Example usage for org.apache.wicket.ajax AjaxRequestTarget add

List of usage examples for org.apache.wicket.ajax AjaxRequestTarget add

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Introduction

In this page you can find the example usage for org.apache.wicket.ajax AjaxRequestTarget add.

Prototype

void add(Component... components);

Source Link

Document

Adds components to the list of components to be rendered.

Usage

From source file:au.org.theark.study.web.component.global.subject.SearchResultListPanel.java

License:Open Source License

private AjaxLink buildLink(final SubjectVO subject) {
    ArkBusyAjaxLink link = new ArkBusyAjaxLink(Constants.SUBJECT_UID) {
        @Override//ww w. j av  a  2 s  . c o  m
        public void onClick(AjaxRequestTarget target) {
            Long sessionStudyId = (Long) SecurityUtils.getSubject().getSession()
                    .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
            // subject.getLinkSubjectStudy().setStudy(iArkCommonService.getStudy(sessionStudyId));

            // We specify the type of person here as Subject
            SecurityUtils.getSubject().getSession().setAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID,
                    subject.getLinkSubjectStudy().getStudy().getId());
            SecurityUtils.getSubject().getSession().setAttribute(au.org.theark.core.Constants.PERSON_CONTEXT_ID,
                    subject.getLinkSubjectStudy().getPerson().getId());
            SecurityUtils.getSubject().getSession().setAttribute(au.org.theark.core.Constants.PERSON_TYPE,
                    au.org.theark.core.Constants.PERSON_CONTEXT_TYPE_SUBJECT);

            SubjectVO subjectFromBackend = new SubjectVO();
            Collection<SubjectVO> subjects = iArkCommonService.getSubject(subject);
            for (SubjectVO subjectVO2 : subjects) {
                subjectFromBackend = subjectVO2;
                break;
            }

            // Available/assigned child studies
            List<Study> availableChildStudies = new ArrayList<Study>(0);
            List<Study> selectedChildStudies = new ArrayList<Study>(0);

            if (subjectFromBackend.getLinkSubjectStudy().getStudy().getParentStudy() != null) {
                availableChildStudies = iStudyService
                        .getChildStudyListOfParent(subjectFromBackend.getLinkSubjectStudy().getStudy());
                selectedChildStudies = iArkCommonService.getAssignedChildStudyListForPerson(
                        subjectFromBackend.getLinkSubjectStudy().getStudy(),
                        subjectFromBackend.getLinkSubjectStudy().getPerson());
            }

            //            ArkCRUDHelper.preProcessDetailPanelOnSearchResults(target, arkCrudContainerVO);            
            subjectFromBackend.setStudyList(subjectContainerForm.getModelObject().getStudyList());
            subjectContainerForm.setModelObject(subjectFromBackend);
            subjectContainerForm.getModelObject().setAvailableChildStudies(availableChildStudies);
            subjectContainerForm.getModelObject().setSelectedChildStudies(selectedChildStudies);

            // Set SubjectUID into context
            SecurityUtils.getSubject().getSession().setAttribute(au.org.theark.core.Constants.SUBJECTUID,
                    subjectFromBackend.getLinkSubjectStudy().getSubjectUID());
            ContextHelper contextHelper = new ContextHelper();
            contextHelper.setStudyContextLabel(target,
                    subjectFromBackend.getLinkSubjectStudy().getStudy().getName(), arkContextMarkup);
            contextHelper.setSubjectContextLabel(target,
                    subjectFromBackend.getLinkSubjectStudy().getSubjectUID(), arkContextMarkup);

            // Set Study Logo
            StudyHelper studyHelper = new StudyHelper();
            studyHelper.setStudyLogo(subjectFromBackend.getLinkSubjectStudy().getStudy(), target,
                    studyNameMarkup, studyLogoMarkup);

            //Move to subject Tab
            ListIterator<ITab> lIter = mainTabs.getTabs().listIterator();
            while (lIter.hasNext()) {
                int index = lIter.nextIndex();
                ITab currentTab = lIter.next();
                System.out.println("TAB: " + currentTab.getTitle().toString());
                if (currentTab.getTitle().getObject() == au.org.theark.core.Constants.ARK_MODULE_SUBJECT) {
                    mainTabs.setSelectedTab(index);
                    break;
                }
            }
            target.add(mainTabs);
        }
    };
    Label nameLinkLabel = new Label(Constants.SUBJECT_KEY_LBL, subject.getLinkSubjectStudy().getSubjectUID());
    link.add(nameLinkLabel);
    return link;
}

From source file:au.org.theark.study.web.component.global.subject.SearchResultListPanel.java

License:Open Source License

/**After select a parent validate the pedigree for circular relationships and create new parent relationship in database.
 * @param subject//from w w  w . j  a  v  a 2 s.co  m
 * @param modalWindow
 * @param relatives
 * @param feedbackPanel
 * @param target
 */
private void processParentSelection(final SubjectVO subject, final AbstractDetailModalWindow modalWindow,
        final List<RelationshipVo> relatives, final FeedbackPanel feedbackPanel, AjaxRequestTarget target) {
    LinkSubjectPedigree pedigreeRelationship = new LinkSubjectPedigree();

    Long sessionStudyId = (Long) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);

    Study study = iArkCommonService.getStudy(sessionStudyId);

    String subjectUID = (String) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.SUBJECTUID);

    String parentUID = subject.getLinkSubjectStudy().getSubjectUID();

    // Circular validation
    StringBuilder pedigree = new StringBuilder();
    ArrayList<String> dummyParents = new ArrayList<String>();
    boolean firstLine = true;

    List<RelationshipVo> existingRelatives = new ArrayList<RelationshipVo>();
    existingRelatives.addAll(relatives);

    RelationshipVo proband = new RelationshipVo();
    proband.setIndividualId(subjectUID);
    for (RelationshipVo relative : existingRelatives) {
        if ("Father".equalsIgnoreCase(relative.getRelationship())) {
            proband.setFatherId(relative.getIndividualId());
        }

        if ("Mother".equalsIgnoreCase(relative.getRelationship())) {
            proband.setMotherId(relative.getIndividualId());
        }
    }

    if (subject.getLinkSubjectStudy().getPerson().getGenderType().getName().startsWith("M")) {
        proband.setFatherId(parentUID);
    } else if (subject.getLinkSubjectStudy().getPerson().getGenderType().getName().startsWith("F")) {
        proband.setMotherId(parentUID);
    }
    existingRelatives.add(proband);

    List<RelationshipVo> newRelatives = iStudyService.generateSubjectPedigreeRelativeList(parentUID,
            sessionStudyId);

    RelationshipVo parent = new RelationshipVo();
    parent.setIndividualId(parentUID);
    for (RelationshipVo relative : newRelatives) {
        if ("Father".equalsIgnoreCase(relative.getRelationship())) {
            parent.setFatherId(relative.getIndividualId());
        }

        if ("Mother".equalsIgnoreCase(relative.getRelationship())) {
            parent.setMotherId(relative.getIndividualId());
        }
    }

    newRelatives.add(parent);

    for (RelationshipVo relative : newRelatives) {
        if (!existingRelatives.contains(relative)) {
            existingRelatives.add(relative);
        } else {
            for (RelationshipVo existingRelative : existingRelatives) {
                if (relative.getIndividualId().equals(existingRelative.getIndividualId())) {
                    if (existingRelative.getFatherId() == null) {
                        existingRelative.setFatherId(relative.getFatherId());
                    }
                    if (existingRelative.getMotherId() == null) {
                        existingRelative.setMotherId(relative.getMotherId());
                    }
                }
            }
        }
    }

    for (RelationshipVo relative : existingRelatives) {
        String dummyParent = "D-";
        String father = relative.getFatherId();
        String mother = relative.getMotherId();
        String individual = relative.getIndividualId();

        if (father != null) {
            dummyParent = dummyParent + father;
        }

        if (mother != null) {
            dummyParent = dummyParent + mother;
        }

        if (!"D-".equals(dummyParent) && !dummyParents.contains(dummyParent)) {
            dummyParents.add(dummyParent);
            if (father != null) {
                if (firstLine) {
                    pedigree.append(father + " " + dummyParent);
                    firstLine = false;
                } else {
                    pedigree.append("\n" + father + " " + dummyParent);
                }
            }
            if (mother != null) {
                if (firstLine) {
                    pedigree.append(mother + " " + dummyParent);
                    firstLine = false;
                } else {
                    pedigree.append("\n" + mother + " " + dummyParent);
                }
            }
            pedigree.append("\n" + dummyParent + " " + individual);
        } else if (!"D-".equals(dummyParent)) {
            if (firstLine) {
                pedigree.append(dummyParent + " " + individual);
                firstLine = false;
            } else {
                pedigree.append("\n" + dummyParent + " " + individual);
            }
        }
    }

    //TODO comment this block to disable circular validations for inbred relatives
    Set<String> circularUIDs = PedigreeUploadValidator.getCircularUIDs(pedigree);
    if (circularUIDs.size() > 0) {
        this.error("Performing this action will create a circular relationship in the pedigree.");
        StringBuffer sb = new StringBuffer(
                "The proposed action will cause a pedigree cycle involving subjects with UID:");
        boolean first = true;
        for (String uid : circularUIDs) {
            if (first) {
                sb.append(uid);
                first = false;
            } else {
                sb.append(", " + uid);
            }
        }
        sb.append(".");
        this.error(sb.toString());
        target.add(feedbackPanel);
        return;
    }

    // Assign new parent relationships

    SubjectVO criteriaSubjectVo = new SubjectVO();
    criteriaSubjectVo.getLinkSubjectStudy().setStudy(study);
    criteriaSubjectVo.getLinkSubjectStudy().setSubjectUID(subjectUID);
    Collection<SubjectVO> subjects = iArkCommonService.getSubject(criteriaSubjectVo);
    SubjectVO subjectVo = subjects.iterator().next();
    pedigreeRelationship.setSubject(subjectVo.getLinkSubjectStudy());

    criteriaSubjectVo.getLinkSubjectStudy().setSubjectUID(parentUID);
    subjects = iArkCommonService.getSubject(criteriaSubjectVo);
    subjectVo = subjects.iterator().next();
    pedigreeRelationship.setRelative(subjectVo.getLinkSubjectStudy());

    String gender = subject.getLinkSubjectStudy().getPerson().getGenderType().getName();

    List<Relationship> relationships = iArkCommonService.getFamilyRelationships();
    for (Relationship relationship : relationships) {
        if ("Male".equalsIgnoreCase(gender) && "Father".equalsIgnoreCase(relationship.getName())) {
            pedigreeRelationship.setRelationship(relationship);
            break;
        }

        if ("Female".equalsIgnoreCase(gender) && "Mother".equalsIgnoreCase(relationship.getName())) {
            pedigreeRelationship.setRelationship(relationship);
            break;
        }
    }

    iStudyService.create(pedigreeRelationship);
    modalWindow.close(target);
}

From source file:au.org.theark.study.web.component.global.subject.SubjectContainerPanel.java

License:Open Source License

@SuppressWarnings("unchecked")
protected WebMarkupContainer initialiseSearchResults(AbstractDetailModalWindow modalWindow, final String gender,
        final List<RelationshipVo> relatives) {
    searchResultsPanel = new SearchResultListPanel("searchResults", arkContextMarkup, containerForm,
            arkCrudContainerVO, studyNameMarkup, studyLogoMarkup, mainTabs);
    searchResultsPanel.setOutputMarkupId(true);

    if (sessionStudyId != null) {
        LinkSubjectStudy linkSubjectStudy = new LinkSubjectStudy();
        linkSubjectStudy.setStudy(study);
        //containerForm.getModelObject().setLinkSubjectStudy(linkSubjectStudy);
    }//from w w  w .ja v  a2  s  .com

    // Data providor to paginate resultList
    subjectProvider = new ArkDataProvider<SubjectVO, IArkCommonService>(iArkCommonService) {

        private static final long serialVersionUID = 1L;

        private GenderType genderType;

        {
            Collection<GenderType> genderTypes = service.getGenderTypes();
            for (GenderType type : genderTypes) {
                if (gender.equalsIgnoreCase(type.getName())) {
                    this.genderType = type;
                    break;
                }
            }
        }

        public int size() {
            String subjectUID = (String) SecurityUtils.getSubject().getSession()
                    .getAttribute(au.org.theark.core.Constants.SUBJECTUID);
            model.getObject().getRelativeUIDs().add(subjectUID);
            //TODO comment this block to check inbred relatives
            for (RelationshipVo relationshipVo : relatives) {
                model.getObject().getRelativeUIDs().add(relationshipVo.getIndividualId());
            }
            model.getObject().getLinkSubjectStudy().getPerson().setGenderType(genderType);
            return (int) service.getStudySubjectCount(model.getObject());
        }

        public Iterator<SubjectVO> iterator(int first, int count) {
            List<SubjectVO> listSubjects = new ArrayList<SubjectVO>();
            if (isActionPermitted()) {
                model.getObject().getLinkSubjectStudy().getPerson().setGenderType(genderType);
                String subjectUID = (String) SecurityUtils.getSubject().getSession()
                        .getAttribute(au.org.theark.core.Constants.SUBJECTUID);
                model.getObject().getRelativeUIDs().add(subjectUID);
                //TODO comment this block to check inbred relatives
                for (RelationshipVo relationshipVo : relatives) {
                    model.getObject().getRelativeUIDs().add(relationshipVo.getIndividualId());
                }
                listSubjects = iArkCommonService.searchPageableSubjects(model.getObject(), first, count);
            }
            return listSubjects.iterator();
        }
    };
    subjectProvider.setModel(this.cpModel);

    dataView = searchResultsPanel.buildDataView(subjectProvider, modalWindow, relatives, feedBackPanel);
    dataView.setItemsPerPage(
            iArkCommonService.getUserConfig(au.org.theark.core.Constants.CONFIG_ROWS_PER_PAGE).getIntValue());

    AjaxPagingNavigator pageNavigator = new AjaxPagingNavigator("navigator", dataView) {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onAjaxEvent(AjaxRequestTarget target) {
            target.add(searchResultsPanel);
        }
    };
    resultsWmc.add(pageNavigator);

    List<IColumn<SubjectVO>> columns = new ArrayList<IColumn<SubjectVO>>();
    columns.add(new ExportableTextColumn<SubjectVO>(Model.of("SubjectUID"), "subjectUID"));
    columns.add(new ExportableTextColumn<SubjectVO>(Model.of("Study"), "linkSubjectStudy.study.name"));
    columns.add(new ExportableTextColumn<SubjectVO>(Model.of("Full Name"), "subjectFullName"));
    columns.add(new ExportableTextColumn<SubjectVO>(Model.of("Last Name History"),
            "linkSubjectStudy.person.descriptiveLastNameHistory"));
    columns.add(new ExportableDateColumn<SubjectVO>(Model.of("Date Of Birth"),
            "linkSubjectStudy.person.dateOfBirth", au.org.theark.core.Constants.DD_MM_YYYY));
    columns.add(new ExportableTextColumn<SubjectVO>(Model.of("Vital Status"),
            "linkSubjectStudy.person.vitalStatus.name"));
    columns.add(
            new ExportableTextColumn<SubjectVO>(Model.of("Gender"), "linkSubjectStudy.person.genderType.name"));
    columns.add(new ExportableTextColumn<SubjectVO>(Model.of("Subject Status"),
            "linkSubjectStudy.subjectStatus.name"));
    columns.add(new ExportableTextColumn<SubjectVO>(Model.of("Consent Status"),
            "linkSubjectStudy.consentStatus.name"));
    columns.add(new ExportableTextColumn<SubjectVO>(Model.of("Other IDs"),
            "linkSubjectStudy.person.descriptiveOtherIDs"));

    DataTable table = new DataTable("datatable", columns, dataView.getDataProvider(),
            iArkCommonService.getUserConfig(au.org.theark.core.Constants.CONFIG_ROWS_PER_PAGE).getIntValue());
    List<String> headers = new ArrayList<String>(0);
    headers.add("SubjectUID");
    headers.add("Study");
    headers.add("Full Name");
    headers.add("Last Name History");
    headers.add("Date of Birth");
    headers.add("Vital Status");
    headers.add("Gender");
    headers.add("Subject Status");
    headers.add("Consent Status");
    headers.add("Other IDs");
    String filename = "subjects";
    RepeatingView toolbars = new RepeatingView("toolbars");
    ExportToolbar<String> exportToolBar = new ExportToolbar<String>(table, headers, filename);
    toolbars.add(new Component[] { exportToolBar });
    resultsWmc.add(toolbars);

    resultsWmc.add(dataView);
    searchResultsPanel.add(resultsWmc);
    arkCrudContainerVO.getSearchResultPanelContainer().add(searchResultsPanel);
    return arkCrudContainerVO.getSearchResultPanelContainer();
}

From source file:au.org.theark.study.web.component.managestudy.form.DetailForm.java

License:Open Source License

public void initialiseDetailForm() {
    studySummaryLabel = new Label("studySummaryLabel");
    studySummaryLabel.setOutputMarkupId(true);
    totalSubjectsLabel = new Label("totalSubjectsLabel");
    totalSubjectsLabel.setOutputMarkupId(true);

    studyIdTxtFld = new TextField<String>(Constants.STUDY_ID);
    studyIdTxtFld.setEnabled(false);//from ww w .  j  a  v a2 s.  c  o m

    studyNameTxtFld = new TextField<String>(Constants.STUDY_NAME);
    studyNameTxtFld.setRequired(true);
    studyNameTxtFld.add(new ArkDefaultFormFocusBehavior());

    studyDescriptionTxtArea = new TextArea<String>(Constants.STUDY_DESCRIPTION);
    estYearOfCompletionTxtFld = new TextField<String>(Constants.STUDY_ESTIMATED_YEAR_OF_COMPLETION);
    principalContactTxtFld = new TextField<String>(Constants.STUDY_CONTACT_PERSON);
    principalContactPhoneTxtFld = new TextField<String>(Constants.STUDY_CONTACT_PERSON_PHONE);
    chiefInvestigatorTxtFld = new TextField<String>(Constants.STUDY_CHIEF_INVESTIGATOR);
    coInvestigatorTxtFld = new TextField<String>(Constants.STUDY_CO_INVESTIGATOR);

    // Container for SubjectUID auto-generation yes/no
    autoSubjectUidContainer = new WebMarkupContainer("autoSubjectUidContainer");
    autoSubjectUidContainer.setOutputMarkupPlaceholderTag(true);

    autoBiospecimenUidContainer = new WebMarkupContainer("autoBiospecimenUidContainer");
    autoBiospecimenUidContainer.setOutputMarkupPlaceholderTag(true);

    autoBiocollectionUidContainer = new WebMarkupContainer("autoBiocollectionUidContainer");
    autoBiocollectionUidContainer.setOutputMarkupPlaceholderTag(true);

    // Create new DateTextField and assign date format
    dateOfApplicationDp = new DateTextField(Constants.STUDY_SEARCH_DOA,
            au.org.theark.core.Constants.DD_MM_YYYY);
    ArkDatePicker datePicker = new ArkDatePicker();
    datePicker.bind(dateOfApplicationDp);
    dateOfApplicationDp.add(datePicker);

    CompoundPropertyModel<StudyModelVO> studyCmpModel = (CompoundPropertyModel<StudyModelVO>) containerForm
            .getModel(); // details.getCpm();
    initStudyStatusDropDown(studyCmpModel);

    autoGenSubIdChkBox = new CheckBox(Constants.STUDY_AUTO_GENERATE_SUBJECTUID);
    autoGenSubIdChkBox.setVisible(true);
    autoGenSubIdChkBox.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            // Check what was selected and then toggle
            boolean autoGenerateSubjectUId = containerForm.getModelObject().getStudy()
                    .getAutoGenerateSubjectUid();
            subjectUidContainer.setEnabled(false);

            if (autoGenerateSubjectUId) {
                subjectUidContainer.setEnabled(true);
            }
            target.add(subjectUidContainer);
        }
    });
    autoGenSubIdChkBox.setOutputMarkupId(true);

    autoGenBiocollectionIdChkBox = new CheckBox(Constants.STUDY_AUTO_GENERATE_BIOCOLLECTIONUID);
    autoGenBiocollectionIdChkBox.setVisible(true);
    autoGenBiocollectionIdChkBox.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            // Check what was selected and then toggle
            boolean autoGenerateBiocollectionUId = containerForm.getModelObject().getStudy()
                    .getAutoGenerateBiocollectionUid();
            bioCollectionUidContainer.setEnabled(false);

            if (autoGenerateBiocollectionUId) {
                bioCollectionUidContainer.setEnabled(true);
            }
            target.add(bioCollectionUidContainer);
        }
    });
    autoGenBiocollectionIdChkBox.setOutputMarkupId(true);

    autoGenBiospecimenIdChkBox = new CheckBox(Constants.STUDY_AUTO_GENERATE_BIOSPECIMENUID);
    autoGenBiospecimenIdChkBox.setVisible(true);
    autoGenBiospecimenIdChkBox.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            // Check what was selected and then toggle
            boolean autoGenerateBiospecimenUId = containerForm.getModelObject().getStudy()
                    .getAutoGenerateBiospecimenUid();
            biospecimenUidContainer.setEnabled(false);

            if (autoGenerateBiospecimenUId) {
                biospecimenUidContainer.setEnabled(true);
            }
            target.add(biospecimenUidContainer);
        }
    });
    autoGenBiospecimenIdChkBox.setOutputMarkupId(true);

    autoConsentChkBox = new CheckBox(Constants.STUDY_AUTO_CONSENT);
    autoConsentChkBox.setVisible(true);

    studyCrudVO.setStudyLogoUploadContainer(new WebMarkupContainer("studyLogoUploadContainer"));
    studyCrudVO.getStudyLogoUploadContainer().setOutputMarkupPlaceholderTag(true);

    // fileUpload for logo
    fileUploadField = new FileUploadField(Constants.STUDY_FILENAME);
    clearLogoButton = new AjaxButton("clearLogoButton") {
        private static final long serialVersionUID = 1L;

        @Override
        protected void onSubmit(AjaxRequestTarget target, Form<?> form) {
            fileUploadField.clearInput();
            target.add(fileUploadField);
        }

        @Override
        protected void onError(AjaxRequestTarget target, Form<?> form) {
            fileUploadField.clearInput();
            target.add(fileUploadField);
        }
    };
    clearLogoButton.add(new AttributeModifier("title", new Model<String>("Clear Attachment")));
    studyCrudVO.getStudyLogoUploadContainer().add(fileUploadField);
    studyCrudVO.getStudyLogoUploadContainer().add(clearLogoButton);

    initStudyLogo();

    initSubjectUid();
    initBioCollectionUid();
    initBiospecimenUid();
    initParentStudyDdc();

    initArkModulePalette();

    initSubjectFileUpload();

    newChildStudyButton = new ArkBusyAjaxButton("newChildStudy") {

        private static final long serialVersionUID = 1666656098281624401L;

        @Override
        protected void onSubmit(AjaxRequestTarget target, Form<?> form) {
            // Make the details panel visible, disabling delete button (if found)
            // AjaxButton ajaxButton = (AjaxButton) editButtonContainer.get("delete");
            AjaxButton ajaxButton = (AjaxButton) studyCrudVO.getEditButtonContainer().get("delete");
            if (ajaxButton != null) {
                ajaxButton.setEnabled(false);
                target.add(ajaxButton);
            }

            StudyModelVO newVo = new StudyModelVO();
            Study study = newVo.getStudy();
            Study parentStudy = containerForm.getModelObject().getStudy();

            study.setId(null);
            study.setDescription("Child study of " + parentStudy.getName());
            study.setParentStudy(parentStudy);
            study.setName(null);

            // Modules of parent
            Collection<ArkModule> availableArkModules = containerForm.getModelObject().getAvailableArkModules();
            newVo.setAvailableArkModules(availableArkModules);

            Collection<ArkModule> selectedArkModules = containerForm.getModelObject().getSelectedArkModules();
            newVo.setSelectedArkModules(selectedArkModules);

            // Set auto-generated patterns to that of the parent study
            study.setAutoGenerateSubjectUid(parentStudy.getAutoGenerateSubjectUid());
            study.setSubjectUidPrefix(parentStudy.getSubjectUidPrefix());
            study.setSubjectUidToken(parentStudy.getSubjectUidToken());
            study.setSubjectUidPadChar(parentStudy.getSubjectUidPadChar());
            study.setSubjectUidStart(parentStudy.getSubjectUidStart());
            subjectUidExampleTxt = iArkCommonService.getSubjectUidExample(parentStudy);

            // Set BioCollection template
            BioCollectionUidTemplate parentBioCollectionUidTemplate = iArkCommonService
                    .getBioCollectionUidTemplate(parentStudy);
            if (parentBioCollectionUidTemplate != null) {
                BioCollectionUidTemplate bioCollectionUidTemplate = new BioCollectionUidTemplate();
                bioCollectionUidTemplate
                        .setBioCollectionUidPrefix(parentBioCollectionUidTemplate.getBioCollectionUidPrefix());
                bioCollectionUidTemplate
                        .setBioCollectionUidToken(parentBioCollectionUidTemplate.getBioCollectionUidToken());
                bioCollectionUidTemplate.setBioCollectionUidPadChar(
                        parentBioCollectionUidTemplate.getBioCollectionUidPadChar());
                bioCollectionUidTemplate.setStudy(study);
                containerForm.getModelObject().setBioCollectionUidTemplate(bioCollectionUidTemplate);
                bioCollectionUidExampleTxt = getBiocollectionUidExample();
            } else {
                containerForm.getModelObject().setBioCollectionUidTemplate(new BioCollectionUidTemplate());
                initBioCollectionUid();
            }

            // Set Biospecimen template
            BiospecimenUidTemplate parentBiospecimenUidTemplate = iArkCommonService
                    .getBiospecimenUidTemplate(parentStudy);
            if (parentBiospecimenUidTemplate != null) {
                BiospecimenUidTemplate biospecimenUidTemplate = new BiospecimenUidTemplate();
                biospecimenUidTemplate
                        .setBiospecimenUidPrefix(parentBiospecimenUidTemplate.getBiospecimenUidPrefix());
                biospecimenUidTemplate
                        .setBiospecimenUidToken(parentBiospecimenUidTemplate.getBiospecimenUidToken());
                biospecimenUidTemplate
                        .setBiospecimenUidPadChar(parentBiospecimenUidTemplate.getBiospecimenUidPadChar());
                biospecimenUidTemplate.setStudy(study);
                containerForm.getModelObject().setBiospecimenUidTemplate(biospecimenUidTemplate);
                biospecimenUidExampleTxt = getBiospecimenUidExample();
            } else {
                containerForm.getModelObject().setBiospecimenUidTemplate(new BiospecimenUidTemplate());
                initBiospecimenUid();
            }

            study.setAutoGenerateBiocollectionUid(parentStudy.getAutoGenerateBiocollectionUid());
            study.setAutoGenerateBiospecimenUid(parentStudy.getAutoGenerateBiospecimenUid());

            autoGenSubIdChkBox.setEnabled(false);
            autoGenBiocollectionIdChkBox.setEnabled(false);
            autoGenBiospecimenIdChkBox.setEnabled(false);
            subjectUidContainer.setEnabled(false);
            biospecimenUidContainer.setEnabled(false);
            bioCollectionUidContainer.setEnabled(false);

            containerForm.setDefaultModelObject(newVo);
            target.add(studyCrudVO.getDetailPanelFormContainer());

            // Hide Summary details on new
            studyCrudVO.getSummaryContainer().setVisible(false);
            target.add(studyCrudVO.getSummaryContainer());

            getAutoSubjectUidContainer().setEnabled(false);
            getAutoBiocollectionUidContainer().setEnabled(false);
            getAutoBiospecimenUidContainer().setEnabled(false);
            getSubjectUidContainer().setEnabled(false);
            //            bioCollectionUidContainer.setEnabled(false);
            //            biospecimenUidContainer.setEnabled(false);

            target.add(getAutoSubjectUidContainer());
            target.add(getAutoBiocollectionUidContainer());
            target.add(getAutoBiospecimenUidContainer());

            target.add(getSubjectUidContainer());
            target.add(bioCollectionUidContainer);
            target.add(biospecimenUidContainer);

            // hide new child study button
            this.setVisible(false);
            target.add(this);
        }

        @Override
        public boolean isVisible() {
            Study study = null;
            Study parentStudy = null;

            if (containerForm.getModelObject().getStudy() != null) {
                study = containerForm.getModelObject().getStudy();
                parentStudy = containerForm.getModelObject().getStudy().getParentStudy();
            }

            return (ArkPermissionHelper.isActionPermitted(Constants.NEW) && !isNew()
                    && (parentStudy == null || study == parentStudy));
        }

        @Override
        protected void onError(final AjaxRequestTarget target, Form<?> form) {
            target.add(feedBackPanel);
        }
    };

    historyButtonPanel = new HistoryButtonPanel(containerForm, studyCrudVO.getEditButtonContainer(),
            studyCrudVO.getDetailPanelFormContainer());

    attachValidators();
    addComponents();
}

From source file:au.org.theark.study.web.component.managestudy.form.DetailForm.java

License:Open Source License

private void initSubjectUid() {
    // Container for SubjectUID auto-generation details
    subjectUidContainer = new WebMarkupContainer("subjectUidContainer");
    subjectUidContainer.setOutputMarkupPlaceholderTag(true);

    // Label showing example auto-generated Subject UIDs
    subjectUidExampleTxt = iArkCommonService.getSubjectUidExample(containerForm.getModelObject().getStudy());
    if (subjectUidExampleTxt == null || subjectUidExampleTxt.length() == 0) {
        subjectUidExampleTxt = Constants.SUBJECTUID_EXAMPLE;
    }//from  w ww  .j  a v a  2 s.c  o  m

    subjectUidExampleLbl = new Label("study.subjectUid.example",
            new PropertyModel<String>(this, "subjectUidExampleTxt"));
    subjectUidExampleLbl.setOutputMarkupId(true);
    subjectUidExampleLbl.setDefaultModelObject(containerForm.getModelObject().getSubjectUidExample());
    subjectUidExampleLbl.setVisible(true);

    // Subject UID prefix (e.g. three char representation of the Study name
    subjectUidPrefixTxtFld = new TextField<String>(au.org.theark.study.web.Constants.SUBJECT_UID_PREFIX);
    subjectUidPrefixTxtFld.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            subjectUidExampleTxt = getSubjectUidExample();
            target.add(subjectUidExampleLbl);
        }
    });

    // Token to separate the string (e.g. "-")
    subjectUidTokenTxtFld = new TextField<String>("subjectUidToken");
    subjectUidTokenTxtFld.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            subjectUidExampleTxt = getSubjectUidExample();
            target.add(subjectUidExampleLbl);
        }
    });
    subjectUidTokenTxtFld.setVisible(false);

    // Token selection
    initSubjectUidTokenDropDown();

    // How many padded chars in SubjectUID incrementor
    initSubjectUidPadCharsDropDown();

    // If the Study wishes to start the incrementor at a particular value
    subjectUidStartTxtFld = new TextField<Integer>(au.org.theark.study.web.Constants.SUBJECT_UID_START,
            Integer.class);
    subjectUidStartTxtFld.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            subjectUidExampleTxt = getSubjectUidExample();
            target.add(subjectUidExampleLbl);
        }
    });
}

From source file:au.org.theark.study.web.component.managestudy.form.DetailForm.java

License:Open Source License

private void initBioCollectionUid() {
    /* BioCollection UID Container and related controls */
    bioCollectionUidContainer = new WebMarkupContainer("bioCollectionUidContainer");
    bioCollectionUidContainer.setOutputMarkupPlaceholderTag(true);

    // Label showing example auto-generated BioCollection UIDs
    bioCollectionUidExampleTxt = getBiocollectionUidExample();
    if (bioCollectionUidExampleTxt == null || bioCollectionUidExampleTxt.length() == 0) {
        bioCollectionUidExampleTxt = Constants.BIOCOLLECTIONUID_EXAMPLE;
    }//from   ww w .j  av a 2  s. c om

    bioCollectionUidPrefixTxtFld = new TextField<String>("bioCollectionUidTemplate.bioCollectionUidPrefix");
    bioCollectionUidPrefixTxtFld.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            bioCollectionUidExampleTxt = getBiocollectionUidExample();
            target.add(bioCollectionUidExampleLbl);
        }
    });

    initBioCollectionUidTokenDropDown();
    initBioCollectionUidPadCharDdc();

    bioCollectionUidExampleLbl = new Label("study.bioCollectionUid.example",
            new PropertyModel<String>(this, "bioCollectionUidExampleTxt"));
    bioCollectionUidExampleLbl.setOutputMarkupId(true);
    bioCollectionUidExampleLbl
            .setDefaultModelObject(containerForm.getModelObject().getBioCollectionUidExample());
    bioCollectionUidExampleLbl.setVisible(true);
}

From source file:au.org.theark.study.web.component.managestudy.form.DetailForm.java

License:Open Source License

private void initBioCollectionUidTokenDropDown() {
    List<BioCollectionUidToken> bioCollectionUidToken = iArkCommonService.getBioCollectionUidToken();
    ChoiceRenderer<BioCollectionUidToken> choiceRenderer = new ChoiceRenderer<BioCollectionUidToken>(
            Constants.NAME, Constants.ID);
    bioCollectionUidTokenDdc = new DropDownChoice<BioCollectionUidToken>(
            "bioCollectionUidTemplate.bioCollectionUidToken", bioCollectionUidToken, choiceRenderer);

    bioCollectionUidTokenDdc.add(new AjaxFormComponentUpdatingBehavior("onChange") {
        private static final long serialVersionUID = 1L;

        @Override//  ww w . j av a  2s  .  c  o  m
        protected void onUpdate(AjaxRequestTarget target) {

            bioCollectionUidExampleTxt = getBiocollectionUidExample();
            target.add(bioCollectionUidExampleLbl);
        }
    });
}

From source file:au.org.theark.study.web.component.managestudy.form.DetailForm.java

License:Open Source License

private void initBioCollectionUidPadCharDdc() {
    List<BioCollectionUidPadChar> bioCollectionUidPadChar = new ArrayList<BioCollectionUidPadChar>(0);
    bioCollectionUidPadChar = iArkCommonService.getBioCollectionUidPadChar();
    ChoiceRenderer<BioCollectionUidPadChar> choiceRenderer = new ChoiceRenderer<BioCollectionUidPadChar>(
            Constants.NAME, Constants.ID);
    bioCollectionUidPadCharDdc = new DropDownChoice<BioCollectionUidPadChar>(
            "bioCollectionUidTemplate.bioCollectionUidPadChar", bioCollectionUidPadChar, choiceRenderer);

    bioCollectionUidPadCharDdc.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override/*from  w  ww.ja v  a2s .co m*/
        protected void onUpdate(AjaxRequestTarget target) {
            bioCollectionUidExampleTxt = getBiocollectionUidExample();
            target.add(bioCollectionUidExampleLbl);
        }
    });
}

From source file:au.org.theark.study.web.component.managestudy.form.DetailForm.java

License:Open Source License

private void initBiospecimenUid() {
    // Label showing example auto-generated Biospecimen UIDs
    biospecimenUidExampleTxt = getBiospecimenUidExample();
    if (bioCollectionUidExampleTxt == null || bioCollectionUidExampleTxt.length() == 0) {
        bioCollectionUidExampleTxt = Constants.BIOSPECIMENUID_EXAMPLE;
    }//www  . j a va  2 s .  com

    biospecimenUidContainer = new WebMarkupContainer("biospecimenUidContainer");
    biospecimenUidContainer.setOutputMarkupPlaceholderTag(true);
    biospecimenUidPrefixTxtFld = new TextField<String>("biospecimenUidTemplate.biospecimenUidPrefix");

    biospecimenUidPrefixTxtFld.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        protected void onUpdate(AjaxRequestTarget target) {
            biospecimenUidExampleTxt = getBiospecimenUidExample();
            target.add(biospecimenUidExampleLbl);
        }
    });

    // Token to separate the string (e.g. "-")
    biospecimentUidTokenTxtFld = new TextField<String>("biospecimenUidTemplate.biospecimenUidToken");
    biospecimentUidTokenTxtFld.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            biospecimenUidExampleTxt = getBiocollectionUidExample();
            target.add(biospecimenUidExampleLbl);
        }
    });

    biospecimenUidExampleLbl = new Label("biospecimenUid.example",
            new PropertyModel<String>(this, "biospecimenUidExampleTxt"));
    biospecimenUidExampleLbl.setOutputMarkupId(true);
    biospecimenUidExampleLbl.setVisible(true);

    initBiospecimenUidTokenDropDown();
    initBiospecimenUidPadCharDdc();
}

From source file:au.org.theark.study.web.component.managestudy.form.DetailForm.java

License:Open Source License

private void initBiospecimenUidTokenDropDown() {
    List<BiospecimenUidToken> biospecimenUidTokens = new ArrayList<BiospecimenUidToken>(0);
    biospecimenUidTokens = iArkCommonService.getBiospecimenUidTokens();
    ChoiceRenderer<BiospecimenUidToken> choiceRenderer = new ChoiceRenderer<BiospecimenUidToken>(Constants.NAME,
            Constants.ID);/*from w  w  w.  j a va  2  s.co  m*/
    biospecimenUidTokenDdc = new DropDownChoice<BiospecimenUidToken>(
            "biospecimenUidTemplate.biospecimenUidToken", biospecimenUidTokens, choiceRenderer);
    biospecimenUidTokenDdc.add(new AjaxFormComponentUpdatingBehavior("onChange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            biospecimenUidExampleTxt = getBiospecimenUidExample();
            target.add(biospecimenUidExampleLbl);
        }
    });
}