in it.

    // mark the start position for the later rewind
    if (reader.markSupported()) {
        reader.mark(100000);
    }

    char[] sixthLineCharArray = new char[80];
    int nbytes_sixthLine = reader.read(sixthLineCharArray);

    String sixthLine = new String(sixthLineCharArray);
    dbgLog.fine("sixthLineCharArray=" + Arrays.deepToString(ArrayUtils.toObject(sixthLineCharArray)));
    int signatureLocation = sixthLine.indexOf(POR_MARK);

    if (signatureLocation >= 0) {
        dbgLog.fine("format signature was found at:" + signatureLocation);
    } else {
        dbgLog.severe("signature string was not found");
        throw new IOException("signature string was not found");
    }

    // rewind the position to the beginning
    reader.reset();

    // skip bytes up to the signature string
    long skippedBytes = reader.skip(signatureLocation);

    char[] sec2_leader = new char[POR_MARK.length()];
    int nbytes_sec2_leader = reader.read(sec2_leader);

    String leader_string = new String(sec2_leader);

    dbgLog.fine("format signature [SPSSPORT] detected=" + leader_string);

    if (leader_string.equals("SPSSPORT")) {
        dbgLog.fine("signature was correctly detected");

    } else {
        dbgLog.severe("the format signature is not found at the previously located column");
        throw new IOException("decodeSec2: failed to find the signature string");
    }

    int length_section_2 = LENGTH_SECTION_2;

    char[] Sec2_bytes = new char[length_section_2];

    int nbytes_sec2 = reader.read(Sec2_bytes);

    if (nbytes_sec2 == 0) {
        dbgLog.severe("decodeSec2: reading error");
        throw new IOException("decodeSec2: reading error");
    } else {
        dbgLog.fine("bytes read=" + nbytes_sec2);
    }

    String sec2 = new String(Sec2_bytes);
    dbgLog.fine("sec2[creation date/time]=" + sec2);

    // sec2
    //       0123456789012345678
    //       A8/YYYYMMDD6/HHMMSS
    // thus
    // section2 should has 3 elements

    String[] section2 = StringUtils.split(sec2, '/');

    dbgLog.fine("section2=" + StringUtils.join(section2, "|"));

    String fileCreationDate = null;
    String fileCreationTime = null;
    if ((section2.length == 3) && (section2[0].startsWith("A"))) {
        fileCreationDate = section2[1].substring(0, 7);
        fileCreationTime = section2[2];
    } else {
        dbgLog.severe("decodeSec2: file creation date/time were not correctly detected");
        throw new IOException("decodeSec2: file creation date/time were not correctly detected");
    }
    dbgLog.fine("fileCreationDate=" + fileCreationDate);
    dbgLog.fine("fileCreationTime=" + fileCreationTime);
    ///smd.getFileInformation().put("fileCreationDate", fileCreationDate);
    ///smd.getFileInformation().put("fileCreationTime", fileCreationTime);
    ///smd.getFileInformation().put("varFormat_schema", "SPSS");
    dbgLog.fine("decodeSec2(): end");
}

---

From source file:com.senseidb.svc.impl.HttpRestSenseiServiceImpl.java

public static String join(boolean[] arr, String delimiter) {
    return join(Arrays.asList(ArrayUtils.toObject(arr)), delimiter);
}

---

From source file:com.senseidb.svc.impl.HttpRestSenseiServiceImpl.java

public static String join(byte[] arr, String delimiter) {
    return join(Arrays.asList(ArrayUtils.toObject(arr)), delimiter);
}

---

From source file:com.senseidb.svc.impl.HttpRestSenseiServiceImpl.java

public static String join(int[] arr, String delimiter) {
    return join(Arrays.asList(ArrayUtils.toObject(arr)), delimiter);
}

---

From source file:com.senseidb.svc.impl.HttpRestSenseiServiceImpl.java

public static String join(long[] arr, String delimiter) {
    return join(Arrays.asList(ArrayUtils.toObject(arr)), delimiter);
}

---

From source file:com.senseidb.svc.impl.HttpRestSenseiServiceImpl.java

public static String join(double[] arr, String delimiter) {
    return join(Arrays.asList(ArrayUtils.toObject(arr)), delimiter);
}

---

From source file:com.flexive.war.beans.admin.main.AccountBean.java

/**
 * Retrieves all users, filtering by loginName, userName, email, active, vaidated and mandatorFilter.
 *
 * @return all users matching the filter criterias.
 *//* w w w  .j a v a 2 s  . c o m*/
public List<Account> getList() {
    final UserTicket ticket = FxContext.getUserTicket();
    try {
        long _mandatorFilter = getMandatorFilter();

        // If not supervisor fallback to the own mandator
        if (!ticket.isGlobalSupervisor()) {
            _mandatorFilter = ticket.getMandatorId();
        }

        long[] userGroupIds = new long[1];
        if (groupFilter != -1) {
            userGroupIds[0] = groupFilter;
        } else {
            userGroupIds = null;
        }

        // Load list if needed, and cache within the request
        String cacheKey = account.getName() + "_" + account.getLoginName() + "_" + account.getEmail() + "_"
                + isActiveFilter() + "_" + isValidatedFilter() + "_" + _mandatorFilter + "_"
                + StringUtils.join(ArrayUtils.toObject(userGroupIds), ',');
        List<Account> result = listCache.get(cacheKey);
        if (result == null) {
            result = getAccountEngine().loadAll(null, null, null, isActiveFilter() ? true : null,
                    isValidatedFilter() ? true : null, _mandatorFilter, null, userGroupIds, 0, -1);
            listCache.put(cacheKey, result);
        }
        return result;

    } catch (Exception exc) {
        new FxFacesMsgErr(exc).addToContext();
        return new ArrayList<Account>(0);
    }
}

---

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