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Download imagej Free Java Code

Description

Image J2: the next generation version of Image J.

Icons

imagej

Source Files

The download file imagej-master.zip has the following entries.


.gitattributes// w  w w  .  j a v  a2  s . co m
.gitignore
.mailmap
INSTALL.txt
LICENSE.txt
NOTICE.txt
README.md
RELEASES.md
about/about1.tif
about/about1.tif.txt
about/about2.tif
about/about2.tif.txt
about/about3.tif
about/about3.tif.txt
about/about4.tif
about/about4.tif.txt
about/about5.tif
about/about5.tif.txt
app/.factorypath
app/.settings/org.eclipse.jdt.apt.core.prefs
app/LICENSE.txt
app/pom.xml
app/src/main/assembly/all.xml
app/src/main/assembly/all/META-INF/annotations/readme.txt
app/src/main/assembly/application.xml
app/src/main/assembly/application/Contents/Info.plist
app/src/main/assembly/application/Contents/PkgInfo
app/src/main/assembly/application/plugins/readme.txt
app/src/main/assembly/dir.xml
app/src/main/assembly/zip.xml
app/src/main/java/imagej/ImageJ.java
app/src/main/java/imagej/Main.java
app/src/test/java/imagej/debug/TypeHierarchy.java
bin/add-header.sh
bin/check-headers.pl
bin/eclipse-clue-bat.sh
bin/event-hierarchy.sh
bin/gen-component-tables.pl
bin/gen-graphs.sh
bin/gen-jar-with-deps.sh
bin/populate-app.sh
bin/subs.pl
bin/trac-mixed-milestones.pl
bin/trac-users.pl
bin/trigger-jenkins-deploy.sh
config/eclipse-code-clean-up-profile.xml
config/eclipse-code-formatter-profile.xml
config/eclipse-preferences.epf
core/LICENSE.txt
core/core/.factorypath
core/core/.settings/org.eclipse.jdt.apt.core.prefs
core/core/LICENSE.txt
core/core/pom.xml
core/core/src/main/java/imagej/Cancelable.java
core/core/src/main/java/imagej/Identifiable.java
core/core/src/main/java/imagej/Validated.java
core/core/src/main/java/imagej/ValidityProblem.java
core/core/src/main/java/imagej/app/ImageJApp.java
core/core/src/main/java/imagej/command/Command.java
core/core/src/main/java/imagej/command/CommandInfo.java
core/core/src/main/java/imagej/command/CommandModule.java
core/core/src/main/java/imagej/command/CommandModuleItem.java
core/core/src/main/java/imagej/command/CommandService.java
core/core/src/main/java/imagej/command/ContextCommand.java
core/core/src/main/java/imagej/command/DefaultCommandService.java
core/core/src/main/java/imagej/command/DynamicCommand.java
core/core/src/main/java/imagej/command/DynamicCommandInfo.java
core/core/src/main/java/imagej/command/Interactive.java
core/core/src/main/java/imagej/command/InteractiveCommand.java
core/core/src/main/java/imagej/command/ModuleCommand.java
core/core/src/main/java/imagej/command/Previewable.java
core/core/src/main/java/imagej/command/UnimplementedCommand.java
core/core/src/main/java/imagej/command/console/RunArgument.java
core/core/src/main/java/imagej/config/ConfigFileParameters.java
core/core/src/main/java/imagej/console/AbstractConsoleArgument.java
core/core/src/main/java/imagej/console/ConsoleArgument.java
core/core/src/main/java/imagej/console/ConsoleService.java
core/core/src/main/java/imagej/console/DefaultConsoleService.java
core/core/src/main/java/imagej/display/AbstractDisplay.java
core/core/src/main/java/imagej/display/ActiveDisplayPreprocessor.java
core/core/src/main/java/imagej/display/DefaultDisplay.java
core/core/src/main/java/imagej/display/DefaultDisplayService.java
core/core/src/main/java/imagej/display/DefaultTextDisplay.java
core/core/src/main/java/imagej/display/Display.java
core/core/src/main/java/imagej/display/DisplayPostprocessor.java
core/core/src/main/java/imagej/display/DisplayService.java
core/core/src/main/java/imagej/display/Displayable.java
core/core/src/main/java/imagej/display/TextDisplay.java
core/core/src/main/java/imagej/display/event/DisplayActivatedEvent.java
core/core/src/main/java/imagej/display/event/DisplayCreatedEvent.java
core/core/src/main/java/imagej/display/event/DisplayDeletedEvent.java
core/core/src/main/java/imagej/display/event/DisplayEvent.java
core/core/src/main/java/imagej/display/event/DisplayUpdatedEvent.java
core/core/src/main/java/imagej/display/event/input/InputEvent.java
core/core/src/main/java/imagej/display/event/input/KyEvent.java
core/core/src/main/java/imagej/display/event/input/KyPressedEvent.java
core/core/src/main/java/imagej/display/event/input/KyReleasedEvent.java
core/core/src/main/java/imagej/display/event/input/KyTypedEvent.java
core/core/src/main/java/imagej/display/event/input/MsButtonEvent.java
core/core/src/main/java/imagej/display/event/input/MsClickedEvent.java
core/core/src/main/java/imagej/display/event/input/MsDraggedEvent.java
core/core/src/main/java/imagej/display/event/input/MsEnteredEvent.java
core/core/src/main/java/imagej/display/event/input/MsEvent.java
core/core/src/main/java/imagej/display/event/input/MsExitedEvent.java
core/core/src/main/java/imagej/display/event/input/MsMovedEvent.java
core/core/src/main/java/imagej/display/event/input/MsPressedEvent.java
core/core/src/main/java/imagej/display/event/input/MsReleasedEvent.java
core/core/src/main/java/imagej/display/event/input/MsWheelEvent.java
core/core/src/main/java/imagej/display/event/window/WinActivatedEvent.java
core/core/src/main/java/imagej/display/event/window/WinClosedEvent.java
core/core/src/main/java/imagej/display/event/window/WinClosingEvent.java
core/core/src/main/java/imagej/display/event/window/WinDeactivatedEvent.java
core/core/src/main/java/imagej/display/event/window/WinDeiconifiedEvent.java
core/core/src/main/java/imagej/display/event/window/WinEvent.java
core/core/src/main/java/imagej/display/event/window/WinIconifiedEvent.java
core/core/src/main/java/imagej/display/event/window/WinOpenedEvent.java
core/core/src/main/java/imagej/io/AbstractIOPlugin.java
core/core/src/main/java/imagej/io/DefaultIOService.java
core/core/src/main/java/imagej/io/DefaultRecentFileService.java
core/core/src/main/java/imagej/io/IOPlugin.java
core/core/src/main/java/imagej/io/IOService.java
core/core/src/main/java/imagej/io/RecentFileService.java
core/core/src/main/java/imagej/io/event/DataOpenedEvent.java
core/core/src/main/java/imagej/io/event/DataSavedEvent.java
core/core/src/main/java/imagej/io/event/IOEvent.java
core/core/src/main/java/imagej/menu/AbstractMenuCreator.java
core/core/src/main/java/imagej/menu/DefaultMenuService.java
core/core/src/main/java/imagej/menu/MenuConstants.java
core/core/src/main/java/imagej/menu/MenuCreator.java
core/core/src/main/java/imagej/menu/MenuService.java
core/core/src/main/java/imagej/menu/ShadowMenu.java
core/core/src/main/java/imagej/menu/ShadowMenuIterator.java
core/core/src/main/java/imagej/menu/event/MenuEvent.java
core/core/src/main/java/imagej/menu/event/MenusAddedEvent.java
core/core/src/main/java/imagej/menu/event/MenusRemovedEvent.java
core/core/src/main/java/imagej/menu/event/MenusUpdatedEvent.java
core/core/src/main/java/imagej/module/AbstractModule.java
core/core/src/main/java/imagej/module/AbstractModuleInfo.java
core/core/src/main/java/imagej/module/AbstractModuleItem.java
core/core/src/main/java/imagej/module/DefaultModuleService.java
core/core/src/main/java/imagej/module/DefaultMutableModule.java
core/core/src/main/java/imagej/module/DefaultMutableModuleInfo.java
core/core/src/main/java/imagej/module/DefaultMutableModuleItem.java
core/core/src/main/java/imagej/module/MethodCallException.java
core/core/src/main/java/imagej/module/MethodRef.java
core/core/src/main/java/imagej/module/Module.java
core/core/src/main/java/imagej/module/ModuleCanceledException.java
core/core/src/main/java/imagej/module/ModuleException.java
core/core/src/main/java/imagej/module/ModuleIndex.java
core/core/src/main/java/imagej/module/ModuleInfo.java
core/core/src/main/java/imagej/module/ModuleItem.java
core/core/src/main/java/imagej/module/ModulePostprocessor.java
core/core/src/main/java/imagej/module/ModulePreprocessor.java
core/core/src/main/java/imagej/module/ModuleProcessor.java
core/core/src/main/java/imagej/module/ModuleRunner.java
core/core/src/main/java/imagej/module/ModuleService.java
core/core/src/main/java/imagej/module/MutableModule.java
core/core/src/main/java/imagej/module/MutableModuleInfo.java
core/core/src/main/java/imagej/module/MutableModuleItem.java
core/core/src/main/java/imagej/module/event/ModuleCanceledEvent.java
core/core/src/main/java/imagej/module/event/ModuleEvent.java
core/core/src/main/java/imagej/module/event/ModuleExecutedEvent.java
core/core/src/main/java/imagej/module/event/ModuleExecutingEvent.java
core/core/src/main/java/imagej/module/event/ModuleExecutionEvent.java
core/core/src/main/java/imagej/module/event/ModuleFinishedEvent.java
core/core/src/main/java/imagej/module/event/ModulePostprocessEvent.java
core/core/src/main/java/imagej/module/event/ModulePreprocessEvent.java
core/core/src/main/java/imagej/module/event/ModuleProcessEvent.java
core/core/src/main/java/imagej/module/event/ModuleStartedEvent.java
core/core/src/main/java/imagej/module/event/ModulesAddedEvent.java
core/core/src/main/java/imagej/module/event/ModulesListEvent.java
core/core/src/main/java/imagej/module/event/ModulesRemovedEvent.java
core/core/src/main/java/imagej/module/event/ModulesUpdatedEvent.java
core/core/src/main/java/imagej/options/DefaultOptionsService.java
core/core/src/main/java/imagej/options/OptionsPlugin.java
core/core/src/main/java/imagej/options/OptionsService.java
core/core/src/main/java/imagej/options/event/OptionsEvent.java
core/core/src/main/java/imagej/platform/AbstractPlatform.java
core/core/src/main/java/imagej/platform/AppEventService.java
core/core/src/main/java/imagej/platform/DefaultAppEventService.java
core/core/src/main/java/imagej/platform/DefaultPlatform.java
core/core/src/main/java/imagej/platform/DefaultPlatformService.java
core/core/src/main/java/imagej/platform/Platform.java
core/core/src/main/java/imagej/platform/PlatformService.java
core/core/src/main/java/imagej/platform/event/AppAboutEvent.java
core/core/src/main/java/imagej/platform/event/AppFocusEvent.java
core/core/src/main/java/imagej/platform/event/AppMenusCreatedEvent.java
core/core/src/main/java/imagej/platform/event/AppOpenFilesEvent.java
core/core/src/main/java/imagej/platform/event/AppPreferencesEvent.java
core/core/src/main/java/imagej/platform/event/AppPrintEvent.java
core/core/src/main/java/imagej/platform/event/AppQuitEvent.java
core/core/src/main/java/imagej/platform/event/AppReOpenEvent.java
core/core/src/main/java/imagej/platform/event/AppScreenSleepEvent.java
core/core/src/main/java/imagej/platform/event/AppSleepEvent.java
core/core/src/main/java/imagej/platform/event/AppSystemSleepEvent.java
core/core/src/main/java/imagej/platform/event/AppUserSessionEvent.java
core/core/src/main/java/imagej/platform/event/AppVisibleEvent.java
core/core/src/main/java/imagej/platform/event/ApplicationEvent.java
core/core/src/main/java/imagej/plugin/AbstractPostprocessorPlugin.java
core/core/src/main/java/imagej/plugin/AbstractPreprocessorPlugin.java
core/core/src/main/java/imagej/plugin/DebugPostprocessor.java
core/core/src/main/java/imagej/plugin/DebugPreprocessor.java
core/core/src/main/java/imagej/plugin/ImageJPlugin.java
core/core/src/main/java/imagej/plugin/InitPreprocessor.java
core/core/src/main/java/imagej/plugin/LoadInputsPreprocessor.java
core/core/src/main/java/imagej/plugin/PluginException.java
core/core/src/main/java/imagej/plugin/PostprocessorPlugin.java
core/core/src/main/java/imagej/plugin/PreprocessorPlugin.java
core/core/src/main/java/imagej/plugin/SaveInputsPreprocessor.java
core/core/src/main/java/imagej/plugin/ValidityPreprocessor.java
core/core/src/main/java/imagej/render/DummyRenderingService.java
core/core/src/main/java/imagej/render/DummyTextRenderer.java
core/core/src/main/java/imagej/render/RenderingService.java
core/core/src/main/java/imagej/render/TextRenderer.java
core/core/src/main/java/imagej/script/AbstractScriptContext.java
core/core/src/main/java/imagej/script/AbstractScriptEngine.java
core/core/src/main/java/imagej/script/AbstractScriptEngineFactory.java
core/core/src/main/java/imagej/script/CodeGenerator.java
core/core/src/main/java/imagej/script/CodeGeneratorJava.java
core/core/src/main/java/imagej/script/DefaultScriptService.java
core/core/src/main/java/imagej/script/InvocationObject.java
core/core/src/main/java/imagej/script/ParameterObject.java
core/core/src/main/java/imagej/script/ScriptFinder.java
core/core/src/main/java/imagej/script/ScriptLanguage.java
core/core/src/main/java/imagej/script/ScriptLanguageIndex.java
core/core/src/main/java/imagej/script/ScriptPlugin.java
core/core/src/main/java/imagej/script/ScriptService.java
core/core/src/main/java/imagej/script/io/ScriptIOPlugin.java
core/core/src/main/java/imagej/service/ImageJService.java
core/core/src/main/java/imagej/text/AbstractTextFormat.java
core/core/src/main/java/imagej/text/DefaultTextService.java
core/core/src/main/java/imagej/text/TextFormat.java
core/core/src/main/java/imagej/text/TextService.java
core/core/src/main/java/imagej/text/io/TextIOPlugin.java
core/core/src/main/java/imagej/tool/AbstractTool.java
core/core/src/main/java/imagej/tool/CustomDrawnTool.java
core/core/src/main/java/imagej/tool/DefaultToolService.java
core/core/src/main/java/imagej/tool/DummyTool.java
core/core/src/main/java/imagej/tool/IconDrawer.java
core/core/src/main/java/imagej/tool/IconService.java
core/core/src/main/java/imagej/tool/Tool.java
core/core/src/main/java/imagej/tool/ToolService.java
core/core/src/main/java/imagej/tool/event/ToolActivatedEvent.java
core/core/src/main/java/imagej/tool/event/ToolDeactivatedEvent.java
core/core/src/main/java/imagej/tool/event/ToolEvent.java
core/core/src/main/java/imagej/util/ARGBPlane.java
core/core/src/main/java/imagej/util/AppUtils.java
core/core/src/main/java/imagej/util/ColorRGB.java
core/core/src/main/java/imagej/util/ColorRGBA.java
core/core/src/main/java/imagej/util/Colors.java
core/core/src/main/java/imagej/util/IntCoords.java
core/core/src/main/java/imagej/util/IntRect.java
core/core/src/main/java/imagej/util/LineOutputStream.java
core/core/src/main/java/imagej/util/MediaWikiClient.java
core/core/src/main/java/imagej/util/MersenneTwisterFast.java
core/core/src/main/java/imagej/util/Prefs.java
core/core/src/main/java/imagej/util/RealCoords.java
core/core/src/main/java/imagej/util/RealRect.java
core/core/src/main/java/imagej/util/UnitUtils.java
core/core/src/main/java/imagej/widget/AbstractInputHarvester.java
core/core/src/main/java/imagej/widget/AbstractInputPanel.java
core/core/src/main/java/imagej/widget/AbstractInputWidget.java
core/core/src/main/java/imagej/widget/Button.java
core/core/src/main/java/imagej/widget/ButtonWidget.java
core/core/src/main/java/imagej/widget/ChoiceWidget.java
core/core/src/main/java/imagej/widget/ColorWidget.java
core/core/src/main/java/imagej/widget/DateWidget.java
core/core/src/main/java/imagej/widget/DefaultWidgetService.java
core/core/src/main/java/imagej/widget/FileWidget.java
core/core/src/main/java/imagej/widget/InputHarvester.java
core/core/src/main/java/imagej/widget/InputPanel.java
core/core/src/main/java/imagej/widget/InputWidget.java
core/core/src/main/java/imagej/widget/MessageWidget.java
core/core/src/main/java/imagej/widget/NumberWidget.java
core/core/src/main/java/imagej/widget/ObjectWidget.java
core/core/src/main/java/imagej/widget/TextWidget.java
core/core/src/main/java/imagej/widget/ToggleWidget.java
core/core/src/main/java/imagej/widget/UIComponent.java
core/core/src/main/java/imagej/widget/WidgetModel.java
core/core/src/main/java/imagej/widget/WidgetService.java
core/core/src/main/resources/icons/plugin.png
core/core/src/main/resources/icons/script_code.png
core/core/src/test/java/imagej/command/CommandServiceTest.java
core/core/src/test/java/imagej/display/DisplayTest.java
core/core/src/test/java/imagej/menu/ShadowMenuTest.java
core/core/src/test/java/imagej/options/OptionsTest.java
core/core/src/test/java/imagej/script/DummyService.java
core/core/src/test/java/imagej/script/JavascriptTest.java
core/core/src/test/java/imagej/test/TestUtils.java
core/core/src/test/java/imagej/util/ColorRGBTest.java
core/core/src/test/java/imagej/util/PrefsTest.java
core/core/src/test/java/imagej/util/UnitUtilsTest.java
core/data/.factorypath
core/data/.settings/org.eclipse.jdt.apt.core.prefs
core/data/LICENSE.txt
core/data/pom.xml
core/data/src/main/java/imagej/data/AbstractData.java
core/data/src/main/java/imagej/data/ChannelCollection.java
core/data/src/main/java/imagej/data/Data.java
core/data/src/main/java/imagej/data/Dataset.java
core/data/src/main/java/imagej/data/DatasetService.java
core/data/src/main/java/imagej/data/DefaultDataset.java
core/data/src/main/java/imagej/data/DefaultDatasetService.java
core/data/src/main/java/imagej/data/DefaultImgPlusService.java
core/data/src/main/java/imagej/data/DrawingTool.java
core/data/src/main/java/imagej/data/Extents.java
core/data/src/main/java/imagej/data/FloodFiller.java
core/data/src/main/java/imagej/data/ImageGrabber.java
core/data/src/main/java/imagej/data/ImgPlusService.java
core/data/src/main/java/imagej/data/Position.java
core/data/src/main/java/imagej/data/PositionableByAxis.java
core/data/src/main/java/imagej/data/animation/Animation.java
core/data/src/main/java/imagej/data/animation/AnimationService.java
core/data/src/main/java/imagej/data/animation/DefaultAnimationService.java
core/data/src/main/java/imagej/data/autoscale/AbstractAutoscaleMethod.java
core/data/src/main/java/imagej/data/autoscale/AutoscaleMethod.java
core/data/src/main/java/imagej/data/autoscale/AutoscaleService.java
core/data/src/main/java/imagej/data/autoscale/ConfidenceIntervalAutoscaleMethod.java
core/data/src/main/java/imagej/data/autoscale/DataRange.java
core/data/src/main/java/imagej/data/autoscale/DefaultAutoscaleMethod.java
core/data/src/main/java/imagej/data/autoscale/DefaultAutoscaleService.java
core/data/src/main/java/imagej/data/command/InteractiveImageCommand.java
core/data/src/main/java/imagej/data/command/Previewable.java
core/data/src/main/java/imagej/data/commands/AbstractPlanarCommand.java
core/data/src/main/java/imagej/data/commands/PlanarCommand.java
core/data/src/main/java/imagej/data/display/AbstractDataView.java
core/data/src/main/java/imagej/data/display/ActiveImagePreprocessor.java
core/data/src/main/java/imagej/data/display/ColorMode.java
core/data/src/main/java/imagej/data/display/ColorTables.java
core/data/src/main/java/imagej/data/display/DataView.java
core/data/src/main/java/imagej/data/display/DatasetView.java
core/data/src/main/java/imagej/data/display/DefaultDatasetView.java
core/data/src/main/java/imagej/data/display/DefaultImageCanvas.java
core/data/src/main/java/imagej/data/display/DefaultImageDisplay.java
core/data/src/main/java/imagej/data/display/DefaultImageDisplayService.java
core/data/src/main/java/imagej/data/display/DefaultInputService.java
core/data/src/main/java/imagej/data/display/DefaultOverlayService.java
core/data/src/main/java/imagej/data/display/DefaultOverlayView.java
core/data/src/main/java/imagej/data/display/DefaultWindowService.java
core/data/src/main/java/imagej/data/display/DummyScreenCaptureService.java
core/data/src/main/java/imagej/data/display/ImageCanvas.java
core/data/src/main/java/imagej/data/display/ImageDisplay.java
core/data/src/main/java/imagej/data/display/ImageDisplayService.java
core/data/src/main/java/imagej/data/display/InputService.java
core/data/src/main/java/imagej/data/display/OverlayInfo.java
core/data/src/main/java/imagej/data/display/OverlayInfoList.java
core/data/src/main/java/imagej/data/display/OverlayService.java
core/data/src/main/java/imagej/data/display/OverlayView.java
core/data/src/main/java/imagej/data/display/Pannable.java
core/data/src/main/java/imagej/data/display/ScreenCaptureService.java
core/data/src/main/java/imagej/data/display/SelectWindow.java
core/data/src/main/java/imagej/data/display/SourceOptimizedCompositeXYProjector.java
core/data/src/main/java/imagej/data/display/WindowService.java
core/data/src/main/java/imagej/data/display/Zoomable.java
core/data/src/main/java/imagej/data/display/event/AxisActivatedEvent.java
core/data/src/main/java/imagej/data/display/event/AxisEvent.java
core/data/src/main/java/imagej/data/display/event/AxisPositionEvent.java
core/data/src/main/java/imagej/data/display/event/CanvasEvent.java
core/data/src/main/java/imagej/data/display/event/DataViewDeselectedEvent.java
core/data/src/main/java/imagej/data/display/event/DataViewEvent.java
core/data/src/main/java/imagej/data/display/event/DataViewSelectedEvent.java
core/data/src/main/java/imagej/data/display/event/DataViewSelectionEvent.java
core/data/src/main/java/imagej/data/display/event/DataViewUpdatedEvent.java
core/data/src/main/java/imagej/data/display/event/DelayedPositionEvent.java
core/data/src/main/java/imagej/data/display/event/ImageDisplayEvent.java
core/data/src/main/java/imagej/data/display/event/LUTsChangedEvent.java
core/data/src/main/java/imagej/data/display/event/MouseCursorEvent.java
core/data/src/main/java/imagej/data/display/event/PanZoomEvent.java
core/data/src/main/java/imagej/data/display/event/ViewportResizeEvent.java
core/data/src/main/java/imagej/data/event/DataCreatedEvent.java
core/data/src/main/java/imagej/data/event/DataDeletedEvent.java
core/data/src/main/java/imagej/data/event/DataModifiedEvent.java
core/data/src/main/java/imagej/data/event/DataRestructuredEvent.java
core/data/src/main/java/imagej/data/event/DataUpdatedEvent.java
core/data/src/main/java/imagej/data/event/DatasetCreatedEvent.java
core/data/src/main/java/imagej/data/event/DatasetDeletedEvent.java
core/data/src/main/java/imagej/data/event/DatasetRGBChangedEvent.java
core/data/src/main/java/imagej/data/event/DatasetRestructuredEvent.java
core/data/src/main/java/imagej/data/event/DatasetTypeChangedEvent.java
core/data/src/main/java/imagej/data/event/DatasetUpdatedEvent.java
core/data/src/main/java/imagej/data/event/OverlayCreatedEvent.java
core/data/src/main/java/imagej/data/event/OverlayDeletedEvent.java
core/data/src/main/java/imagej/data/event/OverlayRestructuredEvent.java
core/data/src/main/java/imagej/data/event/OverlayUpdatedEvent.java
core/data/src/main/java/imagej/data/io/DatasetIOPlugin.java
core/data/src/main/java/imagej/data/lut/DefaultLUTService.java
core/data/src/main/java/imagej/data/lut/LUTFinder.java
core/data/src/main/java/imagej/data/lut/LUTSelectorPlugin.java
core/data/src/main/java/imagej/data/lut/LUTService.java
core/data/src/main/java/imagej/data/lut/io/LUTIOPlugin.java
core/data/src/main/java/imagej/data/measure/BasicStats.java
core/data/src/main/java/imagej/data/measure/BasicStatsFunction.java
core/data/src/main/java/imagej/data/measure/DefaultMeasurementService.java
core/data/src/main/java/imagej/data/measure/DefaultStatisticsService.java
core/data/src/main/java/imagej/data/measure/MeasurementService.java
core/data/src/main/java/imagej/data/measure/MeasurementSet.java
core/data/src/main/java/imagej/data/measure/MeasurementSetFunction.java
core/data/src/main/java/imagej/data/measure/StatisticsService.java
core/data/src/main/java/imagej/data/minmax/AbstractMinMaxMethod.java
core/data/src/main/java/imagej/data/minmax/DefaultMinMaxMethod.java
core/data/src/main/java/imagej/data/minmax/MinMaxMethod.java
core/data/src/main/java/imagej/data/operator/AbstractCalculatorOp.java
core/data/src/main/java/imagej/data/operator/CalculatorOp.java
core/data/src/main/java/imagej/data/operator/CalculatorService.java
core/data/src/main/java/imagej/data/operator/DefaultCalculatorService.java
core/data/src/main/java/imagej/data/operator/OpAdd.java
core/data/src/main/java/imagej/data/operator/OpAnd.java
core/data/src/main/java/imagej/data/operator/OpAverage.java
core/data/src/main/java/imagej/data/operator/OpCopy.java
core/data/src/main/java/imagej/data/operator/OpDifference.java
core/data/src/main/java/imagej/data/operator/OpDivide.java
core/data/src/main/java/imagej/data/operator/OpMax.java
core/data/src/main/java/imagej/data/operator/OpMin.java
core/data/src/main/java/imagej/data/operator/OpMultiply.java
core/data/src/main/java/imagej/data/operator/OpOr.java
core/data/src/main/java/imagej/data/operator/OpSubtract.java
core/data/src/main/java/imagej/data/operator/OpTransparentZero.java
core/data/src/main/java/imagej/data/operator/OpXor.java
core/data/src/main/java/imagej/data/options/OptionsChannels.java
core/data/src/main/java/imagej/data/options/OptionsOverlay.java
core/data/src/main/java/imagej/data/overlay/AbstractOverlay.java
core/data/src/main/java/imagej/data/overlay/AbstractROIOverlay.java
core/data/src/main/java/imagej/data/overlay/AngleOverlay.java
core/data/src/main/java/imagej/data/overlay/BinaryMaskOverlay.java
core/data/src/main/java/imagej/data/overlay/CompositeOverlay.java
core/data/src/main/java/imagej/data/overlay/EllipseOverlay.java
core/data/src/main/java/imagej/data/overlay/GeneralPathOverlay.java
core/data/src/main/java/imagej/data/overlay/LineOverlay.java
core/data/src/main/java/imagej/data/overlay/Overlay.java
core/data/src/main/java/imagej/data/overlay/OverlaySettings.java
core/data/src/main/java/imagej/data/overlay/PointOverlay.java
core/data/src/main/java/imagej/data/overlay/PolygonOverlay.java
core/data/src/main/java/imagej/data/overlay/RectangleOverlay.java
core/data/src/main/java/imagej/data/overlay/TextOverlay.java
core/data/src/main/java/imagej/data/overlay/ThresholdOverlay.java
core/data/src/main/java/imagej/data/sampler/AxisSubrange.java
core/data/src/main/java/imagej/data/sampler/DefaultSamplerService.java
core/data/src/main/java/imagej/data/sampler/DensePositionIterator.java
core/data/src/main/java/imagej/data/sampler/PositionIterator.java
core/data/src/main/java/imagej/data/sampler/SamplerService.java
core/data/src/main/java/imagej/data/sampler/SamplingDefinition.java
core/data/src/main/java/imagej/data/sampler/SparsePositionIterator.java
core/data/src/main/java/imagej/data/table/AbstractTable.java
core/data/src/main/java/imagej/data/table/Column.java
core/data/src/main/java/imagej/data/table/DefaultColumn.java
core/data/src/main/java/imagej/data/table/DefaultGenericTable.java
core/data/src/main/java/imagej/data/table/DefaultResultsTable.java
core/data/src/main/java/imagej/data/table/DefaultTableDisplay.java
core/data/src/main/java/imagej/data/table/DoubleColumn.java
core/data/src/main/java/imagej/data/table/GenericColumn.java
core/data/src/main/java/imagej/data/table/GenericTable.java
core/data/src/main/java/imagej/data/table/ResultsImg.java
core/data/src/main/java/imagej/data/table/ResultsTable.java
core/data/src/main/java/imagej/data/table/Table.java
core/data/src/main/java/imagej/data/table/TableDisplay.java
core/data/src/main/java/imagej/data/table/TableLoader.java
core/data/src/main/java/imagej/data/threshold/AbstractThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/DefaultThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/DefaultThresholdService.java
core/data/src/main/java/imagej/data/threshold/HuangThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/IntermodesThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/IsoDataThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/LiThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/MaxEntropyThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/MaxLikelihoodThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/MeanThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/MinErrorThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/MinimumThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/MomentsThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/OtsuThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/PercentileThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/RenyiEntropyThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/ShanbhagThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/ThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/ThresholdService.java
core/data/src/main/java/imagej/data/threshold/TriangleThresholdMethod.java
core/data/src/main/java/imagej/data/threshold/Utils.java
core/data/src/main/java/imagej/data/threshold/YenThresholdMethod.java
core/data/src/main/java/imagej/data/types/BigComplex.java
core/data/src/main/java/imagej/data/types/DataType.java
core/data/src/main/java/imagej/data/types/DataType128BitSignedComplexFloat.java
core/data/src/main/java/imagej/data/types/DataType12BitUnsignedInteger.java
core/data/src/main/java/imagej/data/types/DataType16BitSignedInteger.java
core/data/src/main/java/imagej/data/types/DataType16BitUnsignedInteger.java
core/data/src/main/java/imagej/data/types/DataType1BitUnsignedInteger.java
core/data/src/main/java/imagej/data/types/DataType32BitSignedFloat.java
core/data/src/main/java/imagej/data/types/DataType32BitSignedInteger.java
core/data/src/main/java/imagej/data/types/DataType32BitUnsignedInteger.java
core/data/src/main/java/imagej/data/types/DataType64BitSignedComplexFloat.java
core/data/src/main/java/imagej/data/types/DataType64BitSignedFloat.java
core/data/src/main/java/imagej/data/types/DataType64BitSignedInteger.java
core/data/src/main/java/imagej/data/types/DataType8BitSignedInteger.java
core/data/src/main/java/imagej/data/types/DataType8BitUnsignedInteger.java
core/data/src/main/java/imagej/data/types/DataTypeService.java
core/data/src/main/java/imagej/data/types/DataTypeVariableBitSignedComplexFloat.java
core/data/src/main/java/imagej/data/types/DataTypeVariableBitSignedFloat.java
core/data/src/main/java/imagej/data/types/DataTypeVariableBitSignedInteger.java
core/data/src/main/java/imagej/data/types/DefaultDataTypeService.java
core/data/src/main/java/imagej/data/types/PreciseFixedComplexFloatType.java
core/data/src/main/java/imagej/data/types/PreciseFixedFloatType.java
core/data/src/main/java/imagej/data/types/UnboundedIntegerType.java
core/data/src/main/java/imagej/data/widget/ColorTableWidget.java
core/data/src/main/java/imagej/data/widget/HistogramBundle.java
core/data/src/main/java/imagej/data/widget/HistogramWidget.java
core/data/src/main/resources/luts/3-3-2 RGB.lut
core/data/src/main/resources/luts/Blue.lut
core/data/src/main/resources/luts/Cyan.lut
core/data/src/main/resources/luts/Fire.lut
core/data/src/main/resources/luts/Grays.lut
core/data/src/main/resources/luts/Green.lut
core/data/src/main/resources/luts/Ice.lut
core/data/src/main/resources/luts/Magenta.lut
core/data/src/main/resources/luts/NCSA PalEdit/16_colors.lut
core/data/src/main/resources/luts/NCSA PalEdit/5_ramps.lut
core/data/src/main/resources/luts/NCSA PalEdit/6_shades.lut
core/data/src/main/resources/luts/NCSA PalEdit/blue_orange_icb.lut
core/data/src/main/resources/luts/NCSA PalEdit/brgbcmyw.lut
core/data/src/main/resources/luts/NCSA PalEdit/cool.lut
core/data/src/main/resources/luts/NCSA PalEdit/edges.lut
core/data/src/main/resources/luts/NCSA PalEdit/gem.lut
core/data/src/main/resources/luts/NCSA PalEdit/phase.lut
core/data/src/main/resources/luts/NCSA PalEdit/royal.lut
core/data/src/main/resources/luts/NCSA PalEdit/sepia.lut
core/data/src/main/resources/luts/NCSA PalEdit/smart.lut
core/data/src/main/resources/luts/NCSA PalEdit/thal.lut
core/data/src/main/resources/luts/NCSA PalEdit/thallium.lut
core/data/src/main/resources/luts/NCSA PalEdit/unionjack.lut
core/data/src/main/resources/luts/README.txt
core/data/src/main/resources/luts/Red-Green.lut
core/data/src/main/resources/luts/Red.lut
core/data/src/main/resources/luts/Spectrum.lut
core/data/src/main/resources/luts/WCIF/Cyan Hot.lut
core/data/src/main/resources/luts/WCIF/Green Fire Blue.lut
core/data/src/main/resources/luts/WCIF/HiLo.lut
core/data/src/main/resources/luts/WCIF/ICA.lut
core/data/src/main/resources/luts/WCIF/ICA2.lut
core/data/src/main/resources/luts/WCIF/ICA3.lut
core/data/src/main/resources/luts/WCIF/Magenta Hot.lut
core/data/src/main/resources/luts/WCIF/Orange Hot.lut
core/data/src/main/resources/luts/WCIF/Rainbow RGB.lut
core/data/src/main/resources/luts/WCIF/Red Hot.lut
core/data/src/main/resources/luts/WCIF/Yellow Hot.lut
core/data/src/main/resources/luts/Yellow.lut
core/data/src/test/java/imagej/data/DatasetTest.java
core/data/src/test/java/imagej/data/ExtentsTest.java
core/data/src/test/java/imagej/data/PositionTest.java
core/data/src/test/java/imagej/data/TestCursorSpeeds.java
core/data/src/test/java/imagej/data/TestImgPlusService.java
core/data/src/test/java/imagej/data/autoscale/ConfidenceIntervalAutoscaleMethodTest.java
core/data/src/test/java/imagej/data/display/ImageCanvasTest.java
core/data/src/test/java/imagej/data/lut/LUTFinderTest.java
core/data/src/test/java/imagej/data/overlay/TestBinaryMaskOverlay.java
core/data/src/test/java/imagej/data/table/DefaultResultsTableTest.java
core/data/src/test/java/imagej/data/types/BigComplexTest.java
core/data/src/test/java/imagej/data/types/PreciseFixedComplexFloatTypeTest.java
core/data/src/test/java/imagej/data/types/PreciseFixedFloatTypeTest.java
core/legacy/.factorypath
core/legacy/.settings/org.eclipse.jdt.apt.core.prefs
core/legacy/LICENSE.txt
core/legacy/pom.xml
core/legacy/src/main/java/imagej/legacy/CodeHacker.java
core/legacy/src/main/java/imagej/legacy/DefaultLegacyService.java
core/legacy/src/main/java/imagej/legacy/DummyLegacyService.java
core/legacy/src/main/java/imagej/legacy/IJ1Helper.java
core/legacy/src/main/java/imagej/legacy/LegacyExtensions.java
core/legacy/src/main/java/imagej/legacy/LegacyHeadless.java
core/legacy/src/main/java/imagej/legacy/LegacyImageMap.java
core/legacy/src/main/java/imagej/legacy/LegacyInjector.java
core/legacy/src/main/java/imagej/legacy/LegacyJavaAgent.java
core/legacy/src/main/java/imagej/legacy/LegacyOutputTracker.java
core/legacy/src/main/java/imagej/legacy/LegacyService.java
core/legacy/src/main/java/imagej/legacy/OptionsSynchronizer.java
core/legacy/src/main/java/imagej/legacy/SwitchToModernMode.java
core/legacy/src/main/java/imagej/legacy/Utils.java
core/legacy/src/main/java/imagej/legacy/app/LegacyImageJApp.java
core/legacy/src/main/java/imagej/legacy/patches/FunctionsMethods.java
core/legacy/src/main/java/imagej/legacy/patches/IJMethods.java
core/legacy/src/main/java/imagej/legacy/patches/ImageJMethods.java
core/legacy/src/main/java/imagej/legacy/patches/ImagePlusMethods.java
core/legacy/src/main/java/imagej/legacy/patches/ImageWindowMethods.java
core/legacy/src/main/java/imagej/legacy/patches/PluginClassLoaderMethods.java
core/legacy/src/main/java/imagej/legacy/plugin/LegacyCommand.java
core/legacy/src/main/java/imagej/legacy/plugin/LegacyPluginFinder.java
core/legacy/src/main/java/imagej/legacy/plugin/LegacyThreadGroup.java
core/legacy/src/main/java/imagej/legacy/plugin/MixedWorldCommand.java
core/legacy/src/main/java/imagej/legacy/plugin/SwitchToLegacyMode.java
core/legacy/src/main/java/imagej/legacy/translate/ColorDisplayCreator.java
core/legacy/src/main/java/imagej/legacy/translate/ColorImagePlusCreator.java
core/legacy/src/main/java/imagej/legacy/translate/ColorPixelHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/ColorTableHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/CompositeHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/DataHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/DatasetUtils.java
core/legacy/src/main/java/imagej/legacy/translate/DefaultImageTranslator.java
core/legacy/src/main/java/imagej/legacy/translate/DisplayCreator.java
core/legacy/src/main/java/imagej/legacy/translate/DisplayHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/GrayDisplayCreator.java
core/legacy/src/main/java/imagej/legacy/translate/GrayImagePlusCreator.java
core/legacy/src/main/java/imagej/legacy/translate/GrayPixelHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/Harmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/ImagePlusCreator.java
core/legacy/src/main/java/imagej/legacy/translate/ImageTranslator.java
core/legacy/src/main/java/imagej/legacy/translate/LegacyUtils.java
core/legacy/src/main/java/imagej/legacy/translate/MergedRgbVirtualStack.java
core/legacy/src/main/java/imagej/legacy/translate/MetadataHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/NameHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/OverlayHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/PlaneHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/PositionHarmonizer.java
core/legacy/src/main/java/imagej/legacy/translate/ResultsTableHarmonizer.java
core/legacy/src/main/resources/icons/legacy.png
core/legacy/src/main/resources/imagej/legacy/plugin/plugin-blacklist.txt
core/legacy/src/test/java/imagej/legacy/CodeHackerIT.java
core/legacy/src/test/java/imagej/legacy/ExtraPluginDirsTest.java
core/legacy/src/test/java/imagej/legacy/HeadlessCompletenessTest.java
core/legacy/src/test/java/imagej/legacy/Headless_Example_Plugin.java
core/legacy/src/test/java/imagej/legacy/Helper.java
core/legacy/src/test/java/imagej/legacy/LegacyHeadlessTest.java
core/legacy/src/test/java/imagej/legacy/LegacyImageMapTest.java
core/legacy/src/test/java/imagej/legacy/LegacyJavaAgentIT.java
core/legacy/src/test/java/imagej/legacy/LegacyServiceTest.java
core/legacy/src/test/java/imagej/legacy/LegacyTestUtils.java
core/legacy/src/test/java/imagej/legacy/OverlayHarmonizerTest.java
core/legacy/src/test/java/imagej/legacy/Set_Property.java
core/legacy/src/test/java/imagej/legacy/translate/LegacyUtilsTest.java
core/legacy/src/test/java/imagej/legacy/translate/MergedRgbVirtualStackTest.java
core/options/.factorypath
core/options/.settings/org.eclipse.jdt.apt.core.prefs
core/options/LICENSE.txt
core/options/pom.xml
core/options/src/main/java/imagej/core/options/OptionsAppearance.java
core/options/src/main/java/imagej/core/options/OptionsArrowTool.java
core/options/src/main/java/imagej/core/options/OptionsCompatibility.java
core/options/src/main/java/imagej/core/options/OptionsCompiler.java
core/options/src/main/java/imagej/core/options/OptionsConversions.java
core/options/src/main/java/imagej/core/options/OptionsDicom.java
core/options/src/main/java/imagej/core/options/OptionsFont.java
core/options/src/main/java/imagej/core/options/OptionsInputOutput.java
core/options/src/main/java/imagej/core/options/OptionsLineWidth.java
core/options/src/main/java/imagej/core/options/OptionsMemoryAndThreads.java
core/options/src/main/java/imagej/core/options/OptionsMisc.java
core/options/src/main/java/imagej/core/options/OptionsPointTool.java
core/options/src/main/java/imagej/core/options/OptionsProfilePlot.java
core/options/src/main/java/imagej/core/options/OptionsProxy.java
core/options/src/main/java/imagej/core/options/OptionsReset.java
core/options/src/main/java/imagej/core/options/OptionsRoundedRectangleTool.java
core/options/src/main/java/imagej/core/options/OptionsWandTool.java
core/pom.xml
core/ui/.factorypath
core/ui/.settings/org.eclipse.jdt.apt.core.prefs
core/ui/LICENSE.txt
core/ui/pom.xml
core/ui/src/main/java/imagej/ui/AbstractInputHarvesterPlugin.java
core/ui/src/main/java/imagej/ui/AbstractUIInputWidget.java
core/ui/src/main/java/imagej/ui/AbstractUserInterface.java
core/ui/src/main/java/imagej/ui/ApplicationFrame.java
core/ui/src/main/java/imagej/ui/Arrangeable.java
core/ui/src/main/java/imagej/ui/DefaultUIService.java
core/ui/src/main/java/imagej/ui/Desktop.java
core/ui/src/main/java/imagej/ui/DialogPrompt.java
core/ui/src/main/java/imagej/ui/FilePreprocessor.java
core/ui/src/main/java/imagej/ui/ShowReadme.java
core/ui/src/main/java/imagej/ui/StatusBar.java
core/ui/src/main/java/imagej/ui/SystemClipboard.java
core/ui/src/main/java/imagej/ui/ToolBar.java
core/ui/src/main/java/imagej/ui/UIPreprocessor.java
core/ui/src/main/java/imagej/ui/UIService.java
core/ui/src/main/java/imagej/ui/UserInterface.java
core/ui/src/main/java/imagej/ui/console/OpenArgument.java
core/ui/src/main/java/imagej/ui/console/UIArgument.java
core/ui/src/main/java/imagej/ui/dnd/AbstractDragAndDropData.java
core/ui/src/main/java/imagej/ui/dnd/AbstractDragAndDropHandler.java
core/ui/src/main/java/imagej/ui/dnd/DefaultDragAndDropData.java
core/ui/src/main/java/imagej/ui/dnd/DefaultDragAndDropService.java
core/ui/src/main/java/imagej/ui/dnd/DragAndDropData.java
core/ui/src/main/java/imagej/ui/dnd/DragAndDropHandler.java
core/ui/src/main/java/imagej/ui/dnd/DragAndDropService.java
core/ui/src/main/java/imagej/ui/dnd/FileDragAndDropHandler.java
core/ui/src/main/java/imagej/ui/dnd/LUTFileDragAndDropHandler.java
core/ui/src/main/java/imagej/ui/dnd/ListDragAndDropHandler.java
core/ui/src/main/java/imagej/ui/dnd/MIMEType.java
core/ui/src/main/java/imagej/ui/dnd/ScriptFileDragAndDropHandler.java
core/ui/src/main/java/imagej/ui/dnd/event/DragAndDropEvent.java
core/ui/src/main/java/imagej/ui/dnd/event/DragEnterEvent.java
core/ui/src/main/java/imagej/ui/dnd/event/DragExitEvent.java
core/ui/src/main/java/imagej/ui/dnd/event/DragOverEvent.java
core/ui/src/main/java/imagej/ui/dnd/event/DropEvent.java
core/ui/src/main/java/imagej/ui/viewer/AbstractDisplayViewer.java
core/ui/src/main/java/imagej/ui/viewer/DisplayPanel.java
core/ui/src/main/java/imagej/ui/viewer/DisplayViewer.java
core/ui/src/main/java/imagej/ui/viewer/DisplayWindow.java
core/ui/src/main/java/imagej/ui/viewer/image/AbstractImageDisplayViewer.java
core/ui/src/main/java/imagej/ui/viewer/image/ImageDisplayPanel.java
core/ui/src/main/java/imagej/ui/viewer/image/ImageDisplayViewer.java
core/ui/src/main/java/imagej/ui/viewer/table/AbstractTableDisplayViewer.java
core/ui/src/main/java/imagej/ui/viewer/table/TableDisplayPanel.java
core/ui/src/main/java/imagej/ui/viewer/table/TableDisplayViewer.java
core/ui/src/main/java/imagej/ui/viewer/text/AbstractTextDisplayViewer.java
core/ui/src/main/java/imagej/ui/viewer/text/TextDisplayPanel.java
core/ui/src/main/java/imagej/ui/viewer/text/TextDisplayViewer.java
core/updater/.factorypath
core/updater/.settings/org.eclipse.jdt.apt.core.prefs
core/updater/LICENSE.txt
core/updater/pom.xml
core/updater/src/main/java/imagej/updater/core/AbstractUploader.java
core/updater/src/main/java/imagej/updater/core/Checksummer.java
core/updater/src/main/java/imagej/updater/core/Conflicts.java
core/updater/src/main/java/imagej/updater/core/DefaultUploaderService.java
core/updater/src/main/java/imagej/updater/core/Dependency.java
core/updater/src/main/java/imagej/updater/core/Diff.java
core/updater/src/main/java/imagej/updater/core/FileObject.java
core/updater/src/main/java/imagej/updater/core/FileUploader.java
core/updater/src/main/java/imagej/updater/core/FilesCollection.java
core/updater/src/main/java/imagej/updater/core/FilesUploader.java
core/updater/src/main/java/imagej/updater/core/GroupAction.java
core/updater/src/main/java/imagej/updater/core/Installer.java
core/updater/src/main/java/imagej/updater/core/POMParser.java
core/updater/src/main/java/imagej/updater/core/UpToDate.java
core/updater/src/main/java/imagej/updater/core/UpdateSite.java
core/updater/src/main/java/imagej/updater/core/UpdaterUI.java
core/updater/src/main/java/imagej/updater/core/UpdaterUIPlugin.java
core/updater/src/main/java/imagej/updater/core/Uploadable.java
core/updater/src/main/java/imagej/updater/core/UploadableFile.java
core/updater/src/main/java/imagej/updater/core/Uploader.java
core/updater/src/main/java/imagej/updater/core/UploaderService.java
core/updater/src/main/java/imagej/updater/core/XMLFileDownloader.java
core/updater/src/main/java/imagej/updater/core/XMLFileErrorHandler.java
core/updater/src/main/java/imagej/updater/core/XMLFileReader.java
core/updater/src/main/java/imagej/updater/core/XMLFileWriter.java
core/updater/src/main/java/imagej/updater/core/action/InstallOrUpdate.java
core/updater/src/main/java/imagej/updater/core/action/KeepAsIs.java
core/updater/src/main/java/imagej/updater/core/action/Remove.java
core/updater/src/main/java/imagej/updater/core/action/Uninstall.java
core/updater/src/main/java/imagej/updater/core/action/Upload.java
core/updater/src/main/java/imagej/updater/ui/CommandLine.java
core/updater/src/main/java/imagej/updater/ui/UpdatesAvailable.java
core/updater/src/main/java/imagej/updater/util/AbstractProgressable.java
core/updater/src/main/java/imagej/updater/util/AvailableSites.java
core/updater/src/main/java/imagej/updater/util/ByteCodeAnalyzer.java
core/updater/src/main/java/imagej/updater/util/Canceled.java
core/updater/src/main/java/imagej/updater/util/Class2JarFilesMap.java
core/updater/src/main/java/imagej/updater/util/DependencyAnalyzer.java
core/updater/src/main/java/imagej/updater/util/Downloadable.java
core/updater/src/main/java/imagej/updater/util/Downloader.java
core/updater/src/main/java/imagej/updater/util/DropboxURLMapper.java
core/updater/src/main/java/imagej/updater/util/FilterManifest.java
core/updater/src/main/java/imagej/updater/util/InputStream2OutputStream.java
core/updater/src/main/java/imagej/updater/util/Progress.java
core/updater/src/main/java/imagej/updater/util/Progressable.java
core/updater/src/main/java/imagej/updater/util/SkipHashedLines.java
core/updater/src/main/java/imagej/updater/util/StderrLogService.java
core/updater/src/main/java/imagej/updater/util/StderrProgress.java
core/updater/src/main/java/imagej/updater/util/UpdateCanceledException.java
core/updater/src/main/java/imagej/updater/util/UpdaterUserInterface.java
core/updater/src/main/java/imagej/updater/util/Util.java
core/updater/src/test/java/imagej/updater/calvin/HobbesUploader.java
core/updater/src/test/java/imagej/updater/core/AbstractUploaderTestBase.java
core/updater/src/test/java/imagej/updater/core/CommandLineUpdaterTest.java
core/updater/src/test/java/imagej/updater/core/CustomUploaderTest.java
core/updater/src/test/java/imagej/updater/core/LocalhostUploaderTest.java
core/updater/src/test/java/imagej/updater/core/UpdaterTest.java
core/updater/src/test/java/imagej/updater/core/UpdaterTestUtils.java
core/updater/src/test/java/imagej/updater/test/Dependencee.java
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core/updater/src/test/java/imagej/updater/util/DependencyAnalyzerTest.java
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minimaven/src/main/java/imagej/build/minimaven/BuildEnvironment.java
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minimaven/src/main/java/imagej/build/minimaven/JarClassLoader.java
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minimaven/src/main/java/imagej/build/minimaven/VersionPOMHandler.java
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plugins/text/src/main/java/imagej/core/text/DefaultTextFormat.java
plugins/text/src/main/java/imagej/core/text/MarkdownTextFormat.java
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plugins/tools/src/main/java/imagej/core/tools/AbstractLineTool.java
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plugins/tools/src/main/java/imagej/core/tools/AxisPositionHandler.java
plugins/tools/src/main/java/imagej/core/tools/BgColorTool.java
plugins/tools/src/main/java/imagej/core/tools/ContextMenuHandler.java
plugins/tools/src/main/java/imagej/core/tools/FgColorTool.java
plugins/tools/src/main/java/imagej/core/tools/FloodFillTool.java
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plugins/tools/src/main/java/imagej/core/tools/KonamiHandler.java
plugins/tools/src/main/java/imagej/core/tools/PaintBrushTool.java
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plugins/tools/src/main/java/imagej/core/tools/PanActivator.java
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plugins/tools/src/main/java/imagej/core/tools/PixelProbe.java
plugins/tools/src/main/java/imagej/core/tools/PixelRecorder.java
plugins/tools/src/main/java/imagej/core/tools/SprayCanTool.java
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plugins/tools/src/main/java/imagej/core/tools/TunePlayer.java
plugins/tools/src/main/java/imagej/core/tools/WandTool.java
plugins/tools/src/main/java/imagej/core/tools/ZoomHandler.java
plugins/tools/src/main/java/imagej/core/tools/ZoomTool.java
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plugins/uis/awt/LICENSE.txt
plugins/uis/awt/pom.xml
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plugins/uis/awt/src/main/java/imagej/ui/awt/AWTStatusBar.java
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plugins/uis/awt/src/main/java/imagej/ui/awt/menu/AWTMenuBarCreator.java
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plugins/uis/awt/src/main/java/imagej/ui/awt/menu/AWTPopupMenuCreator.java
plugins/uis/awt/src/main/java/imagej/ui/awt/menu/AbstractAWTMenuCreator.java
plugins/uis/awt/src/main/java/imagej/ui/awt/widget/AWTButtonWidget.java
plugins/uis/awt/src/main/java/imagej/ui/awt/widget/AWTChoiceWidget.java
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plugins/uis/awt/src/main/java/imagej/ui/awt/widget/AWTNumberWidget.java
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plugins/uis/pivot/pom.xml
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plugins/uis/pivot/src/main/java/imagej/ui/pivot/widget/PivotNumberScrollBarWidget.java
plugins/uis/pivot/src/main/java/imagej/ui/pivot/widget/PivotNumberSliderWidget.java
plugins/uis/pivot/src/main/java/imagej/ui/pivot/widget/PivotNumberSpinnerWidget.java
plugins/uis/pivot/src/main/java/imagej/ui/pivot/widget/PivotNumberWidget.java
plugins/uis/pivot/src/main/java/imagej/ui/pivot/widget/PivotObjectWidget.java
plugins/uis/pivot/src/main/java/imagej/ui/pivot/widget/PivotTextWidget.java
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plugins/uis/pom.xml
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plugins/uis/swing/pom.xml
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plugins/uis/swing/src/main/java/imagej/ui/swing/SwingApplicationFrame.java
plugins/uis/swing/src/main/java/imagej/ui/swing/SwingColorBar.java
plugins/uis/swing/src/main/java/imagej/ui/swing/SwingIconService.java
plugins/uis/swing/src/main/java/imagej/ui/swing/SwingOverlayManager.java
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plugins/uis/swing/src/main/java/imagej/ui/swing/mdi/WindowsTileVertical.java
plugins/uis/swing/src/main/java/imagej/ui/swing/mdi/viewer/SwingMdiDisplayWindow.java
plugins/uis/swing/src/main/java/imagej/ui/swing/mdi/viewer/SwingMdiImageDisplayViewer.java
plugins/uis/swing/src/main/java/imagej/ui/swing/menu/AbstractSwingMenuCreator.java
plugins/uis/swing/src/main/java/imagej/ui/swing/menu/SwingJMenuBarCreator.java
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plugins/uis/swing/src/main/java/imagej/ui/swing/overlay/FigureCreatedEvent.java
plugins/uis/swing/src/main/java/imagej/ui/swing/overlay/IJBezierTool.java
plugins/uis/swing/src/main/java/imagej/ui/swing/overlay/IJCreationTool.java
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plugins/uis/swing/src/main/java/imagej/ui/swing/overlay/ToolDelegator.java
plugins/uis/swing/src/main/java/imagej/ui/swing/sdi/SwingDialogPrompt.java
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plugins/uis/swing/src/main/java/imagej/ui/swing/sdi/viewer/SwingSdiImageDisplayViewer.java
plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/image/AbstractSwingImageDisplayViewer.java
plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/image/DatasetFigureView.java
plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/image/FigureView.java
plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/image/JHotDrawImageCanvas.java
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plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/image/SwingDisplayPanel.java
plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/image/SwingImageDisplayViewer.java
plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/table/SwingTableDisplayPanel.java
plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/table/SwingTableDisplayViewer.java
plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/text/SwingTextDisplayPanel.java
plugins/uis/swing/src/main/java/imagej/ui/swing/viewer/text/SwingTextDisplayViewer.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/DocumentSizeFilter.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SpinnerBigDecimalModel.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SpinnerBigIntegerModel.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SpinnerNumberModelFactory.java
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plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingButtonWidget.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingChoiceRadioWidget.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingChoiceWidget.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingColorTableWidget.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingColorWidget.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingDateWidget.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingFileWidget.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingHistogramWidget.java
plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingInputHarvester.java
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plugins/uis/swing/src/main/java/imagej/ui/swing/widget/SwingToggleWidget.java
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plugins/uploaders/LICENSE.txt
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plugins/uploaders/ssh/pom.xml
plugins/uploaders/ssh/src/main/java/imagej/updater/ssh/SFTPFileUploader.java
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plugins/uploaders/ssh/src/main/java/imagej/updater/ssh/SSHFileUploader.java
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plugins/uploaders/ssh/src/test/java/imagej/updater/ssh/SSHDeleter.java
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plugins/uploaders/webdav/.factorypath
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plugins/uploaders/webdav/src/main/java/imagej/updater/webdav/WebDAVUploader.java
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plugins/uploaders/webdav/src/test/java/imagej/updater/webdav/WebDAVUpdaterITCase.java
plugins/uploaders/webdav/src/test/resources/imagej/updater/webdav/netrc.for-testing
pom.xml
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ui/awt-swing/common/src/main/java/imagej/ui/common/awt/AWTDragAndDropData.java
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ui/awt-swing/util/src/main/java/imagej/util/awt/AWTImageTools.java
ui/awt-swing/util/src/main/java/imagej/util/awt/AWTWindows.java
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ui/swing/commands/pom.xml
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ui/swing/commands/src/main/java/imagej/ui/swing/commands/OverlayManager.java
ui/swing/commands/src/main/java/imagej/ui/swing/commands/StatisticsComputer.java
ui/swing/commands/src/main/java/imagej/ui/swing/commands/SwingScriptRecorder.java
ui/swing/commands/src/main/java/imagej/ui/swing/commands/debug/DialogPromptDemo.java
ui/swing/commands/src/main/java/imagej/ui/swing/commands/debug/InspectObjects.java
ui/swing/commands/src/main/java/imagej/ui/swing/commands/debug/WatchEvents.java
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ui/swing/script-editor/pom.xml
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ui/swing/script-editor/src/main/java/imagej/script/editor/ErrorHandler.java
ui/swing/script-editor/src/main/java/imagej/script/editor/ExceptionHandler.java
ui/swing/script-editor/src/main/java/imagej/script/editor/FileFunctions.java
ui/swing/script-editor/src/main/java/imagej/script/editor/FindAndReplaceDialog.java
ui/swing/script-editor/src/main/java/imagej/script/editor/ImageJMacroTokenMaker.java
ui/swing/script-editor/src/main/java/imagej/script/editor/JTextAreaOutputStream.java
ui/swing/script-editor/src/main/java/imagej/script/editor/JTextAreaWriter.java
ui/swing/script-editor/src/main/java/imagej/script/editor/MacroFunctions.java
ui/swing/script-editor/src/main/java/imagej/script/editor/MatlabTokenMaker.java
ui/swing/script-editor/src/main/java/imagej/script/editor/RecentFilesMenuItem.java
ui/swing/script-editor/src/main/java/imagej/script/editor/ScriptEditor.java
ui/swing/script-editor/src/main/java/imagej/script/editor/TextEditor.java
ui/swing/script-editor/src/main/java/imagej/script/editor/TokenFunctions.java
ui/swing/script-editor/src/main/java/imagej/script/editor/command/ChooseFontSize.java
ui/swing/script-editor/src/main/java/imagej/script/editor/command/ChooseTabSize.java
ui/swing/script-editor/src/main/java/imagej/script/editor/command/GitGrep.java
ui/swing/script-editor/src/main/java/imagej/script/editor/command/KillScript.java
ui/swing/script-editor/src/main/java/imagej/script/editor/command/NewPlugin.java
ui/swing/tools/.factorypath
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ui/swing/tools/pom.xml
ui/swing/tools/src/main/java/imagej/ui/swing/tools/SwingAngleTool.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/SwingEllipseTool.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/SwingLineTool.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/SwingPointTool.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/SwingPolygonTool.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/SwingRectangleTool.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/SwingTextTool.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/AngleJHotDrawAdapter.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/BezierPathFunctions.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/DefaultJHotDrawAdapter.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/EllipseJHotDrawAdapter.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/GeneralPathFigure.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/GeneralPathJHotDrawAdapter.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/LineJHotDrawAdapter.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/PointFigure.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/PointHandle.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/PointJHotDrawOverlay.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/PolygonFigure.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/PolygonJHotDrawAdapter.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/PolygonNodeHandle.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/RectangleJHotDrawAdapter.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/ThresholdFigure.java
ui/swing/tools/src/main/java/imagej/ui/swing/tools/overlay/ThresholdJHotDrawAdapter.java
ui/swing/tools/src/main/resources/icons/tools/angle.png
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ui/swing/tools/src/main/resources/icons/tools/oval.png
ui/swing/tools/src/main/resources/icons/tools/point.png
ui/swing/tools/src/main/resources/icons/tools/polygon.png
ui/swing/tools/src/main/resources/icons/tools/rectangle.png
ui/swing/tools/src/main/resources/icons/tools/text.png
ui/swing/updater/.factorypath
ui/swing/updater/.settings/org.eclipse.jdt.apt.core.prefs
ui/swing/updater/LICENSE.txt
ui/swing/updater/pom.xml
ui/swing/updater/src/main/java/imagej/updater/gui/ConflictDialog.java
ui/swing/updater/src/main/java/imagej/updater/gui/DiffFile.java
ui/swing/updater/src/main/java/imagej/updater/gui/DiffView.java
ui/swing/updater/src/main/java/imagej/updater/gui/FileDetails.java
ui/swing/updater/src/main/java/imagej/updater/gui/FileTable.java
ui/swing/updater/src/main/java/imagej/updater/gui/ImageJUpdater.java
ui/swing/updater/src/main/java/imagej/updater/gui/ProgressDialog.java
ui/swing/updater/src/main/java/imagej/updater/gui/ResolveDependencies.java
ui/swing/updater/src/main/java/imagej/updater/gui/SitesDialog.java
ui/swing/updater/src/main/java/imagej/updater/gui/SwingAuthenticator.java
ui/swing/updater/src/main/java/imagej/updater/gui/SwingTools.java
ui/swing/updater/src/main/java/imagej/updater/gui/SwingUserInterface.java
ui/swing/updater/src/main/java/imagej/updater/gui/UpdaterFrame.java
ui/swing/updater/src/main/java/imagej/updater/gui/ViewOptions.java
ui/swing/updater/src/test/java/imagej/updater/core/UpdaterGUITest.java
ui/swing/util/.factorypath
ui/swing/util/LICENSE.txt
ui/swing/util/pom.xml
ui/swing/util/src/main/java/imagej/util/swing/SwingDialog.java
ui/swing/util/src/main/java/imagej/util/swing/SwingUtils.java
ui/swing/util/src/main/java/imagej/util/swing/tree/CheckBoxNodeData.java
ui/swing/util/src/main/java/imagej/util/swing/tree/CheckBoxNodeEditor.java
ui/swing/util/src/main/java/imagej/util/swing/tree/CheckBoxNodePanel.java
ui/swing/util/src/main/java/imagej/util/swing/tree/CheckBoxNodeRenderer.java
ui/swing/util/src/test/java/imagej/util/swing/tree/CheckBoxTreeSample.java

Download

Click the following link to download imagej-master.zip.

imagej-master.zip









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