Example usage for org.apache.wicket.ajax AjaxRequestTarget add

List of usage examples for org.apache.wicket.ajax AjaxRequestTarget add

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Introduction

In this page you can find the example usage for org.apache.wicket.ajax AjaxRequestTarget add.

Prototype

void add(Component... components);

Source Link

Document

Adds components to the list of components to be rendered.

Usage

From source file:au.org.theark.lims.web.component.biospecimenupload.BiospecimenUploadStep4.java

License:Open Source License

@Override
public void onStepInNext(AbstractWizardForm<?> form, AjaxRequestTarget target) {
    form.getNextButton().setEnabled(true);
    target.add(form.getNextButton());

    form.getArkExcelWorkSheetAsGrid().setVisible(false);
    target.add(form.getArkExcelWorkSheetAsGrid());
}

From source file:au.org.theark.lims.web.component.biospecimenupload.BiospecimenUploadStep4.java

License:Open Source License

@Override
public void onStepOutNext(AbstractWizardForm<?> form, AjaxRequestTarget target) {
    form.getNextButton().setEnabled(false);
    target.add(form.getNextButton());

    // Filename seems to be lost from model when moving between steps in wizard
    containerForm.getModelObject().getUpload().setFilename(wizardForm.getFileName());

    // Perform actual import of data
    containerForm.getModelObject().getUpload().setStartTime(new Date(System.currentTimeMillis()));

    String fileFormat = containerForm.getModelObject().getUpload().getFileFormat().getName();
    char delimiterChar = containerForm.getModelObject().getUpload().getDelimiterType().getDelimiterCharacter();
    StringBuffer uploadReport = new StringBuffer("");
    try {//ww  w  .  j  a v  a  2 s.com
        InputStream inputStream = containerForm.getModelObject().getFileUpload().getInputStream();
        String uploadType = containerForm.getModelObject().getUploadType();
        log.info("upload type ---=" + uploadType);
        if (uploadType.equalsIgnoreCase(au.org.theark.lims.web.Constants.UPLOAD_TYPE_FOR_BIOCOLLECTION)) {
            uploadReport = iLimsService.uploadAndReportMatrixBiocollectionFile(
                    containerForm.getModelObject().getUpload().getStudy(), inputStream,
                    containerForm.getModelObject().getFileUpload().getSize(), fileFormat, delimiterChar);
        } else if (uploadType
                .equalsIgnoreCase(au.org.theark.lims.web.Constants.UPLOAD_TYPE_FOR_BIOSPECIMEN_INVENTARY)) {
            uploadReport = iLimsService.uploadAndReportMatrixBiospecimenInventoryFile(
                    containerForm.getModelObject().getUpload().getStudy(), inputStream,
                    containerForm.getModelObject().getFileUpload().getSize(), fileFormat, delimiterChar);
        } else if (uploadType.equalsIgnoreCase(au.org.theark.lims.web.Constants.UPLOAD_TYPE_FOR_BIOSPECIMEN)) {
            uploadReport = iLimsService.uploadAndReportMatrixBiospecimenFile(
                    containerForm.getModelObject().getUpload().getStudy(), inputStream,
                    containerForm.getModelObject().getFileUpload().getSize(), fileFormat, delimiterChar);
        }
    } catch (IOException e) {
        e.printStackTrace();
    }

    // Update the report
    updateUploadReport(uploadReport.toString());

    // Save all objects to the database
    save(target);
}

From source file:au.org.theark.lims.web.component.biospecimenupload.form.SearchForm.java

License:Open Source License

@SuppressWarnings("unchecked")
@Override//from  w  w w . j av a 2  s.co m
protected void onSearch(AjaxRequestTarget target) {
    target.add(feedbackPanel);

    // Set study in context
    Long studyId = (Long) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
    // Get a list of all Fields for the Study in context
    Study study = iArkCommonService.getStudy(studyId);

    Upload searchUpload = getModelObject().getUpload();
    searchUpload.setStudy(study);

    java.util.Collection<Upload> uploadCollection = iArkCommonService.searchUploads(searchUpload);

    if (uploadCollection != null && uploadCollection.size() == 0) {
        this.info("Uploads with the specified criteria does not exist in the system.");
        target.add(feedbackPanel);
    }

    getModelObject().setUploadCollection(uploadCollection);

    listView.removeAll();
    arkCrudContainerVO.getSearchResultPanelContainer().setVisible(true);// Make the WebMarkupContainer that houses the search results visible
    target.add(arkCrudContainerVO.getSearchResultPanelContainer());
}

From source file:au.org.theark.lims.web.component.biotransaction.BioTransactionListPanel.java

License:Open Source License

private void initialiseDataView() {
    dataViewListWMC = new WebMarkupContainer("dataViewListWMC");
    dataViewListWMC.setOutputMarkupId(true);
    // Data provider to paginate resultList
    bioTransactionProvider = new ArkDataProvider2<LimsVO, BioTransaction>() {

        private static final long serialVersionUID = 1L;

        public int size() {
            return (int) iLimsService.getBioTransactionCount(criteriaModel.getObject().getBioTransaction());
        }//ww w .jav a  2s. c  om

        public Iterator<BioTransaction> iterator(int first, int count) {
            List<BioTransaction> biospecimenList = new ArrayList<BioTransaction>();
            if (ArkPermissionHelper.isActionPermitted(au.org.theark.core.Constants.SEARCH)) {
                biospecimenList = iLimsService.searchPageableBioTransactions(
                        criteriaModel.getObject().getBioTransaction(), first, count);
            }
            return biospecimenList.iterator();
        }
    };
    // Set the criteria into the data provider's model
    bioTransactionProvider.setCriteriaModel(cpModel);

    dataView = buildDataView(bioTransactionProvider);
    dataView.setItemsPerPage(
            iArkCommonService.getUserConfig(au.org.theark.core.Constants.CONFIG_ROWS_PER_PAGE).getIntValue());

    AjaxPagingNavigator pageNavigator = new AjaxPagingNavigator("navigator", dataView) {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onAjaxEvent(AjaxRequestTarget target) {
            target.add(dataViewListWMC);
        }
    };
    dataViewListWMC.add(pageNavigator);
    dataViewListWMC.add(dataView);
    add(dataViewListWMC);

}

From source file:au.org.theark.lims.web.component.biotransaction.BioTransactionListPanel.java

License:Open Source License

/**
 * //w w  w  . j a  v  a2  s.  c o m
 * @param iModel
 * @return the pageableListView of BioCollection
 */
public DataView<BioTransaction> buildDataView(ArkDataProvider2<LimsVO, BioTransaction> bioTransactionProvider) {

    final SimpleDateFormat simpleDateFormat = new SimpleDateFormat(au.org.theark.core.Constants.DD_MM_YYYY);

    DataView<BioTransaction> bioTransactionDataView = new DataView<BioTransaction>("bioTransactionList",
            bioTransactionProvider) {

        private static final long serialVersionUID = 1L;

        @Override
        protected void populateItem(final Item<BioTransaction> item) {
            item.setOutputMarkupId(true);
            // DO NOT store the item.getModelObject! Checking it is ok...
            final BioTransaction bioTransaction = item.getModelObject();

            WebMarkupContainer rowDetailsWMC = new WebMarkupContainer("rowDetailsWMC", item.getModel());
            AjaxConfirmLink<BioTransaction> rowDeleteLink = new AjaxConfirmLink<BioTransaction>("rowDeleteLink",
                    new StringResourceModel("bioTransaction.confirmDelete", this, item.getModel()),
                    item.getModel()) {

                private static final long serialVersionUID = 1L;

                @Override
                public void onClick(AjaxRequestTarget target) {
                    BioTransaction bioTransaction = getModelObject();
                    iLimsService.deleteBioTransaction(bioTransaction);

                    // update biospecimen (qty avail)
                    Double qtyAvail = iLimsService.getQuantityAvailable(cpModel.getObject().getBiospecimen());
                    cpModel.getObject().getBiospecimen().setQuantity(qtyAvail);
                    try {
                        iLimsService.updateBiospecimen(cpModel.getObject());
                    } catch (ArkSystemException e) {
                        this.error(e.getMessage());
                    }

                    this.info("Successfully removed the transaction");
                    target.add(feedbackPanel);
                    target.add(dataViewListWMC); // repaint the list
                    target.add(dataViewListWMC.getParent().getParent()); // repaint the parent form
                }

            };
            rowDetailsWMC.add(rowDeleteLink);
            //            if ((bioTransaction.getStatus() != null) && (bioTransaction.getStatus().getName().equalsIgnoreCase(Constants.BIOTRANSACTION_STATUS_INITIAL_QUANTITY))) {
            //               // do not allow the initial quantity to be deleted
            //               rowDetailsWMC.setVisible(false);
            //            }

            idLbl = new Label("bioTransaction.id", bioTransaction.getId().toString());
            String dateOfTransaction = "";
            if (bioTransaction.getTransactionDate() != null) {
                dateOfTransaction = simpleDateFormat.format(bioTransaction.getTransactionDate());
            }
            transactionDateLbl = new Label("bioTransaction.transactionDate", dateOfTransaction);

            if (bioTransaction.getQuantity() == null) {
                quantityLbl = new Label("bioTransaction.quantity", "0");
            } else {
                quantityLbl = new Label("bioTransaction.quantity", bioTransaction.getQuantity().toString());
            }
            if (bioTransaction.getBiospecimen().getUnit() == null) {
                unitsLbl = new Label("bioTransaction.biospecimen.unit.name", "");
            } else {
                unitsLbl = new Label("bioTransaction.biospecimen.unit.name",
                        bioTransaction.getBiospecimen().getUnit().getName());
            }
            reasonLbl = new Label("bioTransaction.reason", bioTransaction.getReason());
            recorderLbl = new Label("bioTransaction.recorder", bioTransaction.getRecorder());
            if (bioTransaction.getStatus() == null) {
                statusLbl = new Label("bioTransaction.status.name", "");
            } else {
                statusLbl = new Label("bioTransaction.status.name", bioTransaction.getStatus().getName());
            }
            if (bioTransaction.getAccessRequest() == null) {
                requestLbl = new Label("bioTransaction.accessRequest.id", "");
            } else {
                requestLbl = new Label("bioTransaction.accessRequest.id",
                        bioTransaction.getAccessRequest().getId().toString());
            }

            item.add(idLbl);
            item.add(transactionDateLbl);

            if (bioTransaction.getQuantity() > 0) {
                quantityImage = new ContextImage("bioTransaction.quantityImage",
                        new Model<String>("images/icons/arrow_up.png"));
            } else {
                quantityImage = new ContextImage("bioTransaction.quantityImage",
                        new Model<String>("images/icons/arrow_down_red.png"));
            }

            item.add(quantityImage);
            item.add(quantityLbl);
            item.add(unitsLbl);
            item.add(reasonLbl);
            item.add(recorderLbl);
            item.add(statusLbl);
            item.add(requestLbl);
            item.add(rowDetailsWMC);

            item.add(new AttributeModifier(Constants.CLASS, new AbstractReadOnlyModel<String>() {
                private static final long serialVersionUID = 1L;

                @Override
                public String getObject() {
                    return (item.getIndex() % 2 == 1) ? Constants.EVEN : Constants.ODD;
                }
            }));
        }

    };

    return bioTransactionDataView;
}

From source file:au.org.theark.lims.web.component.biotransaction.form.BioTransactionListForm.java

License:Open Source License

private void initSaveButton() {
    saveButton = new ArkBusyAjaxButton("saveButton") {
        private static final long serialVersionUID = 1L;

        @Override//from  ww  w . j  a  v  a 2s  . c o m
        public boolean isVisible() {
            return true;
        }

        @Override
        protected void onSubmit(AjaxRequestTarget target, Form<?> form) {
            // Set defaults
            //cpModel.getObject().getBioTransaction().setTransactionDate(new Date());
            cpModel.getObject().getBioTransaction()
                    .setRecorder(SecurityUtils.getSubject().getPrincipals().getPrimaryPrincipal().toString());

            Double qtyAvail = iLimsService.getQuantityAvailable(cpModel.getObject().getBiospecimen());
            Double txnQuantity = cpModel.getObject().getBioTransaction().getQuantity();

            if (txnQuantity == null) {
                error("Field 'Quantity' is required");
                target.add(feedbackPanel);
            } else if (cpModel.getObject().getBioTransaction().getStatus() == null) {
                error("Field 'Status' is required");
                target.add(feedbackPanel);
            } else {
                // Make quantity minus if positive and Aliquoted, Processed or   Delivered
                String status = cpModel.getObject().getBioTransaction().getStatus().getName();
                if (status != null
                        && (status.equalsIgnoreCase("Aliquoted") || status.equalsIgnoreCase("Processed")
                                || status.equalsIgnoreCase("Delivered"))
                        && txnQuantity != null && txnQuantity > 0) {
                    txnQuantity = (-1 * txnQuantity);
                    cpModel.getObject().getBioTransaction().setQuantity(txnQuantity);
                }

                // Check that quantity specified not greater than available
                if (txnQuantity < 0 && (Math.abs(txnQuantity) > (qtyAvail == null ? 0 : qtyAvail))) {
                    error("When aliquoting, processing or delivering, transaction quantity may not exceed total quantity available.");
                    target.add(feedbackPanel);
                } else {
                    cpModel.getObject().getBioTransaction()
                            .setUnit(cpModel.getObject().getBiospecimen().getUnit()); //TODO: Unit
                    iLimsService.createBioTransaction(cpModel.getObject());
                    info("Transaction saved successfully");

                    // update biospecimen (qty avail)
                    qtyAvail = iLimsService.getQuantityAvailable(cpModel.getObject().getBiospecimen());
                    cpModel.getObject().getBiospecimen().setQuantity(qtyAvail);
                    try {
                        iLimsService.updateBiospecimen(cpModel.getObject());
                    } catch (ArkSystemException e) {
                        this.error(e.getMessage());
                    }

                    // refresh transaction form
                    BioTransaction bioTransaction = new BioTransaction();
                    bioTransaction.setBiospecimen(cpModel.getObject().getBiospecimen());
                    bioTransaction.setUnit(cpModel.getObject().getBiospecimen().getUnit()); //TODO: Unit
                    cpModel.getObject().setBioTransaction(bioTransaction);

                    target.add(form.getParent().getParent());
                    target.add(feedbackPanel);
                }
            }
        }

        //         @Override
        //         public boolean isEnabled() {
        //            Biospecimen b = cpModel.getObject().getBiospecimen();
        //            if(b==null){
        //               return false;
        //            }
        //            Double qa = iLimsService.getQuantityAvailable(b);
        //            return (qa != null && qa > 0);
        //         }

        @Override
        protected void onError(AjaxRequestTarget target, Form<?> form) {
            target.add(feedbackPanel);
        }
    };
}

From source file:au.org.theark.lims.web.component.bioupload.BioUploadStep2.java

License:Open Source License

@Override
public void onStepInNext(AbstractWizardForm<?> form, AjaxRequestTarget target) {
    try {/*from  w  ww.j  av  a  2  s. co  m*/
        FileUpload fileUpload = containerForm.getModelObject().getFileUpload();
        InputStream inputStream = fileUpload.getInputStream();//TODO : should something this big be thrown around model object in wicket?
        String filename = fileUpload.getClientFileName();
        String fileFormat = filename.substring(filename.lastIndexOf('.') + 1).toUpperCase();
        char delimChar = containerForm.getModelObject().getUpload().getDelimiterType().getDelimiterCharacter();

        // Only allow csv, txt or xls  TODO : if we are hardcoding things like this, why do we fetch file formats from db and store as a fk reference?
        if (!(fileFormat.equalsIgnoreCase("CSV") || fileFormat.equalsIgnoreCase("TXT")
                || fileFormat.equalsIgnoreCase("XLS"))) {
            throw new FileFormatException();
        }
        //TODO: remove hardcode
        if (containerForm.getModelObject().getUpload().getUploadType().getName()
                .equalsIgnoreCase("Biospecimen Custom Data")) {
            BioCustomFieldUploadValidator subjectUploadValidator = new BioCustomFieldUploadValidator(
                    iArkCommonService, iLimsService);
            validationMessages = subjectUploadValidator
                    .validateBiospecimenCustomFieldFileFormat(containerForm.getModelObject());
        } else if (containerForm.getModelObject().getUpload().getUploadType().getName()
                .equalsIgnoreCase("Biocollection Custom Data")) {
            //TODO : custom field validation
            BioCustomFieldUploadValidator customFieldUploadValidator = new BioCustomFieldUploadValidator(
                    iArkCommonService, iLimsService);
            validationMessages = customFieldUploadValidator
                    .validateBiocollectionCustomFieldFileFormat(containerForm.getModelObject());
        } else {
            //TODO : Throw error back to user
        }

        ArkExcelWorkSheetAsGrid arkExcelWorkSheetAsGrid = new ArkExcelWorkSheetAsGrid("gridView", inputStream,
                fileFormat, delimChar, fileUpload, iArkCommonService
                        .getUserConfig(au.org.theark.core.Constants.CONFIG_ROWS_PER_PAGE).getIntValue(),
                containerForm.getModelObject().getUpload().getUploadType());
        arkExcelWorkSheetAsGrid.setOutputMarkupId(true);
        WebMarkupContainer wizardDataGridKeyContainer = new WebMarkupContainer("wizardDataGridKeyContainer");
        wizardDataGridKeyContainer.setVisible(false);
        wizardDataGridKeyContainer.setOutputMarkupId(true);
        form.setArkExcelWorkSheetAsGrid(arkExcelWorkSheetAsGrid);
        form.getWizardPanelFormContainer().addOrReplace(arkExcelWorkSheetAsGrid);
        form.setArkExcelWorkSheetAsGrid(arkExcelWorkSheetAsGrid);
        form.getWizardPanelFormContainer().addOrReplace(wizardDataGridKeyContainer);
        target.add(form.getWizardPanelFormContainer());

        containerForm.getModelObject().setValidationMessages(validationMessages);
        validationMessage = containerForm.getModelObject().getValidationMessagesAsString();
        addOrReplace(new MultiLineLabel("multiLineLabel", validationMessage));

        if (validationMessage != null && validationMessage.length() > 0) {
            log.warn("validation = " + validationMessage);
            form.getNextButton().setEnabled(false);
            target.add(form.getWizardButtonContainer());
            downloadValMsgButton = new ArkDownloadAjaxButton("downloadValMsg", "ValidationMessage",
                    validationMessage, "txt") {
                private static final long serialVersionUID = 1L;

                @Override
                protected void onError(AjaxRequestTarget target, Form<?> form) {
                    this.error("Unexpected Error: Download request could not be processed");
                }
            };
            addOrReplace(downloadValMsgButton);
            target.add(downloadValMsgButton);
        }

    } catch (IOException e) {
        validationMessage = "Error attempting to display the file. Please check the file and try again.";
        addOrReplace(new MultiLineLabel("multiLineLabel", validationMessage));
        form.getNextButton().setEnabled(false);
        target.add(form.getWizardButtonContainer());
    } catch (FileFormatException ffe) {
        validationMessage = "Error uploading file. You can only upload files of type: CSV (comma separated values), TXT (text), or XLS (Microsoft Excel file)";
        addOrReplace(new MultiLineLabel("multiLineLabel", validationMessage));
        form.getNextButton().setEnabled(false);
        target.add(form.getWizardButtonContainer());
    }
    //TODO : finally?  close io?
}

From source file:au.org.theark.lims.web.component.bioupload.BioUploadStep3.java

License:Open Source License

@Override
public void onStepInNext(AbstractWizardForm<?> form, AjaxRequestTarget target) {
    try {//from  w w w  .j  a v  a 2 s  . com
        String filename = containerForm.getModelObject().getFileUpload().getClientFileName();
        String fileFormat = filename.substring(filename.lastIndexOf('.') + 1).toUpperCase();
        char delimiterChar = containerForm.getModelObject().getUpload().getDelimiterType()
                .getDelimiterCharacter();
        InputStream inputStream = containerForm.getModelObject().getFileUpload().getInputStream();
        HashSet<Integer> insertRows = new HashSet<Integer>();
        HashSet<Integer> updateRows = new HashSet<Integer>();
        HashSet<ArkGridCell> errorCells = new HashSet<ArkGridCell>();

        //this is not the best way to do this fix TODO
        List<String> listOfUidsToUpdate = new ArrayList<String>(); //TODO remove hardcoding
        if (containerForm.getModelObject().getUpload().getUploadType().getName()
                .equalsIgnoreCase("Biospecimen Custom Data")) {
            BioCustomFieldUploadValidator customFieldUploadValidator = new BioCustomFieldUploadValidator(
                    iArkCommonService, iLimsService);
            validationMessages = customFieldUploadValidator
                    .validateBiospecimenCustomFieldFileData(containerForm.getModelObject(), listOfUidsToUpdate);
            containerForm.getModelObject().setUidsToUpload(listOfUidsToUpdate);
            insertRows = customFieldUploadValidator.getInsertRows();
            updateRows = customFieldUploadValidator.getUpdateRows();
            errorCells = customFieldUploadValidator.getErrorCells();
        } //TODO remove hardcoding
        else if (containerForm.getModelObject().getUpload().getUploadType().getName()
                .equalsIgnoreCase("Biocollection Custom Data")) {
            BioCustomFieldUploadValidator customFieldUploadValidator = new BioCustomFieldUploadValidator(
                    iArkCommonService, iLimsService);
            validationMessages = customFieldUploadValidator.validateBiocollectionCustomFieldFileData(
                    containerForm.getModelObject(), listOfUidsToUpdate);
            containerForm.getModelObject().setUidsToUpload(listOfUidsToUpdate);
            //TODO consider if we want alternative way to do this - and maybe a superclass of uploadvalidator which draws out commonalities
            insertRows = customFieldUploadValidator.getInsertRows();
            updateRows = customFieldUploadValidator.getUpdateRows();
            errorCells = customFieldUploadValidator.getErrorCells();

        } else {
            //TODO : Throw error back to user
        }

        this.containerForm.getModelObject().setValidationMessages(validationMessages);
        validationMessage = containerForm.getModelObject().getValidationMessagesAsString();
        addOrReplace(new MultiLineLabel("multiLineLabel", validationMessage));

        // Show file data (and key reference)
        ArkExcelWorkSheetAsGrid arkExcelWorkSheetAsGrid = new ArkExcelWorkSheetAsGrid("gridView", inputStream,
                fileFormat, delimiterChar, containerForm.getModelObject().getFileUpload(), insertRows,
                updateRows, errorCells, containerForm.getModelObject().getUpload().getUploadType());
        arkExcelWorkSheetAsGrid.setOutputMarkupId(true);
        arkExcelWorkSheetAsGrid.getWizardDataGridKeyContainer().setVisible(true);
        form.setArkExcelWorkSheetAsGrid(arkExcelWorkSheetAsGrid);
        form.getWizardPanelFormContainer().addOrReplace(arkExcelWorkSheetAsGrid);

        // Repaint
        target.add(arkExcelWorkSheetAsGrid.getWizardDataGridKeyContainer());
        target.add(form.getWizardPanelFormContainer());
        //TODO remove hardcoding
        if (updateRows.isEmpty() || containerForm.getModelObject().getUpload().getUploadType().getName()
                .equalsIgnoreCase("Study-specific (custom) Data")) {
            updateExistingDataContainer.setVisible(false);
            target.add(updateExistingDataContainer);
        }

        if (!errorCells.isEmpty()) {
            updateExistingDataContainer.setVisible(false);
            target.add(updateExistingDataContainer);
            form.getNextButton().setEnabled(false);
            target.add(form.getWizardButtonContainer());
        }
    } catch (IOException e) {
        validationMessage = "Error attempting to display the file. Please check the file and try again.";
        addOrReplace(new MultiLineLabel("multiLineLabel", validationMessage));
    }

    containerForm.getModelObject().setValidationMessages(validationMessages);
    validationMessage = containerForm.getModelObject().getValidationMessagesAsString();
    addOrReplace(new MultiLineLabel("multiLineLabel", validationMessage));

    if (validationMessage != null && validationMessage.length() > 0) {
        form.getNextButton().setEnabled(false);
        target.add(form.getWizardButtonContainer());
        downloadValMsgButton = new ArkDownloadAjaxButton("downloadValMsg", "ValidationMessage",
                validationMessage, "txt") {

            /**
             * 
             */
            private static final long serialVersionUID = 343293022422099247L;

            @Override
            protected void onError(AjaxRequestTarget target, Form<?> form) {
                this.error("Unexpected Error: Download request could not be processed");
            }

        };
        addOrReplace(downloadValMsgButton);
        target.add(downloadValMsgButton);
    }
}

From source file:au.org.theark.lims.web.component.bioupload.BioUploadStep4.java

License:Open Source License

@Override
public void onStepOutNext(AbstractWizardForm<?> form, AjaxRequestTarget target) {
    form.getNextButton().setEnabled(false);
    target.add(form.getNextButton());
    // Filename seems to be lost from model when moving between steps in wizard?  is this a symptom of something greater?
    containerForm.getModelObject().getUpload().setFilename(wizardForm.getFileName());

    String fileFormat = containerForm.getModelObject().getUpload().getFileFormat().getName();
    char delimiterChar = containerForm.getModelObject().getUpload().getDelimiterType().getDelimiterCharacter();
    try {/*  w  ww . j  a  v a2 s  .c o m*/
        List<String> uidsToUpload = containerForm.getModelObject().getUidsToUpload();
        //log.info("________________________________________________________" + "about to try passing list of uids is of size " + uidsToUpload.size() );
        InputStream inputStream = containerForm.getModelObject().getFileUpload().getInputStream();
        long size = containerForm.getModelObject().getFileUpload().getSize();
        Long uploadId = containerForm.getModelObject().getUpload().getId();
        String report = generateInitialUploadReport();

        Subject currentUser = SecurityUtils.getSubject();
        Long studyId = (Long) currentUser.getSession()
                .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);

        if (containerForm.getModelObject().getUpload().getUploadType().getName()
                .equalsIgnoreCase("Subject Demographic Data")) {
            StudyDataUploadExecutor task = new StudyDataUploadExecutor(iArkCommonService, iLimsService,
                    inputStream, uploadId, //null user
                    studyId, fileFormat, delimiterChar, size, report, uidsToUpload);
            task.run();
        } else if (containerForm.getModelObject().getUpload().getUploadType().getName()
                .equalsIgnoreCase("Study-specific (custom) Data")) {
            BioSpecimenCustomDataUploadExecutor task = new BioSpecimenCustomDataUploadExecutor(
                    iArkCommonService, iLimsService, inputStream, uploadId, //null user
                    studyId, fileFormat, delimiterChar, size, report, uidsToUpload);
            task.run();
        }

    } catch (Exception e1) {
        // TODO Auto-generated catch block
        e1.printStackTrace();
    }
}

From source file:au.org.theark.lims.web.component.bioupload.form.SearchForm.java

License:Open Source License

@Override
protected void onSearch(AjaxRequestTarget target) {
    target.add(feedbackPanel);

    Long studyId = (Long) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
    // Get a list of all Fields for the Study in context
    Study study = iArkCommonService.getStudy(studyId);
    Upload searchUpload = getModelObject().getUpload();
    searchUpload.setStudy(study);/* ww w  .java2s.  c om*/

    java.util.Collection<Upload> uploadCollection = iArkCommonService.searchUploads(searchUpload);

    if (uploadCollection != null && uploadCollection.size() == 0) {
        this.info("Uploads with the specified criteria does not exist in the system.");
        target.add(feedbackPanel);
    }

    getModelObject().setUploadCollection(uploadCollection);

    listView.removeAll();
    arkCrudContainerVO.getSearchResultPanelContainer().setVisible(true);// Make the WebMarkupContainer that houses the search results visible
    target.add(arkCrudContainerVO.getSearchResultPanelContainer());
}